AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0185640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0185640 MtrunA17_Chr4g0053951 94.048 420 4 2 1 400 1 419 0.0 809
Msa0185640 MtrunA17_Chr5g0401371 79.827 347 50 1 74 400 68 414 0.0 571
Msa0185640 MtrunA17_Chr4g0053821 75.623 361 64 2 64 400 28 388 0.0 532
Msa0185640 MtrunA17_Chr1g0187371 28.746 327 166 11 109 389 6 311 1.71e-37 138
Msa0185640 MtrunA17_Chr4g0002001 27.950 322 164 9 119 389 2 306 8.25e-36 133
Msa0185640 MtrunA17_Chr8g0350311 30.671 313 160 12 121 395 139 432 4.85e-35 134
Msa0185640 MtrunA17_Chr2g0293491 30.392 306 169 9 118 392 1 293 2.17e-34 129
Msa0185640 MtrunA17_Chr8g0358921 28.616 318 176 9 119 399 45 348 7.14e-33 126
Msa0185640 MtrunA17_Chr4g0051261 29.836 305 170 9 119 392 2 293 1.29e-32 124
Msa0185640 MtrunA17_Chr2g0320011 29.180 305 167 10 120 390 87 376 1.68e-32 127
Msa0185640 MtrunA17_Chr3g0131861 29.766 299 169 10 119 387 95 382 1.74e-32 128
Msa0185640 MtrunA17_Chr7g0273601 29.766 299 169 9 119 387 105 392 1.75e-32 128
Msa0185640 MtrunA17_Chr2g0284091 28.571 308 165 11 120 390 39 328 2.36e-32 125
Msa0185640 MtrunA17_Chr8g0387401 27.451 306 169 9 124 392 55 344 3.01e-32 125
Msa0185640 MtrunA17_Chr2g0277011 30.033 303 155 12 127 391 96 379 8.03e-32 125
Msa0185640 MtrunA17_Chr7g0270371 29.412 306 167 10 120 391 74 364 9.45e-32 124
Msa0185640 MtrunA17_Chr1g0194201 29.412 306 167 10 120 391 74 364 4.32e-31 122
Msa0185640 MtrunA17_Chr1g0191221 30.100 299 168 10 119 387 120 407 5.37e-31 124
Msa0185640 MtrunA17_Chr4g0061141 31.126 302 159 13 119 386 103 389 1.24e-30 124
Msa0185640 MtrunA17_Chr1g0193081 29.316 307 166 11 120 391 74 364 5.08e-30 119
Msa0185640 MtrunA17_Chr7g0218071 30.435 299 168 10 119 387 118 406 1.00e-29 121
Msa0185640 MtrunA17_Chr6g0453711 29.373 303 169 13 119 389 108 397 1.72e-29 120
Msa0185640 MtrunA17_Chr2g0317501 28.094 299 174 11 119 387 132 419 2.50e-29 120
Msa0185640 MtrunA17_Chr4g0045841 27.124 306 169 9 124 392 58 346 4.75e-29 116
Msa0185640 MtrunA17_Chr7g0246591 26.923 338 189 12 96 391 109 430 6.27e-29 117
Msa0185640 MtrunA17_Chr5g0397261 26.885 305 172 9 124 392 44 333 1.56e-28 115
Msa0185640 MtrunA17_Chr2g0286421 29.097 299 171 11 119 387 100 387 2.16e-28 116
Msa0185640 MtrunA17_Chr4g0066691 27.759 299 175 10 119 387 102 389 2.21e-28 116
Msa0185640 MtrunA17_Chr8g0348481 25.902 305 175 8 124 392 40 329 2.77e-28 114
Msa0185640 MtrunA17_Chr8g0385971 28.094 299 174 9 119 387 88 375 3.15e-28 116
Msa0185640 MtrunA17_Chr2g0324461 28.859 298 169 10 121 387 141 426 6.08e-28 115
Msa0185640 MtrunA17_Chr6g0483151 28.571 294 159 11 127 387 20 295 7.15e-28 114
Msa0185640 MtrunA17_Chr7g0248461 27.333 300 177 10 124 392 41 330 9.94e-28 112
Msa0185640 MtrunA17_Chr5g0409421 26.115 314 181 11 119 399 2 297 1.12e-27 114
Msa0185640 MtrunA17_Chr4g0030231 27.000 300 178 9 124 392 43 332 1.58e-27 112
Msa0185640 MtrunA17_Chr4g0030151 28.000 300 175 10 124 392 42 331 2.46e-27 111
Msa0185640 MtrunA17_Chr4g0040141 28.428 299 173 11 119 387 127 414 2.93e-27 114
Msa0185640 MtrunA17_Chr1g0201571 31.416 226 120 7 119 313 124 345 3.92e-27 113
Msa0185640 MtrunA17_Chr5g0396361 27.759 299 175 12 119 387 138 425 9.57e-27 112
Msa0185640 MtrunA17_Chr3g0141871 28.904 301 166 12 121 386 32 319 4.21e-26 108
Msa0185640 MtrunA17_Chr5g0443351 28.616 318 177 12 114 393 15 320 5.33e-26 109
Msa0185640 MtrunA17_Chr8g0378831 28.667 300 168 12 121 386 32 319 6.20e-26 107
Msa0185640 MtrunA17_Chr6g0482681 29.338 317 178 12 113 393 81 387 7.18e-26 109
Msa0185640 MtrunA17_Chr3g0099951 27.759 299 161 13 127 389 20 299 1.20e-25 107
Msa0185640 MtrunA17_Chr8g0383451 32.618 233 117 9 127 326 4 229 2.71e-25 107
Msa0185640 MtrunA17_Chr8g0359091 28.840 319 177 12 113 393 18 324 3.86e-25 107
Msa0185640 MtrunA17_Chr4g0065851 27.356 329 192 13 101 393 6 323 4.23e-25 107
Msa0185640 MtrunA17_Chr8g0369451 24.503 302 170 9 121 386 4 283 5.23e-25 106
Msa0185640 MtrunA17_Chr3g0096631 28.797 316 179 12 114 393 18 323 6.03e-25 107
Msa0185640 MtrunA17_Chr8g0392811 26.498 317 187 12 113 393 109 415 9.49e-25 106
Msa0185640 MtrunA17_Chr2g0287271 27.052 329 193 13 101 393 6 323 2.20e-24 105
Msa0185640 MtrunA17_Chr3g0102571 34.054 185 112 5 203 386 191 366 3.18e-24 103
Msa0185640 MtrunA17_Chr3g0122781 28.311 219 134 6 187 389 514 725 1.94e-23 102
Msa0185640 MtrunA17_Chr3g0130781 28.086 324 174 13 114 386 13 328 3.70e-23 100
Msa0185640 MtrunA17_Chr7g0274941 25.000 308 154 10 114 386 9 274 5.30e-23 98.2
Msa0185640 MtrunA17_Chr8g0339221 25.926 297 175 10 121 387 4 285 5.72e-23 100
Msa0185640 MtrunA17_Chr4g0057791 32.474 194 110 6 203 386 329 511 1.21e-22 99.8
Msa0185640 MtrunA17_Chr8g0377071 32.000 200 109 8 203 389 494 679 1.26e-22 100
Msa0185640 MtrunA17_Chr3g0093391 26.837 313 173 12 119 386 21 322 1.79e-22 99.4
Msa0185640 MtrunA17_Chr3g0127571 25.246 305 159 8 121 392 138 406 4.03e-22 98.6
Msa0185640 MtrunA17_Chr7g0256001 24.331 411 211 13 24 386 45 403 4.73e-22 98.2
Msa0185640 MtrunA17_Chr3g0093571 26.562 320 165 12 119 386 23 324 5.69e-22 97.8
Msa0185640 MtrunA17_Chr4g0059951 24.599 374 186 13 47 386 20 331 9.44e-21 94.4
Msa0185640 MtrunA17_Chr7g0276111 24.205 409 186 17 46 386 54 406 1.83e-20 93.6
Msa0185640 MtrunA17_Chr3g0102601 32.065 184 101 5 203 386 45 204 3.52e-20 89.4
Msa0185640 MtrunA17_Chr7g0257751 25.987 304 142 9 121 386 58 316 1.02e-19 90.9
Msa0185640 MtrunA17_Chr1g0190131 24.658 292 158 10 121 386 9 264 3.19e-19 87.0
Msa0185640 MtrunA17_Chr4g0030241 35.135 111 70 2 203 313 12 120 9.07e-19 83.6
Msa0185640 MtrunA17_Chr2g0314321 26.506 332 181 13 115 393 19 340 2.28e-18 87.0
Msa0185640 MtrunA17_Chr4g0074811 25.667 300 148 10 121 386 91 349 3.95e-18 86.3
Msa0185640 MtrunA17_Chr4g0074791 25.203 369 184 14 51 386 45 354 1.23e-17 84.7
Msa0185640 MtrunA17_Chr1g0157131 26.102 295 153 10 121 386 74 332 2.78e-17 83.6
Msa0185640 MtrunA17_Chr7g0267771 23.986 296 156 8 121 385 88 345 3.66e-17 83.2
Msa0185640 MtrunA17_Chr1g0176751 25.424 295 155 9 121 386 124 382 5.23e-17 82.8
Msa0185640 MtrunA17_Chr3g0116701 24.478 335 175 16 121 386 94 419 1.01e-16 81.6
Msa0185640 MtrunA17_Chr4g0008561 24.749 299 157 9 120 388 18 278 1.43e-16 81.6
Msa0185640 MtrunA17_Chr8g0385341 28.019 207 112 6 121 295 30 231 1.45e-16 81.3
Msa0185640 MtrunA17_Chr1g0170281 23.214 336 178 10 83 386 89 376 4.23e-16 80.1
Msa0185640 MtrunA17_Chr3g0130151 22.185 302 161 9 127 397 250 508 6.08e-16 79.7
Msa0185640 MtrunA17_Chr7g0242561 23.432 303 157 9 118 386 53 314 8.52e-16 79.0
Msa0185640 MtrunA17_Chr4g0001331 27.404 208 114 8 119 294 18 220 3.28e-15 77.0
Msa0185640 MtrunA17_Chr7g0267751 24.068 295 159 9 121 386 135 393 3.74e-15 77.4
Msa0185640 MtrunA17_Chr2g0286501 28.936 235 124 9 108 306 30 257 4.32e-15 77.4
Msa0185640 MtrunA17_Chr8g0351491 26.341 205 115 7 119 294 14 211 7.41e-15 74.3
Msa0185640 MtrunA17_Chr5g0432471 26.961 204 116 9 121 294 12 212 1.43e-14 75.1
Msa0185640 MtrunA17_Chr1g0205421 26.442 208 114 9 121 295 12 213 2.44e-14 74.3
Msa0185640 MtrunA17_Chr4g0063881 28.293 205 111 8 121 294 11 210 6.28e-14 73.2
Msa0185640 MtrunA17_Chr1g0190831 23.333 300 159 8 119 388 2 260 7.02e-14 73.2
Msa0185640 MtrunA17_Chr4g0013131 27.536 207 111 9 121 294 12 212 1.25e-13 72.4
Msa0185640 MtrunA17_Chr3g0140631 25.000 220 127 8 119 307 35 247 1.62e-13 70.9
Msa0185640 MtrunA17_Chr8g0346071 26.699 206 113 8 121 294 17 216 4.14e-13 70.5
Msa0185640 MtrunA17_Chr8g0390341 32.836 134 83 3 254 387 288 414 4.39e-13 70.5
Msa0185640 MtrunA17_Chr8g0353621 24.878 205 118 7 119 294 8 205 4.52e-13 68.9
Msa0185640 MtrunA17_Chr8g0346081 25.854 205 116 7 121 294 17 216 5.20e-13 70.1
Msa0185640 MtrunA17_Chr3g0107011 25.439 228 128 11 121 316 14 231 6.15e-13 70.1
Msa0185640 MtrunA17_Chr8g0345801 25.110 227 132 8 120 316 14 232 6.49e-13 68.6
Msa0185640 MtrunA17_Chr5g0441011 26.923 208 112 9 121 294 13 214 7.23e-13 69.7
Msa0185640 MtrunA17_Chr1g0150321 27.830 212 114 8 121 300 13 217 1.10e-12 69.3
Msa0185640 MtrunA17_Chr6g0486031 32.090 134 84 3 254 387 275 401 1.38e-12 68.9
Msa0185640 MtrunA17_Chr5g0419441 21.534 339 191 12 77 386 201 493 1.53e-12 69.3
Msa0185640 MtrunA17_Chr2g0284011 27.317 205 114 9 121 294 12 212 1.55e-12 68.9
Msa0185640 MtrunA17_Chr3g0139371 22.024 336 181 14 121 386 74 398 2.19e-12 68.2
Msa0185640 MtrunA17_Chr1g0170551 28.571 217 115 9 116 301 2 209 2.55e-12 68.9
Msa0185640 MtrunA17_Chr2g0333821 26.442 208 116 8 119 294 12 214 2.68e-12 68.2
Msa0185640 MtrunA17_Chr7g0244521 25.877 228 125 11 121 315 12 228 2.83e-12 68.2
Msa0185640 MtrunA17_Chr2g0284031 26.941 219 118 10 109 294 22 231 2.99e-12 68.2
Msa0185640 MtrunA17_Chr3g0132591 23.183 289 163 8 119 386 110 360 3.12e-12 67.8
Msa0185640 MtrunA17_Chr7g0272841 24.444 225 123 10 127 313 74 289 1.03e-11 66.6
Msa0185640 MtrunA17_Chr3g0114511 23.415 205 122 7 121 295 32 231 1.72e-11 65.5
Msa0185640 MtrunA17_Chr3g0125381 28.750 160 84 6 174 307 10 165 2.11e-11 63.2
Msa0185640 MtrunA17_Chr2g0304111 25.854 205 118 9 121 294 23 224 2.47e-11 65.1
Msa0185640 MtrunA17_Chr1g0166101 25.604 207 116 8 121 294 24 225 3.03e-11 64.7
Msa0185640 MtrunA17_Chr5g0402601 25.177 282 145 15 51 294 326 579 4.05e-11 64.7
Msa0185640 MtrunA17_Chr1g0210061 35.922 103 61 4 203 304 726 824 4.08e-11 65.1
Msa0185640 MtrunA17_Chr5g0432491 25.962 208 114 9 121 294 23 224 5.37e-11 63.9
Msa0185640 MtrunA17_Chr4g0074111 24.510 204 121 8 121 294 18 218 6.97e-11 63.5
Msa0185640 MtrunA17_Chr8g0379091 26.570 207 113 9 121 294 26 226 7.27e-11 63.9
Msa0185640 MtrunA17_Chr5g0444181 24.737 190 91 6 95 248 74 247 7.64e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0185640 AT2G23070.1 85.756 344 29 1 74 397 85 428 0.0 578
Msa0185640 AT5G67380.1 79.042 334 50 1 87 400 76 409 0.0 523
Msa0185640 AT3G50000.1 79.518 332 48 1 89 400 72 403 0.0 522
Msa0185640 AT2G23080.1 77.039 331 56 1 89 399 2 332 7.25e-178 498
Msa0185640 AT5G67380.2 71.257 334 43 2 87 400 76 376 2.56e-174 491
Msa0185640 AT2G23080.2 77.778 297 46 1 89 365 2 298 8.51e-157 444
Msa0185640 AT2G38620.2 29.268 328 152 10 119 389 2 306 4.04e-37 137
Msa0185640 AT3G54180.1 28.834 326 154 10 119 389 2 304 5.92e-36 134
Msa0185640 AT1G20930.1 29.618 314 160 12 119 389 14 309 6.17e-36 134
Msa0185640 AT3G48750.1 30.464 302 166 10 119 389 2 290 1.33e-35 132
Msa0185640 AT1G76540.1 29.154 319 155 12 119 389 12 307 8.43e-35 131
Msa0185640 AT2G38620.4 30.216 278 152 8 119 389 2 244 1.57e-34 128
Msa0185640 AT4G00720.1 29.395 347 187 12 96 399 106 437 5.10e-34 132
Msa0185640 AT3G61160.1 29.126 309 170 10 121 395 102 395 3.67e-33 129
Msa0185640 AT3G61160.4 29.126 309 170 10 121 395 102 395 4.55e-33 129
Msa0185640 AT2G30980.1 30.164 305 164 10 120 390 71 360 5.94e-33 128
Msa0185640 AT3G61160.2 29.126 309 170 10 121 395 109 402 6.11e-33 128
Msa0185640 AT1G74330.3 29.610 385 191 17 67 387 40 408 7.49e-33 130
Msa0185640 AT5G14640.1 30.065 306 165 10 120 391 73 363 7.71e-33 127
Msa0185640 AT5G14640.2 30.065 306 165 10 120 391 73 363 7.71e-33 127
Msa0185640 AT1G06390.2 29.836 305 165 10 120 390 69 358 8.22e-33 127
Msa0185640 AT1G06390.1 29.836 305 165 10 120 390 69 358 8.22e-33 127
Msa0185640 AT1G74330.1 29.610 385 191 17 67 387 40 408 1.11e-32 130
Msa0185640 AT1G74330.2 29.610 385 191 17 67 387 40 408 1.42e-32 130
Msa0185640 AT1G73690.1 28.283 297 156 10 127 387 17 292 8.31e-32 124
Msa0185640 AT5G50860.2 29.293 297 169 10 121 387 114 399 2.98e-31 124
Msa0185640 AT4G18710.1 28.758 306 167 11 120 390 39 328 3.12e-31 122
Msa0185640 AT5G50860.1 29.293 297 169 10 121 387 114 399 3.26e-31 125
Msa0185640 AT3G59790.1 29.545 308 159 11 124 392 63 351 6.07e-31 122
Msa0185640 AT5G26751.1 28.758 306 169 10 120 391 68 358 5.78e-30 120
Msa0185640 AT4G10010.2 27.759 299 175 10 119 387 154 441 9.15e-30 121
Msa0185640 AT1G18040.1 28.866 291 162 10 127 387 18 293 1.07e-29 119
Msa0185640 AT1G18670.2 30.263 304 164 12 119 387 129 419 1.12e-29 121
Msa0185640 AT3G05840.2 28.431 306 170 10 120 391 72 362 1.23e-29 119
Msa0185640 AT3G05840.1 28.431 306 170 10 120 391 72 362 1.23e-29 119
Msa0185640 AT1G18670.3 29.934 304 165 12 119 387 129 419 1.44e-29 121
Msa0185640 AT1G18670.1 30.263 304 164 12 119 387 129 419 1.83e-29 120
Msa0185640 AT1G54610.1 27.327 333 184 13 102 387 82 403 3.07e-29 119
Msa0185640 AT1G54610.3 27.327 333 184 13 102 387 82 403 3.07e-29 119
Msa0185640 AT1G54610.2 27.327 333 184 13 102 387 82 403 3.07e-29 119
Msa0185640 AT1G53050.2 29.431 299 170 12 119 387 132 419 3.67e-29 120
Msa0185640 AT1G53050.1 29.431 299 170 12 119 387 132 419 3.67e-29 120
Msa0185640 AT1G09840.3 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa0185640 AT1G09840.7 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa0185640 AT1G09840.10 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa0185640 AT1G09840.6 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa0185640 AT1G09840.4 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa0185640 AT1G09840.1 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa0185640 AT1G09840.9 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa0185640 AT1G09840.5 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa0185640 AT1G09840.8 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa0185640 AT1G09840.2 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa0185640 AT5G39420.1 27.852 298 174 11 119 386 103 389 1.15e-28 118
Msa0185640 AT1G57870.3 28.053 303 161 12 127 391 88 371 2.45e-28 115
Msa0185640 AT1G57870.1 28.053 303 161 12 127 391 88 371 2.54e-28 115
Msa0185640 AT1G57870.4 28.053 303 161 12 127 391 88 371 2.54e-28 115
Msa0185640 AT1G57870.2 28.053 303 161 12 127 391 88 371 2.54e-28 115
Msa0185640 AT3G01085.1 29.801 302 166 11 119 387 113 401 2.61e-28 117
Msa0185640 AT3G01085.2 29.801 302 166 11 119 387 113 401 2.61e-28 117
Msa0185640 AT3G01085.3 29.801 302 166 11 119 387 113 401 2.78e-28 117
Msa0185640 AT4G01370.1 26.667 300 179 10 124 392 46 335 1.13e-27 113
Msa0185640 AT4G19110.1 26.000 300 172 11 119 386 2 283 1.21e-27 114
Msa0185640 AT4G19110.2 26.000 300 172 11 119 386 2 283 1.36e-27 114
Msa0185640 AT1G09840.11 32.143 196 109 6 204 391 66 245 1.67e-27 110
Msa0185640 AT2G38620.3 29.615 260 121 9 119 324 2 253 2.71e-27 109
Msa0185640 AT2G38620.1 29.615 260 121 9 119 324 2 253 2.71e-27 109
Msa0185640 AT3G61160.5 28.421 285 155 10 127 377 108 377 3.19e-27 112
Msa0185640 AT5G45430.2 27.000 300 165 11 121 386 4 283 3.81e-27 113
Msa0185640 AT2G43790.1 26.797 306 170 11 124 392 66 354 4.04e-27 111
Msa0185640 AT5G45430.1 27.000 300 165 11 121 386 4 283 4.51e-27 112
Msa0185640 AT4G10010.1 29.249 253 143 9 160 387 20 261 5.36e-27 112
Msa0185640 AT1G10210.2 27.961 304 171 12 121 389 32 322 6.76e-27 110
Msa0185640 AT1G10210.3 27.961 304 171 12 121 389 32 322 6.76e-27 110
Msa0185640 AT1G10210.1 27.961 304 171 12 121 389 32 322 6.76e-27 110
Msa0185640 AT4G22940.1 27.832 309 175 11 113 386 93 388 7.58e-27 112
Msa0185640 AT4G13020.1 26.710 307 178 9 121 393 4 297 7.77e-27 111
Msa0185640 AT4G13020.6 26.871 294 175 8 121 387 4 284 7.88e-27 110
Msa0185640 AT4G11330.1 27.333 300 177 10 124 392 46 335 8.13e-27 110
Msa0185640 AT1G66750.1 27.852 298 172 9 119 387 11 294 8.55e-27 110
Msa0185640 AT4G13020.4 26.710 307 178 9 121 393 4 297 8.59e-27 110
Msa0185640 AT4G13020.2 26.710 307 178 9 121 393 12 305 1.06e-26 111
Msa0185640 AT4G13020.3 26.710 307 178 9 121 393 12 305 1.07e-26 111
Msa0185640 AT1G01560.2 26.936 297 176 10 124 389 43 329 1.09e-26 110
Msa0185640 AT4G22940.2 27.832 309 175 11 113 386 93 388 1.12e-26 112
Msa0185640 AT4G13020.7 26.871 294 175 8 121 387 4 284 1.42e-26 110
Msa0185640 AT1G07880.2 26.230 305 174 9 124 392 36 325 1.61e-26 109
Msa0185640 AT2G46070.1 27.333 300 177 10 124 392 44 333 2.10e-26 109
Msa0185640 AT1G71530.2 26.421 299 179 9 119 387 145 432 2.39e-26 110
Msa0185640 AT2G46070.3 27.333 300 177 10 124 392 78 367 2.43e-26 109
Msa0185640 AT1G03740.2 27.362 307 178 12 113 386 203 497 4.00e-26 111
Msa0185640 AT1G03740.1 27.362 307 178 12 113 386 203 497 4.49e-26 110
Msa0185640 AT4G13020.5 25.633 316 179 9 121 393 4 306 1.01e-25 108
Msa0185640 AT1G71530.1 26.421 299 179 9 119 387 145 432 1.11e-25 109
Msa0185640 AT1G71530.3 26.621 293 174 9 119 381 145 426 1.56e-25 107
Msa0185640 AT5G44290.7 27.027 296 175 9 121 386 137 421 1.57e-25 108
Msa0185640 AT2G01450.3 28.261 322 185 12 113 398 8 319 1.73e-25 108
Msa0185640 AT2G01450.1 28.261 322 185 12 113 398 8 319 1.73e-25 108
Msa0185640 AT2G01450.2 28.261 322 185 12 113 398 8 319 1.73e-25 108
Msa0185640 AT2G01450.4 28.261 322 185 12 113 398 8 319 1.73e-25 108
Msa0185640 AT4G13020.8 25.743 303 176 8 121 387 4 293 1.75e-25 107
Msa0185640 AT5G44290.6 27.027 296 175 9 121 386 137 421 1.80e-25 108
Msa0185640 AT5G44290.2 27.365 296 174 10 121 386 137 421 3.28e-25 108
Msa0185640 AT5G44290.5 27.365 296 174 10 121 386 137 421 3.28e-25 108
Msa0185640 AT5G44290.4 27.365 296 174 10 121 386 137 421 3.28e-25 108
Msa0185640 AT5G44290.1 27.365 296 174 10 121 386 137 421 3.28e-25 108
Msa0185640 AT5G44290.3 27.365 296 174 10 121 386 137 421 3.28e-25 108
Msa0185640 AT2G18170.1 26.948 308 177 12 121 391 32 328 3.39e-25 105
Msa0185640 AT1G67580.1 28.797 316 161 13 119 389 404 700 3.51e-25 108
Msa0185640 AT1G67580.2 28.797 316 161 13 119 389 404 700 3.51e-25 108
Msa0185640 AT1G59580.2 28.013 307 167 12 121 389 32 322 4.36e-25 105
Msa0185640 AT1G59580.1 28.013 307 167 12 121 389 32 322 4.36e-25 105
Msa0185640 AT2G42880.2 28.254 315 180 12 115 393 19 323 7.79e-25 106
Msa0185640 AT1G33770.1 29.778 225 125 7 119 313 139 360 7.95e-25 107
Msa0185640 AT2G42880.1 28.254 315 180 12 115 393 19 323 1.04e-24 106
Msa0185640 AT3G45640.1 27.491 291 170 8 127 386 44 324 2.03e-24 103
Msa0185640 AT1G09600.1 27.852 298 174 11 119 386 161 447 2.39e-24 105
Msa0185640 AT5G64960.1 26.100 341 189 13 91 386 3 325 3.61e-24 104
Msa0185640 AT1G73670.1 26.518 313 184 12 113 389 82 384 4.25e-24 104
Msa0185640 AT3G14720.1 28.707 317 180 12 113 393 17 323 4.81e-24 104
Msa0185640 AT4G36450.1 26.250 320 173 12 121 395 32 333 5.39e-24 102
Msa0185640 AT5G10270.1 25.740 338 188 12 94 386 6 325 6.76e-24 103
Msa0185640 AT3G61160.3 29.817 218 118 7 127 313 108 321 8.26e-24 101
Msa0185640 AT3G14720.2 28.707 317 180 12 113 393 17 323 1.07e-23 102
Msa0185640 AT3G14720.3 28.707 317 180 12 113 393 17 323 1.07e-23 102
Msa0185640 AT3G61160.6 29.817 218 118 7 127 313 115 328 1.44e-23 101
Msa0185640 AT3G05050.3 28.980 245 124 9 119 325 136 368 1.63e-23 103
Msa0185640 AT3G05050.2 28.980 245 124 9 119 325 136 368 1.63e-23 103
Msa0185640 AT3G05050.1 28.980 245 124 9 119 325 136 368 1.63e-23 103
Msa0185640 AT4G19110.3 25.630 238 138 7 174 386 4 227 4.54e-23 100
Msa0185640 AT5G19010.1 26.498 317 187 12 113 393 17 323 9.04e-23 100
Msa0185640 AT1G71530.4 29.187 209 115 6 119 297 145 350 1.70e-22 98.2
Msa0185640 AT1G53510.1 26.582 316 188 10 113 393 17 323 2.91e-22 99.4
Msa0185640 AT3G18040.5 27.500 320 180 13 113 393 10 316 5.47e-22 98.2
Msa0185640 AT5G63370.2 24.921 317 177 11 119 389 161 462 5.63e-22 97.8
Msa0185640 AT5G63370.3 24.921 317 177 11 119 389 161 462 5.63e-22 97.8
Msa0185640 AT3G18040.4 27.500 320 180 13 113 393 124 430 5.89e-22 98.6
Msa0185640 AT3G18040.1 27.500 320 180 13 113 393 15 321 6.08e-22 98.2
Msa0185640 AT1G01560.3 26.224 286 170 10 124 378 43 318 6.23e-22 96.3
Msa0185640 AT3G18040.3 27.500 320 180 13 113 393 124 430 7.67e-22 98.2
Msa0185640 AT5G63370.7 24.921 317 177 11 119 389 295 596 8.33e-22 97.8
Msa0185640 AT5G63370.8 24.921 317 177 11 119 389 295 596 8.33e-22 97.8
Msa0185640 AT5G63370.4 24.921 317 177 11 119 389 295 596 8.33e-22 97.8
Msa0185640 AT5G63370.6 24.921 317 177 11 119 389 295 596 8.33e-22 97.8
Msa0185640 AT5G63370.1 24.921 317 177 11 119 389 295 596 8.33e-22 97.8
Msa0185640 AT2G46070.2 26.950 282 165 10 124 374 44 315 9.42e-22 95.5
Msa0185640 AT4G18710.2 28.889 225 125 7 120 313 33 253 1.01e-21 94.4
Msa0185640 AT3G53570.1 23.952 334 183 11 121 387 115 444 3.36e-21 95.5
Msa0185640 AT3G53570.4 23.952 334 183 11 121 387 115 444 3.36e-21 95.5
Msa0185640 AT3G53570.2 23.952 334 183 11 121 387 115 444 3.36e-21 95.5
Msa0185640 AT3G53570.3 23.952 334 183 11 121 387 101 430 3.88e-21 95.1
Msa0185640 AT3G53570.5 23.952 334 183 11 121 387 101 430 3.88e-21 95.1
Msa0185640 AT1G57700.1 28.444 225 128 7 119 313 144 365 9.15e-21 95.1
Msa0185640 AT2G41140.1 24.129 373 190 15 56 386 64 385 9.72e-21 94.7
Msa0185640 AT5G63610.1 28.261 322 174 16 114 386 20 333 1.01e-20 94.4
Msa0185640 AT5G12480.1 24.731 372 180 14 53 386 8 317 2.38e-20 93.6
Msa0185640 AT3G57530.2 25.234 321 159 11 118 398 60 339 2.84e-20 92.4
Msa0185640 AT1G07880.1 28.111 217 123 7 124 310 36 249 6.02e-20 89.0
Msa0185640 AT2G41860.1 25.472 318 156 11 121 398 54 330 7.13e-20 92.0
Msa0185640 AT5G64960.2 29.057 265 137 11 162 386 19 272 7.15e-20 91.7
Msa0185640 AT2G41860.2 25.472 318 156 11 121 398 54 330 1.14e-19 91.3
Msa0185640 AT3G57530.1 25.472 318 156 11 121 398 63 339 1.27e-19 91.3
Msa0185640 AT5G24430.1 24.756 307 152 10 118 386 140 405 2.32e-19 90.5
Msa0185640 AT1G01560.4 27.650 217 124 7 124 310 43 256 3.37e-19 87.4
Msa0185640 AT1G01560.1 27.650 217 124 7 124 310 43 256 3.37e-19 87.4
Msa0185640 AT3G19100.1 25.402 311 159 11 118 393 141 413 5.16e-19 89.4
Msa0185640 AT1G18890.1 25.743 303 150 10 118 386 60 321 5.65e-19 89.4
Msa0185640 AT2G46700.1 25.418 299 154 10 121 386 143 405 5.99e-19 89.4
Msa0185640 AT5G63370.9 28.017 232 124 9 119 313 161 386 6.63e-19 88.2
Msa0185640 AT2G38910.1 25.581 301 151 10 118 385 131 391 6.79e-19 89.0
Msa0185640 AT5G63370.5 28.017 232 124 9 119 313 295 520 6.84e-19 89.0
Msa0185640 AT5G63370.10 28.017 232 124 9 119 313 295 520 6.84e-19 89.0
Msa0185640 AT5G12180.1 25.246 305 143 10 121 386 73 331 7.61e-19 89.0
Msa0185640 AT3G49370.1 24.671 304 156 10 118 386 139 404 2.34e-18 87.4
Msa0185640 AT1G76040.3 25.407 307 148 11 121 390 112 374 2.88e-18 87.0
Msa0185640 AT1G76040.2 25.407 307 148 11 121 390 112 374 3.52e-18 87.0
Msa0185640 AT5G19450.2 25.667 300 148 10 121 386 57 315 7.74e-18 85.9
Msa0185640 AT5G19450.1 25.667 300 148 10 121 386 57 315 7.74e-18 85.9
Msa0185640 AT2G37840.1 25.641 312 158 13 120 398 11 281 3.84e-17 84.0
Msa0185640 AT3G53930.1 25.402 311 160 12 120 398 19 289 6.19e-17 83.2
Msa0185640 AT3G53930.2 25.402 311 160 12 120 398 19 289 7.03e-17 83.2
Msa0185640 AT3G18040.2 31.000 200 117 8 203 393 46 233 1.18e-16 81.6
Msa0185640 AT2G46700.2 25.292 257 132 8 154 386 4 224 1.42e-16 81.3
Msa0185640 AT2G46700.3 25.292 257 132 8 154 386 4 224 1.42e-16 81.3
Msa0185640 AT3G51850.3 23.432 303 157 9 118 386 51 312 2.52e-16 80.5
Msa0185640 AT5G04870.1 24.150 294 158 8 121 385 150 407 2.96e-16 81.3
Msa0185640 AT5G57630.2 25.616 203 117 6 121 294 12 209 3.91e-16 80.1
Msa0185640 AT5G57630.1 25.616 203 117 6 121 294 12 209 4.21e-16 80.1
Msa0185640 AT5G39440.1 26.570 207 112 7 120 294 18 216 5.04e-16 80.1
Msa0185640 AT3G50530.2 22.477 436 211 16 29 386 55 441 5.26e-16 80.5
Msa0185640 AT1G53570.1 22.000 300 163 7 127 395 220 479 7.40e-16 79.7
Msa0185640 AT1G53570.4 22.000 300 163 7 127 395 220 479 7.66e-16 79.7
Msa0185640 AT1G53570.2 22.000 300 163 7 127 395 220 479 7.95e-16 79.7
Msa0185640 AT1G53570.3 22.000 300 163 7 127 395 220 479 7.95e-16 79.7
Msa0185640 AT2G25090.1 26.606 218 114 10 119 295 13 225 9.53e-16 79.3
Msa0185640 AT1G53570.6 22.000 300 163 7 127 395 220 479 9.53e-16 79.3
Msa0185640 AT1G53570.7 22.000 300 163 7 127 395 220 479 1.01e-15 79.3
Msa0185640 AT1G54960.1 23.510 302 142 11 127 385 74 329 1.13e-15 79.3
Msa0185640 AT1G54960.2 23.510 302 142 11 127 385 74 329 1.13e-15 79.3
Msa0185640 AT2G45490.2 26.667 210 117 9 114 294 16 217 1.50e-15 76.3
Msa0185640 AT3G51850.1 23.220 323 165 10 118 398 51 332 1.71e-15 78.6
Msa0185640 AT1G08650.1 23.490 298 157 10 121 386 15 273 1.73e-15 76.6
Msa0185640 AT3G51850.2 23.220 323 165 10 118 398 51 332 1.82e-15 78.6
Msa0185640 AT3G04530.1 22.152 316 177 9 111 395 1 278 2.09e-15 76.3
Msa0185640 AT4G04700.1 23.750 320 164 10 121 398 28 309 2.10e-15 78.2
Msa0185640 AT4G32660.1 24.096 332 180 11 121 386 71 396 3.14e-15 77.4
Msa0185640 AT4G32660.3 24.096 332 180 11 121 386 63 388 3.55e-15 77.0
Msa0185640 AT2G45490.1 26.667 210 117 9 114 294 16 217 3.58e-15 75.9
Msa0185640 AT1G12680.1 24.055 291 158 10 119 386 105 355 4.88e-15 77.0
Msa0185640 AT1G50240.3 28.846 260 134 12 119 343 4 247 8.26e-15 77.0
Msa0185640 AT1G50240.2 28.846 260 134 12 119 343 4 247 8.26e-15 77.0
Msa0185640 AT5G12480.2 28.796 191 98 6 198 386 69 223 1.26e-14 75.5
Msa0185640 AT3G01090.3 26.087 207 114 6 120 294 18 217 1.43e-14 75.9
Msa0185640 AT3G01090.1 26.087 207 114 6 120 294 18 217 1.43e-14 75.9
Msa0185640 AT3G01090.2 26.087 207 114 6 120 294 41 240 1.53e-14 75.9
Msa0185640 AT5G21326.1 27.885 208 110 9 121 294 13 214 3.62e-14 74.3
Msa0185640 AT5G23580.1 23.125 320 169 11 101 386 4 280 5.97e-14 73.6
Msa0185640 AT3G06030.1 22.517 302 155 10 127 390 74 334 6.36e-14 73.9
Msa0185640 AT1G09000.2 22.517 302 145 11 127 385 75 330 6.73e-14 73.9
Msa0185640 AT1G08650.2 23.411 299 156 11 121 387 15 272 6.96e-14 72.0
Msa0185640 AT5G25110.1 29.327 208 106 10 121 294 43 243 6.99e-14 73.6
Msa0185640 AT1G01140.2 27.273 209 112 9 120 294 18 220 7.10e-14 73.6
Msa0185640 AT1G01140.1 27.273 209 112 9 120 294 18 220 7.52e-14 73.2
Msa0185640 AT1G09000.1 22.517 302 145 11 127 385 75 330 7.92e-14 73.6
Msa0185640 AT1G01140.3 27.273 209 112 9 120 294 18 220 9.20e-14 73.2
Msa0185640 AT3G63280.4 22.327 318 174 9 102 388 39 314 1.03e-13 73.2
Msa0185640 AT5G10930.1 27.751 209 109 10 121 294 12 213 1.37e-13 72.4
Msa0185640 AT2G26980.2 28.846 208 108 10 121 294 14 215 1.38e-13 70.9
Msa0185640 AT4G32830.1 25.455 220 126 8 119 307 29 241 2.10e-13 70.9
Msa0185640 AT3G63280.2 28.649 185 91 5 205 388 116 260 2.27e-13 72.0
Msa0185640 AT3G63280.3 28.649 185 91 5 205 388 116 260 2.27e-13 72.0
Msa0185640 AT3G63280.1 28.649 185 91 5 205 388 116 260 2.27e-13 72.0
Msa0185640 AT2G26980.1 27.885 208 110 9 121 294 14 215 2.40e-13 71.2
Msa0185640 AT2G26980.3 27.885 208 110 9 121 294 14 215 2.88e-13 71.6
Msa0185640 AT2G26980.4 27.885 208 110 9 121 294 24 225 3.16e-13 71.2
Msa0185640 AT5G18700.1 26.761 213 125 6 119 306 2 208 4.91e-13 71.6
Msa0185640 AT2G26980.5 27.885 208 110 9 121 294 14 215 5.15e-13 70.5
Msa0185640 AT5G01810.3 25.728 206 116 8 121 294 12 212 7.67e-13 69.7
Msa0185640 AT5G01810.1 25.728 206 116 8 121 294 12 212 1.20e-12 69.3
Msa0185640 AT5G01810.2 25.728 206 116 8 121 294 12 212 1.20e-12 69.3
Msa0185640 AT5G21222.1 27.317 205 115 8 121 294 13 214 1.27e-12 70.1
Msa0185640 AT5G21222.2 27.317 205 115 8 121 294 13 214 1.27e-12 70.1
Msa0185640 AT5G21222.4 27.317 205 115 8 121 294 13 214 1.27e-12 70.1
Msa0185640 AT5G21222.3 27.317 205 115 8 121 294 13 214 1.27e-12 70.1
Msa0185640 AT4G32660.4 25.200 250 145 9 173 386 41 284 1.47e-12 68.2
Msa0185640 AT2G30360.1 27.143 210 110 7 121 294 21 223 2.81e-12 68.6
Msa0185640 AT2G25880.1 25.366 205 117 7 119 294 23 220 3.32e-12 67.0
Msa0185640 AT5G58380.1 25.110 227 126 11 119 312 10 225 3.39e-12 68.2
Msa0185640 AT4G18700.1 25.728 206 116 8 121 294 26 226 3.46e-12 68.2
Msa0185640 AT5G35410.2 27.404 208 109 9 121 294 11 210 3.57e-12 67.8
Msa0185640 AT2G25880.4 25.366 205 117 7 119 294 36 233 3.67e-12 67.0
Msa0185640 AT4G24400.2 26.341 205 115 8 121 294 9 208 3.79e-12 67.8
Msa0185640 AT4G24400.1 26.341 205 115 8 121 294 9 208 5.31e-12 67.4
Msa0185640 AT2G25880.3 25.366 205 117 7 119 294 84 281 5.80e-12 67.0
Msa0185640 AT5G35410.1 27.404 208 109 9 121 294 11 210 7.15e-12 67.0
Msa0185640 AT1G30270.1 25.962 208 114 10 121 294 31 232 7.48e-12 67.4
Msa0185640 AT2G38490.1 26.761 213 115 10 121 297 28 235 8.83e-12 67.0
Msa0185640 AT1G30270.2 25.962 208 114 10 121 294 31 232 9.46e-12 67.0
Msa0185640 AT1G07150.2 23.986 296 154 11 127 391 15 270 1.91e-11 65.9
Msa0185640 AT5G45820.1 25.490 204 119 8 121 294 12 212 2.27e-11 65.5
Msa0185640 AT4G14580.1 25.688 218 122 8 110 294 13 223 2.33e-11 65.5
Msa0185640 AT5G45810.1 26.699 206 114 9 121 294 28 228 2.37e-11 65.9
Msa0185640 AT1G07150.1 23.986 296 154 11 127 391 29 284 2.57e-11 65.5
Msa0185640 AT1G69220.1 22.185 302 170 11 121 395 249 512 4.84e-11 65.1
Msa0185640 AT4G30960.1 26.471 204 117 9 121 294 24 224 9.53e-11 63.5

Find 137 sgRNAs with CRISPR-Local

Find 459 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCAAGCAACTTTACAATAT+TGG 0.174324 1_4:+76267901 None:intergenic
CTACTTTCCACATTTCTAAT+TGG 0.197072 1_4:+76263837 None:intergenic
CATGGTCAATCATTACATTA+TGG 0.216955 1_4:+76266704 None:intergenic
TTACGGCCATAAATGGAAAA+TGG 0.221628 1_4:+76270157 None:intergenic
TTGGGGAATTTATTATTATA+AGG 0.235099 1_4:+76270054 None:intergenic
ATCACCTTCTTCTTCTTAAC+AGG 0.265122 1_4:+76269554 None:intergenic
TTTCTAATTGGATTGAAGTA+TGG 0.265994 1_4:+76263849 None:intergenic
TCAAGCAACTTTACAATATT+GGG 0.269800 1_4:+76267902 None:intergenic
CTGATGCTTGTTGTGATATA+TGG 0.290243 1_4:-76263791 Msa0185640:three_prime_UTR
GAAGAAAGAGAGAAAAGATT+TGG 0.291801 1_4:+76270035 None:intergenic
AAGAAAGAGAGAAAAGATTT+GGG 0.292694 1_4:+76270036 None:intergenic
TTCTCTTGCCCTATTGCCTT+TGG 0.297403 1_4:-76263673 Msa0185640:three_prime_UTR
TCGTTCGTCCTAAGGAATAT+TGG 0.306347 1_4:-76269849 Msa0185640:CDS
GTCAAGGGAAAATAATTAAA+AGG 0.327336 1_4:+76270180 None:intergenic
TTCTTCATGCAATAGGTACT+TGG 0.333411 1_4:-76265048 Msa0185640:intron
ATGGTCAATCATTACATTAT+GGG 0.347598 1_4:+76266705 None:intergenic
AATCGGAAACCAAAGGCAAT+AGG 0.350752 1_4:+76263664 None:intergenic
CTAGCCTTGGATGCAGCGCC+GGG 0.352434 1_4:+76269892 None:intergenic
TTTATGGTGGAACTTGCATT+TGG 0.353006 1_4:-76263735 Msa0185640:three_prime_UTR
CGTTCGTCCTAAGGAATATT+GGG 0.365960 1_4:-76269848 Msa0185640:CDS
CAACTTGTCGCGCGATAGAT+TGG 0.369074 1_4:-76270115 Msa0185640:CDS
AGTCTTGGTTGTATGTTTGC+CGG 0.369394 1_4:-76265731 Msa0185640:CDS
ATACAAGACTTTAACTCAAA+TGG 0.385733 1_4:+76263559 None:intergenic
TAAGCTTCGCCTTATAGATT+GGG 0.388647 1_4:-76266674 Msa0185640:CDS
GAGGCCGCGGACGGCGGAAA+TGG 0.391900 1_4:+76269971 None:intergenic
GTCGACATGGCGCAGAAATT+CGG 0.393607 1_4:-76269931 Msa0185640:CDS
TGAAGATCAACAAGAAGCTC+TGG 0.398089 1_4:+76265782 None:intergenic
TGGTGAGGAAAGTGGGAAGG+GGG 0.401011 1_4:-76269646 Msa0185640:CDS
CCTAGCCTTGGATGCAGCGC+CGG 0.401329 1_4:+76269891 None:intergenic
ATGATTACTCTCTAGATTTG+TGG 0.402583 1_4:-76265754 Msa0185640:CDS
TCTCTAGATTTGTGGAGTCT+TGG 0.405112 1_4:-76265746 Msa0185640:CDS
TTCCACCAAAATAACAAAAT+CGG 0.406762 1_4:+76263647 None:intergenic
GTAAGCTTCGCCTTATAGAT+TGG 0.409217 1_4:-76266675 Msa0185640:CDS
CCGCCCCGGCGCTGCATCCA+AGG 0.409970 1_4:-76269896 Msa0185640:CDS
CATAAAAGAACGGCTCCTTC+CGG 0.410947 1_4:+76265517 None:intergenic
CCGGCGCTGCATCCAAGGCT+AGG 0.413393 1_4:-76269891 Msa0185640:CDS
TCGTAATCCCAATATTCCTT+AGG 0.421950 1_4:+76269841 None:intergenic
GTGTGTTGTTACAGATATTC+CGG 0.422815 1_4:-76265536 Msa0185640:intron
TATCGCGCGACAAGTTGAAT+TGG 0.429474 1_4:+76270121 None:intergenic
AATCTAAAACTAACATTCGT+TGG 0.430858 1_4:+76263507 None:intergenic
TACGGCCATAAATGGAAAAT+GGG 0.433696 1_4:+76270158 None:intergenic
GACTTGGGGTCTTCGACTGC+TGG 0.437978 1_4:+76267867 None:intergenic
GTGGTGAGGAAAGTGGGAAG+GGG 0.445623 1_4:-76269647 Msa0185640:CDS
ATCAACTGGTCAAGATAGCC+AGG 0.451077 1_4:-76265479 Msa0185640:CDS
TTATGGTGGAACTTGCATTT+GGG 0.451883 1_4:-76263734 Msa0185640:three_prime_UTR
ATCGGAAACCAAAGGCAATA+GGG 0.453867 1_4:+76263665 None:intergenic
AAAATATTACAGAATCTTTG+TGG 0.454458 1_4:-76267929 Msa0185640:CDS
GGACGAGGAGGAGGAGGCCG+CGG 0.455638 1_4:+76269958 None:intergenic
ATAATGTTCGTGTGGCTTCA+AGG 0.460306 1_4:-76266618 Msa0185640:intron
CTTGCAGAGTTCTATCATCC+TGG 0.462557 1_4:-76266649 Msa0185640:CDS
TTGTTGAGGAGGAGCGGCGG+AGG 0.464840 1_4:+76270013 None:intergenic
ATCTAAAACTAACATTCGTT+GGG 0.465336 1_4:+76263508 None:intergenic
CAGGGAGCAAGATGATTATG+AGG 0.465533 1_4:-76269669 Msa0185640:CDS
GGACGGCGGAAATGGTTGTT+CGG 0.468995 1_4:+76269979 None:intergenic
TCGACGGGTGGACGAGGAGG+AGG 0.470054 1_4:+76269949 None:intergenic
CATATTCAAATATGAGACTT+GGG 0.472470 1_4:+76267852 None:intergenic
TGTCAACGTCGTTCGTCCTA+AGG 0.474374 1_4:-76269857 Msa0185640:CDS
GAATTTCTGCGCCATGTCGA+CGG 0.478106 1_4:+76269933 None:intergenic
TTCGCAAGGGATTATGCATC+GGG 0.480545 1_4:-76266737 Msa0185640:CDS
AATTTCTGCGCCATGTCGAC+GGG 0.480934 1_4:+76269934 None:intergenic
TCACGATAACTATGATCAAC+TGG 0.483295 1_4:-76265493 Msa0185640:CDS
TAATTGGATTGAAGTATGGA+TGG 0.486342 1_4:+76263853 None:intergenic
TGGTTGTATGTTTGCCGGGA+TGG 0.488196 1_4:-76265726 Msa0185640:intron
GAGGAGGAGGCCGCGGACGG+CGG 0.488703 1_4:+76269965 None:intergenic
AAATGGTTGTTCGGCGGTGA+CGG 0.488819 1_4:+76269988 None:intergenic
AAATTTGCTGCTTACCATCC+CGG 0.491733 1_4:+76265712 None:intergenic
GTATTTGTAACAGGCATAGC+AGG 0.493852 1_4:-76264862 Msa0185640:intron
ACATATTCAAATATGAGACT+TGG 0.498562 1_4:+76267851 None:intergenic
ACGGGTGGACGAGGAGGAGG+AGG 0.498801 1_4:+76269952 None:intergenic
TGCAGCGCCGGGGCGGCGAG+TGG 0.500595 1_4:+76269903 None:intergenic
CGGCGCTGCATCCAAGGCTA+GGG 0.504072 1_4:-76269890 Msa0185640:CDS
GTCTTGGTTGTATGTTTGCC+GGG 0.506026 1_4:-76265730 Msa0185640:CDS
CCAATAAGTGCTGCAAAATG+TGG 0.509814 1_4:+76264976 None:intergenic
CCTTGGATGCAGCGCCGGGG+CGG 0.510068 1_4:+76269896 None:intergenic
GGTGGTGAGGAAAGTGGGAA+GGG 0.511063 1_4:-76269648 Msa0185640:CDS
ACGAAACCCTCACCGTTCAG+TGG 0.515437 1_4:-76269822 Msa0185640:CDS
TCCTCGTCCACCCGTCGACA+TGG 0.515882 1_4:-76269944 Msa0185640:CDS
GAGGAGGAGGAGGCCGCGGA+CGG 0.516584 1_4:+76269962 None:intergenic
GGAAAATCCACTCGCCGCCC+CGG 0.524127 1_4:-76269910 Msa0185640:CDS
ATCAGCATAAACCCTAGCCT+TGG 0.527589 1_4:+76269879 None:intergenic
CGAACATTATATTCCTTCCC+AGG 0.528772 1_4:+76266631 None:intergenic
GAATAAGTATCGCATTGAGT+TGG 0.531332 1_4:-76265001 Msa0185640:CDS
GCCATGTCGACGGGTGGACG+AGG 0.531348 1_4:+76269943 None:intergenic
CGGCGGTGACGGAGTTGTTG+AGG 0.542339 1_4:+76269999 None:intergenic
CTTCAATCCAATTAGAAATG+TGG 0.542866 1_4:-76263844 Msa0185640:CDS
TCTTCATGCAATAGGTACTT+GGG 0.546369 1_4:-76265047 Msa0185640:intron
TGGTCAATCATTACATTATG+GGG 0.546942 1_4:+76266706 None:intergenic
CGAAACCCTCACCGTTCAGT+GGG 0.549905 1_4:-76269821 Msa0185640:CDS
TATGAGGTGGTGAGGAAAGT+GGG 0.551839 1_4:-76269653 Msa0185640:CDS
AAGCTTCGCCTTATAGATTG+GGG 0.553750 1_4:-76266673 Msa0185640:CDS
TTTGCTTGTAGATATTTCAA+AGG 0.554007 1_4:-76265806 Msa0185640:intron
ACAACCATTTCCGCCGTCCG+CGG 0.556867 1_4:-76269975 Msa0185640:CDS
CAAACCTGTTAAGAAGAAGA+AGG 0.558576 1_4:-76269558 Msa0185640:intron
ATTCGCAAGGGATTATGCAT+CGG 0.562645 1_4:-76266738 Msa0185640:CDS
TTCTGCGCCATGTCGACGGG+TGG 0.563527 1_4:+76269937 None:intergenic
GGCGAAGCTTACGCTGCTCA+TGG 0.566986 1_4:+76266686 None:intergenic
TGGATTATTGCCATTCGCAA+GGG 0.572093 1_4:-76266750 Msa0185640:CDS
TTGGATTATTGCCATTCGCA+AGG 0.572743 1_4:-76266751 Msa0185640:CDS
AGGTGGTGAGGAAAGTGGGA+AGG 0.574076 1_4:-76269649 Msa0185640:CDS
TTGCAGAGTTCTATCATCCT+GGG 0.574095 1_4:-76266648 Msa0185640:CDS
AAGATGATTATGAGGTGGTG+AGG 0.574125 1_4:-76269661 Msa0185640:CDS
GAAGATCAACAAGAAGCTCT+GGG 0.576772 1_4:+76265783 None:intergenic
CATAAATGGAAAATGGGTCA+AGG 0.580087 1_4:+76270164 None:intergenic
AATTGGATTGAAGTATGGAT+GGG 0.580143 1_4:+76263854 None:intergenic
TATTACAGAATCTTTGTGGA+GGG 0.582117 1_4:-76267925 Msa0185640:CDS
GAATATTAATGCAGATCAAG+AGG 0.585346 1_4:-76267958 Msa0185640:intron
ACATTAATGAACCTTTGCCA+TGG 0.589071 1_4:+76264836 None:intergenic
TTATGAGGTGGTGAGGAAAG+TGG 0.590823 1_4:-76269654 Msa0185640:CDS
GCCCACTGCAAAAGAAGCCA+TGG 0.601915 1_4:-76264664 Msa0185640:intron
AGCTTCGCCTTATAGATTGG+GGG 0.605039 1_4:-76266672 Msa0185640:CDS
ACAGGCATAGCAGGAAGCCA+TGG 0.605939 1_4:-76264853 Msa0185640:intron
ATAAATGGAAAATGGGTCAA+GGG 0.610662 1_4:+76270165 None:intergenic
AATATTAATGCAGATCAAGA+GGG 0.616701 1_4:-76267957 Msa0185640:intron
GATGCATAATCCCTTGCGAA+TGG 0.619795 1_4:+76266740 None:intergenic
CAATAAGTGCTGCAAAATGT+GGG 0.623756 1_4:+76264977 None:intergenic
TACGATACGATCACCAAGAA+CGG 0.628422 1_4:-76264686 Msa0185640:CDS
ATAGCAGGAAGCCATGGCAA+AGG 0.632015 1_4:-76264847 Msa0185640:CDS
ACGGAGTTGTTGAGGAGGAG+CGG 0.635011 1_4:+76270007 None:intergenic
ATAACAAAATCGGAAACCAA+AGG 0.635578 1_4:+76263657 None:intergenic
ATATTCAAATATGAGACTTG+GGG 0.638686 1_4:+76267853 None:intergenic
ATATTACAGAATCTTTGTGG+AGG 0.642832 1_4:-76267926 Msa0185640:CDS
TTATCGTGACCATAAAAGAA+CGG 0.643726 1_4:+76265507 None:intergenic
GAGTTGTTGAGGAGGAGCGG+CGG 0.657530 1_4:+76270010 None:intergenic
CGGTGACGGAGTTGTTGAGG+AGG 0.657562 1_4:+76270002 None:intergenic
TCAACACTTGACTGTTCCTG+AGG 0.658381 1_4:-76264807 Msa0185640:intron
GTTGTTACAGATATTCCGGA+AGG 0.660267 1_4:-76265532 Msa0185640:intron
ATGTCGACGGGTGGACGAGG+AGG 0.661644 1_4:+76269946 None:intergenic
CGGCGGAAATGGTTGTTCGG+CGG 0.661894 1_4:+76269982 None:intergenic
AGAAAGAGAGAAAAGATTTG+GGG 0.663467 1_4:+76270037 None:intergenic
CATGCAATAGGTACTTGGGA+CGG 0.665861 1_4:-76265043 Msa0185640:intron
AGAGTTCTATCATCCTGGGA+AGG 0.669867 1_4:-76266644 Msa0185640:CDS
GAAGGAATATAATGTTCGTG+TGG 0.681364 1_4:-76266626 Msa0185640:CDS
GGAGCAAGATGATTATGAGG+TGG 0.686228 1_4:-76269666 Msa0185640:CDS
TAGCCTTGGATGCAGCGCCG+GGG 0.687087 1_4:+76269893 None:intergenic
AAACCCTCACCGTTCAGTGG+GGG 0.687592 1_4:-76269819 Msa0185640:intron
TCAACTGGTCAAGATAGCCA+GGG 0.708823 1_4:-76265478 Msa0185640:intron
GAAACCCTCACCGTTCAGTG+GGG 0.713472 1_4:-76269820 Msa0185640:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATATATAATATGACAAT+CGG + chr1_4:76265744-76265763 None:intergenic 10.0%
!! ATAAAAAATTCATAATTATC+CGG - chr1_4:76266550-76266569 Msa0185640:intron 10.0%
!!! AATAATTAATGTTTTTTGAG+AGG + chr1_4:76263497-76263516 None:intergenic 15.0%
!!! TAATAGCCTTAATTTTTTTT+AGG - chr1_4:76263524-76263543 Msa0185640:three_prime_UTR 15.0%
!!! AATAGCCTTAATTTTTTTTA+GGG - chr1_4:76263525-76263544 Msa0185640:three_prime_UTR 15.0%
!!! TAATTGATTTTGTATAGTTT+AGG - chr1_4:76263988-76264007 Msa0185640:intron 15.0%
!!! TGATTTTATTTTCTCTTTTT+AGG - chr1_4:76264204-76264223 Msa0185640:intron 15.0%
!!! GATTTTATTTTCTCTTTTTA+GGG - chr1_4:76264205-76264224 Msa0185640:intron 15.0%
!! AATCAAAGATCATAATAATT+GGG - chr1_4:76265087-76265106 Msa0185640:intron 15.0%
!!! TTTCTTTTTCTAAACTATAA+TGG - chr1_4:76265709-76265728 Msa0185640:intron 15.0%
!!! TATACTAGATGTTTTTTTAT+AGG - chr1_4:76266091-76266110 Msa0185640:intron 15.0%
!!! ATACTAGATGTTTTTTTATA+GGG - chr1_4:76266092-76266111 Msa0185640:intron 15.0%
!!! TTTTAAAATTTCAAGTTTGA+AGG - chr1_4:76267357-76267376 Msa0185640:intron 15.0%
!! TGTATAAATGAGATAAAAAA+AGG + chr1_4:76267910-76267929 None:intergenic 15.0%
!! AATAAAAACATTGCATTATA+AGG + chr1_4:76268054-76268073 None:intergenic 15.0%
!!! GTTTTTATTGTTTAGTATTT+AGG - chr1_4:76268065-76268084 Msa0185640:intron 15.0%
!!! AACTTTCATTATTTTTATGA+AGG - chr1_4:76269006-76269025 Msa0185640:intron 15.0%
!! AATGAAAATACTAAAAGATT+GGG + chr1_4:76269107-76269126 None:intergenic 15.0%
!!! TTTTAGTAAAGAAACTATTT+AGG - chr1_4:76269252-76269271 Msa0185640:intron 15.0%
!!! AAAAGTATTGAAATAGAAAA+TGG - chr1_4:76269487-76269506 Msa0185640:intron 15.0%
!!! AAAATCTGAACTTTTATTTA+TGG - chr1_4:76269988-76270007 Msa0185640:CDS 15.0%
!!! ATAGCCTTAATTTTTTTTAG+GGG - chr1_4:76263526-76263545 Msa0185640:three_prime_UTR 20.0%
!!! TTTTCCCCTAAAAAAAATTA+AGG + chr1_4:76263533-76263552 None:intergenic 20.0%
!! TTGGGGAATTTATTATTATA+AGG + chr1_4:76263688-76263707 None:intergenic 20.0%
!! TTTAGGAAAATGAAATTCTA+GGG - chr1_4:76264005-76264024 Msa0185640:intron 20.0%
!! TATGTGTAATTACTCATAAA+TGG - chr1_4:76264356-76264375 Msa0185640:intron 20.0%
!! AACATAAAAGATAGCATTAT+TGG + chr1_4:76264792-76264811 None:intergenic 20.0%
!! GAATCAAAGATCATAATAAT+TGG - chr1_4:76265086-76265105 Msa0185640:intron 20.0%
!! ATCAAAGATCATAATAATTG+GGG - chr1_4:76265088-76265107 Msa0185640:intron 20.0%
!!! ATTTAGTTTCTTTGTACTTT+TGG - chr1_4:76265576-76265595 Msa0185640:intron 20.0%
!! TTAATATTCAGAAGAATATG+AGG + chr1_4:76265770-76265789 None:intergenic 20.0%
!! AAAATATTACAGAATCTTTG+TGG - chr1_4:76265810-76265829 Msa0185640:intron 20.0%
!! AATTTCTCAGAAAACATAAA+TGG + chr1_4:76266449-76266468 None:intergenic 20.0%
!!! CTAATAAGTTGTTTTATAGT+TGG + chr1_4:76266621-76266640 None:intergenic 20.0%
!!! GTCTTTACTCTTTTTTTTAT+AGG - chr1_4:76267159-76267178 Msa0185640:intron 20.0%
!! TTGTCATTACATAATTACTT+AGG - chr1_4:76267277-76267296 Msa0185640:intron 20.0%
!!! TTTTTTTAAGGCAAAAATGT+TGG + chr1_4:76267541-76267560 None:intergenic 20.0%
!!! TTGGTAGTTTGTTTTTTTTA+AGG + chr1_4:76267553-76267572 None:intergenic 20.0%
!! TACGTGGTAAATATTAATAA+TGG - chr1_4:76267716-76267735 Msa0185640:intron 20.0%
!! CAATGAAAATACTAAAAGAT+TGG + chr1_4:76269108-76269127 None:intergenic 20.0%
!! ATAGTTTCTTTACTAAAAAG+AGG + chr1_4:76269250-76269269 None:intergenic 20.0%
!! AATCAGTAAAAAAACTGTTT+AGG - chr1_4:76269275-76269294 Msa0185640:intron 20.0%
!! AAAAAACAAGAAAAAATCCT+AGG + chr1_4:76269407-76269426 None:intergenic 20.0%
!!! AATGGTTTGTTTAACATATT+AGG - chr1_4:76269505-76269524 Msa0185640:intron 20.0%
!! TTGTTTAACATATTAGGATT+AGG - chr1_4:76269511-76269530 Msa0185640:intron 20.0%
!!! TGATTTTTTACTTCTAATAG+TGG + chr1_4:76269578-76269597 None:intergenic 20.0%
!! AAAATATTGATCAGATACAT+TGG - chr1_4:76269635-76269654 Msa0185640:CDS 20.0%
!! TATTCAATGAATCTAAAAAG+TGG - chr1_4:76269659-76269678 Msa0185640:CDS 20.0%
!! TAATAAAATATACACCCATA+TGG + chr1_4:76269705-76269724 None:intergenic 20.0%
!!! ATTGAATTTTACAACAGAAA+GGG + chr1_4:76270040-76270059 None:intergenic 20.0%
!!! AATTGAATTTTACAACAGAA+AGG + chr1_4:76270041-76270060 None:intergenic 20.0%
! GTCAAGGGAAAATAATTAAA+AGG + chr1_4:76263562-76263581 None:intergenic 25.0%
!! TTGGAATTGCAAATGTTTTA+CGG + chr1_4:76263602-76263621 None:intergenic 25.0%
! AAGAAAGAGAGAAAAGATTT+GGG + chr1_4:76263706-76263725 None:intergenic 25.0%
! GTTTAGGAAAATGAAATTCT+AGG - chr1_4:76264004-76264023 Msa0185640:intron 25.0%
!! TTTTGTGTTTGTGATTTTTC+AGG - chr1_4:76264051-76264070 Msa0185640:intron 25.0%
!! TTTGTGTTTGTGATTTTTCA+GGG - chr1_4:76264052-76264071 Msa0185640:intron 25.0%
! ATAGCTGATAAATGATGATA+GGG - chr1_4:76264283-76264302 Msa0185640:intron 25.0%
! AAATTGGACTAAGATTCATA+AGG + chr1_4:76264638-76264657 None:intergenic 25.0%
! AAGATAATGATCATGATGTT+AGG + chr1_4:76264694-76264713 None:intergenic 25.0%
! TTCATTCAAAGAAGAGAAAA+GGG + chr1_4:76264819-76264838 None:intergenic 25.0%
! ATTCATTCAAAGAAGAGAAA+AGG + chr1_4:76264820-76264839 None:intergenic 25.0%
! AACTAACTAATAAGATTCTG+AGG + chr1_4:76264877-76264896 None:intergenic 25.0%
! TTATGATCTTTGATTCTCTT+AGG + chr1_4:76265082-76265101 None:intergenic 25.0%
! TATAATATGACAATCGGAAA+GGG + chr1_4:76265738-76265757 None:intergenic 25.0%
! ATATAATATGACAATCGGAA+AGG + chr1_4:76265739-76265758 None:intergenic 25.0%
! AATATTAATGCAGATCAAGA+GGG - chr1_4:76265782-76265801 Msa0185640:CDS 25.0%
! TCAAGCAACTTTACAATATT+GGG + chr1_4:76265840-76265859 None:intergenic 25.0%
! ATATTCAAATATGAGACTTG+GGG + chr1_4:76265889-76265908 None:intergenic 25.0%
! CATATTCAAATATGAGACTT+GGG + chr1_4:76265890-76265909 None:intergenic 25.0%
! ACATATTCAAATATGAGACT+TGG + chr1_4:76265891-76265910 None:intergenic 25.0%
! TTATATCTATGAACTTCTGA+AGG - chr1_4:76265968-76265987 Msa0185640:intron 25.0%
! TTTAACAAATACTTCAGTCT+TGG - chr1_4:76266195-76266214 Msa0185640:intron 25.0%
!! TGTAAATGAACTGTACATTT+TGG - chr1_4:76266224-76266243 Msa0185640:intron 25.0%
!!! TACATTTTGGTTGGTATTTT+TGG - chr1_4:76266237-76266256 Msa0185640:intron 25.0%
!! TTTAATGAAGTTTTCTGATC+AGG - chr1_4:76266397-76266416 Msa0185640:intron 25.0%
! TGACAATACATACATTAACA+AGG + chr1_4:76266846-76266865 None:intergenic 25.0%
! ATGGTCAATCATTACATTAT+GGG + chr1_4:76267037-76267056 None:intergenic 25.0%
! AAGTTTGAAGGTTAAGTTTA+TGG - chr1_4:76267369-76267388 Msa0185640:intron 25.0%
! AGTTTGAAGGTTAAGTTTAT+GGG - chr1_4:76267370-76267389 Msa0185640:intron 25.0%
! ATATAAGGATTGAAGTGATA+AGG - chr1_4:76267400-76267419 Msa0185640:intron 25.0%
! TTATTATGTTACGTTAGTGA+GGG + chr1_4:76267443-76267462 None:intergenic 25.0%
! CTATTATGTTATGTTAGTGA+GGG + chr1_4:76267515-76267534 None:intergenic 25.0%
! TTTCTTGAAGAGAAAAATGT+TGG + chr1_4:76267572-76267591 None:intergenic 25.0%
!!! AAAATGATCATTTGTTATGC+TGG - chr1_4:76267633-76267652 Msa0185640:intron 25.0%
!!! AAATGATCATTTGTTATGCT+GGG - chr1_4:76267634-76267653 Msa0185640:intron 25.0%
! GTGGTAAATATTAATAATGG+TGG - chr1_4:76267719-76267738 Msa0185640:intron 25.0%
!! ATTTTCTCATTGTAATCTGA+TGG + chr1_4:76267767-76267786 None:intergenic 25.0%
! CAGATTACAATGAGAAAATA+TGG - chr1_4:76267768-76267787 Msa0185640:intron 25.0%
! AATATGGTTTAGTCCATAAT+AGG - chr1_4:76267784-76267803 Msa0185640:intron 25.0%
! TTTGCTTGTAGATATTTCAA+AGG - chr1_4:76267933-76267952 Msa0185640:CDS 25.0%
! TATTGTTTAGTATTTAGGCA+TGG - chr1_4:76268070-76268089 Msa0185640:intron 25.0%
! ATATCTGAATAATTCCACAT+TGG - chr1_4:76268384-76268403 Msa0185640:intron 25.0%
! TATCTGAATAATTCCACATT+GGG - chr1_4:76268385-76268404 Msa0185640:intron 25.0%
! ATAAAAATAAGTAAGCTGTG+TGG + chr1_4:76268524-76268543 None:intergenic 25.0%
!! TTTTTCTTTCTTCATGCAAT+AGG - chr1_4:76268684-76268703 Msa0185640:intron 25.0%
! CCTGTTACAAATACAATATT+GGG + chr1_4:76268871-76268890 None:intergenic 25.0%
! TTAGAATCAACCATCAATTT+CGG + chr1_4:76269346-76269365 None:intergenic 25.0%
!!! TTTTTTACTTCTAATAGTGG+CGG + chr1_4:76269575-76269594 None:intergenic 25.0%
!!! ATATTTTAGACCAGATACAT+CGG + chr1_4:76269622-76269641 None:intergenic 25.0%
! TGCTTATAATAGTTACCATA+TGG - chr1_4:76269687-76269706 Msa0185640:intron 25.0%
! GCTTATAATAGTTACCATAT+GGG - chr1_4:76269688-76269707 Msa0185640:intron 25.0%
!!! TGTATTTTGCTGATTGTATT+TGG - chr1_4:76269775-76269794 Msa0185640:intron 25.0%
!! TACTCATTTTACAGAATGTT+TGG - chr1_4:76269836-76269855 Msa0185640:CDS 25.0%
! ATAAATCTTAAATGCTATGC+AGG - chr1_4:76269862-76269881 Msa0185640:CDS 25.0%
! TTTCTAATTGGATTGAAGTA+TGG + chr1_4:76269893-76269912 None:intergenic 25.0%
!!! ATCTGAACTTTTATTTATGG+TGG - chr1_4:76269991-76270010 Msa0185640:CDS 25.0%
!! TTGAATTTTACAACAGAAAG+GGG + chr1_4:76270039-76270058 None:intergenic 25.0%
! TTCCACCAAAATAACAAAAT+CGG + chr1_4:76270095-76270114 None:intergenic 25.0%
! ATACAAGACTTTAACTCAAA+TGG + chr1_4:76270183-76270202 None:intergenic 25.0%
!!! TTCGTTGGGTATATTTTTTT+CGG + chr1_4:76270220-76270239 None:intergenic 25.0%
!! ATCTAAAACTAACATTCGTT+GGG + chr1_4:76270234-76270253 None:intergenic 25.0%
!! AATCTAAAACTAACATTCGT+TGG + chr1_4:76270235-76270254 None:intergenic 25.0%
ATAAATGGAAAATGGGTCAA+GGG + chr1_4:76263577-76263596 None:intergenic 30.0%
! AAATGTTTTACGGCCATAAA+TGG + chr1_4:76263592-76263611 None:intergenic 30.0%
AGAAAGAGAGAAAAGATTTG+GGG + chr1_4:76263705-76263724 None:intergenic 30.0%
GAAGAAAGAGAGAAAAGATT+TGG + chr1_4:76263707-76263726 None:intergenic 30.0%
! AAATACAGTGAGGTTTTTGA+AGG - chr1_4:76264116-76264135 Msa0185640:intron 30.0%
!!! CTCTTTTTAGGGTTTGATTT+AGG - chr1_4:76264216-76264235 Msa0185640:intron 30.0%
CATAGCTGATAAATGATGAT+AGG - chr1_4:76264282-76264301 Msa0185640:intron 30.0%
ATGAGTATGCTAGAAATTTC+AGG + chr1_4:76264450-76264469 None:intergenic 30.0%
! TCTTCTGTCTTTTCATACAT+TGG - chr1_4:76264472-76264491 Msa0185640:intron 30.0%
! CTTCTGTCTTTTCATACATT+GGG - chr1_4:76264473-76264492 Msa0185640:intron 30.0%
TATGTCATGCTACTCTAAAT+TGG + chr1_4:76264654-76264673 None:intergenic 30.0%
ATGATGTGTATAATCCGTAA+TGG + chr1_4:76264737-76264756 None:intergenic 30.0%
! TTCTTTTTGATGTCGTTCAA+TGG + chr1_4:76264937-76264956 None:intergenic 30.0%
! TTTCTTTTGCAAGAACATAG+AGG - chr1_4:76264991-76265010 Msa0185640:CDS 30.0%
!! ATCCTTCTCTGAAATTGAAT+GGG + chr1_4:76265150-76265169 None:intergenic 30.0%
!! TATCCTTCTCTGAAATTGAA+TGG + chr1_4:76265151-76265170 None:intergenic 30.0%
! TGGCAGATGTAAAATCTTTT+AGG - chr1_4:76265183-76265202 Msa0185640:intron 30.0%
CTCTTGAATTTCATATGCAA+AGG - chr1_4:76265243-76265262 Msa0185640:intron 30.0%
CATTTATCATCAAGTTACCA+TGG + chr1_4:76265333-76265352 None:intergenic 30.0%
! CATGGTAACTTGATGATAAA+TGG - chr1_4:76265331-76265350 Msa0185640:intron 30.0%
! ATATAACTGACTCCATCATA+TGG - chr1_4:76265367-76265386 Msa0185640:intron 30.0%
! TATAACTGACTCCATCATAT+GGG - chr1_4:76265368-76265387 Msa0185640:intron 30.0%
AAAATAGAAAATGTCGTGCT+GGG - chr1_4:76265492-76265511 Msa0185640:CDS 30.0%
TATTCTGTAGCATAACACTA+TGG + chr1_4:76265623-76265642 None:intergenic 30.0%
TATTCTCAAGAGTGAACAAA+TGG + chr1_4:76265656-76265675 None:intergenic 30.0%
TGAGAATATGTATGATACAG+TGG - chr1_4:76265668-76265687 Msa0185640:intron 30.0%
GAATATTAATGCAGATCAAG+AGG - chr1_4:76265781-76265800 Msa0185640:CDS 30.0%
ATATTACAGAATCTTTGTGG+AGG - chr1_4:76265813-76265832 Msa0185640:intron 30.0%
TATTACAGAATCTTTGTGGA+GGG - chr1_4:76265814-76265833 Msa0185640:intron 30.0%
GTCAAGCAACTTTACAATAT+TGG + chr1_4:76265841-76265860 None:intergenic 30.0%
! ATGTCGCTTGTTAAGAAAAA+AGG + chr1_4:76266009-76266028 None:intergenic 30.0%
!! AATGAACTGTACATTTTGGT+TGG - chr1_4:76266228-76266247 Msa0185640:intron 30.0%
TGGTTTAGATCAATCATAAC+CGG + chr1_4:76266572-76266591 None:intergenic 30.0%
!! AAGTTGTTTTATAGTTGGCA+TGG + chr1_4:76266616-76266635 None:intergenic 30.0%
CAGTAAACATTTGAATGAAC+AGG + chr1_4:76266689-76266708 None:intergenic 30.0%
!!! TGTTCCAAACTCTAAAGTTT+TGG - chr1_4:76266707-76266726 Msa0185640:CDS 30.0%
AATGTATGTATTGTCACTGT+TGG - chr1_4:76266850-76266869 Msa0185640:intron 30.0%
ATGTATGTATTGTCACTGTT+GGG - chr1_4:76266851-76266870 Msa0185640:intron 30.0%
TTTCAATAGCCACAAAAAAC+TGG + chr1_4:76266937-76266956 None:intergenic 30.0%
! AGTTATTTGAAACTTCTACC+AGG - chr1_4:76266963-76266982 Msa0185640:intron 30.0%
TGGTCAATCATTACATTATG+GGG + chr1_4:76267036-76267055 None:intergenic 30.0%
CATGGTCAATCATTACATTA+TGG + chr1_4:76267038-76267057 None:intergenic 30.0%
GTTTGAAGGTTAAGTTTATG+GGG - chr1_4:76267371-76267390 Msa0185640:intron 30.0%
TTTGAAGGTTAAGTTTATGG+GGG - chr1_4:76267372-76267391 Msa0185640:intron 30.0%
GCTATTATGTTATGTTAGTG+AGG + chr1_4:76267516-76267535 None:intergenic 30.0%
TGATGACAATCAACCTATTA+TGG + chr1_4:76267800-76267819 None:intergenic 30.0%
ATGATTACTCTCTAGATTTG+TGG - chr1_4:76267985-76268004 Msa0185640:intron 30.0%
CTAAGGTTTAACTCAACAAA+TGG + chr1_4:76268101-76268120 None:intergenic 30.0%
TTATCGTGACCATAAAAGAA+CGG + chr1_4:76268235-76268254 None:intergenic 30.0%
!! TTCAGTACTACTTTTACTCT+TGG - chr1_4:76268350-76268369 Msa0185640:intron 30.0%
!!! ATGTATCTTGTTTTTCTGCT+GGG - chr1_4:76268439-76268458 Msa0185640:intron 30.0%
TAGAAGAAAAGTTGGAAACA+GGG + chr1_4:76268487-76268506 None:intergenic 30.0%
AGGATAAGTAGAAGAAAAGT+TGG + chr1_4:76268495-76268514 None:intergenic 30.0%
! AACTTTTCTTCTACTTATCC+TGG - chr1_4:76268494-76268513 Msa0185640:intron 30.0%
! ACTTTTCTTCTACTTATCCT+GGG - chr1_4:76268495-76268514 Msa0185640:intron 30.0%
!!! CTTAGTTTTAGAAGCAACTT+AGG - chr1_4:76268620-76268639 Msa0185640:intron 30.0%
! GTTCTGTGCTTTCATAATTT+TGG - chr1_4:76268793-76268812 Msa0185640:intron 30.0%
CCCAATATTGTATTTGTAAC+AGG - chr1_4:76268868-76268887 Msa0185640:intron 30.0%
GCCTGTTACAAATACAATAT+TGG + chr1_4:76268872-76268891 None:intergenic 30.0%
! ATTTGTGTTTGGTCTTCATT+TGG - chr1_4:76269143-76269162 Msa0185640:intron 30.0%
! TTTGTGTTTGGTCTTCATTT+GGG - chr1_4:76269144-76269163 Msa0185640:intron 30.0%
AAAGAGGAAAAATCCAAACA+AGG + chr1_4:76269234-76269253 None:intergenic 30.0%
GTGCAATGATCTAATAAACA+GGG + chr1_4:76269304-76269323 None:intergenic 30.0%
AGTGCAATGATCTAATAAAC+AGG + chr1_4:76269305-76269324 None:intergenic 30.0%
TTCTCGAAGTAATTGTAGTT+AGG - chr1_4:76269380-76269399 Msa0185640:intron 30.0%
!!! CCTTAAAGCATTTTGAAACA+CGG + chr1_4:76269444-76269463 None:intergenic 30.0%
CGTGTTTCAAAATGCTTTAA+GGG - chr1_4:76269442-76269461 Msa0185640:intron 30.0%
! TTTTTACTTCTAATAGTGGC+GGG + chr1_4:76269574-76269593 None:intergenic 30.0%
AAACACTTGTATGGTAAGAA+GGG + chr1_4:76269814-76269833 None:intergenic 30.0%
AATTGGATTGAAGTATGGAT+GGG + chr1_4:76269888-76269907 None:intergenic 30.0%
TAATTGGATTGAAGTATGGA+TGG + chr1_4:76269889-76269908 None:intergenic 30.0%
CTTCAATCCAATTAGAAATG+TGG - chr1_4:76269895-76269914 Msa0185640:CDS 30.0%
CTACTTTCCACATTTCTAAT+TGG + chr1_4:76269905-76269924 None:intergenic 30.0%
ATAACAAAATCGGAAACCAA+AGG + chr1_4:76270085-76270104 None:intergenic 30.0%
!!! GGTTTCCGATTTTGTTATTT+TGG - chr1_4:76270087-76270106 Msa0185640:CDS 30.0%
!!! TTCCGATTTTGTTATTTTGG+TGG - chr1_4:76270090-76270109 Msa0185640:CDS 30.0%
!!! GTTATTTTGGTGGAAATTTC+AGG - chr1_4:76270100-76270119 Msa0185640:CDS 30.0%
CATAAATGGAAAATGGGTCA+AGG + chr1_4:76263578-76263597 None:intergenic 35.0%
! CTTGACCCATTTTCCATTTA+TGG - chr1_4:76263576-76263595 Msa0185640:three_prime_UTR 35.0%
TACGGCCATAAATGGAAAAT+GGG + chr1_4:76263584-76263603 None:intergenic 35.0%
TTACGGCCATAAATGGAAAA+TGG + chr1_4:76263585-76263604 None:intergenic 35.0%
TCGTAATCCCAATATTCCTT+AGG + chr1_4:76263901-76263920 None:intergenic 35.0%
TTATTATTACCCCCACTGAA+CGG + chr1_4:76263932-76263951 None:intergenic 35.0%
!! CTAGGGTATTGTTGTTGATT+TGG - chr1_4:76264022-76264041 Msa0185640:intron 35.0%
CAAACCTGTTAAGAAGAAGA+AGG - chr1_4:76264181-76264200 Msa0185640:intron 35.0%
ATCACCTTCTTCTTCTTAAC+AGG + chr1_4:76264188-76264207 None:intergenic 35.0%
TATGATAACCCCTTTCACTA+GGG + chr1_4:76264417-76264436 None:intergenic 35.0%
TTATGATAACCCCTTTCACT+AGG + chr1_4:76264418-76264437 None:intergenic 35.0%
TCATGATGTTAGGAACGAAT+TGG + chr1_4:76264684-76264703 None:intergenic 35.0%
! TTTTAACCAGCCATCCATTA+CGG - chr1_4:76264720-76264739 Msa0185640:intron 35.0%
! TGTGTATAATCCGTAATGGA+TGG + chr1_4:76264733-76264752 None:intergenic 35.0%
! TTTTTGATGTCGTTCAATGG+TGG + chr1_4:76264934-76264953 None:intergenic 35.0%
AGAATCATAGAGAACAGAGA+AGG - chr1_4:76265029-76265048 Msa0185640:CDS 35.0%
CATAATAATTGGGGAAAGAG+AGG - chr1_4:76265097-76265116 Msa0185640:intron 35.0%
TAAGGAACACAGATAGAGAA+TGG - chr1_4:76265122-76265141 Msa0185640:intron 35.0%
! GAAGGATAATTTGCCAAAAG+TGG - chr1_4:76265163-76265182 Msa0185640:intron 35.0%
!!! GATTTTACATCTGCCACTTT+TGG + chr1_4:76265179-76265198 None:intergenic 35.0%
!! AGCTCTTTTGAGTGTTATAC+TGG - chr1_4:76265213-76265232 Msa0185640:intron 35.0%
!! AGGTCTTTTGAGTGTTATAC+TGG - chr1_4:76265263-76265282 Msa0185640:intron 35.0%
TTATCATCAAGTTACCATGG+TGG + chr1_4:76265330-76265349 None:intergenic 35.0%
! AACAGTCTTATCCCATATGA+TGG + chr1_4:76265382-76265401 None:intergenic 35.0%
AGAATGAAGATGCATAAGCA+TGG + chr1_4:76265430-76265449 None:intergenic 35.0%
GAAAATAGAAAATGTCGTGC+TGG - chr1_4:76265491-76265510 Msa0185640:CDS 35.0%
ATATCATAGTCTGACAGTGT+AGG + chr1_4:76265942-76265961 None:intergenic 35.0%
ACAAGCAATTTCAAGCGAAA+AGG + chr1_4:76266374-76266393 None:intergenic 35.0%
! ATGAAGTTTTCTGATCAGGA+TGG - chr1_4:76266401-76266420 Msa0185640:intron 35.0%
!! AGTTTCATTGACTTGTTGTC+TGG - chr1_4:76266527-76266546 Msa0185640:intron 35.0%
GAGTCATATACATAATGAGC+TGG + chr1_4:76266592-76266611 None:intergenic 35.0%
!! CTAGCCAAAACTTTAGAGTT+TGG + chr1_4:76266714-76266733 None:intergenic 35.0%
ATGCTAAGAATGAAACCTAC+AGG + chr1_4:76266800-76266819 None:intergenic 35.0%
TAGCCACAAAAAACTGGAAA+TGG + chr1_4:76266931-76266950 None:intergenic 35.0%
TAAGCTTCGCCTTATAGATT+GGG - chr1_4:76267065-76267084 Msa0185640:intron 35.0%
GAAGGAATATAATGTTCGTG+TGG - chr1_4:76267113-76267132 Msa0185640:intron 35.0%
CAACCTTTCTATCTGCAATT+AGG - chr1_4:76267300-76267319 Msa0185640:intron 35.0%
AAGCCTAATTGCAGATAGAA+AGG + chr1_4:76267306-76267325 None:intergenic 35.0%
TTTCTATCTGCAATTAGGCT+TGG - chr1_4:76267305-76267324 Msa0185640:intron 35.0%
! GGCTTGGTTATACATATACT+TGG - chr1_4:76267321-76267340 Msa0185640:intron 35.0%
TTGAAGGTTAAGTTTATGGG+GGG - chr1_4:76267373-76267392 Msa0185640:intron 35.0%
TGAAGTGATAAGGAAGTCAT+TGG - chr1_4:76267410-76267429 Msa0185640:intron 35.0%
! TGGGAAGATTTTTGTACAGA+GGG - chr1_4:76267653-76267672 Msa0185640:intron 35.0%
TCCAAAATCAATACTGTACG+TGG - chr1_4:76267700-76267719 Msa0185640:intron 35.0%
!!! ACCACGTACAGTATTGATTT+TGG + chr1_4:76267704-76267723 None:intergenic 35.0%
TGATGGCATAAGGATGTTTA+TGG + chr1_4:76267750-76267769 None:intergenic 35.0%
CATTGTAATCTGATGGCATA+AGG + chr1_4:76267760-76267779 None:intergenic 35.0%
GGAGACTTCAAATTTCACAT+TGG + chr1_4:76268167-76268186 None:intergenic 35.0%
ATATCTGTAACAACACACAC+AGG + chr1_4:76268201-76268220 None:intergenic 35.0%
! GTGTGTTGTTACAGATATTC+CGG - chr1_4:76268203-76268222 Msa0185640:intron 35.0%
TCACGATAACTATGATCAAC+TGG - chr1_4:76268246-76268265 Msa0185640:intron 35.0%
ACATAATCAAGTTCCCAATG+TGG + chr1_4:76268401-76268420 None:intergenic 35.0%
!!! CATGTATCTTGTTTTTCTGC+TGG - chr1_4:76268438-76268457 Msa0185640:intron 35.0%
GTAGAAGAAAAGTTGGAAAC+AGG + chr1_4:76268488-76268507 None:intergenic 35.0%
TTCTTCATGCAATAGGTACT+TGG - chr1_4:76268691-76268710 Msa0185640:intron 35.0%
TCTTCATGCAATAGGTACTT+GGG - chr1_4:76268692-76268711 Msa0185640:intron 35.0%
! GAATAAGTATCGCATTGAGT+TGG - chr1_4:76268738-76268757 Msa0185640:intron 35.0%
! CAATAAGTGCTGCAAAATGT+GGG + chr1_4:76268765-76268784 None:intergenic 35.0%
! CACATTTTGCAGCACTTATT+GGG - chr1_4:76268764-76268783 Msa0185640:intron 35.0%
ACATTAATGAACCTTTGCCA+TGG + chr1_4:76268906-76268925 None:intergenic 35.0%
ACTATAATGCATACTACCTC+AGG + chr1_4:76268951-76268970 None:intergenic 35.0%
! AGTATTTTCATTGCTGCACT+TGG - chr1_4:76269115-76269134 Msa0185640:intron 35.0%
! GTATTTTCATTGCTGCACTT+GGG - chr1_4:76269116-76269135 Msa0185640:intron 35.0%
! TTGTGTTTGGTCTTCATTTG+GGG - chr1_4:76269145-76269164 Msa0185640:intron 35.0%
ATGTATCTGACCGAAATTGA+TGG - chr1_4:76269333-76269352 Msa0185640:intron 35.0%
AGTAATTGTAGTTAGGACCT+AGG - chr1_4:76269387-76269406 Msa0185640:intron 35.0%
CCGTGTTTCAAAATGCTTTA+AGG - chr1_4:76269441-76269460 Msa0185640:intron 35.0%
CATTGAATAACCGATGTATC+TGG - chr1_4:76269609-76269628 Msa0185640:CDS 35.0%
CAAACACTTGTATGGTAAGA+AGG + chr1_4:76269815-76269834 None:intergenic 35.0%
CTTCTTACCATACAAGTGTT+TGG - chr1_4:76269813-76269832 Msa0185640:intron 35.0%
ATGAGTACCAAACACTTGTA+TGG + chr1_4:76269823-76269842 None:intergenic 35.0%
!! CTGATGCTTGTTGTGATATA+TGG - chr1_4:76269948-76269967 Msa0185640:CDS 35.0%
! TTTATGGTGGAACTTGCATT+TGG - chr1_4:76270004-76270023 Msa0185640:CDS 35.0%
! TTATGGTGGAACTTGCATTT+GGG - chr1_4:76270005-76270024 Msa0185640:CDS 35.0%
TCGTTCGTCCTAAGGAATAT+TGG - chr1_4:76263890-76263909 Msa0185640:intron 40.0%
CGTTCGTCCTAAGGAATATT+GGG - chr1_4:76263891-76263910 Msa0185640:intron 40.0%
AAGATGATTATGAGGTGGTG+AGG - chr1_4:76264078-76264097 Msa0185640:intron 40.0%
CTCATAAATGGATGTGCACA+AGG - chr1_4:76264368-76264387 Msa0185640:intron 40.0%
TCAGTTACATCCCTAGTGAA+AGG - chr1_4:76264404-76264423 Msa0185640:intron 40.0%
CAGTTACATCCCTAGTGAAA+GGG - chr1_4:76264405-76264424 Msa0185640:intron 40.0%
AGTTACATCCCTAGTGAAAG+GGG - chr1_4:76264406-76264425 Msa0185640:intron 40.0%
! TTTCATACATTGGGTGCTGT+TGG - chr1_4:76264482-76264501 Msa0185640:intron 40.0%
!! ATTCTCCTCGGTGCTAATTT+GGG - chr1_4:76264554-76264573 Msa0185640:intron 40.0%
!! TATAATCCGTAATGGATGGC+TGG + chr1_4:76264729-76264748 None:intergenic 40.0%
TTGAGAGAACCTAGAAGACT+AGG - chr1_4:76264958-76264977 Msa0185640:intron 40.0%
CATAGAGAACAGAGAAGGAA+AGG - chr1_4:76265034-76265053 Msa0185640:CDS 40.0%
ATTGGGGAAAGAGAGGATTA+AGG - chr1_4:76265104-76265123 Msa0185640:intron 40.0%
AGCCCATTCAATTTCAGAGA+AGG - chr1_4:76265145-76265164 Msa0185640:intron 40.0%
ATGGGATAAGACTGTTAGTG+AGG - chr1_4:76265386-76265405 Msa0185640:intron 40.0%
! CACAGATTGAAGTGTTACAG+TGG + chr1_4:76265456-76265475 None:intergenic 40.0%
CACTGTAACACTTCAATCTG+TGG - chr1_4:76265454-76265473 Msa0185640:intron 40.0%
ATGTATGATACAGTGGCAGA+AGG - chr1_4:76265675-76265694 Msa0185640:intron 40.0%
TGTATGATACAGTGGCAGAA+GGG - chr1_4:76265676-76265695 Msa0185640:intron 40.0%
TCTTGAGCACAACAAGATCA+AGG + chr1_4:76266071-76266090 None:intergenic 40.0%
!!! TTGGTTGGTATTTTTGGACC+TGG - chr1_4:76266243-76266262 Msa0185640:intron 40.0%
!! ATTTTTGGACCTGGTATCTC+AGG - chr1_4:76266252-76266271 Msa0185640:intron 40.0%
GTTATAGAACTCTGCTGCAT+AGG - chr1_4:76266283-76266302 Msa0185640:intron 40.0%
CAAGACAATGTGATATGCCT+TGG + chr1_4:76266321-76266340 None:intergenic 40.0%
AAAACTGGAAATGGCAGGAT+TGG + chr1_4:76266922-76266941 None:intergenic 40.0%
CACAAAAAACTGGAAATGGC+AGG + chr1_4:76266927-76266946 None:intergenic 40.0%
!!! CTGCCATTTCCAGTTTTTTG+TGG - chr1_4:76266925-76266944 Msa0185640:intron 40.0%
TTGAAACTTCTACCAGGCAT+TGG - chr1_4:76266969-76266988 Msa0185640:intron 40.0%
AATGGCAATAATCCAATGCC+TGG + chr1_4:76266984-76267003 None:intergenic 40.0%
TTGGATTATTGCCATTCGCA+AGG - chr1_4:76266988-76267007 Msa0185640:intron 40.0%
TGGATTATTGCCATTCGCAA+GGG - chr1_4:76266989-76267008 Msa0185640:intron 40.0%
ATTCGCAAGGGATTATGCAT+CGG - chr1_4:76267001-76267020 Msa0185640:intron 40.0%
GTAAGCTTCGCCTTATAGAT+TGG - chr1_4:76267064-76267083 Msa0185640:intron 40.0%
AAGCTTCGCCTTATAGATTG+GGG - chr1_4:76267066-76267085 Msa0185640:intron 40.0%
TTGCAGAGTTCTATCATCCT+GGG - chr1_4:76267091-76267110 Msa0185640:intron 40.0%
CGAACATTATATTCCTTCCC+AGG + chr1_4:76267111-76267130 None:intergenic 40.0%
ATAATGTTCGTGTGGCTTCA+AGG - chr1_4:76267121-76267140 Msa0185640:intron 40.0%
AGTTAGGACATTGGGTGATA+CGG - chr1_4:76267201-76267220 Msa0185640:intron 40.0%
TTTATGGGGGGAAGGATATA+AGG - chr1_4:76267385-76267404 Msa0185640:intron 40.0%
! CTGGGAAGATTTTTGTACAG+AGG - chr1_4:76267652-76267671 Msa0185640:intron 40.0%
! GGGAAGATTTTTGTACAGAG+GGG - chr1_4:76267654-76267673 Msa0185640:intron 40.0%
! GGAAGATTTTTGTACAGAGG+GGG - chr1_4:76267655-76267674 Msa0185640:intron 40.0%
TGGCATAAGGATGTTTATGG+AGG + chr1_4:76267747-76267766 None:intergenic 40.0%
GAAGATCAACAAGAAGCTCT+GGG + chr1_4:76267959-76267978 None:intergenic 40.0%
TGAAGATCAACAAGAAGCTC+TGG + chr1_4:76267960-76267979 None:intergenic 40.0%
TCTCTAGATTTGTGGAGTCT+TGG - chr1_4:76267993-76268012 Msa0185640:intron 40.0%
AGTCTTGGTTGTATGTTTGC+CGG - chr1_4:76268008-76268027 Msa0185640:intron 40.0%
!! AAATTTGCTGCTTACCATCC+CGG + chr1_4:76268030-76268049 None:intergenic 40.0%
TGCTGTAGTTGAGGATTCTA+AGG + chr1_4:76268118-76268137 None:intergenic 40.0%
GATATGTCATGCTGTAGTTG+AGG + chr1_4:76268127-76268146 None:intergenic 40.0%
GTTGTTACAGATATTCCGGA+AGG - chr1_4:76268207-76268226 Msa0185640:intron 40.0%
ACACACATAACCCAACAATC+TGG + chr1_4:76268319-76268338 None:intergenic 40.0%
ATTGTTGGGTTATGTGTGTG+TGG - chr1_4:76268320-76268339 Msa0185640:intron 40.0%
TTGTTGGGTTATGTGTGTGT+GGG - chr1_4:76268321-76268340 Msa0185640:intron 40.0%
AAAAGTTGGAAACAGGGCAA+AGG + chr1_4:76268481-76268500 None:intergenic 40.0%
! CCAATAAGTGCTGCAAAATG+TGG + chr1_4:76268766-76268785 None:intergenic 40.0%
! CCACATTTTGCAGCACTTAT+TGG - chr1_4:76268763-76268782 Msa0185640:intron 40.0%
! ATTTTGCAGCACTTATTGGG+AGG - chr1_4:76268767-76268786 Msa0185640:intron 40.0%
GTATTTGTAACAGGCATAGC+AGG - chr1_4:76268877-76268896 Msa0185640:intron 40.0%
TACGATACGATCACCAAGAA+CGG - chr1_4:76269053-76269072 Msa0185640:intron 40.0%
AAAAGATTGGGCTGTTACCA+TGG + chr1_4:76269095-76269114 None:intergenic 40.0%
!! ACTTGGGCTTGATTTGTGTT+TGG - chr1_4:76269132-76269151 Msa0185640:intron 40.0%
! TCTGTTAATCCTGCCTTGTT+TGG - chr1_4:76269218-76269237 Msa0185640:intron 40.0%
AGGAAAAATCCAAACAAGGC+AGG + chr1_4:76269230-76269249 None:intergenic 40.0%
! TTGTATGGTAAGAAGGGCAT+TGG + chr1_4:76269808-76269827 None:intergenic 40.0%
ATCGGAAACCAAAGGCAATA+GGG + chr1_4:76270077-76270096 None:intergenic 40.0%
AATCGGAAACCAAAGGCAAT+AGG + chr1_4:76270078-76270097 None:intergenic 40.0%
! TATCGCGCGACAAGTTGAAT+TGG + chr1_4:76263621-76263640 None:intergenic 45.0%
ATCAGCATAAACCCTAGCCT+TGG + chr1_4:76263863-76263882 None:intergenic 45.0%
CAGGGAGCAAGATGATTATG+AGG - chr1_4:76264070-76264089 Msa0185640:intron 45.0%
GGAGCAAGATGATTATGAGG+TGG - chr1_4:76264073-76264092 Msa0185640:intron 45.0%
TTATGAGGTGGTGAGGAAAG+TGG - chr1_4:76264085-76264104 Msa0185640:intron 45.0%
TATGAGGTGGTGAGGAAAGT+GGG - chr1_4:76264086-76264105 Msa0185640:intron 45.0%
! AACCGACACTTTTGTGTCAC+CGG - chr1_4:76264242-76264261 Msa0185640:intron 45.0%
GAATCAAACCTGAGACCTTG+AGG + chr1_4:76264538-76264557 None:intergenic 45.0%
GTCTCAGGTTTGATTCTCCT+CGG - chr1_4:76264542-76264561 Msa0185640:intron 45.0%
!! GATTCTCCTCGGTGCTAATT+TGG - chr1_4:76264553-76264572 Msa0185640:intron 45.0%
! AGTACAGCTCCTAGTCTTCT+AGG + chr1_4:76264970-76264989 None:intergenic 45.0%
CATGGTGGCATGGTGAAATT+AGG + chr1_4:76265315-76265334 None:intergenic 45.0%
CTAATTTCACCATGCCACCA+TGG - chr1_4:76265313-76265332 Msa0185640:intron 45.0%
ATCAAGTTACCATGGTGGCA+TGG + chr1_4:76265325-76265344 None:intergenic 45.0%
TAACACTATGGCCCATTGCA+CGG + chr1_4:76265611-76265630 None:intergenic 45.0%
GATGCATAATCCCTTGCGAA+TGG + chr1_4:76267002-76267021 None:intergenic 45.0%
TTCGCAAGGGATTATGCATC+GGG - chr1_4:76267002-76267021 Msa0185640:intron 45.0%
AGCTTCGCCTTATAGATTGG+GGG - chr1_4:76267067-76267086 Msa0185640:intron 45.0%
CTTGCAGAGTTCTATCATCC+TGG - chr1_4:76267090-76267109 Msa0185640:intron 45.0%
AGAGTTCTATCATCCTGGGA+AGG - chr1_4:76267095-76267114 Msa0185640:intron 45.0%
TTTATAGGCGCTCACAATGC+AGG - chr1_4:76267174-76267193 Msa0185640:intron 45.0%
TCACAATGCAGGTAGGAGTT+AGG - chr1_4:76267185-76267204 Msa0185640:intron 45.0%
CAGGTAGGAGTTAGGACATT+GGG - chr1_4:76267193-76267212 Msa0185640:intron 45.0%
GTTAGGACATTGGGTGATAC+GGG - chr1_4:76267202-76267221 Msa0185640:intron 45.0%
AGGTTAAGTTTATGGGGGGA+AGG - chr1_4:76267377-76267396 Msa0185640:intron 45.0%
AGTGAGGGAGTTGAACATCT+TGG + chr1_4:76267500-76267519 None:intergenic 45.0%
GTCTTGGTTGTATGTTTGCC+GGG - chr1_4:76268009-76268028 Msa0185640:intron 45.0%
CACACACAGGTAAGTGAAGT+AGG + chr1_4:76268188-76268207 None:intergenic 45.0%
CATAAAAGAACGGCTCCTTC+CGG + chr1_4:76268225-76268244 None:intergenic 45.0%
ATCAACTGGTCAAGATAGCC+AGG - chr1_4:76268260-76268279 Msa0185640:intron 45.0%
TCAACTGGTCAAGATAGCCA+GGG - chr1_4:76268261-76268280 Msa0185640:intron 45.0%
TTCACATGCTACACTTACCC+TGG + chr1_4:76268281-76268300 None:intergenic 45.0%
GGTAAGTGTAGCATGTGAAG+TGG - chr1_4:76268282-76268301 Msa0185640:intron 45.0%
!! GATTGCTGCTTTCACAGTCA+CGG + chr1_4:76268565-76268584 None:intergenic 45.0%
CATGCAATAGGTACTTGGGA+CGG - chr1_4:76268696-76268715 Msa0185640:intron 45.0%
TCAACACTTGACTGTTCCTG+AGG - chr1_4:76268932-76268951 Msa0185640:intron 45.0%
! ACCATGGCTTCTTTTGCAGT+GGG + chr1_4:76269079-76269098 None:intergenic 45.0%
! TACCATGGCTTCTTTTGCAG+TGG + chr1_4:76269080-76269099 None:intergenic 45.0%
! TACTTCTAATAGTGGCGGGA+GGG + chr1_4:76269570-76269589 None:intergenic 45.0%
! TTACTTCTAATAGTGGCGGG+AGG + chr1_4:76269571-76269590 None:intergenic 45.0%
TTCTCTTGCCCTATTGCCTT+TGG - chr1_4:76270066-76270085 Msa0185640:CDS 45.0%
!!! ATTTTTTTTTAAAAATCTAA+AGG + chr1_4:76269741-76269760 None:intergenic 5.0%
CAACTTGTCGCGCGATAGAT+TGG - chr1_4:76263624-76263643 Msa0185640:three_prime_UTR 50.0%
AAATGGTTGTTCGGCGGTGA+CGG + chr1_4:76263754-76263773 None:intergenic 50.0%
AATTTCTGCGCCATGTCGAC+GGG + chr1_4:76263808-76263827 None:intergenic 50.0%
GAATTTCTGCGCCATGTCGA+CGG + chr1_4:76263809-76263828 None:intergenic 50.0%
GTCGACATGGCGCAGAAATT+CGG - chr1_4:76263808-76263827 Msa0185640:exon 50.0%
TGTCAACGTCGTTCGTCCTA+AGG - chr1_4:76263882-76263901 Msa0185640:intron 50.0%
!! TGAAGCATCGAAACAGACGC+CGG + chr1_4:76264264-76264283 None:intergenic 50.0%
!! GGTGCTGTTGGTGTTGACTT+GGG - chr1_4:76264494-76264513 Msa0185640:intron 50.0%
!! TTGGTGTTGACTTGGGACCT+TGG - chr1_4:76264501-76264520 Msa0185640:intron 50.0%
TTGAGGAGGATCACACTCCA+AGG + chr1_4:76264521-76264540 None:intergenic 50.0%
TTGGAGTGTGATCCTCCTCA+AGG - chr1_4:76264520-76264539 Msa0185640:intron 50.0%
TCAAACCTGAGACCTTGAGG+AGG + chr1_4:76264535-76264554 None:intergenic 50.0%
!! TCCTCGGTGCTAATTTGGGT+GGG - chr1_4:76264558-76264577 Msa0185640:intron 50.0%
! GGAAAGGTGCAAATAGCTGC+AGG - chr1_4:76265050-76265069 Msa0185640:intron 50.0%
TGGATGTCAACACCGTGCAA+TGG - chr1_4:76265596-76265615 Msa0185640:intron 50.0%
GGATGTCAACACCGTGCAAT+GGG - chr1_4:76265597-76265616 Msa0185640:intron 50.0%
TTGGACCTGGTATCTCAGGA+AGG - chr1_4:76266256-76266275 Msa0185640:intron 50.0%
TGGACCTGGTATCTCAGGAA+GGG - chr1_4:76266257-76266276 Msa0185640:intron 50.0%
ATAGGTGCTCTTGCGATCCA+AGG - chr1_4:76266301-76266320 Msa0185640:intron 50.0%
CTGCAAGCCCCCAATCTATA+AGG + chr1_4:76267077-76267096 None:intergenic 50.0%
GCAGGTAGGAGTTAGGACAT+TGG - chr1_4:76267192-76267211 Msa0185640:intron 50.0%
TGGTTGTATGTTTGCCGGGA+TGG - chr1_4:76268013-76268032 Msa0185640:intron 50.0%
! CGGAAGGAGCCGTTCTTTTA+TGG - chr1_4:76268223-76268242 Msa0185640:intron 50.0%
TTGCAACTGCGCCAGATTGT+TGG - chr1_4:76268305-76268324 Msa0185640:intron 50.0%
TGCAACTGCGCCAGATTGTT+GGG - chr1_4:76268306-76268325 Msa0185640:intron 50.0%
ATAGCAGGAAGCCATGGCAA+AGG - chr1_4:76268892-76268911 Msa0185640:intron 50.0%
! TGGTCTTCATTTGGGGCCTT+CGG - chr1_4:76269152-76269171 Msa0185640:intron 50.0%
ATGCCAGATAAGAAGCCCGA+AGG + chr1_4:76269171-76269190 None:intergenic 50.0%
CGGGCTTCTTATCTGGCATT+TGG - chr1_4:76269172-76269191 Msa0185640:intron 50.0%
ACGGAGTTGTTGAGGAGGAG+CGG + chr1_4:76263735-76263754 None:intergenic 55.0%
GGACGGCGGAAATGGTTGTT+CGG + chr1_4:76263763-76263782 None:intergenic 55.0%
ACGAAACCCTCACCGTTCAG+TGG - chr1_4:76263917-76263936 Msa0185640:intron 55.0%
CGAAACCCTCACCGTTCAGT+GGG - chr1_4:76263918-76263937 Msa0185640:intron 55.0%
GAAACCCTCACCGTTCAGTG+GGG - chr1_4:76263919-76263938 Msa0185640:intron 55.0%
AAACCCTCACCGTTCAGTGG+GGG - chr1_4:76263920-76263939 Msa0185640:intron 55.0%
TTACCCCCACTGAACGGTGA+GGG + chr1_4:76263926-76263945 None:intergenic 55.0%
ATTACCCCCACTGAACGGTG+AGG + chr1_4:76263927-76263946 None:intergenic 55.0%
AGGTGGTGAGGAAAGTGGGA+AGG - chr1_4:76264090-76264109 Msa0185640:intron 55.0%
GGTGGTGAGGAAAGTGGGAA+GGG - chr1_4:76264091-76264110 Msa0185640:intron 55.0%
GTGGTGAGGAAAGTGGGAAG+GGG - chr1_4:76264092-76264111 Msa0185640:intron 55.0%
TGGTGAGGAAAGTGGGAAGG+GGG - chr1_4:76264093-76264112 Msa0185640:intron 55.0%
GGGAAGGGGGAAATACAGTG+AGG - chr1_4:76264106-76264125 Msa0185640:intron 55.0%
! CGCCGGTGACACAAAAGTGT+CGG + chr1_4:76264247-76264266 None:intergenic 55.0%
!! GGGTGCTGTTGGTGTTGACT+TGG - chr1_4:76264493-76264512 Msa0185640:intron 55.0%
GTGATCCTCCTCAAGGTCTC+AGG - chr1_4:76264527-76264546 Msa0185640:intron 55.0%
!! CTCCTCGGTGCTAATTTGGG+TGG - chr1_4:76264557-76264576 Msa0185640:intron 55.0%
CAAGCCCTTCCTGAGATACC+AGG + chr1_4:76266264-76266283 None:intergenic 55.0%
CGTCTCTTCATGCGTCCTGT+AGG - chr1_4:76266782-76266801 Msa0185640:intron 55.0%
TAGGCGCTCACAATGCAGGT+AGG - chr1_4:76267178-76267197 Msa0185640:intron 55.0%
CATTGGGTGATACGGGTGCT+TGG - chr1_4:76267209-76267228 Msa0185640:intron 55.0%
AGTAAGCTGTGTGGTCTCCC+AGG + chr1_4:76268515-76268534 None:intergenic 55.0%
ACAGGCATAGCAGGAAGCCA+TGG - chr1_4:76268886-76268905 Msa0185640:intron 55.0%
! CTTTTGCAGTGGGCCGTTCT+TGG + chr1_4:76269069-76269088 None:intergenic 55.0%
GCCCACTGCAAAAGAAGCCA+TGG - chr1_4:76269075-76269094 Msa0185640:intron 55.0%
! GGTCTTCATTTGGGGCCTTC+GGG - chr1_4:76269153-76269172 Msa0185640:intron 55.0%
GAGTTGTTGAGGAGGAGCGG+CGG + chr1_4:76263732-76263751 None:intergenic 60.0%
!! CGGTGACGGAGTTGTTGAGG+AGG + chr1_4:76263740-76263759 None:intergenic 60.0%
CGGCGGAAATGGTTGTTCGG+CGG + chr1_4:76263760-76263779 None:intergenic 60.0%
ACAACCATTTCCGCCGTCCG+CGG - chr1_4:76263764-76263783 Msa0185640:three_prime_UTR 60.0%
GCCCACCCAAATTAGCACCG+AGG + chr1_4:76264562-76264581 None:intergenic 60.0%
GACTTGGGGTCTTCGACTGC+TGG + chr1_4:76265875-76265894 None:intergenic 60.0%
GGCGAAGCTTACGCTGCTCA+TGG + chr1_4:76267056-76267075 None:intergenic 60.0%
GGTGATACGGGTGCTTGGCA+AGG - chr1_4:76267214-76267233 Msa0185640:intron 60.0%
GATACGGGTGCTTGGCAAGG+TGG - chr1_4:76267217-76267236 Msa0185640:intron 60.0%
GGGCCTTCGGGCTTCTTATC+TGG - chr1_4:76269165-76269184 Msa0185640:intron 60.0%
TTGTTGAGGAGGAGCGGCGG+AGG + chr1_4:76263729-76263748 None:intergenic 65.0%
!! CGGCGGTGACGGAGTTGTTG+AGG + chr1_4:76263743-76263762 None:intergenic 65.0%
ATGTCGACGGGTGGACGAGG+AGG + chr1_4:76263796-76263815 None:intergenic 65.0%
TCCTCGTCCACCCGTCGACA+TGG - chr1_4:76263795-76263814 Msa0185640:three_prime_UTR 65.0%
TTCTGCGCCATGTCGACGGG+TGG + chr1_4:76263805-76263824 None:intergenic 65.0%
GGAAAATCCACTCGCCGCCC+CGG - chr1_4:76263829-76263848 Msa0185640:CDS 65.0%
! TAGCCTTGGATGCAGCGCCG+GGG + chr1_4:76263849-76263868 None:intergenic 65.0%
!! CTAGCCTTGGATGCAGCGCC+GGG + chr1_4:76263850-76263869 None:intergenic 65.0%
!! CCTAGCCTTGGATGCAGCGC+CGG + chr1_4:76263851-76263870 None:intergenic 65.0%
CGGCGCTGCATCCAAGGCTA+GGG - chr1_4:76263849-76263868 Msa0185640:CDS 65.0%
ACGGGTGGACGAGGAGGAGG+AGG + chr1_4:76263790-76263809 None:intergenic 70.0%
TCGACGGGTGGACGAGGAGG+AGG + chr1_4:76263793-76263812 None:intergenic 70.0%
GCCATGTCGACGGGTGGACG+AGG + chr1_4:76263799-76263818 None:intergenic 70.0%
CCGGCGCTGCATCCAAGGCT+AGG - chr1_4:76263848-76263867 Msa0185640:CDS 70.0%
GAGGCCGCGGACGGCGGAAA+TGG + chr1_4:76263771-76263790 None:intergenic 75.0%
GAGGAGGAGGAGGCCGCGGA+CGG + chr1_4:76263780-76263799 None:intergenic 75.0%
GGACGAGGAGGAGGAGGCCG+CGG + chr1_4:76263784-76263803 None:intergenic 75.0%
! CCTTGGATGCAGCGCCGGGG+CGG + chr1_4:76263846-76263865 None:intergenic 75.0%
! GAGGAGGAGGCCGCGGACGG+CGG + chr1_4:76263777-76263796 None:intergenic 80.0%
! CCGCCCCGGCGCTGCATCCA+AGG - chr1_4:76263843-76263862 Msa0185640:CDS 80.0%
!! TGCAGCGCCGGGGCGGCGAG+TGG + chr1_4:76263839-76263858 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 76263463 76270298 76263463 ID=Msa0185640;Name=Msa0185640
chr1_4 mRNA 76263463 76270298 76263463 ID=Msa0185640-mRNA-1;Parent=Msa0185640;Name=Msa0185640-mRNA-1;_AED=0.15;_eAED=0.15;_QI=132|0.88|0.9|1|1|1|10|355|400
chr1_4 exon 76263463 76263877 76263463 ID=Msa0185640-mRNA-1:exon:25933;Parent=Msa0185640-mRNA-1
chr1_4 exon 76264665 76264733 76264665 ID=Msa0185640-mRNA-1:exon:25932;Parent=Msa0185640-mRNA-1
chr1_4 exon 76264808 76264871 76264808 ID=Msa0185640-mRNA-1:exon:25931;Parent=Msa0185640-mRNA-1
chr1_4 exon 76264973 76265055 76264973 ID=Msa0185640-mRNA-1:exon:25930;Parent=Msa0185640-mRNA-1
chr1_4 exon 76265479 76265544 76265479 ID=Msa0185640-mRNA-1:exon:25929;Parent=Msa0185640-mRNA-1
chr1_4 exon 76265727 76265817 76265727 ID=Msa0185640-mRNA-1:exon:25928;Parent=Msa0185640-mRNA-1
chr1_4 exon 76266619 76266776 76266619 ID=Msa0185640-mRNA-1:exon:25927;Parent=Msa0185640-mRNA-1
chr1_4 exon 76267832 76267966 76267832 ID=Msa0185640-mRNA-1:exon:25926;Parent=Msa0185640-mRNA-1
chr1_4 exon 76269559 76269688 76269559 ID=Msa0185640-mRNA-1:exon:25925;Parent=Msa0185640-mRNA-1
chr1_4 exon 76269820 76270298 76269820 ID=Msa0185640-mRNA-1:exon:25924;Parent=Msa0185640-mRNA-1
chr1_4 five_prime_UTR 76270167 76270298 76270167 ID=Msa0185640-mRNA-1:five_prime_utr;Parent=Msa0185640-mRNA-1
chr1_4 CDS 76269820 76270166 76269820 ID=Msa0185640-mRNA-1:cds;Parent=Msa0185640-mRNA-1
chr1_4 CDS 76269559 76269688 76269559 ID=Msa0185640-mRNA-1:cds;Parent=Msa0185640-mRNA-1
chr1_4 CDS 76267832 76267966 76267832 ID=Msa0185640-mRNA-1:cds;Parent=Msa0185640-mRNA-1
chr1_4 CDS 76266619 76266776 76266619 ID=Msa0185640-mRNA-1:cds;Parent=Msa0185640-mRNA-1
chr1_4 CDS 76265727 76265817 76265727 ID=Msa0185640-mRNA-1:cds;Parent=Msa0185640-mRNA-1
chr1_4 CDS 76265479 76265544 76265479 ID=Msa0185640-mRNA-1:cds;Parent=Msa0185640-mRNA-1
chr1_4 CDS 76264973 76265055 76264973 ID=Msa0185640-mRNA-1:cds;Parent=Msa0185640-mRNA-1
chr1_4 CDS 76264808 76264871 76264808 ID=Msa0185640-mRNA-1:cds;Parent=Msa0185640-mRNA-1
chr1_4 CDS 76264665 76264733 76264665 ID=Msa0185640-mRNA-1:cds;Parent=Msa0185640-mRNA-1
chr1_4 CDS 76263818 76263877 76263818 ID=Msa0185640-mRNA-1:cds;Parent=Msa0185640-mRNA-1
chr1_4 three_prime_UTR 76263463 76263817 76263463 ID=Msa0185640-mRNA-1:three_prime_utr;Parent=Msa0185640-mRNA-1
Gene Sequence

>Msa0185640

ATGGCCGTAAAACATTTGCAATTCCAATTCAACTTGTCGCGCGATAGATTGGTCTTTCTCTTTCGAACATCTCAATCTCATTCTTTATTTCCTTATAATAATAAATTCCCCAAATCTTTTCTCTCTTTCTTCCTCCGCCGCTCCTCCTCAACAACTCCGTCACCGCCGAACAACCATTTCCGCCGTCCGCGGCCTCCTCCTCCTCGTCCACCCGTCGACATGGCGCAGAAATTCGGAAAATCCACTCGCCGCCCCGGCGCTGCATCCAAGGCTAGGGTTTATGCTGATGTCAACGTCGTTCGTCCTAAGGAATATTGGGATTACGAAACCCTCACCGTTCAGTGGGGGGAGCAAGATGATTATGAGGTGGTGAGGAAAGTGGGAAGGGGGAAATACAGTGAGGTTTTTGAAGGTGTTCATTGTACTGATAATGAAAAATGTGTTATCAAGATTCTCAAACCTGTTAAGAAGAAGAAGATCAAGAGGGAAATCAAAATATTACAGAATCTTTGTGGAGGGCCCAATATTGTAAAGTTGCTTGACATTGTTAGAGACCAGCAGTCGAAGACCCCAAGTCTCATATTTGAATATGTCAACAACACTGATTTTAAAGCATTGGATTATTGCCATTCGCAAGGGATTATGCATCGGGATGTGAAGCCCCATAATGTAATGATTGACCATGAGCAGCGTAAGCTTCGCCTTATAGATTGGGGGCTTGCAGAGTTCTATCATCCTGGGAAGGAATATAATGTTCGTGTGGCTTCAAGATATTTCAAAGGCCCAGAGCTTCTTGTTGATCTTCAAGACTATGATTACTCTCTAGATTTGTGGAGTCTTGGTTGTATGTTTGCCGGGATGATATTCCGGAAGGAGCCGTTCTTTTATGGTCACGATAACTATGATCAACTGGTCAAGATAGCCAGGGTACTTGGGACGGATGAATTAAATACATATTTGAATAAGTATCGCATTGAGTTGGACCCACATTTTGCAGCACTTATTGGGAGGCATAGCAGGAAGCCATGGCAAAGGTTCATTAATGTTGAAAATCAACACTTGACTGTTCCTGAGGCTGTTGACTTTGTTGACAAGTTACTACGATACGATCACCAAGAACGGCCCACTGCAAAAGAAGCCATGGCCCATCCATACTTCAATCCAATTAGAAATGTGGAAAGTAGCAGAGCTCGTGCACATTGA
Protein sequence

>Msa0185640

MAVKHLQFQFNLSRDRLVFLFRTSQSHSLFPYNNKFPKSFLSFFLRRSSSTTPSPPNNHFRRPRPPPPRPPVDMAQKFGKSTRRPGAASKARVYADVNVVRPKEYWDYETLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEKCVIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIARVLGTDELNTYLNKYRIELDPHFAALIGRHSRKPWQRFINVENQHLTVPEAVDFVDKLLRYDHQERPTAKEAMAHPYFNPIRNVESSRARAH*