AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0568340


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0568340 MtrunA17_Chr4g0052681 79.027 596 122 1 1 593 1 596 0.0 948
Msa0568340 MtrunA17_Chr8g0383081 75.215 581 138 4 1 581 1 575 0.0 900
Msa0568340 MtrunA17_Chr8g0383041 70.627 606 160 4 10 601 1 602 0.0 844
Msa0568340 MtrunA17_Chr8g0383071 75.945 291 70 0 79 369 20 310 1.24e-161 464
Msa0568340 MtrunA17_Chr8g0383051 71.565 313 86 3 1 311 14 325 1.39e-158 457
Msa0568340 MtrunA17_Chr8g0383061 80.088 226 41 1 355 580 1 222 1.23e-119 354
Msa0568340 MtrunA17_Chr8g0383211 34.483 580 354 10 3 566 77 646 3.38e-99 316
Msa0568340 MtrunA17_Chr8g0383091 91.781 146 10 1 355 500 1 144 1.40e-90 276
Msa0568340 MtrunA17_Chr2g0308821 29.725 545 373 5 22 561 125 664 3.82e-84 276
Msa0568340 MtrunA17_Chr7g0263231 30.361 527 359 5 33 555 546 1068 1.37e-83 283
Msa0568340 MtrunA17_Chr8g0359341 30.811 555 362 7 8 557 171 708 6.30e-80 266
Msa0568340 MtrunA17_Chr8g0354631 29.799 547 352 13 33 555 164 702 5.09e-79 265
Msa0568340 MtrunA17_Chr7g0263261 30.056 539 367 6 21 555 477 1009 9.05e-79 269
Msa0568340 MtrunA17_Chr4g0003151 27.087 539 382 6 25 555 124 659 1.30e-76 256
Msa0568340 MtrunA17_Chr2g0333261 28.022 546 378 8 21 556 139 679 5.48e-75 253
Msa0568340 MtrunA17_Chr5g0402891 27.140 549 380 9 43 577 59 601 3.79e-67 230
Msa0568340 MtrunA17_Chr4g0053391 41.111 270 146 4 305 572 1 259 4.02e-62 207
Msa0568340 MtrunA17_Chr4g0052601 35.093 322 197 5 20 334 106 422 3.89e-55 192
Msa0568340 MtrunA17_Chr1g0192041 42.857 182 103 1 256 436 60 241 3.99e-44 157
Msa0568340 MtrunA17_Chr4g0062411 24.863 547 376 11 35 574 150 668 3.33e-37 147
Msa0568340 MtrunA17_Chr5g0408131 34.389 221 136 4 355 573 23 236 1.65e-35 134
Msa0568340 MtrunA17_Chr8g0383181 33.500 200 116 6 28 213 94 290 3.83e-24 103
Msa0568340 MtrunA17_Chr8g0383171 30.102 196 122 4 377 567 58 243 1.17e-21 95.1
Msa0568340 MtrunA17_Chr4g0052611 30.455 220 118 7 349 555 6 203 3.96e-21 93.2
Msa0568340 MtrunA17_Chr3g0108001 43.269 104 48 3 487 588 5 99 1.16e-19 84.7
Msa0568340 MtrunA17_Chr8g0390371 41.026 78 46 0 487 564 9 86 2.58e-16 74.3
Msa0568340 MtrunA17_Chr1g0162951 50.980 51 25 0 508 558 1 51 5.71e-12 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0568340 AT3G42170.2 31.120 527 337 7 33 555 148 652 2.34e-90 293
Msa0568340 AT3G42170.1 31.120 527 337 7 33 555 170 674 2.79e-90 293
Msa0568340 AT1G18560.1 24.441 581 370 18 37 585 145 688 1.51e-28 121

Find 101 sgRNAs with CRISPR-Local

Find 724 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGCAAGTTTGACAAATTT+TGG 0.118977 4_1:+69961310 Msa0568340:CDS
TCTCATCTTGGTTTGCAAAA+TGG 0.163789 4_1:+69960769 Msa0568340:CDS
GTTATGGTTTATGCACTTAC+TGG 0.226923 4_1:+69962317 Msa0568340:three_prime_UTR
CTCATCTTGGTTTGCAAAAT+GGG 0.245980 4_1:+69960770 Msa0568340:CDS
GAGTAGAAGGGAGAAATTTA+AGG 0.250530 4_1:+69960930 Msa0568340:CDS
ACGAAGTTGTACATGCTATT+TGG 0.252127 4_1:+69961459 Msa0568340:CDS
TGGCATGCAAAGTACTATTC+AGG 0.287867 4_1:+69961509 Msa0568340:CDS
TGAGGCATTCAAAGAGTAGA+AGG 0.319331 4_1:+69960917 Msa0568340:CDS
ATGTTGGCAGTTTCACAAAA+AGG 0.324708 4_1:-69961162 None:intergenic
TTACTTAGATGAATCAAGTT+TGG 0.331942 4_1:+69961752 Msa0568340:CDS
AAAGTTAAAGATATCCTATT+AGG 0.333650 4_1:-69960508 None:intergenic
ATTTCCAGATCTATCAATCT+TGG 0.351942 4_1:+69961833 Msa0568340:CDS
ATCTAAGCTTCAACAAGAAT+TGG 0.358923 4_1:+69960477 Msa0568340:CDS
TCTAGCCAAAGTACTTCTTC+TGG 0.359157 4_1:+69961489 Msa0568340:CDS
ATTCTAGCTTCCACATTCAT+AGG 0.364577 4_1:-69961954 None:intergenic
CTTCAATAACAAGTTGTTGA+TGG 0.370337 4_1:-69961707 None:intergenic
TGATTGAATTGTTGAATGAT+TGG 0.374490 4_1:+69960671 Msa0568340:CDS
TACAGTGTTGTTCTTGCATT+GGG 0.376545 4_1:+69961339 Msa0568340:CDS
AATTGGCTACCATTCCTAAT+AGG 0.389770 4_1:+69960494 Msa0568340:CDS
GTAGGAGGTATAACAGCATT+TGG 0.404852 4_1:-69960409 None:intergenic
GATTGAATTGTTGAATGATT+GGG 0.408790 4_1:+69960672 Msa0568340:CDS
CAACAACTTGTTATTGAAGC+TGG 0.409267 4_1:+69961711 Msa0568340:CDS
TATGTATGGCTGCTTGGTTA+TGG 0.420210 4_1:+69962301 Msa0568340:three_prime_UTR
TAGTTCTGTTCGCTTGCATC+AGG 0.424044 4_1:+69960981 Msa0568340:CDS
CTCTCGCCGCCGTCTCCTTA+CGG 0.425085 4_1:+69959978 Msa0568340:five_prime_UTR
GTTTAGATTAAAACTATGTA+TGG 0.425819 4_1:+69962287 Msa0568340:three_prime_UTR
TTTAAATTTGATTATTGAAG+AGG 0.430095 4_1:+69960840 Msa0568340:CDS
TTGAAAGTGCTCTTAAATAT+CGG 0.431487 4_1:+69961040 Msa0568340:CDS
GCACTGGCATGGTAGAAGAT+TGG 0.432488 4_1:-69961533 None:intergenic
TGAAAGTCTTCACTTGTATG+AGG 0.439474 4_1:+69961071 Msa0568340:CDS
GAACAATTGAAATCTCATCT+TGG 0.445749 4_1:+69960757 Msa0568340:CDS
CAAGCCAAGATTGATAGATC+TGG 0.449154 4_1:-69961837 None:intergenic
ATTTAAGGAATGCATTGAAA+AGG 0.457935 4_1:+69960945 Msa0568340:CDS
GTCACTCATTTGTACATGAA+AGG 0.459961 4_1:+69960451 Msa0568340:CDS
TTAAATTTGATTATTGAAGA+GGG 0.460758 4_1:+69960841 Msa0568340:CDS
TGTAGTGTTTACCCTGCCAC+TGG 0.464555 4_1:+69960628 Msa0568340:CDS
TAAAACTATGTATGGCTGCT+TGG 0.470142 4_1:+69962295 Msa0568340:three_prime_UTR
TCACTCATTTGTACATGAAA+GGG 0.472542 4_1:+69960452 Msa0568340:CDS
TCAAAGCGAATCACGGGTTG+TGG 0.477617 4_1:+69960297 Msa0568340:CDS
TGTGATGGAGAGTTCTTTCA+CGG 0.480748 4_1:+69960799 Msa0568340:CDS
TAATTATGAGTTATGTCCTT+CGG 0.481954 4_1:+69961095 Msa0568340:CDS
CACATCTCACCACCAGTGGC+AGG 0.482440 4_1:-69960640 None:intergenic
CAAAATGGGTTGTTGTGTGA+TGG 0.482766 4_1:+69960784 Msa0568340:CDS
AAAGGAAGTTGCAACTAGTA+AGG 0.484075 4_1:+69961436 Msa0568340:CDS
ATCAGAAGCGACGGTGGCAA+TGG 0.488246 4_1:-69961877 None:intergenic
GCATGCCAGAAGAAGTACTT+TGG 0.489819 4_1:-69961494 None:intergenic
AAGGAATGCATTGAAAAGGT+TGG 0.494889 4_1:+69960949 Msa0568340:CDS
CCACATTCATAGGCAGCATA+AGG 0.497176 4_1:-69961944 None:intergenic
TAAGCCTCAAGAACATTTGT+AGG 0.497271 4_1:-69960427 None:intergenic
TAGTTGCAACTTCCTTTCAC+AGG 0.501132 4_1:-69961430 None:intergenic
GAAATTATGAATGAAATTGA+CGG 0.501191 4_1:+69962144 Msa0568340:CDS
TCAGAAGCGACGGTGGCAAT+GGG 0.501296 4_1:-69961876 None:intergenic
AACTCCAAGTCTTTATCTCA+CGG 0.512124 4_1:+69961561 Msa0568340:CDS
GGCATGCAAAGTACTATTCA+GGG 0.514294 4_1:+69961510 Msa0568340:CDS
TGAGCGGTCAAACAAATGTA+AGG 0.517830 4_1:-69960559 None:intergenic
ATGGTTTATGCACTTACTGG+TGG 0.518792 4_1:+69962320 Msa0568340:three_prime_UTR
ATTGAATTGTTGAATGATTG+GGG 0.520151 4_1:+69960673 Msa0568340:CDS
ACGTGTTCTAGTTGATACTC+TGG 0.523550 4_1:+69961245 Msa0568340:CDS
CTAGAATTTGTACTCGCAGT+TGG 0.528677 4_1:+69961970 Msa0568340:CDS
CTCTCCGATGTCTCATGCAC+AGG 0.536346 4_1:+69960004 Msa0568340:exon
ACCTCCTACAAATGTTCTTG+AGG 0.536836 4_1:+69960423 Msa0568340:CDS
TAAAGATATCCTATTAGGAA+TGG 0.555256 4_1:-69960503 None:intergenic
GGTAGATCAAAGCGAATCAC+GGG 0.561365 4_1:+69960291 Msa0568340:CDS
AGGTAGATCAAAGCGAATCA+CGG 0.562854 4_1:+69960290 Msa0568340:CDS
CTCGAAATCAGAAGCGACGG+TGG 0.563509 4_1:-69961883 None:intergenic
CGTTGTGTCATTAATCATGT+TGG 0.563914 4_1:-69961178 None:intergenic
TAAATTTGATTATTGAAGAG+GGG 0.567391 4_1:+69960842 Msa0568340:CDS
CCTTATGCTGCCTATGAATG+TGG 0.570956 4_1:+69961944 Msa0568340:CDS
TGTTGTTCTTGCATTGGGAG+CGG 0.571678 4_1:+69961344 Msa0568340:CDS
GTACAGTGTTGTTCTTGCAT+TGG 0.574507 4_1:+69961338 Msa0568340:CDS
GAATTGGAAGTTAAACAGTA+AGG 0.575075 4_1:+69960594 Msa0568340:CDS
TATGTCCTTCGGCAGAAGAG+TGG 0.576340 4_1:+69961106 Msa0568340:CDS
ACATGGATGTATTAGAATGG+TGG 0.578505 4_1:+69961793 Msa0568340:CDS
TTGATGCATCAACCTGTGAA+AGG 0.579104 4_1:+69961418 Msa0568340:CDS
TGCTTGCTAATGTTTAATGT+CGG 0.580071 4_1:+69962403 Msa0568340:three_prime_UTR
TTATGAAGAGAATGGCTGAA+AGG 0.593683 4_1:+69961283 Msa0568340:CDS
TTCACACATCTCACCACCAG+TGG 0.597954 4_1:-69960644 None:intergenic
GCCTCAAGAACATTTGTAGG+AGG 0.599415 4_1:-69960424 None:intergenic
CGTGTTCTAGTTGATACTCT+GGG 0.603053 4_1:+69961246 Msa0568340:CDS
ATGTTGAAAATTTAATACGT+GGG 0.609160 4_1:-69961374 None:intergenic
TTTGATGATGACTGCGATGG+TGG 0.609880 4_1:+69962204 Msa0568340:CDS
CAAAGGGTAAATCAAGTGCA+AGG 0.611050 4_1:-69960339 None:intergenic
GAGAGAGCATCATGTTTGTG+AGG 0.611082 4_1:+69960899 Msa0568340:CDS
AAGACATGGATGTATTAGAA+TGG 0.611743 4_1:+69961790 Msa0568340:CDS
GGAGAGTCACCGTAAGGAGA+CGG 0.613693 4_1:-69959987 None:intergenic
GTGATGGAGAGTTCTTTCAC+GGG 0.615672 4_1:+69960800 Msa0568340:CDS
AGAAGAGAAAGTGACAAATG+AGG 0.619556 4_1:-69959944 None:intergenic
AGATGAAGTTATGAAGAGAA+TGG 0.624092 4_1:+69961275 Msa0568340:CDS
GACATCGGAGAGTCACCGTA+AGG 0.624904 4_1:-69959993 None:intergenic
AATGTTGAAAATTTAATACG+TGG 0.625350 4_1:-69961375 None:intergenic
AATACCTGTGCATGAGACAT+CGG 0.628701 4_1:-69960008 None:intergenic
AGTGTTTACCCTGCCACTGG+TGG 0.629471 4_1:+69960631 Msa0568340:CDS
ACATCTCACCACCAGTGGCA+GGG 0.637351 4_1:-69960639 None:intergenic
AAACTCGAAATCAGAAGCGA+CGG 0.639989 4_1:-69961886 None:intergenic
AAGTGACAAATGAGGTACGC+GGG 0.645947 4_1:-69959936 None:intergenic
GAGGCATTCAAAGAGTAGAA+GGG 0.646358 4_1:+69960918 Msa0568340:CDS
TAAACCGTGAGATAAAGACT+TGG 0.651980 4_1:-69961565 None:intergenic
TGGAGCACGAGGGAATGAGG+AGG 0.698468 4_1:+69960368 Msa0568340:CDS
ATTCGCGTCAACAAAATGAG+CGG 0.717347 4_1:-69960575 None:intergenic
GAGTCACCGTAAGGAGACGG+CGG 0.730294 4_1:-69959984 None:intergenic
AAAGTGACAAATGAGGTACG+CGG 0.764153 4_1:-69959937 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTCTTATAATAAAAAGA+AGG - chr4_1:69952711-69952730 None:intergenic 10.0%
!! CATATTCTAATATAAATAAA+TGG - chr4_1:69953641-69953660 None:intergenic 10.0%
!!! TCTTTTTTAATTATCAAAAA+TGG - chr4_1:69953710-69953729 None:intergenic 10.0%
!!! TTTTGATAATTAAAAAAGAA+AGG + chr4_1:69953711-69953730 Msa0568340:intron 10.0%
!!! TTTGATAATTAAAAAAGAAA+GGG + chr4_1:69953712-69953731 Msa0568340:intron 10.0%
!!! GATTCATTTTATTTTATTTT+TGG - chr4_1:69953843-69953862 None:intergenic 10.0%
!!! TGTAAGTTTATATATATTTT+TGG + chr4_1:69955714-69955733 Msa0568340:intron 10.0%
!!! AGTAATTTATGTAATAATTT+TGG + chr4_1:69957580-69957599 Msa0568340:intron 10.0%
!!! GTAATTTATGTAATAATTTT+GGG + chr4_1:69957581-69957600 Msa0568340:intron 10.0%
!! AGACTTAATATTAAAAAAAA+TGG - chr4_1:69958080-69958099 None:intergenic 10.0%
!!! TTTTTTTAATATTAAGTCTA+CGG + chr4_1:69958081-69958100 Msa0568340:intron 10.0%
!! TTTCTTCTAATAAAAATTTA+AGG - chr4_1:69959765-69959784 None:intergenic 10.0%
!! AAAAAGAAAAAAAAACAAAA+AGG + chr4_1:69959789-69959808 Msa0568340:intron 10.0%
!!! TGTAAGTTTATTTATATTTT+TGG + chr4_1:69961593-69961612 Msa0568340:intron 10.0%
!! TGTTATAATTGAATTGAAAA+GGG - chr4_1:69950141-69950160 None:intergenic 15.0%
!! TTGTTATAATTGAATTGAAA+AGG - chr4_1:69950142-69950161 None:intergenic 15.0%
!! TATATAAACTTACATTGAAT+AGG - chr4_1:69951557-69951576 None:intergenic 15.0%
!!! TTGATTTATAATGTTTGTTT+TGG + chr4_1:69952221-69952240 Msa0568340:intron 15.0%
!!! GTTTTATCTTTTAAATTGTT+AGG + chr4_1:69952243-69952262 Msa0568340:intron 15.0%
!!! ATCTAATTTTTCTTTTGATT+TGG + chr4_1:69952939-69952958 Msa0568340:intron 15.0%
!!! TTGATAATTAAAAAAGAAAG+GGG + chr4_1:69953713-69953732 Msa0568340:intron 15.0%
!! TATATAAACTTACATCAAAT+AGG - chr4_1:69955708-69955727 None:intergenic 15.0%
!!! ATTTTATATGTTTGTGATTA+TGG + chr4_1:69956457-69956476 Msa0568340:intron 15.0%
!!! ATTTGTTTACTTTTTAATGT+TGG + chr4_1:69956506-69956525 Msa0568340:intron 15.0%
!! ATATGATAAAAGATTATGTA+AGG + chr4_1:69957056-69957075 Msa0568340:intron 15.0%
!! TATGATAAAAGATTATGTAA+GGG + chr4_1:69957057-69957076 Msa0568340:intron 15.0%
!! TAAAATAATGTCAATTAACT+AGG + chr4_1:69957866-69957885 Msa0568340:intron 15.0%
!!! AAAATCCCAAAATTTAAAAT+AGG + chr4_1:69957999-69958018 Msa0568340:intron 15.0%
!!! AAATCCCAAAATTTAAAATA+GGG + chr4_1:69958000-69958019 Msa0568340:intron 15.0%
!! ATTCAAAATTAGTGAAAAAT+AGG + chr4_1:69958031-69958050 Msa0568340:intron 15.0%
!! TTCAAAATTAGTGAAAAATA+GGG + chr4_1:69958032-69958051 Msa0568340:intron 15.0%
!!! TGTTATCATCAAAATAATTT+TGG + chr4_1:69958473-69958492 Msa0568340:intron 15.0%
!!! AAGTAAGTTTTTATGAAATT+CGG + chr4_1:69958949-69958968 Msa0568340:intron 15.0%
!!! GCTTTATTTTTCATTTAAAA+AGG - chr4_1:69959198-69959217 None:intergenic 15.0%
!!! TAGTATATTTTAAGACAATT+TGG - chr4_1:69959306-69959325 None:intergenic 15.0%
!!! TTTTGTCAAAATATCAAATT+TGG + chr4_1:69959475-69959494 Msa0568340:intron 15.0%
!!! GATTATATTTTAACACTAAA+AGG - chr4_1:69959517-69959536 None:intergenic 15.0%
!! TTGATACAAAAACATAATAA+AGG + chr4_1:69959606-69959625 Msa0568340:intron 15.0%
!!! TATCTTTAACTTTTGATTTA+TGG + chr4_1:69960518-69960537 Msa0568340:CDS 15.0%
!!! ATCTTTAACTTTTGATTTAT+GGG + chr4_1:69960519-69960538 Msa0568340:CDS 15.0%
!! TTTAAATTTGATTATTGAAG+AGG + chr4_1:69960840-69960859 Msa0568340:CDS 15.0%
!! TTAAATTTGATTATTGAAGA+GGG + chr4_1:69960841-69960860 Msa0568340:CDS 15.0%
!!! TTTAGTTTATGATGATTTTT+TGG + chr4_1:69962257-69962276 Msa0568340:three_prime_UTR 15.0%
!!! TGTTTTTAATTTTTATTGTG+TGG + chr4_1:69962373-69962392 Msa0568340:three_prime_UTR 15.0%
!! GTTATAATTGAATTGAAAAG+GGG - chr4_1:69950140-69950159 None:intergenic 20.0%
!! ATTATGTTGAAATGTAATCT+AGG + chr4_1:69950195-69950214 Msa0568340:intron 20.0%
!!! AAATATGGAATTTGATAACA+AGG + chr4_1:69950240-69950259 Msa0568340:intron 20.0%
!! AAAGTTAAAGATATCCTATT+AGG - chr4_1:69950481-69950500 None:intergenic 20.0%
!!! TATCTTTAACTTTTGATTTG+TGG + chr4_1:69950488-69950507 Msa0568340:intron 20.0%
!!! ATCTTTAACTTTTGATTTGT+GGG + chr4_1:69950489-69950508 Msa0568340:intron 20.0%
!! GAATAGAAGGAAAAAATTTA+AGG + chr4_1:69950900-69950919 Msa0568340:intron 20.0%
!! AGATAAAGTTATAAAGAGAA+TGG + chr4_1:69951245-69951264 Msa0568340:intron 20.0%
!! AAATTAAAGTCTTTATCTCA+CGG + chr4_1:69951531-69951550 Msa0568340:intron 20.0%
!! TTACTTAGATGAATCAAATT+TGG + chr4_1:69951715-69951734 Msa0568340:intron 20.0%
!!! TTTTCATTGTTATGAAGATA+TGG + chr4_1:69951739-69951758 Msa0568340:intron 20.0%
!!! TTATACAATTTTGTAAGCAA+TGG + chr4_1:69951956-69951975 Msa0568340:intron 20.0%
!! ATAATGAATGAAATTGACAA+TGG + chr4_1:69952110-69952129 Msa0568340:intron 20.0%
!!! TCTTTTAAATTGTTAGGATA+TGG + chr4_1:69952249-69952268 Msa0568340:intron 20.0%
!!! TTGTTTTAACTTGTAATATG+TGG + chr4_1:69952316-69952335 Msa0568340:intron 20.0%
!!! AAAAAATTATGTTTTACTGC+CGG - chr4_1:69952864-69952883 None:intergenic 20.0%
!! CTAAAATTATTCTAGATAGT+TGG + chr4_1:69952988-69953007 Msa0568340:intron 20.0%
!! AATATGATTTATACAGTTAG+AGG + chr4_1:69953084-69953103 Msa0568340:intron 20.0%
!! TATTTGTATGCATAAAATTC+CGG + chr4_1:69953224-69953243 Msa0568340:intron 20.0%
!!! TGATTAATTTTTTGTTCAGT+CGG + chr4_1:69953288-69953307 Msa0568340:intron 20.0%
!!! CTTTTAGTATAAAATTTGTC+CGG - chr4_1:69953674-69953693 None:intergenic 20.0%
!!! CAAATCTCTCTAAAAAATTA+AGG + chr4_1:69953741-69953760 Msa0568340:intron 20.0%
!! TCAATTGAATTAAGCTTATA+AGG - chr4_1:69953892-69953911 None:intergenic 20.0%
!! ATAAGCTTAATTCAATTGAT+AGG + chr4_1:69953893-69953912 Msa0568340:intron 20.0%
!! TAAGCCTTAATAACATTTAT+AGG - chr4_1:69954554-69954573 None:intergenic 20.0%
!!! TTTAAAATTGATTGTTGAAG+AGG + chr4_1:69954961-69954980 Msa0568340:intron 20.0%
!! TTAAAATTGATTGTTGAAGA+GGG + chr4_1:69954962-69954981 Msa0568340:intron 20.0%
!!! AAAAAATACATGTTTGAAGT+AGG - chr4_1:69955328-69955347 None:intergenic 20.0%
!! ATTATATTTCACAAGTGAAA+AGG - chr4_1:69955792-69955811 None:intergenic 20.0%
!! TTTCACTTGTGAAATATAAT+AGG + chr4_1:69955792-69955811 Msa0568340:intron 20.0%
!! ACTACATATCATAATTGAAA+AGG - chr4_1:69956207-69956226 None:intergenic 20.0%
!! TTTCAATTATGATATGTAGT+TGG + chr4_1:69956207-69956226 Msa0568340:intron 20.0%
!!! GATGTTTGTTTTTGTTTTTA+TGG + chr4_1:69956376-69956395 Msa0568340:intron 20.0%
!! TTAAACTATATAGAGTTGTT+AGG + chr4_1:69956409-69956428 Msa0568340:intron 20.0%
!! GACTTAATAATAAGGAAATT+TGG - chr4_1:69956686-69956705 None:intergenic 20.0%
!!! TGAAACAATTCATAGATTTT+TGG + chr4_1:69956780-69956799 Msa0568340:intron 20.0%
!! ATGATAAAAGATTATGTAAG+GGG + chr4_1:69957058-69957077 Msa0568340:intron 20.0%
!! TATAACTATATATGGTTGTT+AGG + chr4_1:69957196-69957215 Msa0568340:intron 20.0%
!!! GATTTTGAATGTTTATGATT+TGG + chr4_1:69957243-69957262 Msa0568340:intron 20.0%
!! AAAATAAAGCTTGTAATATG+TGG + chr4_1:69957431-69957450 Msa0568340:intron 20.0%
!!! CTTAAAGTTTTGTTAAAATG+TGG - chr4_1:69957632-69957651 None:intergenic 20.0%
!!! TAACAAAACTTTAAGATGTT+AGG + chr4_1:69957637-69957656 Msa0568340:intron 20.0%
!! ACAAAATAAAAGTTGAAACT+AGG - chr4_1:69957782-69957801 None:intergenic 20.0%
!!! AATAAAAAAAGCACATGAAA+AGG - chr4_1:69957830-69957849 None:intergenic 20.0%
!! AGGAAAAATGAGTTTAAATA+TGG + chr4_1:69957941-69957960 Msa0568340:intron 20.0%
!! AAAATGAGTTTAAATATGGT+TGG + chr4_1:69957945-69957964 Msa0568340:intron 20.0%
!! TCAAAATTAGTGAAAAATAG+GGG + chr4_1:69958033-69958052 Msa0568340:intron 20.0%
!!! TTTTAATTAACTACTTCTAG+TGG + chr4_1:69958221-69958240 Msa0568340:intron 20.0%
!!! ATATTGCATTTTATATGCAT+GGG - chr4_1:69958611-69958630 None:intergenic 20.0%
!! CGTAATGAATCAAATATTTA+AGG - chr4_1:69958686-69958705 None:intergenic 20.0%
!! ATTAAGTTTAGGGAATTATA+TGG + chr4_1:69958766-69958785 Msa0568340:intron 20.0%
!! TTAAGTTTAGGGAATTATAT+GGG + chr4_1:69958767-69958786 Msa0568340:intron 20.0%
!!! ATGACTAGTGTTTTTTTTAT+GGG - chr4_1:69959076-69959095 None:intergenic 20.0%
!!! TATGACTAGTGTTTTTTTTA+TGG - chr4_1:69959077-69959096 None:intergenic 20.0%
!! TATTTGGACTTATAAAATTG+TGG - chr4_1:69959263-69959282 None:intergenic 20.0%
!! TTAATGAGTGTATGTATATT+TGG - chr4_1:69959279-69959298 None:intergenic 20.0%
!! ATATATTTGAATACGAAGTA+TGG - chr4_1:69959369-69959388 None:intergenic 20.0%
!! ACAAAAACATAATAAAGGTT+TGG + chr4_1:69959611-69959630 Msa0568340:intron 20.0%
!!! ATAATAAAGGTTTGGTTTAA+TGG + chr4_1:69959619-69959638 Msa0568340:intron 20.0%
!!! TTAAATTCCTACAAAAGTAT+TGG - chr4_1:69959673-69959692 None:intergenic 20.0%
!!! TTAAAGACAACTTTTTACAA+AGG - chr4_1:69959705-69959724 None:intergenic 20.0%
!! CTTCTAATAAAAATTTAAGG+TGG - chr4_1:69959762-69959781 None:intergenic 20.0%
!! TAAGATGAGCTAAAATTAAA+CGG + chr4_1:69959834-69959853 Msa0568340:intron 20.0%
!! GATAAGAACCTTATAAAAAA+AGG - chr4_1:69960046-69960065 None:intergenic 20.0%
!! AAAGTTAAAGATATCCTATT+AGG - chr4_1:69950481-69950500 None:intergenic 20.0%
!! TAAATTTGATTATTGAAGAG+GGG + chr4_1:69960842-69960861 Msa0568340:CDS 20.0%
!! AAAAAATACAAATTGGAAGT+AGG - chr4_1:69961207-69961226 None:intergenic 20.0%
!! AACTTGCAAAAAATACAAAT+TGG - chr4_1:69961214-69961233 None:intergenic 20.0%
!!! ATTTGTATTTTTTGCAAGTT+TGG + chr4_1:69961214-69961233 Msa0568340:CDS 20.0%
!! ATGTTGAAAATTTAATACGT+GGG - chr4_1:69961377-69961396 None:intergenic 20.0%
!! AATGTTGAAAATTTAATACG+TGG - chr4_1:69961378-69961397 None:intergenic 20.0%
!!! ACGTATTAAATTTTCAACAT+TGG + chr4_1:69961377-69961396 Msa0568340:CDS 20.0%
!! TTAAACAAATTCAAGATAGA+AGG - chr4_1:69955757-69955776 None:intergenic 20.0%
!! GAAATTATGAATGAAATTGA+CGG + chr4_1:69962144-69962163 Msa0568340:CDS 20.0%
!! GTTTAGATTAAAACTATGTA+TGG + chr4_1:69962287-69962306 Msa0568340:three_prime_UTR 20.0%
! ACTAAAGCTTAAACAAGAAT+TGG + chr4_1:69950447-69950466 Msa0568340:intron 25.0%
! TGATTGAATTGTTGAATGAT+TGG + chr4_1:69950641-69950660 Msa0568340:intron 25.0%
! GATTGAATTGTTGAATGATT+GGG + chr4_1:69950642-69950661 Msa0568340:intron 25.0%
! ATTGAATTGTTGAATGATTG+GGG + chr4_1:69950643-69950662 Msa0568340:intron 25.0%
!!! GTTGATTTTTCAAATGTTCT+AGG - chr4_1:69950726-69950745 None:intergenic 25.0%
!! AAAAAACACAAGTTTGAAGT+AGG - chr4_1:69951177-69951196 None:intergenic 25.0%
!!! GACTTTAATTTCTTTTGCAA+TGG - chr4_1:69951522-69951541 None:intergenic 25.0%
! AATGAGGTTAAACAAATTCA+AGG - chr4_1:69951606-69951625 None:intergenic 25.0%
! AAGATATGGATGTATTACAA+TGG + chr4_1:69951753-69951772 Msa0568340:intron 25.0%
!! GAGAAATAATAATCGATTTC+CGG + chr4_1:69951781-69951800 Msa0568340:intron 25.0%
!! TTCTGATTTTGAATTTTGCA+TGG + chr4_1:69951856-69951875 Msa0568340:intron 25.0%
!! TCTGATTTTGAATTTTGCAT+GGG + chr4_1:69951857-69951876 Msa0568340:intron 25.0%
! AATTGACAATGGTGAAAAAA+TGG + chr4_1:69952121-69952140 Msa0568340:intron 25.0%
! TCAATTTCTAATACATGCAT+AGG - chr4_1:69952445-69952464 None:intergenic 25.0%
!! TGAAACAGTTCATACATTTT+TGG + chr4_1:69952462-69952481 Msa0568340:intron 25.0%
!! ACTCAAAGATTCAAAGTTTT+CGG + chr4_1:69952532-69952551 Msa0568340:intron 25.0%
!!! ACACTTTCATATTTTGTTTG+AGG - chr4_1:69952791-69952810 None:intergenic 25.0%
!!! TTGATTTGGTGATAAAATAC+AGG + chr4_1:69952953-69952972 Msa0568340:intron 25.0%
! TAAAATCACGAAAAAACACA+AGG + chr4_1:69953588-69953607 Msa0568340:intron 25.0%
! TAGAATATGAGAAAAAGATC+CGG + chr4_1:69953652-69953671 Msa0568340:intron 25.0%
! ATAATTAAAAAAGAAAGGGG+TGG + chr4_1:69953716-69953735 Msa0568340:intron 25.0%
!! ATCTCTCTAAAAAATTAAGG+CGG + chr4_1:69953744-69953763 Msa0568340:intron 25.0%
!! ACAGTGTTGAAATGTAATTT+AGG + chr4_1:69954355-69954374 Msa0568340:intron 25.0%
! TAAAGATATCCTATTAGGAA+TGG - chr4_1:69950476-69950495 None:intergenic 25.0%
! ACAGTTAAAGATATCCTATT+AGG - chr4_1:69954635-69954654 None:intergenic 25.0%
!!! AAAATGGGTTGTTATGTAAT+GGG + chr4_1:69954906-69954925 Msa0568340:intron 25.0%
! TAAAATTGATTGTTGAAGAG+GGG + chr4_1:69954963-69954982 Msa0568340:intron 25.0%
!!! TTGAAAGTGCTCTTAAATAT+AGG + chr4_1:69951010-69951029 Msa0568340:intron 25.0%
! TAATTATGAGTTATGTCCTT+CGG + chr4_1:69955216-69955235 Msa0568340:intron 25.0%
!!! ACATGTATTTTTTGCAAGTT+TGG + chr4_1:69955335-69955354 Msa0568340:intron 25.0%
! AGATGAAGTTATAAAGAGAA+TGG + chr4_1:69955396-69955415 Msa0568340:intron 25.0%
! AGCTAAGTAAATATCAAGTT+GGG - chr4_1:69955857-69955876 None:intergenic 25.0%
!! TTTTCGTTGTTATGAAGATA+TGG + chr4_1:69955891-69955910 Msa0568340:intron 25.0%
! ATTTCCAGATCTTTCAATAT+TGG + chr4_1:69955948-69955967 Msa0568340:intron 25.0%
! TATATAGAGTTGTTAGGTTA+TGG + chr4_1:69956415-69956434 Msa0568340:intron 25.0%
! AGTATGTAATTCCATGTTTA+AGG + chr4_1:69956537-69956556 Msa0568340:intron 25.0%
!! TAATCTTGTTTCCTTAAACA+TGG - chr4_1:69956551-69956570 None:intergenic 25.0%
! AAATTTGGAGAATCAAAAGA+TGG - chr4_1:69956671-69956690 None:intergenic 25.0%
! TTCCTTATTATTAAGTCTAC+TGG + chr4_1:69956689-69956708 Msa0568340:intron 25.0%
!! TTGAAGAGTATACAATTACA+AGG + chr4_1:69956727-69956746 Msa0568340:intron 25.0%
!! GTTAGAATCATTAACCTTTT+GGG - chr4_1:69956818-69956837 None:intergenic 25.0%
!! AGTTAGAATCATTAACCTTT+TGG - chr4_1:69956819-69956838 None:intergenic 25.0%
!!! TTGCTTGTTTTACTTAACTT+TGG + chr4_1:69957139-69957158 Msa0568340:intron 25.0%
!! CTTTGGTTTATGATGTTTAT+TGG + chr4_1:69957156-69957175 Msa0568340:intron 25.0%
!!! ATGATGTTTATTGGCTTTTA+TGG + chr4_1:69957165-69957184 Msa0568340:intron 25.0%
! TATATATGGTTGTTAGGTTA+TGG + chr4_1:69957202-69957221 Msa0568340:intron 25.0%
! GTTAATACAATTTAGTGGTT+TGG + chr4_1:69957294-69957313 Msa0568340:intron 25.0%
!! GATATTTTATATGCAATCTC+AGG + chr4_1:69957324-69957343 Msa0568340:intron 25.0%
! ATACAAGAAGGAAAAAAATG+TGG - chr4_1:69957365-69957384 None:intergenic 25.0%
!!! GCTTTATTTTATTTTGCTAC+TGG - chr4_1:69957421-69957440 None:intergenic 25.0%
! ATTTGTTTCCTTTCTAATGT+TGG + chr4_1:69957454-69957473 Msa0568340:intron 25.0%
! AATAATGTCAATTAACTAGG+TGG + chr4_1:69957869-69957888 Msa0568340:intron 25.0%
! TCATATAATCCACATAAACA+CGG + chr4_1:69957911-69957930 Msa0568340:intron 25.0%
! GGTAAAATCAAGTACAAAAT+AGG + chr4_1:69957970-69957989 Msa0568340:intron 25.0%
! AAAATCAAGTACAAAATAGG+AGG + chr4_1:69957973-69957992 Msa0568340:intron 25.0%
! AAATCAAGTACAAAATAGGA+GGG + chr4_1:69957974-69957993 Msa0568340:intron 25.0%
!!! ACCACCCTATTTTAAATTTT+GGG - chr4_1:69958007-69958026 None:intergenic 25.0%
!!! AACCACCCTATTTTAAATTT+TGG - chr4_1:69958008-69958027 None:intergenic 25.0%
! CAAAATTAGTGAAAAATAGG+GGG + chr4_1:69958034-69958053 Msa0568340:intron 25.0%
!! GAAACAGTTCATAGATTTTT+GGG + chr4_1:69958174-69958193 Msa0568340:intron 25.0%
! TGTTAAGACCAATTTATTCT+CGG - chr4_1:69958447-69958466 None:intergenic 25.0%
! AAAAAAAAAGAAGACCAAGT+TGG - chr4_1:69958514-69958533 None:intergenic 25.0%
!! GATATTGCATTTTATATGCA+TGG - chr4_1:69958612-69958631 None:intergenic 25.0%
! AAACTTAATCATTCAATGGA+TGG - chr4_1:69958755-69958774 None:intergenic 25.0%
! TCCATTGAATGATTAAGTTT+AGG + chr4_1:69958755-69958774 Msa0568340:intron 25.0%
! CCATTGAATGATTAAGTTTA+GGG + chr4_1:69958756-69958775 Msa0568340:intron 25.0%
! TAAGTTTAGGGAATTATATG+GGG + chr4_1:69958768-69958787 Msa0568340:intron 25.0%
!!! AGTGAGTTGGTATTTTTTTA+GGG - chr4_1:69958860-69958879 None:intergenic 25.0%
!!! TAGTGAGTTGGTATTTTTTT+AGG - chr4_1:69958861-69958880 None:intergenic 25.0%
! AATAAATGTTAGTAGTGAGT+TGG - chr4_1:69958873-69958892 None:intergenic 25.0%
! AAAAAACACTAGTCATAAAG+TGG + chr4_1:69959080-69959099 Msa0568340:intron 25.0%
! TGACAACTGAATATTAACAT+TGG + chr4_1:69959172-69959191 Msa0568340:intron 25.0%
! ATTAATGATGTTCAAAACTG+TGG + chr4_1:69959404-69959423 Msa0568340:intron 25.0%
!!! ATCAAGAGTATTATACTGTT+CGG - chr4_1:69959555-69959574 None:intergenic 25.0%
!! TGATGTCTTAATTTAAGGTA+GGG - chr4_1:69959735-69959754 None:intergenic 25.0%
!! ATGATGTCTTAATTTAAGGT+AGG - chr4_1:69959736-69959755 None:intergenic 25.0%
!! CTAATAAAAATTTAAGGTGG+AGG - chr4_1:69959759-69959778 None:intergenic 25.0%
!!! TCAAACTGCCTTTTTTTATA+AGG + chr4_1:69960035-69960054 Msa0568340:intron 25.0%
! AATGTTGGAGATTAAATTGA+CGG - chr4_1:69960095-69960114 None:intergenic 25.0%
!! TTTAATCTCCAACATTTTGA+CGG + chr4_1:69960099-69960118 Msa0568340:intron 25.0%
! TATAAAATCCGTCAAAATGT+TGG - chr4_1:69960110-69960129 None:intergenic 25.0%
!!! TGACGGATTTTATATACTTT+AGG + chr4_1:69960116-69960135 Msa0568340:intron 25.0%
!!! GACGGATTTTATATACTTTA+GGG + chr4_1:69960117-69960136 Msa0568340:intron 25.0%
!! ACGGATTTTATATACTTTAG+GGG + chr4_1:69960118-69960137 Msa0568340:intron 25.0%
! ATAATGCTGAAATGTAATCT+AGG + chr4_1:69960225-69960244 Msa0568340:intron 25.0%
!!! TGATTTACCCTTTGATTTTT+TGG + chr4_1:69960348-69960367 Msa0568340:CDS 25.0%
! TAAAGATATCCTATTAGGAA+TGG - chr4_1:69950476-69950495 None:intergenic 25.0%
! TGATTGAATTGTTGAATGAT+TGG + chr4_1:69950641-69950660 Msa0568340:intron 25.0%
! GATTGAATTGTTGAATGATT+GGG + chr4_1:69950642-69950661 Msa0568340:intron 25.0%
! ATTGAATTGTTGAATGATTG+GGG + chr4_1:69950643-69950662 Msa0568340:intron 25.0%
! ATTTAAGGAATGCATTGAAA+AGG + chr4_1:69960945-69960964 Msa0568340:CDS 25.0%
!!! TTGAAAGTGCTCTTAAATAT+CGG + chr4_1:69951010-69951029 Msa0568340:intron 25.0%
! TAATTATGAGTTATGTCCTT+CGG + chr4_1:69955216-69955235 Msa0568340:intron 25.0%
! TTACTTAGATGAATCAAGTT+TGG + chr4_1:69961752-69961771 Msa0568340:CDS 25.0%
! TCTACATATCAAAATTGAAG+AGG - chr4_1:69962096-69962115 None:intergenic 25.0%
!!! ATTTTGATATGTAGATGAAG+AGG + chr4_1:69962101-69962120 Msa0568340:intron 25.0%
!!! ATGATGATTTTTTGGCTTTA+TGG + chr4_1:69962265-69962284 Msa0568340:three_prime_UTR 25.0%
! TTGATAACAAGGTAGAACAA+AGG + chr4_1:69950251-69950270 Msa0568340:intron 30.0%
TGATAACAAGGTAGAACAAA+GGG + chr4_1:69950252-69950271 Msa0568340:intron 30.0%
!!! TGATTTGCCCTTTCATTTTT+TGG + chr4_1:69950318-69950337 Msa0568340:intron 30.0%
TAAGCCTCAATAACATTTGT+CGG - chr4_1:69950400-69950419 None:intergenic 30.0%
CAAACAAATATAAGTCTCAG+TGG - chr4_1:69950524-69950543 None:intergenic 30.0%
GAATTGGAAGTTGAATAGTA+AGG + chr4_1:69950564-69950583 Msa0568340:intron 30.0%
! AATCAACTTTGTTTGCGAAA+TGG + chr4_1:69950739-69950758 Msa0568340:intron 30.0%
! ATCAACTTTGTTTGCGAAAT+GGG + chr4_1:69950740-69950759 Msa0568340:intron 30.0%
! TTTAAAACTGATTGCTGAAG+AGG + chr4_1:69950810-69950829 Msa0568340:intron 30.0%
TTAAAACTGATTGCTGAAGA+GGG + chr4_1:69950811-69950830 Msa0568340:intron 30.0%
! GAAAAAATTTAAGGAGTGCA+TGG + chr4_1:69950909-69950928 Msa0568340:intron 30.0%
!!! ACTTGTGTTTTTTGCAAGTT+TGG + chr4_1:69951184-69951203 Msa0568340:intron 30.0%
AACTATCAACTAGAACACAT+TGG - chr4_1:69951215-69951234 None:intergenic 30.0%
TTATAAAGAGAATGGCTGAA+AGG + chr4_1:69951253-69951272 Msa0568340:intron 30.0%
! TAATTTCTTTTGCAATGGCA+TGG - chr4_1:69951517-69951536 None:intergenic 30.0%
ATTATATCTCACACGTGAAA+AGG - chr4_1:69951634-69951653 None:intergenic 30.0%
TTTCACGTGTGAGATATAAT+AGG + chr4_1:69951634-69951653 Msa0568340:intron 30.0%
ATATGGATGTATTACAATGG+TGG + chr4_1:69951756-69951775 Msa0568340:intron 30.0%
ATTTCCGGATCTATCAATAT+TGG + chr4_1:69951796-69951815 Msa0568340:intron 30.0%
!! AAAATTGACCACTTGTTATC+AGG - chr4_1:69952027-69952046 None:intergenic 30.0%
TCTACATATCACAATTGAAG+AGG - chr4_1:69952058-69952077 None:intergenic 30.0%
CTTCAATTGTGATATGTAGA+TGG + chr4_1:69952058-69952077 Msa0568340:intron 30.0%
!! GATTTTGAAGATGACAATGA+TGG + chr4_1:69952164-69952183 Msa0568340:intron 30.0%
TAAATTGTTAGGATATGGTC+TGG + chr4_1:69952254-69952273 Msa0568340:intron 30.0%
GCTTCAAGAATACAATTACA+AGG + chr4_1:69952405-69952424 Msa0568340:intron 30.0%
GTTGCAACTCTAAACTTTAA+AGG + chr4_1:69952484-69952503 Msa0568340:intron 30.0%
!! TAAAGGATTTTAACCACTAG+TGG + chr4_1:69952501-69952520 Msa0568340:intron 30.0%
!! ATTTTAACCACTAGTGGTTT+TGG + chr4_1:69952507-69952526 Msa0568340:intron 30.0%
!!! CACCATATTTTTTTGTGACT+GGG + chr4_1:69952653-69952672 Msa0568340:intron 30.0%
TACCCAGTCACAAAAAAATA+TGG - chr4_1:69952658-69952677 None:intergenic 30.0%
!!! TATTTTTTTGTGACTGGGTA+TGG + chr4_1:69952658-69952677 Msa0568340:intron 30.0%
!! CTTTCATATTTTGTTTGAGG+AGG - chr4_1:69952788-69952807 None:intergenic 30.0%
! TTTGGTGATAAAATACAGGA+AGG + chr4_1:69952957-69952976 Msa0568340:intron 30.0%
! ACCACATTTCTTTTTCTAAC+CGG - chr4_1:69953246-69953265 None:intergenic 30.0%
AAGAAATGTGGTTCAACTTA+TGG + chr4_1:69953254-69953273 Msa0568340:intron 30.0%
! GTTTTATCATGATTGATGCA+CGG + chr4_1:69953329-69953348 Msa0568340:intron 30.0%
! TTTTATCATGATTGATGCAC+GGG + chr4_1:69953330-69953349 Msa0568340:intron 30.0%
! GCTTATAAGGACTTGATTTT+TGG - chr4_1:69953879-69953898 None:intergenic 30.0%
AATGGGATAACTAAGAAATG+AGG - chr4_1:69954095-69954114 None:intergenic 30.0%
ATACTATTACACTGAAAGCT+AGG - chr4_1:69954267-69954286 None:intergenic 30.0%
CAAGAAAATGTGCAATCTAT+TGG + chr4_1:69954395-69954414 Msa0568340:intron 30.0%
CAAAGGGAAAATCATTTGAA+AGG - chr4_1:69954466-69954485 None:intergenic 30.0%
GCCTCCTATAAATGTTATTA+AGG + chr4_1:69954547-69954566 Msa0568340:intron 30.0%
GCCTTAATAACATTTATAGG+AGG - chr4_1:69954551-69954570 None:intergenic 30.0%
TATCTTTAACTGTTGATCTG+TGG + chr4_1:69954642-69954661 Msa0568340:intron 30.0%
ATCTTTAACTGTTGATCTGT+GGG + chr4_1:69954643-69954662 Msa0568340:intron 30.0%
GGTCAAACAAATATAAGTCT+CGG - chr4_1:69954681-69954700 None:intergenic 30.0%
GAACTATTGAAAACTCAACT+TGG + chr4_1:69954878-69954897 Msa0568340:intron 30.0%
!! CAAAATGGGTTGTTATGTAA+TGG + chr4_1:69954905-69954924 Msa0568340:intron 30.0%
!! AAATGGGTTGTTATGTAATG+GGG + chr4_1:69954907-69954926 Msa0568340:intron 30.0%
GAAACTGCTAACATGATTAA+TGG + chr4_1:69955292-69955311 Msa0568340:intron 30.0%
TTATAAAGAGAATGGCTGAA+AGG + chr4_1:69951253-69951272 Msa0568340:intron 30.0%
! TATAGTGTTGTTCTTGCATT+GGG + chr4_1:69955460-69955479 Msa0568340:intron 30.0%
! GACTTCAATTTCTTTTGCAA+TGG - chr4_1:69955673-69955692 None:intergenic 30.0%
AAATTGAAGTCTTCATCTCA+CGG + chr4_1:69955682-69955701 Msa0568340:intron 30.0%
CAGCTAAGTAAATATCAAGT+TGG - chr4_1:69955858-69955877 None:intergenic 30.0%
TTACTTAGCTGAGTCAAATT+TGG + chr4_1:69955867-69955886 Msa0568340:intron 30.0%
AAGATATGGATGTATTACAG+TGG + chr4_1:69955905-69955924 Msa0568340:intron 30.0%
! TTCTGATATGGATTTTTGCA+CGG + chr4_1:69956008-69956027 Msa0568340:intron 30.0%
AATCTAGCATCCAAATTCAT+CGG - chr4_1:69956072-69956091 None:intergenic 30.0%
AATTGACAGTGATGACTAAA+TGG + chr4_1:69956266-69956285 Msa0568340:intron 30.0%
CACAAACATATAAAATCCAC+CGG - chr4_1:69956453-69956472 None:intergenic 30.0%
TGCCAGTAGACTTAATAATA+AGG - chr4_1:69956694-69956713 None:intergenic 30.0%
ATTGTATACTCTTCAATGAC+AGG - chr4_1:69956723-69956742 None:intergenic 30.0%
! ATTACAAGGTTTGTTCAACA+TGG + chr4_1:69952419-69952438 Msa0568340:intron 30.0%
ATGATTCTAACTACATCTAG+TGG + chr4_1:69956827-69956846 Msa0568340:intron 30.0%
AAAATCATATGATGCATGTG+AGG - chr4_1:69956976-69956995 None:intergenic 30.0%
TCAGATTTCAATTAGTGAGT+TGG + chr4_1:69957027-69957046 Msa0568340:intron 30.0%
ATAAAAGATTATGTAAGGGG+TGG + chr4_1:69957061-69957080 Msa0568340:intron 30.0%
TCCTCGTTAATACAATTTAG+TGG + chr4_1:69957289-69957308 Msa0568340:intron 30.0%
ACCACTAAATTGTATTAACG+AGG - chr4_1:69957293-69957312 None:intergenic 30.0%
GTGTTCATTTCAAAATGTGT+TGG + chr4_1:69957387-69957406 Msa0568340:intron 30.0%
!! ACTTTAAGATGTTAGGTGTA+TGG + chr4_1:69957644-69957663 Msa0568340:intron 30.0%
ATGAGTTTAAATATGGTTGG+AGG + chr4_1:69957948-69957967 Msa0568340:intron 30.0%
TGAGTTTAAATATGGTTGGA+GGG + chr4_1:69957949-69957968 Msa0568340:intron 30.0%
! TCCCAAAATTTAAAATAGGG+TGG + chr4_1:69958003-69958022 Msa0568340:intron 30.0%
! AAAATAGGGGGCATATAAAA+CGG + chr4_1:69958046-69958065 Msa0568340:intron 30.0%
AATTGTACTCTTCAATGACA+GGG - chr4_1:69958117-69958136 None:intergenic 30.0%
TAATTGTACTCTTCAATGAC+AGG - chr4_1:69958118-69958137 None:intergenic 30.0%
! TCATTGAAGAGTACAATTAC+AGG + chr4_1:69958119-69958138 Msa0568340:intron 30.0%
! CATTGAAGAGTACAATTACA+GGG + chr4_1:69958120-69958139 Msa0568340:intron 30.0%
TTACAGGGTTTATTCAACAT+AGG + chr4_1:69958135-69958154 Msa0568340:intron 30.0%
CATAGGTTATGTACTAGAAA+TGG + chr4_1:69958152-69958171 Msa0568340:intron 30.0%
! GGAAACAGTTCATAGATTTT+TGG + chr4_1:69958173-69958192 Msa0568340:intron 30.0%
AATTTAATTGTGGAGAAGTG+TGG + chr4_1:69958565-69958584 Msa0568340:intron 30.0%
ATCATTCAATGGATGGTTAA+GGG - chr4_1:69958748-69958767 None:intergenic 30.0%
AATCATTCAATGGATGGTTA+AGG - chr4_1:69958749-69958768 None:intergenic 30.0%
CCCTAAACTTAATCATTCAA+TGG - chr4_1:69958759-69958778 None:intergenic 30.0%
!!! AGTTGGTATTTTTTTAGGGA+GGG - chr4_1:69958856-69958875 None:intergenic 30.0%
! TAACACTAAAAGGTGCATAT+CGG - chr4_1:69959507-69959526 None:intergenic 30.0%
!! ATTCCTACAAAAGTATTGGT+GGG - chr4_1:69959669-69959688 None:intergenic 30.0%
!! AATTCCTACAAAAGTATTGG+TGG - chr4_1:69959670-69959689 None:intergenic 30.0%
GAGGATGATGTCTTAATTTA+AGG - chr4_1:69959740-69959759 None:intergenic 30.0%
GCTAAAATTAAACGGCTATT+CGG + chr4_1:69959842-69959861 Msa0568340:intron 30.0%
TGATAGTTTAGAGACTATTC+TGG + chr4_1:69960159-69960178 Msa0568340:intron 30.0%
AGTCATGTCACAAGAAAAAA+TGG + chr4_1:69960255-69960274 Msa0568340:CDS 30.0%
AAAAATGGAATTTGACGATG+AGG + chr4_1:69960270-69960289 Msa0568340:CDS 30.0%
TCACTCATTTGTACATGAAA+GGG + chr4_1:69960452-69960471 Msa0568340:CDS 30.0%
ATCTAAGCTTCAACAAGAAT+TGG + chr4_1:69960477-69960496 Msa0568340:CDS 30.0%
GAATTGGAAGTTAAACAGTA+AGG + chr4_1:69960594-69960613 Msa0568340:CDS 30.0%
GAACAATTGAAATCTCATCT+TGG + chr4_1:69960757-69960776 Msa0568340:CDS 30.0%
AGATGAAGTTATGAAGAGAA+TGG + chr4_1:69961275-69961294 Msa0568340:CDS 30.0%
! TGAGCAAGTTTGACAAATTT+TGG + chr4_1:69961310-69961329 Msa0568340:CDS 30.0%
ATTACATTTCACAAGCGAAA+AGG - chr4_1:69961671-69961690 None:intergenic 30.0%
TTTCGCTTGTGAAATGTAAT+AGG + chr4_1:69961671-69961690 Msa0568340:intron 30.0%
CTTCAATAACAAGTTGTTGA+TGG - chr4_1:69961710-69961729 None:intergenic 30.0%
! TTTTCGTTGTTATGAAGACA+TGG + chr4_1:69961776-69961795 Msa0568340:CDS 30.0%
AAGACATGGATGTATTAGAA+TGG + chr4_1:69961790-69961809 Msa0568340:CDS 30.0%
ATTTCCAGATCTATCAATCT+TGG + chr4_1:69961833-69961852 Msa0568340:CDS 30.0%
! TTGTACAATTTTGTCAGCAA+TGG + chr4_1:69961993-69962012 Msa0568340:CDS 30.0%
TTAATAATTGAATAGACCCG+TGG - chr4_1:69962073-69962092 None:intergenic 30.0%
AGCAACGTCACAAGAAAATA+TGG + chr4_1:69950225-69950244 Msa0568340:intron 35.0%
ACAAAGGGAATCACAATTTG+CGG + chr4_1:69950267-69950286 Msa0568340:intron 35.0%
TCGAGCTCCAAAAAATGAAA+GGG - chr4_1:69950328-69950347 None:intergenic 35.0%
!!! TTTCATTTTTTGGAGCTCGA+GGG + chr4_1:69950328-69950347 Msa0568340:intron 35.0%
AAGCTTAAACAAGAATTGGC+TGG + chr4_1:69950451-69950470 Msa0568340:intron 35.0%
TAAAACTGATTGCTGAAGAG+GGG + chr4_1:69950812-69950831 Msa0568340:intron 35.0%
! TGAGGCATTCAAAGAATAGA+AGG + chr4_1:69950887-69950906 Msa0568340:intron 35.0%
! ATTTAAGGAGTGCATGGAAA+AGG + chr4_1:69950915-69950934 Msa0568340:intron 35.0%
ATGTTGGCAGTTTCACAAAA+AGG - chr4_1:69951135-69951154 None:intergenic 35.0%
GAAACTGCCAACATGATTAA+TGG + chr4_1:69951141-69951160 Msa0568340:intron 35.0%
TGAGCGAGTTTGAGAAATAT+TGG + chr4_1:69951280-69951299 Msa0568340:intron 35.0%
GAGCGAGTTTGAGAAATATT+GGG + chr4_1:69951281-69951300 Msa0568340:intron 35.0%
! TATAGTGTTGTTCTTGCACT+GGG + chr4_1:69951309-69951328 Msa0568340:intron 35.0%
GAGGTTAAACAAATTCAAGG+TGG - chr4_1:69951603-69951622 None:intergenic 35.0%
CAAGCCAATATTGATAGATC+CGG - chr4_1:69951803-69951822 None:intergenic 35.0%
TTCAAAATCAGAAGCAACAG+TGG - chr4_1:69951849-69951868 None:intergenic 35.0%
!! ATTCTAGTTTCCACATTCGT+CGG - chr4_1:69951920-69951939 None:intergenic 35.0%
AGAAGACAACAAAGATGACT+TGG + chr4_1:69952081-69952100 Msa0568340:intron 35.0%
TTTGAAGATGACAATGATGG+CGG + chr4_1:69952167-69952186 Msa0568340:intron 35.0%
!!! GCACCATATTTTTTTGTGAC+TGG + chr4_1:69952652-69952671 Msa0568340:intron 35.0%
! AAATTATGTTTTACTGCCGG+AGG - chr4_1:69952861-69952880 None:intergenic 35.0%
!! GTTGTATAATGGAGGTATTC+GGG - chr4_1:69953046-69953065 None:intergenic 35.0%
!! GGTTGTATAATGGAGGTATT+CGG - chr4_1:69953047-69953066 None:intergenic 35.0%
AATCATATTCAGAGCAACAG+AGG - chr4_1:69953073-69953092 None:intergenic 35.0%
TCCGGTTAGAAAAAGAAATG+TGG + chr4_1:69953242-69953261 Msa0568340:intron 35.0%
AGCGAAGCAAAAAAAATCGA+TGG + chr4_1:69953373-69953392 Msa0568340:intron 35.0%
TAACTAAGAAATGAGGTTCG+CGG - chr4_1:69954088-69954107 None:intergenic 35.0%
AATACCTGTTCGTGAAACAT+CGG - chr4_1:69954210-69954229 None:intergenic 35.0%
TTGGCGAGATAGATCAATTA+TGG + chr4_1:69954414-69954433 Msa0568340:intron 35.0%
CGAGATAGATCAATTATGGT+TGG + chr4_1:69954418-69954437 Msa0568340:intron 35.0%
ACTCAAGCTTAAACAGGAAT+TGG + chr4_1:69954601-69954620 Msa0568340:intron 35.0%
AATTGGCTACCATTCCTAAT+AGG + chr4_1:69954618-69954637 Msa0568340:intron 35.0%
!!! TGGTTGAGTTTTTGAGTGAT+TGG + chr4_1:69954792-69954811 Msa0568340:intron 35.0%
!!! GGTTGAGTTTTTGAGTGATT+GGG + chr4_1:69954793-69954812 Msa0568340:intron 35.0%
!!! GTTGAGTTTTTGAGTGATTG+GGG + chr4_1:69954794-69954813 Msa0568340:intron 35.0%
!! ACTCAACTTGGTTTGCAAAA+TGG + chr4_1:69954890-69954909 Msa0568340:intron 35.0%
!! CTCAACTTGGTTTGCAAAAT+GGG + chr4_1:69954891-69954910 Msa0568340:intron 35.0%
! ACAGAGCATCTTGTTTGTTA+GGG + chr4_1:69955021-69955040 Msa0568340:intron 35.0%
GAGTCGAAGGCAAAAATTTA+AGG + chr4_1:69955051-69955070 Msa0568340:intron 35.0%
! ATTTAAGGAGTGCGTTGAAA+AGG + chr4_1:69955066-69955085 Msa0568340:intron 35.0%
! TGCGTTCTTGTTTCCTTTAA+GGG + chr4_1:69955270-69955289 Msa0568340:intron 35.0%
ATGTTAGCAGTTTCCCTTAA+AGG - chr4_1:69955286-69955305 None:intergenic 35.0%
TGAGCAAGTTCGAGAAATAT+TGG + chr4_1:69955431-69955450 Msa0568340:intron 35.0%
GAGCAAGTTCGAGAAATATT+GGG + chr4_1:69955432-69955451 Msa0568340:intron 35.0%
! GTATAGTGTTGTTCTTGCAT+TGG + chr4_1:69955459-69955478 Msa0568340:intron 35.0%
ATGTAGAAAACTTCATCCGT+GGG - chr4_1:69955498-69955517 None:intergenic 35.0%
AATGTAGAAAACTTCATCCG+TGG - chr4_1:69955499-69955518 None:intergenic 35.0%
! ACGGATGAAGTTTTCTACAT+TGG + chr4_1:69955498-69955517 Msa0568340:intron 35.0%
!! TCTAGCAAAAGTACTTCTTC+TGG + chr4_1:69955610-69955629 Msa0568340:intron 35.0%
ATATGGATGTATTACAGTGG+TGG + chr4_1:69955908-69955927 Msa0568340:intron 35.0%
ATCAGAAGCGATAGTGTTAA+CGG - chr4_1:69955995-69956014 None:intergenic 35.0%
TAACACTATCGCTTCTGATA+TGG + chr4_1:69955996-69956015 Msa0568340:intron 35.0%
! TCTGATATGGATTTTTGCAC+GGG + chr4_1:69956009-69956028 Msa0568340:intron 35.0%
TCGTATGTTACCGATGAATT+TGG + chr4_1:69956059-69956078 Msa0568340:intron 35.0%
! TTGTACAATTTTGTTCGCGA+TGG + chr4_1:69956108-69956127 Msa0568340:intron 35.0%
TAAATGGAGCAAGCATCTAA+TGG + chr4_1:69956282-69956301 Msa0568340:intron 35.0%
AAATCAACCATCATCACCAT+CGG - chr4_1:69956329-69956348 None:intergenic 35.0%
!! GTTATGGTTTGTTGACTTAC+CGG + chr4_1:69956431-69956450 Msa0568340:intron 35.0%
!!! TATCTCTTGCATTTGGCTTT+TGG + chr4_1:69956642-69956661 Msa0568340:intron 35.0%
!!! ATCTCTTGCATTTGGCTTTT+GGG + chr4_1:69956643-69956662 Msa0568340:intron 35.0%
! CTAACTACATCTAGTGGTTT+TGG + chr4_1:69956833-69956852 Msa0568340:intron 35.0%
GTGAGGTAAATAGGATATCA+GGG - chr4_1:69956959-69956978 None:intergenic 35.0%
TGTGAGGTAAATAGGATATC+AGG - chr4_1:69956960-69956979 None:intergenic 35.0%
ATGATGCATGTGAGGTAAAT+AGG - chr4_1:69956968-69956987 None:intergenic 35.0%
!!! GATTTTGAAGTTGACGACAA+TGG + chr4_1:69957103-69957122 Msa0568340:intron 35.0%
! GTTATGGTTTGTGGACTTAT+TGG + chr4_1:69957218-69957237 Msa0568340:intron 35.0%
!! AATTTAGTGGTTTGGTTGTG+AGG + chr4_1:69957302-69957321 Msa0568340:intron 35.0%
AAATGAACACGCATACAAGA+AGG - chr4_1:69957377-69957396 None:intergenic 35.0%
TCCTTTCTAATGTTGGATGT+TGG + chr4_1:69957461-69957480 Msa0568340:intron 35.0%
TCCAACATCCAACATTAGAA+AGG - chr4_1:69957465-69957484 None:intergenic 35.0%
CTAATGTTGGATGTTGGATA+AGG + chr4_1:69957467-69957486 Msa0568340:intron 35.0%
! AATAATTTTGGGCCTCACAT+TGG + chr4_1:69957592-69957611 Msa0568340:intron 35.0%
! ATAATTTTGGGCCTCACATT+GGG + chr4_1:69957593-69957612 Msa0568340:intron 35.0%
TTAATTGTGTACCCAATGTG+AGG - chr4_1:69957607-69957626 None:intergenic 35.0%
AACGTTGAGCAACATATAAG+TGG - chr4_1:69957676-69957695 None:intergenic 35.0%
TGTGAGTAAAAGTTTCACGT+CGG - chr4_1:69957710-69957729 None:intergenic 35.0%
ACATGAAAAGGCAACAAGAA+TGG - chr4_1:69957818-69957837 None:intergenic 35.0%
TTAACTACTTCTAGTGGCTT+TGG + chr4_1:69958227-69958246 Msa0568340:intron 35.0%
CACGGAGAAAGTTAGAATTT+AGG - chr4_1:69958334-69958353 None:intergenic 35.0%
GCAAACATCCGAGAATAAAT+TGG + chr4_1:69958436-69958455 Msa0568340:intron 35.0%
TCATTATCTCTTGACCAACT+TGG + chr4_1:69958497-69958516 Msa0568340:intron 35.0%
! TTTTTGATCAAGTAGCCTAG+TGG + chr4_1:69958529-69958548 Msa0568340:intron 35.0%
GAACGCACACAATTTAATTG+TGG + chr4_1:69958555-69958574 Msa0568340:intron 35.0%
! TGCATTTTATATGCATGGGT+CGG - chr4_1:69958607-69958626 None:intergenic 35.0%
AAGGTGTGTTAAGACAAAGT+TGG - chr4_1:69958667-69958686 None:intergenic 35.0%
TCATTCAATGGATGGTTAAG+GGG - chr4_1:69958747-69958766 None:intergenic 35.0%
! TTATATGGGGTTTGATGGTT+TGG + chr4_1:69958781-69958800 Msa0568340:intron 35.0%
! TATATGGGGTTTGATGGTTT+GGG + chr4_1:69958782-69958801 Msa0568340:intron 35.0%
!!! GTTGGTATTTTTTTAGGGAG+GGG - chr4_1:69958855-69958874 None:intergenic 35.0%
!!! GAGTTGGTATTTTTTTAGGG+AGG - chr4_1:69958857-69958876 None:intergenic 35.0%
GAAATGTTAATGAATGCCTC+TGG + chr4_1:69958905-69958924 Msa0568340:intron 35.0%
!! ATTCGGTGTAATCAATGCAT+TGG + chr4_1:69958966-69958985 Msa0568340:intron 35.0%
ACTAGTCATAAAGTGGTTTG+AGG + chr4_1:69959087-69959106 Msa0568340:intron 35.0%
CTAGTCATAAAGTGGTTTGA+GGG + chr4_1:69959088-69959107 Msa0568340:intron 35.0%
!! TTCCTACAAAAGTATTGGTG+GGG - chr4_1:69959668-69959687 None:intergenic 35.0%
AGAAGAGAAAGTGACAAATG+AGG - chr4_1:69959947-69959966 None:intergenic 35.0%
CTGAAATGTAATCTAGGTTG+TGG + chr4_1:69960231-69960250 Msa0568340:intron 35.0%
TCGTGCTCCAAAAAATCAAA+GGG - chr4_1:69960358-69960377 None:intergenic 35.0%
!!! TTTGATTTTTTGGAGCACGA+GGG + chr4_1:69960358-69960377 Msa0568340:CDS 35.0%
TAAGCCTCAAGAACATTTGT+AGG - chr4_1:69960430-69960449 None:intergenic 35.0%
GTCACTCATTTGTACATGAA+AGG + chr4_1:69960451-69960470 Msa0568340:CDS 35.0%
AATTGGCTACCATTCCTAAT+AGG + chr4_1:69954618-69954637 Msa0568340:intron 35.0%
!! TCTCATCTTGGTTTGCAAAA+TGG + chr4_1:69960769-69960788 Msa0568340:CDS 35.0%
!! CTCATCTTGGTTTGCAAAAT+GGG + chr4_1:69960770-69960789 Msa0568340:CDS 35.0%
! GCTCTCTCTAATTTTAGACA+CGG - chr4_1:69960887-69960906 None:intergenic 35.0%
GAGTAGAAGGGAGAAATTTA+AGG + chr4_1:69960930-69960949 Msa0568340:CDS 35.0%
AAGGAATGCATTGAAAAGGT+TGG + chr4_1:69960949-69960968 Msa0568340:CDS 35.0%
TGAAAGTCTTCACTTGTATG+AGG + chr4_1:69955192-69955211 Msa0568340:intron 35.0%
ATGTTGGCAGTTTCACAAAA+AGG - chr4_1:69951135-69951154 None:intergenic 35.0%
! CGTTGTGTCATTAATCATGT+TGG - chr4_1:69961181-69961200 None:intergenic 35.0%
TTATGAAGAGAATGGCTGAA+AGG + chr4_1:69961283-69961302 Msa0568340:CDS 35.0%
! TACAGTGTTGTTCTTGCATT+GGG + chr4_1:69961339-69961358 Msa0568340:CDS 35.0%
AAAGGAAGTTGCAACTAGTA+AGG + chr4_1:69961436-69961455 Msa0568340:CDS 35.0%
ACGAAGTTGTACATGCTATT+TGG + chr4_1:69961459-69961478 Msa0568340:CDS 35.0%
AACTCCAAGTCTTTATCTCA+CGG + chr4_1:69961561-69961580 Msa0568340:CDS 35.0%
TAAACCGTGAGATAAAGACT+TGG - chr4_1:69961568-69961587 None:intergenic 35.0%
!! CAACAACTTGTTATTGAAGC+TGG + chr4_1:69961711-69961730 Msa0568340:CDS 35.0%
ACATGGATGTATTAGAATGG+TGG + chr4_1:69961793-69961812 Msa0568340:CDS 35.0%
!!! TTCTGATTTCGAGTTTTGCA+TGG + chr4_1:69961893-69961912 Msa0568340:CDS 35.0%
!!! TCTGATTTCGAGTTTTGCAT+GGG + chr4_1:69961894-69961913 Msa0568340:CDS 35.0%
!! ATTCTAGCTTCCACATTCAT+AGG - chr4_1:69961957-69961976 None:intergenic 35.0%
CAAAACAACACGATTAGACA+TGG - chr4_1:69962046-69962065 None:intergenic 35.0%
!!! TCGTGTTGTTTTGATAACCA+CGG + chr4_1:69962053-69962072 Msa0568340:intron 35.0%
AATTGACGGCGATGAAAAAA+TGG + chr4_1:69962158-69962177 Msa0568340:CDS 35.0%
TAAAACTATGTATGGCTGCT+TGG + chr4_1:69962295-69962314 Msa0568340:three_prime_UTR 35.0%
GTTATGGTTTATGCACTTAC+TGG + chr4_1:69962317-69962336 Msa0568340:three_prime_UTR 35.0%
AATACTTGTGCGTGAGACAT+CGG - chr4_1:69950106-69950125 None:intergenic 40.0%
CAAAGGGAATCACAATTTGC+GGG + chr4_1:69950268-69950287 Msa0568340:intron 40.0%
CTCGAGCTCCAAAAAATGAA+AGG - chr4_1:69950329-69950348 None:intergenic 40.0%
!!! CTTTCATTTTTTGGAGCTCG+AGG + chr4_1:69950327-69950346 Msa0568340:intron 40.0%
ACCTCCGACAAATGTTATTG+AGG + chr4_1:69950393-69950412 Msa0568340:intron 40.0%
AATTGGCTGGCATTCCTAAT+AGG + chr4_1:69950464-69950483 Msa0568340:intron 40.0%
! CTCATTTTGTTGACGCGAAT+TGG + chr4_1:69950548-69950567 Msa0568340:intron 40.0%
AAATCTCAGCTCCAATAGGA+GGG - chr4_1:69950612-69950631 None:intergenic 40.0%
TCAGAAATCTCAGCTCCAAT+AGG - chr4_1:69950616-69950635 None:intergenic 40.0%
!! CGAAATGGGTTGTTATGTGA+TGG + chr4_1:69950754-69950773 Msa0568340:intron 40.0%
!! GAGGGGTTAAAACTTGTTAG+TGG + chr4_1:69950829-69950848 Msa0568340:intron 40.0%
TCATAGACATGTCAAGATGC+AGG - chr4_1:69950966-69950985 None:intergenic 40.0%
TATGTCCTTTAGTAGCAGAG+TGG + chr4_1:69951076-69951095 Msa0568340:intron 40.0%
! CTTTTCCACTCTGCTACTAA+AGG - chr4_1:69951084-69951103 None:intergenic 40.0%
! CGTTGTGCCATTAATCATGT+TGG - chr4_1:69951151-69951170 None:intergenic 40.0%
! GTATAGTGTTGTTCTTGCAC+TGG + chr4_1:69951308-69951327 Msa0568340:intron 40.0%
!! TCTAGCAAAAGCACTTCTTC+TGG + chr4_1:69951459-69951478 Msa0568340:intron 40.0%
TGGCCTAAAAAGATCTCTTC+AGG + chr4_1:69951479-69951498 Msa0568340:intron 40.0%
! GGTCCTGAAGAGATCTTTTT+AGG - chr4_1:69951485-69951504 None:intergenic 40.0%
ACGTGAAAAGGAAAGCAATG+AGG - chr4_1:69951622-69951641 None:intergenic 40.0%
! AGGAATTGAAAGTGCACCAA+CGG + chr4_1:69951654-69951673 Msa0568340:intron 40.0%
! GACAACAAAGATGACTTGGA+TGG + chr4_1:69952085-69952104 Msa0568340:intron 40.0%
TGAAAAAACGCAACCACCAA+TGG - chr4_1:69952588-69952607 None:intergenic 40.0%
TAGCAGGGACAAGAAAGTTA+GGG - chr4_1:69952615-69952634 None:intergenic 40.0%
ATAGCAGGGACAAGAAAGTT+AGG - chr4_1:69952616-69952635 None:intergenic 40.0%
GTGAGATAGATAGGATAGCA+GGG - chr4_1:69952630-69952649 None:intergenic 40.0%
TGTGAGATAGATAGGATAGC+AGG - chr4_1:69952631-69952650 None:intergenic 40.0%
ATGGTGCATGTGAGATAGAT+AGG - chr4_1:69952639-69952658 None:intergenic 40.0%
GGAGGATGATTTCACATTAG+AGG - chr4_1:69952770-69952789 None:intergenic 40.0%
! ACAGAGGCATGGTTGTATAA+TGG - chr4_1:69953057-69953076 None:intergenic 40.0%
GTTCAGTCGGATTATGTACA+CGG + chr4_1:69953301-69953320 Msa0568340:intron 40.0%
CGTCTTAGTGTTGCGTTATT+TGG - chr4_1:69953543-69953562 None:intergenic 40.0%
AACTAAGAAATGAGGTTCGC+GGG - chr4_1:69954087-69954106 None:intergenic 40.0%
GGGTATGAGTAACTTCATGA+AGG + chr4_1:69954502-69954521 Msa0568340:intron 40.0%
! ATAGGAGGCATAACAGCATT+TGG - chr4_1:69954536-69954555 None:intergenic 40.0%
AGCGAAACTCAAGCTTAAAC+AGG + chr4_1:69954595-69954614 Msa0568340:intron 40.0%
AGATGAGATGTGTGAGAGAA+TGG + chr4_1:69954772-69954791 Msa0568340:intron 40.0%
! TGTAATGGGGAGTTCTTTCA+CGG + chr4_1:69954920-69954939 Msa0568340:intron 40.0%
! GACAGAGCATCTTGTTTGTT+AGG + chr4_1:69955020-69955039 Msa0568340:intron 40.0%
TTAGGGATTCAAAGAGTCGA+AGG + chr4_1:69955038-69955057 Msa0568340:intron 40.0%
TATGTCCTTCGGTAGAAGAA+TGG + chr4_1:69955227-69955246 Msa0568340:intron 40.0%
! CTTTTCCATTCTTCTACCGA+AGG - chr4_1:69955235-69955254 None:intergenic 40.0%
! GTGCGTTCTTGTTTCCTTTA+AGG + chr4_1:69955269-69955288 Msa0568340:intron 40.0%
TTGATGTTTCAGCCTGTGAA+AGG + chr4_1:69955539-69955558 Msa0568340:intron 40.0%
TTCTTGCAACTTCCTTTCAC+AGG - chr4_1:69955554-69955573 None:intergenic 40.0%
CGAGCCAATATTGAAAGATC+TGG - chr4_1:69955955-69955974 None:intergenic 40.0%
TCAGAAGCGATAGTGTTAAC+GGG - chr4_1:69955994-69956013 None:intergenic 40.0%
! CTAGATTTTGTACTCGCAGT+TGG + chr4_1:69956085-69956104 Msa0568340:intron 40.0%
!!! ATTTTGAAGTCAAACGCCGA+TGG + chr4_1:69956310-69956329 Msa0568340:intron 40.0%
AATGCAAGAGATAGAAGCTC+TGG - chr4_1:69956635-69956654 None:intergenic 40.0%
GAGCTTCTATCTCTTGCATT+TGG + chr4_1:69956635-69956654 Msa0568340:intron 40.0%
GGTTGTAGTTGTAACCCAAA+AGG + chr4_1:69956801-69956820 Msa0568340:intron 40.0%
GGTTGTTAGGTTATGGTTTG+TGG + chr4_1:69957209-69957228 Msa0568340:intron 40.0%
! ATGGTTTGTGGACTTATTGG+TGG + chr4_1:69957221-69957240 Msa0568340:intron 40.0%
GGAAAAAAATGTGGTGATCC+AGG - chr4_1:69957356-69957375 None:intergenic 40.0%
! TTCAAAATGTGTTGGCCACT+AGG + chr4_1:69957395-69957414 Msa0568340:intron 40.0%
!! TTATTTTGCTACTGGCCTAG+TGG - chr4_1:69957413-69957432 None:intergenic 40.0%
ATGATGCATGTGAGATAGCA+GGG - chr4_1:69958357-69958376 None:intergenic 40.0%
TATGATGCATGTGAGATAGC+AGG - chr4_1:69958358-69958377 None:intergenic 40.0%
! GCATTTTATATGCATGGGTC+GGG - chr4_1:69958606-69958625 None:intergenic 40.0%
GGGAATTATATGGGGTTTGA+TGG + chr4_1:69958776-69958795 Msa0568340:intron 40.0%
! ATATGGGGTTTGATGGTTTG+GGG + chr4_1:69958783-69958802 Msa0568340:intron 40.0%
! AACCCCACCAATACTTTTGT+AGG + chr4_1:69959663-69959682 Msa0568340:intron 40.0%
TACGATCCAAAACCCTAAAC+GGG - chr4_1:69959893-69959912 None:intergenic 40.0%
CTACGATCCAAAACCCTAAA+CGG - chr4_1:69959894-69959913 None:intergenic 40.0%
!!! TTTAGGGTTTTGGATCGTAG+AGG + chr4_1:69959894-69959913 Msa0568340:intron 40.0%
!!! TTAGGGTTTTGGATCGTAGA+GGG + chr4_1:69959895-69959914 Msa0568340:intron 40.0%
AAAGTGACAAATGAGGTACG+CGG - chr4_1:69959940-69959959 None:intergenic 40.0%
AATACCTGTGCATGAGACAT+CGG - chr4_1:69960011-69960030 None:intergenic 40.0%
TTTAGGGGACTAAAATGACG+AGG + chr4_1:69960133-69960152 Msa0568340:intron 40.0%
AGGTAGATCAAAGCGAATCA+CGG + chr4_1:69960290-69960309 Msa0568340:CDS 40.0%
CAAAGGGTAAATCAAGTGCA+AGG - chr4_1:69960342-69960361 None:intergenic 40.0%
CTCGTGCTCCAAAAAATCAA+AGG - chr4_1:69960359-69960378 None:intergenic 40.0%
!!! CTTTGATTTTTTGGAGCACG+AGG + chr4_1:69960357-69960376 Msa0568340:CDS 40.0%
! GTAGGAGGTATAACAGCATT+TGG - chr4_1:69960412-69960431 None:intergenic 40.0%
ACCTCCTACAAATGTTCTTG+AGG + chr4_1:69960423-69960442 Msa0568340:CDS 40.0%
TGAGCGGTCAAACAAATGTA+AGG - chr4_1:69960562-69960581 None:intergenic 40.0%
ATTCGCGTCAACAAAATGAG+CGG - chr4_1:69950548-69950567 None:intergenic 40.0%
! CTCATTTTGTTGACGCGAAT+TGG + chr4_1:69950548-69950567 Msa0568340:intron 40.0%
!! CAAAATGGGTTGTTGTGTGA+TGG + chr4_1:69960784-69960803 Msa0568340:CDS 40.0%
! TGTGATGGAGAGTTCTTTCA+CGG + chr4_1:69950769-69950788 Msa0568340:intron 40.0%
! TGAGGCATTCAAAGAGTAGA+AGG + chr4_1:69960917-69960936 Msa0568340:CDS 40.0%
! GAGGCATTCAAAGAGTAGAA+GGG + chr4_1:69960918-69960937 Msa0568340:CDS 40.0%
! ACGTGTTCTAGTTGATACTC+TGG + chr4_1:69961245-69961264 Msa0568340:CDS 40.0%
! CGTGTTCTAGTTGATACTCT+GGG + chr4_1:69961246-69961265 Msa0568340:CDS 40.0%
! GTACAGTGTTGTTCTTGCAT+TGG + chr4_1:69961338-69961357 Msa0568340:CDS 40.0%
TTGATGCATCAACCTGTGAA+AGG + chr4_1:69961418-69961437 Msa0568340:CDS 40.0%
TAGTTGCAACTTCCTTTCAC+AGG - chr4_1:69961433-69961452 None:intergenic 40.0%
! TCTAGCCAAAGTACTTCTTC+TGG + chr4_1:69961489-69961508 Msa0568340:CDS 40.0%
! TGGCATGCAAAGTACTATTC+AGG + chr4_1:69961509-69961528 Msa0568340:CDS 40.0%
! GGCATGCAAAGTACTATTCA+GGG + chr4_1:69961510-69961529 Msa0568340:CDS 40.0%
AAGCGAAAAGGAAAGCAATG+AGG - chr4_1:69961659-69961678 None:intergenic 40.0%
CAAGCCAAGATTGATAGATC+TGG - chr4_1:69961840-69961859 None:intergenic 40.0%
AAACTCGAAATCAGAAGCGA+CGG - chr4_1:69961889-69961908 None:intergenic 40.0%
CTAGAATTTGTACTCGCAGT+TGG + chr4_1:69961970-69961989 Msa0568340:CDS 40.0%
!!! CGTGTTGTTTTGATAACCAC+GGG + chr4_1:69962054-69962073 Msa0568340:intron 40.0%
!!! GATTTTGATGATGACTGCGA+TGG + chr4_1:69962201-69962220 Msa0568340:CDS 40.0%
TATGTATGGCTGCTTGGTTA+TGG + chr4_1:69962301-69962320 Msa0568340:three_prime_UTR 40.0%
ATGGTTTATGCACTTACTGG+TGG + chr4_1:69962320-69962339 Msa0568340:three_prime_UTR 40.0%
GAAAGGGCAAATCATGTGCA+AGG - chr4_1:69950312-69950331 None:intergenic 45.0%
! GTCGGAGGTATAACAGCATT+TGG - chr4_1:69950382-69950401 None:intergenic 45.0%
GCCTCAATAACATTTGTCGG+AGG - chr4_1:69950397-69950416 None:intergenic 45.0%
!! CGTCTTGTTTACCCTCCTAT+TGG + chr4_1:69950598-69950617 Msa0568340:intron 45.0%
GAAATCTCAGCTCCAATAGG+AGG - chr4_1:69950613-69950632 None:intergenic 45.0%
GCTGTCTCGAATTTCAGACA+CGG - chr4_1:69950857-69950876 None:intergenic 45.0%
GAGACAGCATCATGTTTGTG+AGG + chr4_1:69950869-69950888 Msa0568340:intron 45.0%
! AAGGAGTGCATGGAAAAGGT+TGG + chr4_1:69950919-69950938 Msa0568340:intron 45.0%
ACGTCGAAAACTTCATCCGT+GGG - chr4_1:69951347-69951366 None:intergenic 45.0%
AACGTCGAAAACTTCATCCG+TGG - chr4_1:69951348-69951367 None:intergenic 45.0%
! ACGGATGAAGTTTTCGACGT+TGG + chr4_1:69951347-69951366 Msa0568340:intron 45.0%
! AACTTCTGTTCGCAGGTTGA+TGG - chr4_1:69951396-69951415 None:intergenic 45.0%
TTGTTGCAACTTCTGTTCGC+AGG - chr4_1:69951403-69951422 None:intergenic 45.0%
GCAATGGCATGGTAGAAGAT+TGG - chr4_1:69951506-69951525 None:intergenic 45.0%
TCAGAAGCAACAGTGGCAAT+GGG - chr4_1:69951842-69951861 None:intergenic 45.0%
ATCAGAAGCAACAGTGGCAA+TGG - chr4_1:69951843-69951862 None:intergenic 45.0%
CTAGAATCTGTACTCGCAGT+TGG + chr4_1:69951933-69951952 Msa0568340:intron 45.0%
TGTGCTCTCCTGATAACAAG+TGG + chr4_1:69952016-69952035 Msa0568340:intron 45.0%
TGTTAGGATATGGTCTGGTC+TGG + chr4_1:69952259-69952278 Msa0568340:intron 45.0%
TGAGTAGCCAAAACCACTAG+TGG - chr4_1:69952517-69952536 None:intergenic 45.0%
CAATGGCAGCAAGTGAAACA+AGG - chr4_1:69952571-69952590 None:intergenic 45.0%
! CTTGTTTCACTTGCTGCCAT+TGG + chr4_1:69952569-69952588 Msa0568340:intron 45.0%
TGATACGTGCATACTTCCTC+CGG + chr4_1:69952842-69952861 Msa0568340:intron 45.0%
!! ATGGAGGTATTCGGGTATTC+TGG - chr4_1:69953038-69953057 None:intergenic 45.0%
GAGGCATGGTTGTATAATGG+AGG - chr4_1:69953054-69953073 None:intergenic 45.0%
TATTCAGAGCAACAGAGGCA+TGG - chr4_1:69953068-69953087 None:intergenic 45.0%
! CATGATTGATGCACGGGTTA+TGG + chr4_1:69953336-69953355 Msa0568340:intron 45.0%
AGATAACCCGTTTAACCCGA+CGG + chr4_1:69954026-69954045 Msa0568340:intron 45.0%
GCGTGAGTAAGTGACGAAAT+GGG - chr4_1:69954112-69954131 None:intergenic 45.0%
GTTGGAGAGAGAGTGACTAA+GGG - chr4_1:69954140-69954159 None:intergenic 45.0%
AGTTGGAGAGAGAGTGACTA+AGG - chr4_1:69954141-69954160 None:intergenic 45.0%
TCGCGCTCGAAGAAATCAAA+GGG - chr4_1:69954482-69954501 None:intergenic 45.0%
! TTTGATTTCTTCGAGCGCGA+GGG + chr4_1:69954482-69954501 Msa0568340:intron 45.0%
ATCCGCGTCAACAAAATGAG+CGG - chr4_1:69954702-69954721 None:intergenic 45.0%
! CTCATTTTGTTGACGCGGAT+TGG + chr4_1:69954702-69954721 Msa0568340:intron 45.0%
AGTGGGATCAACAGTACAGA+AGG - chr4_1:69954750-69954769 None:intergenic 45.0%
TTCTGTACTGTTGATCCCAC+TGG + chr4_1:69954749-69954768 Msa0568340:intron 45.0%
TCACACATCTCATCTCCAGT+GGG - chr4_1:69954767-69954786 None:intergenic 45.0%
! GTAATGGGGAGTTCTTTCAC+GGG + chr4_1:69954921-69954940 Msa0568340:intron 45.0%
! AAGGAGTGCGTTGAAAAGGT+TGG + chr4_1:69955070-69955089 Msa0568340:intron 45.0%
TAGTTCAGTTCGCTTGCATC+TGG + chr4_1:69955102-69955121 Msa0568340:intron 45.0%
TGTTGTTCTTGCATTGGGAG+CGG + chr4_1:69955465-69955484 Msa0568340:intron 45.0%
TGGCGTGCAAAGAACTATTC+AGG + chr4_1:69955630-69955649 Msa0568340:intron 45.0%
AAGTGAAAAGGACAGCAACG+AGG - chr4_1:69955780-69955799 None:intergenic 45.0%
TTCCAGTAACAAGCTGCTCA+TGG - chr4_1:69955831-69955850 None:intergenic 45.0%
!! ATGGTTTGTTGACTTACCGG+TGG + chr4_1:69956434-69956453 Msa0568340:intron 45.0%
!!! AGTGGTTTTGGCTTCTCTGA+AGG + chr4_1:69956845-69956864 Msa0568340:intron 45.0%
! TCTCTGAAGGTAAGAGCTTC+AGG + chr4_1:69956858-69956877 Msa0568340:intron 45.0%
CATCAGCAGCAAGTGAAACT+AGG - chr4_1:69956897-69956916 None:intergenic 45.0%
! CTAGTTTCACTTGCTGCTGA+TGG + chr4_1:69956895-69956914 Msa0568340:intron 45.0%
!! GACAGGAAGTATCGATGCTA+AGG - chr4_1:69956929-69956948 None:intergenic 45.0%
TGCAATCTCAGGTTCAAACC+TGG + chr4_1:69957335-69957354 Msa0568340:intron 45.0%
CTGATGTTGCCGTGTTTATG+TGG - chr4_1:69957923-69957942 None:intergenic 45.0%
CACATAAACACGGCAACATC+AGG + chr4_1:69957921-69957940 Msa0568340:intron 45.0%
! CTTGTTTCACTTGCTGCTGA+CGG + chr4_1:69958286-69958305 Msa0568340:intron 45.0%
AATGGATGGTTAAGGGGTTG+CGG - chr4_1:69958741-69958760 None:intergenic 45.0%
! ATGGTTTGGGGTGGAACAAA+TGG + chr4_1:69958795-69958814 Msa0568340:intron 45.0%
!! AGTGCTTAAAGAGTGTCCAG+AGG - chr4_1:69958924-69958943 None:intergenic 45.0%
!! GGAATGCTTAAAGAGTGTCC+CGG + chr4_1:69959032-69959051 Msa0568340:intron 45.0%
!! GAATGCTTAAAGAGTGTCCC+GGG + chr4_1:69959033-69959052 Msa0568340:intron 45.0%
!! AATGCTTAAAGAGTGTCCCG+GGG + chr4_1:69959034-69959053 Msa0568340:intron 45.0%
! TCTTTTTAACGAGTGTCCCC+GGG - chr4_1:69959053-69959072 None:intergenic 45.0%
! GTCTTTTTAACGAGTGTCCC+CGG - chr4_1:69959054-69959073 None:intergenic 45.0%
GTCATAAAGTGGTTTGAGGG+TGG + chr4_1:69959091-69959110 Msa0568340:intron 45.0%
! CACTAAAAGGTGCATATCGG+AGG - chr4_1:69959504-69959523 None:intergenic 45.0%
AAGTGACAAATGAGGTACGC+GGG - chr4_1:69959939-69959958 None:intergenic 45.0%
GGTAGATCAAAGCGAATCAC+GGG + chr4_1:69960291-69960310 Msa0568340:CDS 45.0%
GCCTCAAGAACATTTGTAGG+AGG - chr4_1:69960427-69960446 None:intergenic 45.0%
! GTGATGGAGAGTTCTTTCAC+GGG + chr4_1:69960800-69960819 Msa0568340:CDS 45.0%
!! GAGAGAGCATCATGTTTGTG+AGG + chr4_1:69960899-69960918 Msa0568340:CDS 45.0%
! TAGTTCTGTTCGCTTGCATC+AGG + chr4_1:69960981-69961000 Msa0568340:CDS 45.0%
TGTTGTTCTTGCATTGGGAG+CGG + chr4_1:69955465-69955484 Msa0568340:intron 45.0%
!! GCATGCCAGAAGAAGTACTT+TGG - chr4_1:69961497-69961516 None:intergenic 45.0%
! GACTTGGAGTTCTTTTGCAC+TGG - chr4_1:69961552-69961571 None:intergenic 45.0%
CCACATTCATAGGCAGCATA+AGG - chr4_1:69961947-69961966 None:intergenic 45.0%
CCTTATGCTGCCTATGAATG+TGG + chr4_1:69961944-69961963 Msa0568340:CDS 45.0%
!! TTTGATGATGACTGCGATGG+TGG + chr4_1:69962204-69962223 Msa0568340:CDS 45.0%
!! GATTATAAATTATAAATATA+AGG + chr4_1:69953183-69953202 Msa0568340:intron 5.0%
!!! TTTAAAATTATAACTATATA+TGG + chr4_1:69957188-69957207 Msa0568340:intron 5.0%
!! TAACATTTATTATATAAAAA+AGG + chr4_1:69958882-69958901 Msa0568340:intron 5.0%
!! AACATTTATTATATAAAAAA+GGG + chr4_1:69958883-69958902 Msa0568340:intron 5.0%
!! TAAAAAATAATTTCTAAATT+TGG + chr4_1:69959011-69959030 Msa0568340:intron 5.0%
GCGATGATATGACAGAGACG+CGG - chr4_1:69950075-69950094 None:intergenic 50.0%
!!! TTTTGGAGCTCGAGGGAATG+AGG + chr4_1:69950335-69950354 Msa0568340:intron 50.0%
GAGTGCATGGAAAAGGTTGG+TGG + chr4_1:69950922-69950941 Msa0568340:intron 50.0%
TTTCAGTAACCAGCTGCCGT+TGG - chr4_1:69951673-69951692 None:intergenic 50.0%
TAGGATATGGTCTGGTCTGG+TGG + chr4_1:69952262-69952281 Msa0568340:intron 50.0%
! GTTTCACTTGCTGCCATTGG+TGG + chr4_1:69952572-69952591 Msa0568340:intron 50.0%
!! TTCTGGACTTGCTGAAGGAG+TGG - chr4_1:69953021-69953040 None:intergenic 50.0%
!! GGGTATTCTGGACTTGCTGA+AGG - chr4_1:69953026-69953045 None:intergenic 50.0%
GATAACCCGTTTAACCCGAC+GGG + chr4_1:69954027-69954046 Msa0568340:intron 50.0%
GGCGTGAGTAAGTGACGAAA+TGG - chr4_1:69954113-69954132 None:intergenic 50.0%
! GAGAGAGTGACTAAGGGTGT+TGG - chr4_1:69954134-69954153 None:intergenic 50.0%
ACTCTCTCTCCAACTCCGTT+AGG + chr4_1:69954146-69954165 Msa0568340:intron 50.0%
CTCTCCGATGTTTCACGAAC+AGG + chr4_1:69954203-69954222 Msa0568340:intron 50.0%
CTCGCGCTCGAAGAAATCAA+AGG - chr4_1:69954483-69954502 None:intergenic 50.0%
! CTTTGATTTCTTCGAGCGCG+AGG + chr4_1:69954481-69954500 Msa0568340:intron 50.0%
! GACCGCTCATTTTGTTGACG+CGG + chr4_1:69954697-69954716 Msa0568340:intron 50.0%
CTCACACATCTCATCTCCAG+TGG - chr4_1:69954768-69954787 None:intergenic 50.0%
GAGTGCGTTGAAAAGGTTGG+TGG + chr4_1:69955073-69955092 Msa0568340:intron 50.0%
!! CACCATGAGCAGCTTGTTAC+TGG + chr4_1:69955826-69955845 Msa0568340:intron 50.0%
! TCAAACGCCGATGGTGATGA+TGG + chr4_1:69956319-69956338 Msa0568340:intron 50.0%
GATATCAGGGACAGAGAGAC+AGG - chr4_1:69956946-69956965 None:intergenic 50.0%
!! TCTAGTGGCTTTGGCTTCTC+TGG + chr4_1:69958236-69958255 Msa0568340:intron 50.0%
! GCTTTGGCTTCTCTGGTAGT+AGG + chr4_1:69958243-69958262 Msa0568340:intron 50.0%
GCTTCTCTGGTAGTAGGATC+AGG + chr4_1:69958249-69958268 Msa0568340:intron 50.0%
CGTCAGCAGCAAGTGAAACA+AGG - chr4_1:69958288-69958307 None:intergenic 50.0%
TTGTGTGCGTTCTAGCCACT+AGG - chr4_1:69958547-69958566 None:intergenic 50.0%
! TTGTGGAGAAGTGTGGTGTC+CGG + chr4_1:69958572-69958591 Msa0568340:intron 50.0%
TGAGCTTAGCTCAGCTGGTA+GGG - chr4_1:69958634-69958653 None:intergenic 50.0%
TACCAGCTGAGCTAAGCTCA+CGG + chr4_1:69958634-69958653 Msa0568340:intron 50.0%
! TCAAAGCGAATCACGGGTTG+TGG + chr4_1:69960297-69960316 Msa0568340:CDS 50.0%
!!! TTTTGGAGCACGAGGGAATG+AGG + chr4_1:69960365-69960384 Msa0568340:CDS 50.0%
TGTAGTGTTTACCCTGCCAC+TGG + chr4_1:69960628-69960647 Msa0568340:CDS 50.0%
TTCACACATCTCACCACCAG+TGG - chr4_1:69960647-69960666 None:intergenic 50.0%
TATGTCCTTCGGCAGAAGAG+TGG + chr4_1:69961106-69961125 Msa0568340:CDS 50.0%
! CTTTTCCACTCTTCTGCCGA+AGG - chr4_1:69961114-69961133 None:intergenic 50.0%
! GCACTGGCATGGTAGAAGAT+TGG - chr4_1:69961536-69961555 None:intergenic 50.0%
!! GGAGTTCTTTTGCACTGGCA+TGG - chr4_1:69961547-69961566 None:intergenic 50.0%
ACTTGTGCGTGAGACATCGG+AGG - chr4_1:69950103-69950122 None:intergenic 55.0%
TGGGAGCAGTTCTTGACCCA+CGG + chr4_1:69951328-69951347 Msa0568340:intron 55.0%
TCGTATGCTGCCGACGAATG+TGG + chr4_1:69951907-69951926 Msa0568340:intron 55.0%
ACCCTAAATTGCCCACCCGT+CGG - chr4_1:69954045-69954064 None:intergenic 55.0%
AACATCGGAGAGTCGCCGTA+AGG - chr4_1:69954195-69954214 None:intergenic 55.0%
! GTTTCACTTGCTGCTGACGG+TGG + chr4_1:69958289-69958308 Msa0568340:intron 55.0%
GCATGTGAGATAGCAGGGCA+CGG - chr4_1:69958352-69958371 None:intergenic 55.0%
! TGTGGAGAAGTGTGGTGTCC+GGG + chr4_1:69958573-69958592 Msa0568340:intron 55.0%
GTGAGCTTAGCTCAGCTGGT+AGG - chr4_1:69958635-69958654 None:intergenic 55.0%
ACCAGCTGAGCTAAGCTCAC+GGG + chr4_1:69958635-69958654 Msa0568340:intron 55.0%
! TGGGGTTTGATGGTTTGGGG+TGG + chr4_1:69958786-69958805 Msa0568340:intron 55.0%
AACCCTAAACGGGTACCCGT+CGG - chr4_1:69959883-69959902 None:intergenic 55.0%
!! CGGGTACCCGTTTAGGGTTT+TGG + chr4_1:69959884-69959903 Msa0568340:intron 55.0%
!!! GGGTTTTGGATCGTAGAGGG+AGG + chr4_1:69959898-69959917 Msa0568340:intron 55.0%
AGTGTTTACCCTGCCACTGG+TGG + chr4_1:69960631-69960650 Msa0568340:CDS 55.0%
ACATCTCACCACCAGTGGCA+GGG - chr4_1:69960642-69960661 None:intergenic 55.0%
TCAGAAGCGACGGTGGCAAT+GGG - chr4_1:69961879-69961898 None:intergenic 55.0%
ATCAGAAGCGACGGTGGCAA+TGG - chr4_1:69961880-69961899 None:intergenic 55.0%
CTCGAAATCAGAAGCGACGG+TGG - chr4_1:69961886-69961905 None:intergenic 55.0%
AGAGGCGATAGCGAGAGTCG+CGG - chr4_1:69950047-69950066 None:intergenic 60.0%
GCGTGAGACATCGGAGGAGA+CGG - chr4_1:69950097-69950116 None:intergenic 60.0%
! GAAAGTGCACCAACGGCAGC+TGG + chr4_1:69951661-69951680 Msa0568340:intron 60.0%
AACCCGTTTAACCCGACGGG+TGG + chr4_1:69954030-69954049 Msa0568340:intron 60.0%
ACCCGTTTAACCCGACGGGT+GGG + chr4_1:69954031-69954050 Msa0568340:intron 60.0%
TGCCCACCCGTCGGGTTAAA+CGG - chr4_1:69954036-69954055 None:intergenic 60.0%
ACCCGACGGGTGGGCAATTT+AGG + chr4_1:69954040-69954059 Msa0568340:intron 60.0%
CCCTAAATTGCCCACCCGTC+GGG - chr4_1:69954044-69954063 None:intergenic 60.0%
CCCGACGGGTGGGCAATTTA+GGG + chr4_1:69954041-69954060 Msa0568340:intron 60.0%
TGGCGGAGACCTAACGGAGT+TGG - chr4_1:69954158-69954177 None:intergenic 60.0%
! GCGACATGGCGGAGACCTAA+CGG - chr4_1:69954164-69954183 None:intergenic 60.0%
ATGTCGCCGCCGTCTCCTTA+CGG + chr4_1:69954177-69954196 Msa0568340:intron 60.0%
GGAGAGTCGCCGTAAGGAGA+CGG - chr4_1:69954189-69954208 None:intergenic 60.0%
TGGGAGCGGTTCTTGACCCA+CGG + chr4_1:69955479-69955498 Msa0568340:intron 60.0%
! GTGGAGAAGTGTGGTGTCCG+GGG + chr4_1:69958574-69958593 Msa0568340:intron 60.0%
CCAGCTGAGCTAAGCTCACG+GGG + chr4_1:69958636-69958655 Msa0568340:intron 60.0%
ACCCTAAACGGGTACCCGTC+GGG - chr4_1:69959882-69959901 None:intergenic 60.0%
TGGAGCACGAGGGAATGAGG+AGG + chr4_1:69960368-69960387 Msa0568340:CDS 60.0%
CACATCTCACCACCAGTGGC+AGG - chr4_1:69960643-69960662 None:intergenic 60.0%
GACAGAGACGCGGACGAGAG+AGG - chr4_1:69950065-69950084 None:intergenic 65.0%
GCCCACCCGTCGGGTTAAAC+GGG - chr4_1:69954035-69954054 None:intergenic 65.0%
GTAAGGAGACGGCGGCGACA+TGG - chr4_1:69954178-69954197 None:intergenic 65.0%
GAGTCGCCGTAAGGAGACGG+CGG - chr4_1:69954186-69954205 None:intergenic 65.0%
CATGGGTCGGGTTCGAACCC+CGG - chr4_1:69958594-69958613 None:intergenic 65.0%
CCCCGTGAGCTTAGCTCAGC+TGG - chr4_1:69958639-69958658 None:intergenic 65.0%
GCTAACCCGCTCAACCCCGA+CGG + chr4_1:69959864-69959883 Msa0568340:intron 65.0%
CTAACCCGCTCAACCCCGAC+GGG + chr4_1:69959865-69959884 Msa0568340:intron 65.0%
ACCCCGACGGGTACCCGTTT+AGG + chr4_1:69959877-69959896 Msa0568340:intron 65.0%
CCCTAAACGGGTACCCGTCG+GGG - chr4_1:69959881-69959900 None:intergenic 65.0%
CCCCGACGGGTACCCGTTTA+GGG + chr4_1:69959878-69959897 Msa0568340:intron 65.0%
CTCTCGCCGCCGTCTCCTTA+CGG + chr4_1:69959978-69959997 Msa0568340:five_prime_UTR 65.0%
AGGAGACGGCGGCGACATGG+CGG - chr4_1:69954175-69954194 None:intergenic 70.0%
GGTACCCGTCGGGGTTGAGC+GGG - chr4_1:69959872-69959891 None:intergenic 70.0%
GGGTACCCGTCGGGGTTGAG+CGG - chr4_1:69959873-69959892 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 69950006 69962425 69950006 ID=Msa0568340;Name=Msa0568340
chr4_1 mRNA 69950006 69962425 69950006 ID=Msa0568340-mRNA-1;Parent=Msa0568340;Name=Msa0568340-mRNA-1;_AED=0.35;_eAED=0.35;_QI=113|1|1|1|0.5|0.4|5|189|601
chr4_1 exon 69950006 69950027 69950006 ID=Msa0568340-mRNA-1:exon:23446;Parent=Msa0568340-mRNA-1
chr4_1 exon 69959920 69960025 69959920 ID=Msa0568340-mRNA-1:exon:23447;Parent=Msa0568340-mRNA-1
chr4_1 exon 69960247 69961593 69960247 ID=Msa0568340-mRNA-1:exon:23448;Parent=Msa0568340-mRNA-1
chr4_1 exon 69961693 69962014 69961693 ID=Msa0568340-mRNA-1:exon:23449;Parent=Msa0568340-mRNA-1
chr4_1 exon 69962115 69962425 69962115 ID=Msa0568340-mRNA-1:exon:23450;Parent=Msa0568340-mRNA-1
chr4_1 five_prime_UTR 69950006 69950027 69950006 ID=Msa0568340-mRNA-1:five_prime_utr;Parent=Msa0568340-mRNA-1
chr4_1 five_prime_UTR 69959920 69960010 69959920 ID=Msa0568340-mRNA-1:five_prime_utr;Parent=Msa0568340-mRNA-1
chr4_1 CDS 69960011 69960025 69960011 ID=Msa0568340-mRNA-1:cds;Parent=Msa0568340-mRNA-1
chr4_1 CDS 69960247 69961593 69960247 ID=Msa0568340-mRNA-1:cds;Parent=Msa0568340-mRNA-1
chr4_1 CDS 69961693 69962014 69961693 ID=Msa0568340-mRNA-1:cds;Parent=Msa0568340-mRNA-1
chr4_1 CDS 69962115 69962236 69962115 ID=Msa0568340-mRNA-1:cds;Parent=Msa0568340-mRNA-1
chr4_1 three_prime_UTR 69962237 69962425 69962237 ID=Msa0568340-mRNA-1:three_prime_utr;Parent=Msa0568340-mRNA-1
Gene Sequence

>Msa0568340

ATGTCTCATGCACAGGTTGTGGAAGTCATGTCACAAGAAAAAATGGAATTTGACGATGAGGTAGATCAAAGCGAATCACGGGTTGTGGATGCATGTGCTTCTATGATCCTTGCACTTGATTTACCCTTTGATTTTTTGGAGCACGAGGGAATGAGGAGGTACACTGAGACTTTAAATCCAAATGCTGTTATACCTCCTACAAATGTTCTTGAGGCTTATGTCACTCATTTGTACATGAAAGGGAAATCTAAGCTTCAACAAGAATTGGCTACCATTCCTAATAGGATATCTTTAACTTTTGATTTATGGGAATCTTGCACTACTATGCCTTACATTTGTTTGACCGCTCATTTTGTTGACGCGAATTGGAAGTTAAACAGTAAGGTTCTTAATTTCTGTAGTGTTTACCCTGCCACTGGTGGTGAGATGTGTGAAAGAATGATTGAATTGTTGAATGATTGGGGAATAGAGAAAAAGATTTTTTCTCTTACTTTAGATGATTCAGTCGAGAATAATGTTCTGCAAGAACAATTGAAATCTCATCTTGGTTTGCAAAATGGGTTGTTGTGTGATGGAGAGTTCTTTCACGGGCACTGTTTTGCACGTGTTTTAAATTTGATTATTGAAGAGGGGTTGAAATTAGTTAGTGATGCCGTGTCTAAAATTAGAGAGAGCATCATGTTTGTGAGGCATTCAAAGAGTAGAAGGGAGAAATTTAAGGAATGCATTGAAAAGGTTGGTGCTGTTGATAGTTCTGTTCGCTTGCATCAGGACTCGTCTATGAGTCTGAACTCAACTTATTTGATGCTTGAAAGTGCTCTTAAATATCGGCGTGTGTTTGAAAGTCTTCACTTGTATGAGGATAATTATGAGTTATGTCCTTCGGCAGAAGAGTGGAAAAGAGTAGAAAAGATTTGTGCATTCTTGTTGCCTTTTTGTGAAACTGCCAACATGATTAATGACACAACGCATCCTACTTCCAATTTGTATTTTTTGCAAGTTTGGAAAGTCGAACGTGTTCTAGTTGATACTCTGGGAGATGAAGATGAAGTTATGAAGAGAATGGCTGAAAGGATGATGAGCAAGTTTGACAAATTTTGGAATGAGTACAGTGTTGTTCTTGCATTGGGAGCGGTTCTTGACCCACGTATTAAATTTTCAACATTGGCTTATTGTTACTCAAAACTTGATGCATCAACCTGTGAAAGGAAGTTGCAACTAGTAAGGACGAAGTTGTACATGCTATTTGGCAAGTATTCTAGCCAAAGTACTTCTTCTGGCATGCAAAGTACTATTCAGGGCCAATCTTCTACCATGCCAGTGCAAAAGAACTCCAAGTCTTTATCTCACGGTTTATTCGATGAATTGAAAATGCACCATCAACAACTTGTTATTGAAGCTGGAAAATCTCAACTTGATGTTTACTTAGATGAATCAAGTTTGGATTTTCGTTGTTATGAAGACATGGATGTATTAGAATGGTGGAAGAGTAATAATAATCGATTTCCAGATCTATCAATCTTGGCTTGTGACTTGTTAAGTGTTCCCATTGCCACCGTCGCTTCTGATTTCGAGTTTTGCATGGGCGCACGCGTCTTTGAAAAGTATAAAGACCTTATGCTGCCTATGAATGTGGAAGCTAGAATTTGTACTCGCAGTTGGTTGTACAATTTTGTCAGCAATGATGAAGAGGACGATGATGATGACTTTGAAGAAATTATGAATGAAATTGACGGCGATGAAAAAATGGAGAAAGCATCAAATGATTTTGATTTTGATGATGACTGCGATGGTGGTGATGATTGA

Protein sequence

>Msa0568340

MSHAQVVEVMSQEKMEFDDEVDQSESRVVDACASMILALDLPFDFLEHEGMRRYTETLNPNAVIPPTNVLEAYVTHLYMKGKSKLQQELATIPNRISLTFDLWESCTTMPYICLTAHFVDANWKLNSKVLNFCSVYPATGGEMCERMIELLNDWGIEKKIFSLTLDDSVENNVLQEQLKSHLGLQNGLLCDGEFFHGHCFARVLNLIIEEGLKLVSDAVSKIRESIMFVRHSKSRREKFKECIEKVGAVDSSVRLHQDSSMSLNSTYLMLESALKYRRVFESLHLYEDNYELCPSAEEWKRVEKICAFLLPFCETANMINDTTHPTSNLYFLQVWKVERVLVDTLGDEDEVMKRMAERMMSKFDKFWNEYSVVLALGAVLDPRIKFSTLAYCYSKLDASTCERKLQLVRTKLYMLFGKYSSQSTSSGMQSTIQGQSSTMPVQKNSKSLSHGLFDELKMHHQQLVIEAGKSQLDVYLDESSLDFRCYEDMDVLEWWKSNNNRFPDLSILACDLLSVPIATVASDFEFCMGARVFEKYKDLMLPMNVEARICTRSWLYNFVSNDEEDDDDDFEEIMNEIDGDEKMEKASNDFDFDDDCDGGDD*