Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0569300 | XP_003630359.2 | 97.584 | 538 | 12 | 1 | 1 | 537 | 1 | 538 | 0.0 | 1071 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0569300 | sp|Q8GXR9|NDC1_ARATH | 69.639 | 527 | 149 | 3 | 6 | 532 | 4 | 519 | 0.0 | 729 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0569300 | G7LFP1 | 97.584 | 538 | 12 | 1 | 1 | 537 | 1 | 538 | 0.0 | 1071 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0569300 | Msa0674220 | 0.809680 | 1.678590e-50 | -8.615850e-47 |
| Msa0569300 | Msa1397540 | 0.807574 | 4.729313e-50 | -8.615850e-47 |
| Msa0569300 | Msa1456810 | 0.807191 | 5.703502e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0569300 | MtrunA17_Chr8g0384841 | 97.584 | 538 | 12 | 1 | 1 | 537 | 1 | 538 | 0.0 | 1071 |
| Msa0569300 | MtrunA17_Chr4g0048041 | 24.301 | 465 | 279 | 16 | 83 | 511 | 105 | 532 | 1.63e-14 | 76.3 |
| Msa0569300 | MtrunA17_Chr5g0430321 | 25.107 | 466 | 276 | 16 | 82 | 511 | 62 | 490 | 7.36e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0569300 | AT5G08740.1 | 69.260 | 527 | 151 | 3 | 6 | 532 | 4 | 519 | 0.0 | 724 |
| Msa0569300 | AT2G29990.1 | 25.000 | 476 | 266 | 20 | 81 | 511 | 68 | 497 | 5.39e-15 | 78.2 |
Find 166 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAAACTTAAATTGAATAAT+TGG | 0.183138 | 4_1:+71174401 | None:intergenic |
| GAAATTCGTGTGCGCCTTTA+CGG | 0.195349 | 4_1:+71178961 | None:intergenic |
| AGCTTATCCAAGGTCCTTTC+AGG | 0.234732 | 4_1:-71174590 | Msa0569300:CDS |
| GTGGTTTATATACTGCTTTA+AGG | 0.255228 | 4_1:-71178780 | Msa0569300:CDS |
| CAACAATAGCCACACTAATT+TGG | 0.273192 | 4_1:+71176870 | None:intergenic |
| TTTGCAGCCCTCTGATCATT+TGG | 0.274066 | 4_1:-71177571 | Msa0569300:CDS |
| CCTAAGTTGAGAGTCGTTAT+TGG | 0.275981 | 4_1:+71174281 | None:intergenic |
| AAATGTTATGGCCTTGTTCT+TGG | 0.286791 | 4_1:-71174489 | Msa0569300:three_prime_UTR |
| TCCTCGCTTCTCGGATTTGC+TGG | 0.287439 | 4_1:-71177634 | Msa0569300:CDS |
| CAATAAAAGTTCAACCTTCC+TGG | 0.296221 | 4_1:+71175636 | None:intergenic |
| ATCAAATATCTGGTAATATA+TGG | 0.296673 | 4_1:-71174311 | Msa0569300:three_prime_UTR |
| TCTATTAGAGTTAGCGAATA+AGG | 0.304458 | 4_1:+71179057 | None:intergenic |
| TTGGCGACTCTTCGGCATTA+AGG | 0.308386 | 4_1:-71175330 | Msa0569300:CDS |
| AAGAGATGGAGAATGAAGTT+AGG | 0.314222 | 4_1:+71179305 | None:intergenic |
| ATATTAGCATTTAAATGTTA+TGG | 0.316802 | 4_1:-71174501 | Msa0569300:three_prime_UTR |
| TATATGCAACAATACCTAAA+TGG | 0.323836 | 4_1:+71175097 | None:intergenic |
| TGATTCAAAACCTTGTTATC+AGG | 0.323928 | 4_1:+71178932 | None:intergenic |
| ATTGTTGGTTGTGGTTACTC+TGG | 0.332921 | 4_1:-71176854 | Msa0569300:CDS |
| AAGCCTAGAGTGTGTATATT+AGG | 0.338679 | 4_1:-71178814 | Msa0569300:CDS |
| GCCAGGCTGGTTCTTGCATT+GGG | 0.348821 | 4_1:-71177120 | Msa0569300:intron |
| TTGCAGCCCTCTGATCATTT+GGG | 0.355108 | 4_1:-71177570 | Msa0569300:CDS |
| CTCTGCTTTCCTCTTTCAGC+AGG | 0.361548 | 4_1:+71175517 | None:intergenic |
| AGATGAAACTCTTCGTGTTA+AGG | 0.362886 | 4_1:-71175374 | Msa0569300:CDS |
| CAAACCTCCTCTTCCTCATC+TGG | 0.371516 | 4_1:-71175452 | Msa0569300:CDS |
| GATGAAACTCTTCGTGTTAA+GGG | 0.372399 | 4_1:-71175373 | Msa0569300:CDS |
| CGTGTGCGCCTTTACGGTTT+CGG | 0.372437 | 4_1:+71178967 | None:intergenic |
| ATCTGTTTCCGCCTGTCCCC+TGG | 0.375897 | 4_1:+71175393 | None:intergenic |
| TGTATATTAGGTGGTGGATT+TGG | 0.380492 | 4_1:-71178802 | Msa0569300:CDS |
| AATCTCTGGGCTGCAATCAA+TGG | 0.389937 | 4_1:-71175133 | Msa0569300:CDS |
| TGGCGACTCTTCGGCATTAA+GGG | 0.395361 | 4_1:-71175329 | Msa0569300:CDS |
| GAAGGCCCTGTTGGCCATGC+TGG | 0.395735 | 4_1:-71174820 | Msa0569300:intron |
| TTGGATAGCAACTGTTGAAT+CGG | 0.396701 | 4_1:-71179444 | Msa0569300:five_prime_UTR |
| TGGAGAATGAAGTTAGGGTT+TGG | 0.396790 | 4_1:+71179311 | None:intergenic |
| TTGTTGGTTGTGGTTACTCT+GGG | 0.401241 | 4_1:-71176853 | Msa0569300:CDS |
| CAGATGAGGAAGAGGAGGTT+TGG | 0.401952 | 4_1:+71175453 | None:intergenic |
| ATTGGGAGCTGAAGCTAAAC+TGG | 0.403751 | 4_1:-71177103 | Msa0569300:CDS |
| CTATTGCCAGGTGGGGCAGT+TGG | 0.404467 | 4_1:+71176749 | None:intergenic |
| AGAGATGGAGAATGAAGTTA+GGG | 0.404506 | 4_1:+71179306 | None:intergenic |
| AACATACCAGCATGGCCAAC+AGG | 0.406929 | 4_1:+71174814 | None:intergenic |
| TATTGCCAGGTGGGGCAGTT+GGG | 0.408582 | 4_1:+71176750 | None:intergenic |
| GCACGCTGTTCCCGAGCAAT+TGG | 0.413096 | 4_1:-71179102 | Msa0569300:CDS |
| CGCTGCTTCTCCAATTGCTC+GGG | 0.414145 | 4_1:+71179092 | None:intergenic |
| AATGATGAAGCAAACTCTAT+TGG | 0.414367 | 4_1:+71179386 | None:intergenic |
| ATCTCTGGGCTGCAATCAAT+GGG | 0.414491 | 4_1:-71175132 | Msa0569300:CDS |
| ATAGAAAACGTTTACAGTTA+CGG | 0.415801 | 4_1:-71179039 | Msa0569300:CDS |
| GTTGACGGGTTAACTTTAGA+AGG | 0.421479 | 4_1:-71174838 | Msa0569300:CDS |
| CCTAGGTGAGATGATGACTT+TGG | 0.422823 | 4_1:-71174893 | Msa0569300:CDS |
| TTTATATACTGCTTTAAGGT+TGG | 0.428283 | 4_1:-71178776 | Msa0569300:CDS |
| GACTTAAAGTGGGGATCAGC+TGG | 0.431359 | 4_1:-71174655 | Msa0569300:CDS |
| CCGCTGCTTCTCCAATTGCT+CGG | 0.434039 | 4_1:+71179091 | None:intergenic |
| AGCCAGGCTGGTTCTTGCAT+TGG | 0.434279 | 4_1:-71177121 | Msa0569300:intron |
| GAGTCTTCAAATACTCCAAA+AGG | 0.435858 | 4_1:-71175574 | Msa0569300:CDS |
| GGAAATAGCTCCTCGCTTCT+CGG | 0.435859 | 4_1:-71177643 | Msa0569300:CDS |
| CAAATTAGTGTGGCTATTGT+TGG | 0.436374 | 4_1:-71176869 | Msa0569300:CDS |
| TAAAATCATTGAAGCAGATC+TGG | 0.437055 | 4_1:-71175494 | Msa0569300:CDS |
| AGTGCGGCTTCTCTATTGCC+AGG | 0.442945 | 4_1:+71176737 | None:intergenic |
| GTTAAGCTGTCTATTGACTA+AGG | 0.453072 | 4_1:+71174229 | None:intergenic |
| TTGTTATTCCACTTAATGCC+AGG | 0.455065 | 4_1:-71175411 | Msa0569300:CDS |
| ATATTAGGTGGTGGATTTGG+TGG | 0.456796 | 4_1:-71178799 | Msa0569300:CDS |
| ATGTTGTACGAGCTTCTATC+TGG | 0.458304 | 4_1:-71177763 | Msa0569300:CDS |
| TCCACTTAATGCCAGGGGAC+AGG | 0.458352 | 4_1:-71175404 | Msa0569300:CDS |
| CTAGGTGAGATGATGACTTT+GGG | 0.458561 | 4_1:-71174892 | Msa0569300:CDS |
| TTGAGAACATGTTGTATCAC+TGG | 0.460327 | 4_1:-71174344 | Msa0569300:three_prime_UTR |
| GGCATACAGAAGTGGATGAA+TGG | 0.460524 | 4_1:-71177665 | Msa0569300:intron |
| TCTGATCATTTGGGTGTGAA+TGG | 0.464118 | 4_1:-71177561 | Msa0569300:CDS |
| AGATTAATGTATATATAGAA+TGG | 0.470422 | 4_1:-71174552 | Msa0569300:exon |
| AGTTGAGAGTCGTTATTGGC+AGG | 0.470606 | 4_1:+71174285 | None:intergenic |
| CGGCTTCTCTATTGCCAGGT+GGG | 0.474921 | 4_1:+71176741 | None:intergenic |
| TTAAGTCTATGTTCATCTGT+TGG | 0.475750 | 4_1:+71174671 | None:intergenic |
| AAATTGAATAATTGGTGCAC+TGG | 0.476684 | 4_1:+71174409 | None:intergenic |
| GCATACAGAAGTGGATGAAT+GGG | 0.477197 | 4_1:-71177664 | Msa0569300:intron |
| CACAAATGACTGTGCAAGAT+GGG | 0.479236 | 4_1:-71174463 | Msa0569300:three_prime_UTR |
| TCGGCATTAAGGGATTCAAA+TGG | 0.483378 | 4_1:-71175319 | Msa0569300:CDS |
| ATCTGCCCAACTGCCCCACC+TGG | 0.484822 | 4_1:-71176755 | Msa0569300:CDS |
| AATCACACCTGTGCAGTGGC+TGG | 0.485252 | 4_1:+71175286 | None:intergenic |
| TGGATAGCAACTGTTGAATC+GGG | 0.485318 | 4_1:-71179443 | Msa0569300:five_prime_UTR |
| ATTTGAAGACTCGGATTCAC+TGG | 0.486384 | 4_1:+71175585 | None:intergenic |
| GCAGAGCGATTACAAAATAG+AGG | 0.492310 | 4_1:-71176809 | Msa0569300:CDS |
| GCATTAAGTGGAATAACAAA+TGG | 0.503930 | 4_1:+71175415 | None:intergenic |
| AGATGAACATAGACTTAAAG+TGG | 0.505486 | 4_1:-71174666 | Msa0569300:CDS |
| ACCAGTCGTATTCGATATGA+AGG | 0.509210 | 4_1:+71177493 | None:intergenic |
| GATGTTAGGTTCTTTCATCC+AGG | 0.510559 | 4_1:-71175654 | Msa0569300:intron |
| GAATATTCCAGATGAGGAAG+AGG | 0.512920 | 4_1:+71175445 | None:intergenic |
| ATTGCGAATTCTGTTGCTCC+TGG | 0.520933 | 4_1:+71177072 | None:intergenic |
| GCCTGTCCCCTGGCATTAAG+TGG | 0.521000 | 4_1:+71175403 | None:intergenic |
| AACGAGATGTGGAGCCTGAA+AGG | 0.521656 | 4_1:+71174576 | None:intergenic |
| TCGGATTTGCTGGCCAACAC+TGG | 0.522334 | 4_1:-71177624 | Msa0569300:CDS |
| AGTAATGGAGAAATGAACAT+TGG | 0.522601 | 4_1:+71179350 | None:intergenic |
| GCTAAACTGGATGTTGTACC+AGG | 0.531036 | 4_1:-71177090 | Msa0569300:CDS |
| AGTGTGGCTATTGTTGGTTG+TGG | 0.531139 | 4_1:-71176863 | Msa0569300:CDS |
| GACTAAGGACGACGCAGATA+AGG | 0.534988 | 4_1:+71174244 | None:intergenic |
| GAATGAATCCGAAACCGTAA+AGG | 0.537051 | 4_1:-71178975 | Msa0569300:CDS |
| TTTCATGTGGCCTGATAACA+AGG | 0.540934 | 4_1:-71178942 | Msa0569300:intron |
| CCAATAACGACTCTCAACTT+AGG | 0.546108 | 4_1:-71174281 | Msa0569300:three_prime_UTR |
| GCAACTGTTGAATCGGGAAG+TGG | 0.546242 | 4_1:-71179437 | Msa0569300:five_prime_UTR |
| AGAGAGAAAGACCTTTGGTA+AGG | 0.548355 | 4_1:-71176897 | Msa0569300:CDS |
| TCACAAATGACTGTGCAAGA+TGG | 0.550167 | 4_1:-71174464 | Msa0569300:three_prime_UTR |
| GGAAGATAGCTTATTTGATG+AGG | 0.553016 | 4_1:-71174697 | Msa0569300:CDS |
| ATATTAGAGAGAAAGACCTT+TGG | 0.555077 | 4_1:-71176902 | Msa0569300:CDS |
| GTTGAGAGTCGTTATTGGCA+GGG | 0.556593 | 4_1:+71174286 | None:intergenic |
| GAGCTACAACCTGCTGAAAG+AGG | 0.558931 | 4_1:-71175526 | Msa0569300:CDS |
| AGCGACGAGGGAGGGTGATG+CGG | 0.561412 | 4_1:+71179256 | None:intergenic |
| TGTGGAGCCTGAAAGGACCT+TGG | 0.563985 | 4_1:+71174583 | None:intergenic |
| ACACCTGTGCAGTGGCTGGA+AGG | 0.565625 | 4_1:+71175290 | None:intergenic |
| GGAACTGTTCATCTTGAAAG+TGG | 0.567235 | 4_1:-71177516 | Msa0569300:CDS |
| ACATTAATCTGAACGAGATG+TGG | 0.567900 | 4_1:+71174565 | None:intergenic |
| CGGTGAAAAGCGACGAGGGA+GGG | 0.568243 | 4_1:+71179248 | None:intergenic |
| GATCCTTCCAGCCACTGCAC+AGG | 0.568939 | 4_1:-71175293 | Msa0569300:intron |
| AATTCCTTTCTCAACTCTAG+AGG | 0.569459 | 4_1:-71177052 | Msa0569300:CDS |
| AGTCTTCAAATACTCCAAAA+GGG | 0.569486 | 4_1:-71175573 | Msa0569300:CDS |
| TTGAAGCAGATCTGGTATTG+TGG | 0.569859 | 4_1:-71175486 | Msa0569300:CDS |
| GATCTGGTATTGTGGACTGT+TGG | 0.571094 | 4_1:-71175478 | Msa0569300:CDS |
| CCACCTAATATACACACTCT+AGG | 0.574182 | 4_1:+71178811 | None:intergenic |
| TCCTCCACGAGTAGATGTGT+TGG | 0.575478 | 4_1:+71177536 | None:intergenic |
| TTAGAGTTAGCGAATAAGGA+TGG | 0.575525 | 4_1:+71179061 | None:intergenic |
| GGCTTCTCTATTGCCAGGTG+GGG | 0.583582 | 4_1:+71176742 | None:intergenic |
| TGTTATTCCACTTAATGCCA+GGG | 0.583658 | 4_1:-71175410 | Msa0569300:CDS |
| TATTAGGTGGAGCGAAACAA+TGG | 0.584420 | 4_1:-71179126 | Msa0569300:intron |
| AGAGTGTGTATATTAGGTGG+TGG | 0.586393 | 4_1:-71178808 | Msa0569300:CDS |
| GTGACATTGTGAAGAAGAGA+TGG | 0.588775 | 4_1:+71179291 | None:intergenic |
| CATTTGTGATGCCAAGAACA+AGG | 0.589681 | 4_1:+71174478 | None:intergenic |
| TTAGGTTCTTTCATCCAGGA+AGG | 0.591528 | 4_1:-71175650 | Msa0569300:intron |
| TTAACTTTAGAAGGCCCTGT+TGG | 0.591640 | 4_1:-71174829 | Msa0569300:CDS |
| CCTAGAGTGTGTATATTAGG+TGG | 0.592356 | 4_1:-71178811 | Msa0569300:CDS |
| AAAATTGATGGCCATAGATG+AGG | 0.593584 | 4_1:+71174377 | None:intergenic |
| TATTCCAGATGAGGAAGAGG+AGG | 0.595878 | 4_1:+71175448 | None:intergenic |
| CAATACCTAAATGGCAAAAG+CGG | 0.596219 | 4_1:+71175106 | None:intergenic |
| TCGGGAAGTGGCAGAAAGCG+TGG | 0.598398 | 4_1:-71179425 | Msa0569300:five_prime_UTR |
| TTCACACCCAAATGATCAGA+GGG | 0.598834 | 4_1:+71177564 | None:intergenic |
| GATGAACATAGACTTAAAGT+GGG | 0.599056 | 4_1:-71174665 | Msa0569300:CDS |
| GCGGCTTCTCTATTGCCAGG+TGG | 0.599643 | 4_1:+71176740 | None:intergenic |
| GCCTTCATATCGAATACGAC+TGG | 0.600408 | 4_1:-71177494 | Msa0569300:intron |
| GCATCCTCTAGAGTTGAGAA+AGG | 0.602807 | 4_1:+71177048 | None:intergenic |
| GATAGAAGCTCGTACAACAT+TGG | 0.604375 | 4_1:+71177766 | None:intergenic |
| GATTGCTCTTGTCGATCAGT+CGG | 0.605749 | 4_1:-71177806 | Msa0569300:CDS |
| CCAAAGTCATCATCTCACCT+AGG | 0.612336 | 4_1:+71174893 | None:intergenic |
| TTGTACGAGCTTCTATCTGG+TGG | 0.622384 | 4_1:-71177760 | Msa0569300:intron |
| ACATCTGAATATTCCAGATG+AGG | 0.622457 | 4_1:+71175439 | None:intergenic |
| GTTAACCCGTCAACAAAACT+CGG | 0.627560 | 4_1:+71174847 | None:intergenic |
| GTTATTCCACTTAATGCCAG+GGG | 0.629610 | 4_1:-71175409 | Msa0569300:CDS |
| GCTACAGAGTAGCTTATCCA+AGG | 0.633038 | 4_1:-71174600 | Msa0569300:CDS |
| AATTTGGTAGTCCTTACCAA+AGG | 0.634405 | 4_1:+71176886 | None:intergenic |
| ATAAAATCACACCTGTGCAG+TGG | 0.635822 | 4_1:+71175282 | None:intergenic |
| CCGAGCAATTGGAGAAGCAG+CGG | 0.635860 | 4_1:-71179091 | Msa0569300:CDS |
| TGAAGCAAACTCTATTGGTA+TGG | 0.637554 | 4_1:+71179391 | None:intergenic |
| CGCCAAGAGAAAATATCCGT+GGG | 0.637875 | 4_1:+71175347 | None:intergenic |
| ACTTAATGCCAGGGGACAGG+CGG | 0.639559 | 4_1:-71175401 | Msa0569300:CDS |
| GGATCCAACACATCTACTCG+TGG | 0.643947 | 4_1:-71177540 | Msa0569300:CDS |
| ACATACCAGCATGGCCAACA+GGG | 0.645026 | 4_1:+71174815 | None:intergenic |
| TCGCCAAGAGAAAATATCCG+TGG | 0.650910 | 4_1:+71175346 | None:intergenic |
| ATTCACACCCAAATGATCAG+AGG | 0.651472 | 4_1:+71177563 | None:intergenic |
| CATTAAGGGATTCAAATGGA+AGG | 0.654908 | 4_1:-71175315 | Msa0569300:CDS |
| GCCAGCAAATCCGAGAAGCG+AGG | 0.660195 | 4_1:+71177633 | None:intergenic |
| TAAGGTTGGAATCACTCGAG+TGG | 0.660438 | 4_1:-71178762 | Msa0569300:CDS |
| TTCGTGTTAAGGGTCACCCA+CGG | 0.665539 | 4_1:-71175363 | Msa0569300:CDS |
| GGTGCTAGGTTTCAAAACCT+AGG | 0.665662 | 4_1:-71174910 | Msa0569300:intron |
| CGTACGGTGAAAAGCGACGA+GGG | 0.670353 | 4_1:+71179244 | None:intergenic |
| TCCAACACATCTACTCGTGG+AGG | 0.674401 | 4_1:-71177537 | Msa0569300:CDS |
| TAAACAACTTACTTTCAGTG+CGG | 0.677262 | 4_1:+71176721 | None:intergenic |
| AGGCGCACACGAATTTCATG+TGG | 0.692757 | 4_1:-71178955 | Msa0569300:CDS |
| TGTTGGTTGTGGTTACTCTG+GGG | 0.696184 | 4_1:-71176852 | Msa0569300:CDS |
| TAAGGACTACCAAATTAGTG+TGG | 0.709566 | 4_1:-71176879 | Msa0569300:CDS |
| GCGTACGGTGAAAAGCGACG+AGG | 0.714060 | 4_1:+71179243 | None:intergenic |
| GTAAGACCAACATACCAGCA+TGG | 0.714519 | 4_1:+71174806 | None:intergenic |
| ACGGTGAAAAGCGACGAGGG+AGG | 0.717450 | 4_1:+71179247 | None:intergenic |
| ATGAACATAGACTTAAAGTG+GGG | 0.729556 | 4_1:-71174664 | Msa0569300:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAATTTTTATAAAAATAT+AGG | + | chr4_1:71177436-71177455 | None:intergenic | 0.0% |
| !!! | TATTTTTATAAAAATTTAAA+CGG | - | chr4_1:71177437-71177456 | Msa0569300:intron | 0.0% |
| !!! | CTTTATTTTATCTTTTATTA+TGG | - | chr4_1:71175588-71175607 | Msa0569300:CDS | 10.0% |
| !! | AATATAAATTTCAAATTACA+AGG | + | chr4_1:71177465-71177484 | None:intergenic | 10.0% |
| !!! | GTAATTTGAAATTTATATTT+AGG | - | chr4_1:71177466-71177485 | Msa0569300:intron | 10.0% |
| !!! | AGTTTTGATTTTTTTTAATA+TGG | - | chr4_1:71177496-71177515 | Msa0569300:CDS | 10.0% |
| !! | AATATGAATTATTATGTATA+AGG | + | chr4_1:71177706-71177725 | None:intergenic | 10.0% |
| !! | AAAATTTCTTACAATAATAT+TGG | + | chr4_1:71177974-71177993 | None:intergenic | 10.0% |
| !!! | TCTTATTAATGTTTTTAATA+GGG | + | chr4_1:71178923-71178942 | None:intergenic | 10.0% |
| !!! | TTCTTATTAATGTTTTTAAT+AGG | + | chr4_1:71178924-71178943 | None:intergenic | 10.0% |
| !! | TAAAACTTAAATTGAATAAT+TGG | + | chr4_1:71179280-71179299 | None:intergenic | 10.0% |
| !!! | ACAATTTTTTTTCATCTATT+AGG | - | chr4_1:71174536-71174555 | Msa0569300:three_prime_UTR | 15.0% |
| !!! | TATTGAATATGTAAAGATTT+TGG | - | chr4_1:71174792-71174811 | Msa0569300:intron | 15.0% |
| !! | TATAAATTTAATCTCAATCA+TGG | - | chr4_1:71175166-71175185 | Msa0569300:CDS | 15.0% |
| !! | ATAAATTTAATCTCAATCAT+GGG | - | chr4_1:71175167-71175186 | Msa0569300:CDS | 15.0% |
| !! | AATTTAAATTTAATGCTTTC+TGG | - | chr4_1:71176981-71177000 | Msa0569300:intron | 15.0% |
| !!! | AAAGTTTTTTTTTAGTGAAA+CGG | + | chr4_1:71177101-71177120 | None:intergenic | 15.0% |
| !! | ATTTACGGATATAAATTTAA+TGG | + | chr4_1:71177944-71177963 | None:intergenic | 15.0% |
| !!! | AATATTGGTAATGAAATTTA+CGG | + | chr4_1:71177959-71177978 | None:intergenic | 15.0% |
| !!! | TGATTTTGAAAAGTATATAT+TGG | - | chr4_1:71178130-71178149 | Msa0569300:intron | 15.0% |
| !!! | AGTTTTTATTTGCTAATATA+AGG | - | chr4_1:71178606-71178625 | Msa0569300:intron | 15.0% |
| !!! | GTTTTTATTTGCTAATATAA+GGG | - | chr4_1:71178607-71178626 | Msa0569300:intron | 15.0% |
| !! | AGATTAATGTATATATAGAA+TGG | - | chr4_1:71179126-71179145 | Msa0569300:intron | 15.0% |
| !! | ATATTAGCATTTAAATGTTA+TGG | - | chr4_1:71179177-71179196 | Msa0569300:intron | 15.0% |
| !! | AAAACTATCATAAAAATTGA+TGG | + | chr4_1:71179316-71179335 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTCATCTATTAGG+TGG | - | chr4_1:71174539-71174558 | Msa0569300:three_prime_UTR | 20.0% |
| !!! | AATAAGTTAAAAACAGCTTT+TGG | + | chr4_1:71175507-71175526 | None:intergenic | 20.0% |
| !!! | TTATCTTTTATTATGGAAGT+AGG | - | chr4_1:71175595-71175614 | Msa0569300:CDS | 20.0% |
| !!! | ATAGAATTCCTTATTTGATA+TGG | - | chr4_1:71175845-71175864 | Msa0569300:intron | 20.0% |
| !! | TATAAAACATAATTGATGTC+AGG | + | chr4_1:71176245-71176264 | None:intergenic | 20.0% |
| !! | ATTGTAATGATTAGAGTTTA+TGG | - | chr4_1:71176369-71176388 | Msa0569300:intron | 20.0% |
| !! | TTGTAATGATTAGAGTTTAT+GGG | - | chr4_1:71176370-71176389 | Msa0569300:intron | 20.0% |
| !! | TTTACCAGTAAAAAATAGTT+GGG | + | chr4_1:71176462-71176481 | None:intergenic | 20.0% |
| !! | ATTTACCAGTAAAAAATAGT+TGG | + | chr4_1:71176463-71176482 | None:intergenic | 20.0% |
| !! | GATCAATTATTTAATATCTC+AGG | - | chr4_1:71176676-71176695 | Msa0569300:intron | 20.0% |
| !!! | AAATGTGATTATTTGTTGTT+TGG | - | chr4_1:71177262-71177281 | Msa0569300:intron | 20.0% |
| !!! | AATGTGATTATTTGTTGTTT+GGG | - | chr4_1:71177263-71177282 | Msa0569300:intron | 20.0% |
| !! | TTGTCTTGACATATATAATT+GGG | + | chr4_1:71177318-71177337 | None:intergenic | 20.0% |
| !! | TTAAAAACATTAAACAAGAC+CGG | + | chr4_1:71177559-71177578 | None:intergenic | 20.0% |
| !! | ACCTACTCATAAAAATTATT+TGG | - | chr4_1:71177644-71177663 | Msa0569300:CDS | 20.0% |
| !!! | TCCAAATAATTTTTATGAGT+AGG | + | chr4_1:71177648-71177667 | None:intergenic | 20.0% |
| !!! | GAAATTTTATGATATCTGAA+AGG | - | chr4_1:71177986-71178005 | Msa0569300:intron | 20.0% |
| !! | AACACTATTTATTCTTAATC+TGG | - | chr4_1:71178746-71178765 | Msa0569300:CDS | 20.0% |
| !! | ACACTATTTATTCTTAATCT+GGG | - | chr4_1:71178747-71178766 | Msa0569300:CDS | 20.0% |
| !! | ATCAAATATCTGGTAATATA+TGG | - | chr4_1:71179367-71179386 | Msa0569300:five_prime_UTR | 20.0% |
| ! | ATAGAAAACGTTTACAGTTA+CGG | - | chr4_1:71174639-71174658 | Msa0569300:CDS | 25.0% |
| !!! | TTTATATACTGCTTTAAGGT+TGG | - | chr4_1:71174902-71174921 | Msa0569300:CDS | 25.0% |
| !!! | ATTCAGTTTTTTCTAGCTTA+TGG | - | chr4_1:71174985-71175004 | Msa0569300:intron | 25.0% |
| ! | TAATAAGGAACATTCATCAA+TGG | - | chr4_1:71175071-71175090 | Msa0569300:intron | 25.0% |
| ! | AATCATTTCCATGATGTTAA+AGG | + | chr4_1:71175133-71175152 | None:intergenic | 25.0% |
| ! | ACAACACTAATTATAGTCAT+AGG | - | chr4_1:71175358-71175377 | Msa0569300:CDS | 25.0% |
| !! | GACTTATTTGAGATTATCTA+CGG | - | chr4_1:71175425-71175444 | Msa0569300:CDS | 25.0% |
| ! | AAACTGTTTGAGAGAATATA+TGG | - | chr4_1:71175463-71175482 | Msa0569300:CDS | 25.0% |
| !!! | CTTATTTTTATAAGTTCTCC+AGG | - | chr4_1:71175521-71175540 | Msa0569300:CDS | 25.0% |
| ! | TGATAAACACCTATGTTATT+AGG | - | chr4_1:71175637-71175656 | Msa0569300:CDS | 25.0% |
| ! | TTGCAAAAGAACAAAATACA+TGG | + | chr4_1:71175714-71175733 | None:intergenic | 25.0% |
| ! | AATCTGTTCCATATCAAATA+AGG | + | chr4_1:71175856-71175875 | None:intergenic | 25.0% |
| ! | GATTAAGCAGATTTACATTA+TGG | - | chr4_1:71175992-71176011 | Msa0569300:intron | 25.0% |
| !! | TAAGATGATATGTTTTTCTC+TGG | - | chr4_1:71176272-71176291 | Msa0569300:intron | 25.0% |
| ! | TAAGAATAAACTTAAGAGTG+TGG | + | chr4_1:71176350-71176369 | None:intergenic | 25.0% |
| !! | GTATCTAAAATATCCACTAA+AGG | - | chr4_1:71176428-71176447 | Msa0569300:intron | 25.0% |
| !!! | TTTTTTACTGGTAAATGAAG+TGG | - | chr4_1:71176467-71176486 | Msa0569300:intron | 25.0% |
| !!! | TTTTTATTGATTTCACATGC+CGG | - | chr4_1:71176719-71176738 | Msa0569300:intron | 25.0% |
| !! | CATCTTCAAACATAAAGTTT+TGG | + | chr4_1:71177177-71177196 | None:intergenic | 25.0% |
| ! | CTTGTCTTGACATATATAAT+TGG | + | chr4_1:71177319-71177338 | None:intergenic | 25.0% |
| !! | AGGACTATAAATGTTTTCTT+AGG | + | chr4_1:71177368-71177387 | None:intergenic | 25.0% |
| ! | AATTATCAAGTCTTTCTAAG+AGG | + | chr4_1:71177388-71177407 | None:intergenic | 25.0% |
| ! | CAGTTACAAAATTAAACTGT+AGG | - | chr4_1:71177590-71177609 | Msa0569300:CDS | 25.0% |
| ! | GGCTAATGCTTATATAATTT+AGG | + | chr4_1:71177771-71177790 | None:intergenic | 25.0% |
| !! | TTATCCCTTTTCTTAAACTA+CGG | - | chr4_1:71177899-71177918 | Msa0569300:intron | 25.0% |
| !!! | GTTATTTTGTCAACTGTATT+CGG | - | chr4_1:71178066-71178085 | Msa0569300:intron | 25.0% |
| ! | GTATCTAATCTTATAGTACT+AGG | - | chr4_1:71178426-71178445 | Msa0569300:intron | 25.0% |
| ! | TATATGCAACAATACCTAAA+TGG | + | chr4_1:71178584-71178603 | None:intergenic | 25.0% |
| !!! | GTTTCTAGCATAATAAAGAA+TGG | + | chr4_1:71178901-71178920 | None:intergenic | 25.0% |
| AATGATGAAGCAAACTCTAT+TGG | + | chr4_1:71174295-71174314 | None:intergenic | 30.0% | |
| ! | AGTAATGGAGAAATGAACAT+TGG | + | chr4_1:71174331-71174350 | None:intergenic | 30.0% |
| ! | TTTTATCGACGAAGTAGTAA+TGG | + | chr4_1:71174346-71174365 | None:intergenic | 30.0% |
| TCTATTAGAGTTAGCGAATA+AGG | + | chr4_1:71174624-71174643 | None:intergenic | 30.0% | |
| ! | TGATTCAAAACCTTGTTATC+AGG | + | chr4_1:71174749-71174768 | None:intergenic | 30.0% |
| GTGGTTTATATACTGCTTTA+AGG | - | chr4_1:71174898-71174917 | Msa0569300:CDS | 30.0% | |
| AATGTTAAAACACTTACCTG+CGG | + | chr4_1:71174957-71174976 | None:intergenic | 30.0% | |
| ACATTCATCAATGGATGAAA+AGG | - | chr4_1:71175080-71175099 | Msa0569300:intron | 30.0% | |
| CATTCATCAATGGATGAAAA+GGG | - | chr4_1:71175081-71175100 | Msa0569300:intron | 30.0% | |
| AAATAGCAGATATAGTGTAG+CGG | - | chr4_1:71175200-71175219 | Msa0569300:intron | 30.0% | |
| AGTGTATCACAAAACAATAG+CGG | + | chr4_1:71175238-71175257 | None:intergenic | 30.0% | |
| TTAAAATTCTGCTACGCAAT+GGG | + | chr4_1:71175308-71175327 | None:intergenic | 30.0% | |
| GTATGGTTTAGAGATCTATT+TGG | - | chr4_1:71175399-71175418 | Msa0569300:CDS | 30.0% | |
| ! | TTGAGTTGTTTATCCAAAGA+CGG | - | chr4_1:71175663-71175682 | Msa0569300:intron | 30.0% |
| ATTGATCTAGGTGTGAAAAA+TGG | - | chr4_1:71176310-71176329 | Msa0569300:intron | 30.0% | |
| TTGATCTAGGTGTGAAAAAT+GGG | - | chr4_1:71176311-71176330 | Msa0569300:intron | 30.0% | |
| !!! | TGAACCCAACTATTTTTTAC+TGG | - | chr4_1:71176455-71176474 | Msa0569300:intron | 30.0% |
| ATATTAGAGAGAAAGACCTT+TGG | - | chr4_1:71176776-71176795 | Msa0569300:CDS | 30.0% | |
| TAAACAACTTACTTTCAGTG+CGG | + | chr4_1:71176960-71176979 | None:intergenic | 30.0% | |
| !! | AACTTGAGCACTTAGTTTTT+AGG | + | chr4_1:71177240-71177259 | None:intergenic | 30.0% |
| GTGTTTAGGAAAATTCAACT+AGG | + | chr4_1:71177617-71177636 | None:intergenic | 30.0% | |
| AGTAGGTTAAAGTAGTGTTT+AGG | + | chr4_1:71177631-71177650 | None:intergenic | 30.0% | |
| GTGATGGTTAAAATAGCATT+CGG | + | chr4_1:71177837-71177856 | None:intergenic | 30.0% | |
| ! | AGGAAGGTTGAACTTTTATT+GGG | - | chr4_1:71178044-71178063 | Msa0569300:intron | 30.0% |
| !!! | TTTTGGAGTATTTGAAGACT+CGG | + | chr4_1:71178105-71178124 | None:intergenic | 30.0% |
| AGTCTTCAAATACTCCAAAA+GGG | - | chr4_1:71178105-71178124 | Msa0569300:intron | 30.0% | |
| ! | TTTTCAAAATCAAGCCCTTT+TGG | + | chr4_1:71178122-71178141 | None:intergenic | 30.0% |
| TAAAATCATTGAAGCAGATC+TGG | - | chr4_1:71178184-71178203 | Msa0569300:intron | 30.0% | |
| GCATTAAGTGGAATAACAAA+TGG | + | chr4_1:71178266-71178285 | None:intergenic | 30.0% | |
| CAGTTGTCAAATAAAGATGA+TGG | + | chr4_1:71178474-71178493 | None:intergenic | 30.0% | |
| ! | ACTGTTTTCCTTTACTTTGT+AGG | - | chr4_1:71178490-71178509 | Msa0569300:intron | 30.0% |
| AAATGCAACCTACAAAGTAA+AGG | + | chr4_1:71178501-71178520 | None:intergenic | 30.0% | |
| ! | TTTCAACAAGCAGATTTTAC+TGG | - | chr4_1:71178518-71178537 | Msa0569300:intron | 30.0% |
| TTAAGTCTATGTTCATCTGT+TGG | + | chr4_1:71179010-71179029 | None:intergenic | 30.0% | |
| AGATGAACATAGACTTAAAG+TGG | - | chr4_1:71179012-71179031 | Msa0569300:CDS | 30.0% | |
| GATGAACATAGACTTAAAGT+GGG | - | chr4_1:71179013-71179032 | Msa0569300:CDS | 30.0% | |
| ATGAACATAGACTTAAAGTG+GGG | - | chr4_1:71179014-71179033 | Msa0569300:CDS | 30.0% | |
| AAATTGAATAATTGGTGCAC+TGG | + | chr4_1:71179272-71179291 | None:intergenic | 30.0% | |
| !! | TTAAGTTTTAGCCTCATCTA+TGG | - | chr4_1:71179290-71179309 | Msa0569300:exon | 30.0% |
| !!! | CTTTTCTAGGATCAAATATC+TGG | - | chr4_1:71179357-71179376 | Msa0569300:five_prime_UTR | 30.0% |
| TGAAGCAAACTCTATTGGTA+TGG | + | chr4_1:71174290-71174309 | None:intergenic | 35.0% | |
| AGAGATGGAGAATGAAGTTA+GGG | + | chr4_1:71174375-71174394 | None:intergenic | 35.0% | |
| AAGAGATGGAGAATGAAGTT+AGG | + | chr4_1:71174376-71174395 | None:intergenic | 35.0% | |
| ! | ATTGTGAATCTGATAGTGTG+TGG | + | chr4_1:71174521-71174540 | None:intergenic | 35.0% |
| TTAGAGTTAGCGAATAAGGA+TGG | + | chr4_1:71174620-71174639 | None:intergenic | 35.0% | |
| AAGCCTAGAGTGTGTATATT+AGG | - | chr4_1:71174864-71174883 | Msa0569300:CDS | 35.0% | |
| !! | TGTATATTAGGTGGTGGATT+TGG | - | chr4_1:71174876-71174895 | Msa0569300:CDS | 35.0% |
| ATCCATGATAGGTGTAACTT+AGG | - | chr4_1:71175021-71175040 | Msa0569300:intron | 35.0% | |
| GATGACATGGTGTGTTAATA+AGG | - | chr4_1:71175056-71175075 | Msa0569300:intron | 35.0% | |
| CATTAGTGCCTTTAACATCA+TGG | - | chr4_1:71175122-71175141 | Msa0569300:CDS | 35.0% | |
| !! | TACGAAGTGTTGTCAAATAG+CGG | - | chr4_1:71175264-71175283 | Msa0569300:intron | 35.0% |
| GTTAAAATTCTGCTACGCAA+TGG | + | chr4_1:71175309-71175328 | None:intergenic | 35.0% | |
| AGTCATAGGTCATAATTGCA+CGG | - | chr4_1:71175372-71175391 | Msa0569300:CDS | 35.0% | |
| !! | GTTGTTTTCATAAGCTATCC+TGG | + | chr4_1:71175542-71175561 | None:intergenic | 35.0% |
| ACTCAAGCACCTAATAACAT+AGG | + | chr4_1:71175649-71175668 | None:intergenic | 35.0% | |
| TACATGGAAGCTTATCATGT+GGG | + | chr4_1:71175698-71175717 | None:intergenic | 35.0% | |
| ATACATGGAAGCTTATCATG+TGG | + | chr4_1:71175699-71175718 | None:intergenic | 35.0% | |
| TAAGTCACATCACAGTGAAT+GGG | + | chr4_1:71175774-71175793 | None:intergenic | 35.0% | |
| TTAAGTCACATCACAGTGAA+TGG | + | chr4_1:71175775-71175794 | None:intergenic | 35.0% | |
| !! | TTTCTGCACTTTTTGCTTCT+CGG | - | chr4_1:71175805-71175824 | Msa0569300:intron | 35.0% |
| TACATTATGGCATACAGAAG+TGG | - | chr4_1:71176005-71176024 | Msa0569300:intron | 35.0% | |
| ! | TGATATGTTTTTCTCTGGCT+TGG | - | chr4_1:71176277-71176296 | Msa0569300:intron | 35.0% |
| ! | TTGGGTTCATTTTCCTTTAG+TGG | + | chr4_1:71176444-71176463 | None:intergenic | 35.0% |
| AATTCCTTTCTCAACTCTAG+AGG | - | chr4_1:71176626-71176645 | Msa0569300:intron | 35.0% | |
| ! | AATTTGGTAGTCCTTACCAA+AGG | + | chr4_1:71176795-71176814 | None:intergenic | 35.0% |
| TAAGGACTACCAAATTAGTG+TGG | - | chr4_1:71176799-71176818 | Msa0569300:CDS | 35.0% | |
| CAACAATAGCCACACTAATT+TGG | + | chr4_1:71176811-71176830 | None:intergenic | 35.0% | |
| CAAATTAGTGTGGCTATTGT+TGG | - | chr4_1:71176809-71176828 | Msa0569300:CDS | 35.0% | |
| ! | ATATCTATTTTGTACAGCCC+TGG | - | chr4_1:71177011-71177030 | Msa0569300:intron | 35.0% |
| GAGTGAAGTCAGATATTTAG+AGG | - | chr4_1:71177151-71177170 | Msa0569300:intron | 35.0% | |
| GGCATCATTAATCTTAAGCA+AGG | + | chr4_1:71177347-71177366 | None:intergenic | 35.0% | |
| GCCATATTGTTTAGCACTAT+GGG | - | chr4_1:71177530-71177549 | Msa0569300:CDS | 35.0% | |
| CCATATTGTTTAGCACTATG+GGG | - | chr4_1:71177531-71177550 | Msa0569300:CDS | 35.0% | |
| ACTGATGTAGCATTCAATCA+TGG | + | chr4_1:71177792-71177811 | None:intergenic | 35.0% | |
| GGTATTTCAATTTCATCCTG+GGG | + | chr4_1:71177816-71177835 | None:intergenic | 35.0% | |
| CGGTATTTCAATTTCATCCT+GGG | + | chr4_1:71177817-71177836 | None:intergenic | 35.0% | |
| TCGGTATTTCAATTTCATCC+TGG | + | chr4_1:71177818-71177837 | None:intergenic | 35.0% | |
| TTAACCATCACTTGTAATCC+TGG | - | chr4_1:71177846-71177865 | Msa0569300:intron | 35.0% | |
| AAAACCAGGATTACAAGTGA+TGG | + | chr4_1:71177853-71177872 | None:intergenic | 35.0% | |
| ! | GAAGCTTTAACAACAAAACC+AGG | + | chr4_1:71177867-71177886 | None:intergenic | 35.0% |
| TGAAAGGAAACATTATGCTG+TGG | - | chr4_1:71178002-71178021 | Msa0569300:intron | 35.0% | |
| AACATTATGCTGTGGATGTT+AGG | - | chr4_1:71178010-71178029 | Msa0569300:intron | 35.0% | |
| CAATAAAAGTTCAACCTTCC+TGG | + | chr4_1:71178045-71178064 | None:intergenic | 35.0% | |
| ! | CAGGAAGGTTGAACTTTTAT+TGG | - | chr4_1:71178043-71178062 | Msa0569300:intron | 35.0% |
| ! | TTTTGTCAACTGTATTCGGA+AGG | - | chr4_1:71178070-71178089 | Msa0569300:intron | 35.0% |
| GAGTCTTCAAATACTCCAAA+AGG | - | chr4_1:71178104-71178123 | Msa0569300:intron | 35.0% | |
| ACATCTGAATATTCCAGATG+AGG | + | chr4_1:71178242-71178261 | None:intergenic | 35.0% | |
| ! | TTGTTATTCCACTTAATGCC+AGG | - | chr4_1:71178267-71178286 | Msa0569300:intron | 35.0% |
| TGTTATTCCACTTAATGCCA+GGG | - | chr4_1:71178268-71178287 | Msa0569300:intron | 35.0% | |
| AGATGAAACTCTTCGTGTTA+AGG | - | chr4_1:71178304-71178323 | Msa0569300:intron | 35.0% | |
| GATGAAACTCTTCGTGTTAA+GGG | - | chr4_1:71178305-71178324 | Msa0569300:intron | 35.0% | |
| CATTAAGGGATTCAAATGGA+AGG | - | chr4_1:71178363-71178382 | Msa0569300:intron | 35.0% | |
| ! | AACAAGCAGATTTTACTGGT+TGG | - | chr4_1:71178522-71178541 | Msa0569300:intron | 35.0% |
| !! | ATTTTACTGGTTGGAATCTC+TGG | - | chr4_1:71178531-71178550 | Msa0569300:intron | 35.0% |
| !! | TTTTACTGGTTGGAATCTCT+GGG | - | chr4_1:71178532-71178551 | Msa0569300:intron | 35.0% |
| CAATACCTAAATGGCAAAAG+CGG | + | chr4_1:71178575-71178594 | None:intergenic | 35.0% | |
| ATAAGGGAAAAAAGCCAATC+TGG | - | chr4_1:71178623-71178642 | Msa0569300:intron | 35.0% | |
| TTATTCTTAATCTGGGTGCT+AGG | - | chr4_1:71178754-71178773 | Msa0569300:CDS | 35.0% | |
| !!! | ATTTCTCCGAGTTTTGTTGA+CGG | - | chr4_1:71178825-71178844 | Msa0569300:intron | 35.0% |
| GGAAGATAGCTTATTTGATG+AGG | - | chr4_1:71178981-71179000 | Msa0569300:CDS | 35.0% | |
| ACATTAATCTGAACGAGATG+TGG | + | chr4_1:71179116-71179135 | None:intergenic | 35.0% | |
| !! | AAATGTTATGGCCTTGTTCT+TGG | - | chr4_1:71179189-71179208 | Msa0569300:intron | 35.0% |
| ! | AAAATTGATGGCCATAGATG+AGG | + | chr4_1:71179304-71179323 | None:intergenic | 35.0% |
| TTGAGAACATGTTGTATCAC+TGG | - | chr4_1:71179334-71179353 | Msa0569300:five_prime_UTR | 35.0% | |
| TGGAGAATGAAGTTAGGGTT+TGG | + | chr4_1:71174370-71174389 | None:intergenic | 40.0% | |
| GTGACATTGTGAAGAAGAGA+TGG | + | chr4_1:71174390-71174409 | None:intergenic | 40.0% | |
| TATTAGGTGGAGCGAAACAA+TGG | - | chr4_1:71174552-71174571 | Msa0569300:exon | 40.0% | |
| ! | ACAGTTACGGTTTTTCGCTT+CGG | - | chr4_1:71174652-71174671 | Msa0569300:CDS | 40.0% |
| ! | TTTTTCGCTTCGGGCAAAAA+TGG | - | chr4_1:71174662-71174681 | Msa0569300:CDS | 40.0% |
| GAATGAATCCGAAACCGTAA+AGG | - | chr4_1:71174703-71174722 | Msa0569300:CDS | 40.0% | |
| TTTCATGTGGCCTGATAACA+AGG | - | chr4_1:71174736-71174755 | Msa0569300:intron | 40.0% | |
| CCACCTAATATACACACTCT+AGG | + | chr4_1:71174870-71174889 | None:intergenic | 40.0% | |
| CCTAGAGTGTGTATATTAGG+TGG | - | chr4_1:71174867-71174886 | Msa0569300:CDS | 40.0% | |
| AGAGTGTGTATATTAGGTGG+TGG | - | chr4_1:71174870-71174889 | Msa0569300:CDS | 40.0% | |
| !! | ATATTAGGTGGTGGATTTGG+TGG | - | chr4_1:71174879-71174898 | Msa0569300:CDS | 40.0% |
| GTTGATGCAGAATCCATGAT+AGG | - | chr4_1:71175010-71175029 | Msa0569300:intron | 40.0% | |
| CTCCTAAGTTACACCTATCA+TGG | + | chr4_1:71175026-71175045 | None:intergenic | 40.0% | |
| TTGTCAAATAGCGGCTATAG+TGG | - | chr4_1:71175273-71175292 | Msa0569300:intron | 40.0% | |
| TCGCAGATAGAGGAAAATAG+AGG | + | chr4_1:71175335-71175354 | None:intergenic | 40.0% | |
| !! | TTCTGCACTTTTTGCTTCTC+GGG | - | chr4_1:71175806-71175825 | Msa0569300:intron | 40.0% |
| GATAGAAGCTCGTACAACAT+TGG | + | chr4_1:71175915-71175934 | None:intergenic | 40.0% | |
| ATGTTGTACGAGCTTCTATC+TGG | - | chr4_1:71175915-71175934 | Msa0569300:intron | 40.0% | |
| GCATACAGAAGTGGATGAAT+GGG | - | chr4_1:71176014-71176033 | Msa0569300:intron | 40.0% | |
| TTCACACCCAAATGATCAGA+GGG | + | chr4_1:71176117-71176136 | None:intergenic | 40.0% | |
| ATTCACACCCAAATGATCAG+AGG | + | chr4_1:71176118-71176137 | None:intergenic | 40.0% | |
| TCTGATCATTTGGGTGTGAA+TGG | - | chr4_1:71176117-71176136 | Msa0569300:intron | 40.0% | |
| GGAACTGTTCATCTTGAAAG+TGG | - | chr4_1:71176162-71176181 | Msa0569300:intron | 40.0% | |
| ACCAGTCGTATTCGATATGA+AGG | + | chr4_1:71176188-71176207 | None:intergenic | 40.0% | |
| GGTGTTCTGCATATTGATCT+AGG | - | chr4_1:71176298-71176317 | Msa0569300:intron | 40.0% | |
| ! | TTTTCATTTCTTCGACAGCC+AGG | - | chr4_1:71176541-71176560 | Msa0569300:intron | 40.0% |
| AACTTTCTGCAAAGAGACAC+CGG | + | chr4_1:71176741-71176760 | None:intergenic | 40.0% | |
| AGAGAGAAAGACCTTTGGTA+AGG | - | chr4_1:71176781-71176800 | Msa0569300:CDS | 40.0% | |
| ! | ATTGTTGGTTGTGGTTACTC+TGG | - | chr4_1:71176824-71176843 | Msa0569300:CDS | 40.0% |
| ! | TTGTTGGTTGTGGTTACTCT+GGG | - | chr4_1:71176825-71176844 | Msa0569300:CDS | 40.0% |
| GCAGAGCGATTACAAAATAG+AGG | - | chr4_1:71176869-71176888 | Msa0569300:CDS | 40.0% | |
| ! | AGAAGTGCAAAGCAACATTG+TGG | + | chr4_1:71177053-71177072 | None:intergenic | 40.0% |
| GCTAAACAATATGGCGAACA+TGG | + | chr4_1:71177525-71177544 | None:intergenic | 40.0% | |
| CGCCATATTGTTTAGCACTA+TGG | - | chr4_1:71177529-71177548 | Msa0569300:CDS | 40.0% | |
| CCCCATAGTGCTAAACAATA+TGG | + | chr4_1:71177534-71177553 | None:intergenic | 40.0% | |
| GAAAAGGGATAATTGCATGC+TGG | + | chr4_1:71177891-71177910 | None:intergenic | 40.0% | |
| GCTGCCGTAGTTTAAGAAAA+GGG | + | chr4_1:71177906-71177925 | None:intergenic | 40.0% | |
| TGCTGCCGTAGTTTAAGAAA+AGG | + | chr4_1:71177907-71177926 | None:intergenic | 40.0% | |
| GATGTTAGGTTCTTTCATCC+AGG | - | chr4_1:71178024-71178043 | Msa0569300:intron | 40.0% | |
| TTAGGTTCTTTCATCCAGGA+AGG | - | chr4_1:71178028-71178047 | Msa0569300:intron | 40.0% | |
| ATTTGAAGACTCGGATTCAC+TGG | + | chr4_1:71178096-71178115 | None:intergenic | 40.0% | |
| TTGAAGCAGATCTGGTATTG+TGG | - | chr4_1:71178192-71178211 | Msa0569300:intron | 40.0% | |
| GAATATTCCAGATGAGGAAG+AGG | + | chr4_1:71178236-71178255 | None:intergenic | 40.0% | |
| GTTATTCCACTTAATGCCAG+GGG | - | chr4_1:71178269-71178288 | Msa0569300:intron | 40.0% | |
| ! | ATTTTCTCTTGGCGACTCTT+CGG | - | chr4_1:71178340-71178359 | Msa0569300:intron | 40.0% |
| TCGGCATTAAGGGATTCAAA+TGG | - | chr4_1:71178359-71178378 | Msa0569300:intron | 40.0% | |
| ATAAAATCACACCTGTGCAG+TGG | + | chr4_1:71178399-71178418 | None:intergenic | 40.0% | |
| ! | GGACTTTTATAGGACCAGAT+TGG | + | chr4_1:71178640-71178659 | None:intergenic | 40.0% |
| !! | CGCTATGATGGGACTTTTAT+AGG | + | chr4_1:71178650-71178669 | None:intergenic | 40.0% |
| CTAGGTGAGATGATGACTTT+GGG | - | chr4_1:71178786-71178805 | Msa0569300:CDS | 40.0% | |
| !!! | TTTCTCCGAGTTTTGTTGAC+GGG | - | chr4_1:71178826-71178845 | Msa0569300:intron | 40.0% |
| GTTAACCCGTCAACAAAACT+CGG | + | chr4_1:71178834-71178853 | None:intergenic | 40.0% | |
| !! | GTTGACGGGTTAACTTTAGA+AGG | - | chr4_1:71178840-71178859 | Msa0569300:intron | 40.0% |
| ! | TTAACTTTAGAAGGCCCTGT+TGG | - | chr4_1:71178849-71178868 | Msa0569300:intron | 40.0% |
| !!! | CGTTTTCTGTTTTTGCAGCT+AGG | - | chr4_1:71178960-71178979 | Msa0569300:CDS | 40.0% |
| CATTTGTGATGCCAAGAACA+AGG | + | chr4_1:71179203-71179222 | None:intergenic | 40.0% | |
| TCACAAATGACTGTGCAAGA+TGG | - | chr4_1:71179214-71179233 | Msa0569300:intron | 40.0% | |
| CACAAATGACTGTGCAAGAT+GGG | - | chr4_1:71179215-71179234 | Msa0569300:intron | 40.0% | |
| !!! | GTTGTATCACTGGCTTTTCT+AGG | - | chr4_1:71179344-71179363 | Msa0569300:five_prime_UTR | 40.0% |
| ! | CCTAAGTTGAGAGTCGTTAT+TGG | + | chr4_1:71179400-71179419 | None:intergenic | 40.0% |
| CCAATAACGACTCTCAACTT+AGG | - | chr4_1:71179397-71179416 | Msa0569300:five_prime_UTR | 40.0% | |
| ! | GAAGAGAAAGAAAGCGCGTA+CGG | + | chr4_1:71174453-71174472 | None:intergenic | 45.0% |
| ! | CAGTTACGGTTTTTCGCTTC+GGG | - | chr4_1:71174653-71174672 | Msa0569300:CDS | 45.0% |
| GAAATTCGTGTGCGCCTTTA+CGG | + | chr4_1:71174720-71174739 | None:intergenic | 45.0% | |
| TAAGGTTGGAATCACTCGAG+TGG | - | chr4_1:71174916-71174935 | Msa0569300:intron | 45.0% | |
| GCTCGATGATAAAAAACCGC+AGG | - | chr4_1:71174938-71174957 | Msa0569300:intron | 45.0% | |
| !! | GAGCATCTTCGTTGATGACA+TGG | - | chr4_1:71175043-71175062 | Msa0569300:intron | 45.0% |
| GTGTTGTCAATCGCAGATAG+AGG | + | chr4_1:71175345-71175364 | None:intergenic | 45.0% | |
| TAGGTCATAATTGCACGGTG+AGG | - | chr4_1:71175377-71175396 | Msa0569300:CDS | 45.0% | |
| CATAATTGCACGGTGAGGTA+TGG | - | chr4_1:71175382-71175401 | Msa0569300:CDS | 45.0% | |
| GCTTATCATGTGGGTGAGTT+AGG | + | chr4_1:71175689-71175708 | None:intergenic | 45.0% | |
| !! | TCTGCACTTTTTGCTTCTCG+GGG | - | chr4_1:71175807-71175826 | Msa0569300:intron | 45.0% |
| GATTGCTCTTGTCGATCAGT+CGG | - | chr4_1:71175872-71175891 | Msa0569300:intron | 45.0% | |
| TTGTACGAGCTTCTATCTGG+TGG | - | chr4_1:71175918-71175937 | Msa0569300:intron | 45.0% | |
| GGCATACAGAAGTGGATGAA+TGG | - | chr4_1:71176013-71176032 | Msa0569300:intron | 45.0% | |
| CAAAAACTGCACACCAGTGT+TGG | + | chr4_1:71176070-71176089 | None:intergenic | 45.0% | |
| TTTGCAGCCCTCTGATCATT+TGG | - | chr4_1:71176107-71176126 | Msa0569300:intron | 45.0% | |
| TTGCAGCCCTCTGATCATTT+GGG | - | chr4_1:71176108-71176127 | Msa0569300:intron | 45.0% | |
| GCCTTCATATCGAATACGAC+TGG | - | chr4_1:71176184-71176203 | Msa0569300:intron | 45.0% | |
| ATGCACTGTTTAAGTCCCTC+AGG | - | chr4_1:71176215-71176234 | Msa0569300:intron | 45.0% | |
| TGCACTGTTTAAGTCCCTCA+GGG | - | chr4_1:71176216-71176235 | Msa0569300:intron | 45.0% | |
| TTGATGTCAGGATACCCTGA+GGG | + | chr4_1:71176233-71176252 | None:intergenic | 45.0% | |
| ATTGATGTCAGGATACCCTG+AGG | + | chr4_1:71176234-71176253 | None:intergenic | 45.0% | |
| ! | CTTAAGAGTGTGGTCACTGA+AGG | + | chr4_1:71176340-71176359 | None:intergenic | 45.0% |
| ATTGGGAGCTGAAGCTAAAC+TGG | - | chr4_1:71176575-71176594 | Msa0569300:intron | 45.0% | |
| GCTAAACTGGATGTTGTACC+AGG | - | chr4_1:71176588-71176607 | Msa0569300:intron | 45.0% | |
| ATTGCGAATTCTGTTGCTCC+TGG | + | chr4_1:71176609-71176628 | None:intergenic | 45.0% | |
| !! | GCATCCTCTAGAGTTGAGAA+AGG | + | chr4_1:71176633-71176652 | None:intergenic | 45.0% |
| TGCACGTGTAAGTGCAATGA+AGG | - | chr4_1:71176650-71176669 | Msa0569300:intron | 45.0% | |
| CGTGTAAGTGCAATGAAGGA+CGG | - | chr4_1:71176654-71176673 | Msa0569300:intron | 45.0% | |
| ! | AGTGTGGCTATTGTTGGTTG+TGG | - | chr4_1:71176815-71176834 | Msa0569300:CDS | 45.0% |
| ! | TGTTGGTTGTGGTTACTCTG+GGG | - | chr4_1:71176826-71176845 | Msa0569300:CDS | 45.0% |
| ATTGTGGACCATCACCTAGT+TGG | + | chr4_1:71177037-71177056 | None:intergenic | 45.0% | |
| TTGCTTTGCACTTCTCTCCA+TGG | - | chr4_1:71177058-71177077 | Msa0569300:CDS | 45.0% | |
| TATATCTCACTGCCTTGCCA+TGG | + | chr4_1:71177078-71177097 | None:intergenic | 45.0% | |
| TGTTTAGCACTATGGGGATC+CGG | - | chr4_1:71177537-71177556 | Msa0569300:CDS | 45.0% | |
| ! | GATCTGGTATTGTGGACTGT+TGG | - | chr4_1:71178200-71178219 | Msa0569300:intron | 45.0% |
| TATTCCAGATGAGGAAGAGG+AGG | + | chr4_1:71178233-71178252 | None:intergenic | 45.0% | |
| ! | CACCCACGGATATTTTCTCT+TGG | - | chr4_1:71178329-71178348 | Msa0569300:intron | 45.0% |
| CGCCAAGAGAAAATATCCGT+GGG | + | chr4_1:71178334-71178353 | None:intergenic | 45.0% | |
| TCGCCAAGAGAAAATATCCG+TGG | + | chr4_1:71178335-71178354 | None:intergenic | 45.0% | |
| AATCTCTGGGCTGCAATCAA+TGG | - | chr4_1:71178545-71178564 | Msa0569300:intron | 45.0% | |
| ATCTCTGGGCTGCAATCAAT+GGG | - | chr4_1:71178546-71178565 | Msa0569300:intron | 45.0% | |
| AGTCCCATCATAGCGATCTT+CGG | - | chr4_1:71178655-71178674 | Msa0569300:intron | 45.0% | |
| GGTGCTAGGTTTCAAAACCT+AGG | - | chr4_1:71178768-71178787 | Msa0569300:CDS | 45.0% | |
| CCAAAGTCATCATCTCACCT+AGG | + | chr4_1:71178788-71178807 | None:intergenic | 45.0% | |
| CCTAGGTGAGATGATGACTT+TGG | - | chr4_1:71178785-71178804 | Msa0569300:CDS | 45.0% | |
| GTAAGACCAACATACCAGCA+TGG | + | chr4_1:71178875-71178894 | None:intergenic | 45.0% | |
| GCTACAGAGTAGCTTATCCA+AGG | - | chr4_1:71179078-71179097 | Msa0569300:CDS | 45.0% | |
| AGCTTATCCAAGGTCCTTTC+AGG | - | chr4_1:71179088-71179107 | Msa0569300:CDS | 45.0% | |
| GTTGAGAGTCGTTATTGGCA+GGG | + | chr4_1:71179395-71179414 | None:intergenic | 45.0% | |
| AGTTGAGAGTCGTTATTGGC+AGG | + | chr4_1:71179396-71179415 | None:intergenic | 45.0% | |
| !!! | ATTTTTATAAAAATTTAAAC+GGG | - | chr4_1:71177438-71177457 | Msa0569300:intron | 5.0% |
| GCAACTGTTGAATCGGGAAG+TGG | - | chr4_1:71174241-71174260 | Msa0569300:three_prime_UTR | 50.0% | |
| TTCGCTTCGGGCAAAAATGG+CGG | - | chr4_1:71174665-71174684 | Msa0569300:CDS | 50.0% | |
| TCGGGCAAAAATGGCGGTAA+TGG | - | chr4_1:71174671-71174690 | Msa0569300:CDS | 50.0% | |
| AGGCGCACACGAATTTCATG+TGG | - | chr4_1:71174723-71174742 | Msa0569300:intron | 50.0% | |
| CACACTCTAGGCTTCTGCAA+GGG | + | chr4_1:71174858-71174877 | None:intergenic | 50.0% | |
| ACACACTCTAGGCTTCTGCA+AGG | + | chr4_1:71174859-71174878 | None:intergenic | 50.0% | |
| GGAAATAGCTCCTCGCTTCT+CGG | - | chr4_1:71176035-71176054 | Msa0569300:intron | 50.0% | |
| GGATCCAACACATCTACTCG+TGG | - | chr4_1:71176138-71176157 | Msa0569300:intron | 50.0% | |
| TCCAACACATCTACTCGTGG+AGG | - | chr4_1:71176141-71176160 | Msa0569300:intron | 50.0% | |
| TCCTCCACGAGTAGATGTGT+TGG | + | chr4_1:71176145-71176164 | None:intergenic | 50.0% | |
| TTGCACTTCTCTCCATGGCA+AGG | - | chr4_1:71177063-71177082 | Msa0569300:CDS | 50.0% | |
| GAATGCTACATCAGTTCCCC+AGG | - | chr4_1:71177797-71177816 | Msa0569300:CDS | 50.0% | |
| GAGCTACAACCTGCTGAAAG+AGG | - | chr4_1:71178152-71178171 | Msa0569300:intron | 50.0% | |
| CTCTGCTTTCCTCTTTCAGC+AGG | + | chr4_1:71178164-71178183 | None:intergenic | 50.0% | |
| CAGATGAGGAAGAGGAGGTT+TGG | + | chr4_1:71178228-71178247 | None:intergenic | 50.0% | |
| CAAACCTCCTCTTCCTCATC+TGG | - | chr4_1:71178226-71178245 | Msa0569300:intron | 50.0% | |
| TTCGTGTTAAGGGTCACCCA+CGG | - | chr4_1:71178315-71178334 | Msa0569300:intron | 50.0% | |
| TTGGCGACTCTTCGGCATTA+AGG | - | chr4_1:71178348-71178367 | Msa0569300:intron | 50.0% | |
| TGGCGACTCTTCGGCATTAA+GGG | - | chr4_1:71178349-71178368 | Msa0569300:intron | 50.0% | |
| GTCCCATCATAGCGATCTTC+GGG | - | chr4_1:71178656-71178675 | Msa0569300:intron | 50.0% | |
| TCCCATCATAGCGATCTTCG+GGG | - | chr4_1:71178657-71178676 | Msa0569300:intron | 50.0% | |
| TCCCCGAAGATCGCTATGAT+GGG | + | chr4_1:71178661-71178680 | None:intergenic | 50.0% | |
| TTCCCCGAAGATCGCTATGA+TGG | + | chr4_1:71178662-71178681 | None:intergenic | 50.0% | |
| ACATACCAGCATGGCCAACA+GGG | + | chr4_1:71178866-71178885 | None:intergenic | 50.0% | |
| AACATACCAGCATGGCCAAC+AGG | + | chr4_1:71178867-71178886 | None:intergenic | 50.0% | |
| TGTTGGCCATGCTGGTATGT+TGG | - | chr4_1:71178866-71178885 | Msa0569300:intron | 50.0% | |
| GACTTAAAGTGGGGATCAGC+TGG | - | chr4_1:71179023-71179042 | Msa0569300:CDS | 50.0% | |
| AACGAGATGTGGAGCCTGAA+AGG | + | chr4_1:71179105-71179124 | None:intergenic | 50.0% | |
| GACTAAGGACGACGCAGATA+AGG | + | chr4_1:71179437-71179456 | None:intergenic | 50.0% | |
| CGTACGGTGAAAAGCGACGA+GGG | + | chr4_1:71174437-71174456 | None:intergenic | 55.0% | |
| CGCTGCTTCTCCAATTGCTC+GGG | + | chr4_1:71174589-71174608 | None:intergenic | 55.0% | |
| CCGCTGCTTCTCCAATTGCT+CGG | + | chr4_1:71174590-71174609 | None:intergenic | 55.0% | |
| CCGAGCAATTGGAGAAGCAG+CGG | - | chr4_1:71174587-71174606 | Msa0569300:CDS | 55.0% | |
| CGTGTGCGCCTTTACGGTTT+CGG | + | chr4_1:71174714-71174733 | None:intergenic | 55.0% | |
| TGGGTGAGTTAGGCCGTCTT+TGG | + | chr4_1:71175679-71175698 | None:intergenic | 55.0% | |
| TCCTCGCTTCTCGGATTTGC+TGG | - | chr4_1:71176044-71176063 | Msa0569300:intron | 55.0% | |
| !! | TCGGATTTGCTGGCCAACAC+TGG | - | chr4_1:71176054-71176073 | Msa0569300:intron | 55.0% |
| CATTTCTTCGACAGCCAGGC+TGG | - | chr4_1:71176545-71176564 | Msa0569300:intron | 55.0% | |
| ! | AGCCAGGCTGGTTCTTGCAT+TGG | - | chr4_1:71176557-71176576 | Msa0569300:intron | 55.0% |
| ! | GCCAGGCTGGTTCTTGCATT+GGG | - | chr4_1:71176558-71176577 | Msa0569300:intron | 55.0% |
| TCCCAATGCAAGAACCAGCC+TGG | + | chr4_1:71176562-71176581 | None:intergenic | 55.0% | |
| TATTGCCAGGTGGGGCAGTT+GGG | + | chr4_1:71176931-71176950 | None:intergenic | 55.0% | |
| GGCTTCTCTATTGCCAGGTG+GGG | + | chr4_1:71176939-71176958 | None:intergenic | 55.0% | |
| CGGCTTCTCTATTGCCAGGT+GGG | + | chr4_1:71176940-71176959 | None:intergenic | 55.0% | |
| AGTGCGGCTTCTCTATTGCC+AGG | + | chr4_1:71176944-71176963 | None:intergenic | 55.0% | |
| TTGTACAGCCCTGGCCAACT+AGG | - | chr4_1:71177020-71177039 | Msa0569300:intron | 55.0% | |
| GACCATCACCTAGTTGGCCA+GGG | + | chr4_1:71177031-71177050 | None:intergenic | 55.0% | |
| TCCACTTAATGCCAGGGGAC+AGG | - | chr4_1:71178274-71178293 | Msa0569300:intron | 55.0% | |
| ACTTAATGCCAGGGGACAGG+CGG | - | chr4_1:71178277-71178296 | Msa0569300:intron | 55.0% | |
| AATCACACCTGTGCAGTGGC+TGG | + | chr4_1:71178395-71178414 | None:intergenic | 55.0% | |
| !! | GGCGTCCGCTTTTGCCATTT+AGG | - | chr4_1:71178567-71178586 | Msa0569300:intron | 55.0% |
| TGTGGAGCCTGAAAGGACCT+TGG | + | chr4_1:71179098-71179117 | None:intergenic | 55.0% | |
| TCGGGAAGTGGCAGAAAGCG+TGG | - | chr4_1:71174253-71174272 | Msa0569300:three_prime_UTR | 60.0% | |
| CGGTGAAAAGCGACGAGGGA+GGG | + | chr4_1:71174433-71174452 | None:intergenic | 60.0% | |
| ACGGTGAAAAGCGACGAGGG+AGG | + | chr4_1:71174434-71174453 | None:intergenic | 60.0% | |
| GCGTACGGTGAAAAGCGACG+AGG | + | chr4_1:71174438-71174457 | None:intergenic | 60.0% | |
| GCACGCTGTTCCCGAGCAAT+TGG | - | chr4_1:71174576-71174595 | Msa0569300:CDS | 60.0% | |
| GCCAGCAAATCCGAGAAGCG+AGG | + | chr4_1:71176048-71176067 | None:intergenic | 60.0% | |
| CTATTGCCAGGTGGGGCAGT+TGG | + | chr4_1:71176932-71176951 | None:intergenic | 60.0% | |
| GCGGCTTCTCTATTGCCAGG+TGG | + | chr4_1:71176941-71176960 | None:intergenic | 60.0% | |
| AGCCCTGGCCAACTAGGTGA+TGG | - | chr4_1:71177026-71177045 | Msa0569300:intron | 60.0% | |
| GGACCATCACCTAGTTGGCC+AGG | + | chr4_1:71177032-71177051 | None:intergenic | 60.0% | |
| GCCTGTCCCCTGGCATTAAG+TGG | + | chr4_1:71178278-71178297 | None:intergenic | 60.0% | |
| ATCTGTTTCCGCCTGTCCCC+TGG | + | chr4_1:71178288-71178307 | None:intergenic | 60.0% | |
| GATCCTTCCAGCCACTGCAC+AGG | - | chr4_1:71178385-71178404 | Msa0569300:intron | 60.0% | |
| ACACCTGTGCAGTGGCTGGA+AGG | + | chr4_1:71178391-71178410 | None:intergenic | 60.0% | |
| AGCGACGAGGGAGGGTGATG+CGG | + | chr4_1:71174425-71174444 | None:intergenic | 65.0% | |
| ATCTGCCCAACTGCCCCACC+TGG | - | chr4_1:71176923-71176942 | Msa0569300:CDS | 65.0% | |
| GAAGGCCCTGTTGGCCATGC+TGG | - | chr4_1:71178858-71178877 | Msa0569300:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 71174236 | 71179464 | 71174236 | ID=Msa0569300;Name=Msa0569300 |
| chr4_1 | mRNA | 71174236 | 71179464 | 71174236 | ID=Msa0569300-mRNA-1;Parent=Msa0569300;Name=Msa0569300-mRNA-1;_AED=0.12;_eAED=0.12;_QI=167|1|1|1|1|1|11|332|537 |
| chr4_1 | exon | 71174236 | 71174722 | 71174236 | ID=Msa0569300-mRNA-1:exon:24088;Parent=Msa0569300-mRNA-1 |
| chr4_1 | exon | 71174821 | 71174924 | 71174821 | ID=Msa0569300-mRNA-1:exon:24087;Parent=Msa0569300-mRNA-1 |
| chr4_1 | exon | 71175112 | 71175188 | 71175112 | ID=Msa0569300-mRNA-1:exon:24086;Parent=Msa0569300-mRNA-1 |
| chr4_1 | exon | 71175294 | 71175668 | 71175294 | ID=Msa0569300-mRNA-1:exon:24085;Parent=Msa0569300-mRNA-1 |
| chr4_1 | exon | 71176733 | 71176945 | 71176733 | ID=Msa0569300-mRNA-1:exon:24084;Parent=Msa0569300-mRNA-1 |
| chr4_1 | exon | 71177044 | 71177137 | 71177044 | ID=Msa0569300-mRNA-1:exon:24083;Parent=Msa0569300-mRNA-1 |
| chr4_1 | exon | 71177495 | 71177678 | 71177495 | ID=Msa0569300-mRNA-1:exon:24082;Parent=Msa0569300-mRNA-1 |
| chr4_1 | exon | 71177761 | 71177827 | 71177761 | ID=Msa0569300-mRNA-1:exon:24081;Parent=Msa0569300-mRNA-1 |
| chr4_1 | exon | 71178741 | 71178836 | 71178741 | ID=Msa0569300-mRNA-1:exon:24080;Parent=Msa0569300-mRNA-1 |
| chr4_1 | exon | 71178943 | 71179142 | 71178943 | ID=Msa0569300-mRNA-1:exon:24079;Parent=Msa0569300-mRNA-1 |
| chr4_1 | exon | 71179249 | 71179464 | 71179249 | ID=Msa0569300-mRNA-1:exon:24078;Parent=Msa0569300-mRNA-1 |
| chr4_1 | five_prime_UTR | 71179298 | 71179464 | 71179298 | ID=Msa0569300-mRNA-1:five_prime_utr;Parent=Msa0569300-mRNA-1 |
| chr4_1 | CDS | 71179249 | 71179297 | 71179249 | ID=Msa0569300-mRNA-1:cds;Parent=Msa0569300-mRNA-1 |
| chr4_1 | CDS | 71178943 | 71179142 | 71178943 | ID=Msa0569300-mRNA-1:cds;Parent=Msa0569300-mRNA-1 |
| chr4_1 | CDS | 71178741 | 71178836 | 71178741 | ID=Msa0569300-mRNA-1:cds;Parent=Msa0569300-mRNA-1 |
| chr4_1 | CDS | 71177761 | 71177827 | 71177761 | ID=Msa0569300-mRNA-1:cds;Parent=Msa0569300-mRNA-1 |
| chr4_1 | CDS | 71177495 | 71177678 | 71177495 | ID=Msa0569300-mRNA-1:cds;Parent=Msa0569300-mRNA-1 |
| chr4_1 | CDS | 71177044 | 71177137 | 71177044 | ID=Msa0569300-mRNA-1:cds;Parent=Msa0569300-mRNA-1 |
| chr4_1 | CDS | 71176733 | 71176945 | 71176733 | ID=Msa0569300-mRNA-1:cds;Parent=Msa0569300-mRNA-1 |
| chr4_1 | CDS | 71175294 | 71175668 | 71175294 | ID=Msa0569300-mRNA-1:cds;Parent=Msa0569300-mRNA-1 |
| chr4_1 | CDS | 71175112 | 71175188 | 71175112 | ID=Msa0569300-mRNA-1:cds;Parent=Msa0569300-mRNA-1 |
| chr4_1 | CDS | 71174821 | 71174924 | 71174821 | ID=Msa0569300-mRNA-1:cds;Parent=Msa0569300-mRNA-1 |
| chr4_1 | CDS | 71174568 | 71174722 | 71174568 | ID=Msa0569300-mRNA-1:cds;Parent=Msa0569300-mRNA-1 |
| chr4_1 | three_prime_UTR | 71174236 | 71174567 | 71174236 | ID=Msa0569300-mRNA-1:three_prime_utr;Parent=Msa0569300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
