Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0571110 | XP_013446985.1 | 93.818 | 275 | 16 | 1 | 48 | 322 | 48 | 321 | 1.29e-141 | 413 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0571110 | sp|Q9C5D3|HIP7_ARATH | 58.451 | 284 | 103 | 4 | 52 | 322 | 74 | 355 | 2.78e-76 | 240 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0571110 | A0A072TUA8 | 93.818 | 275 | 16 | 1 | 48 | 322 | 48 | 321 | 6.16e-142 | 413 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0096800 | Msa0571110 | 0.817161 | 3.806907e-52 | -8.615850e-47 |
| Msa0571110 | Msa0620200 | 0.824300 | 8.695657e-54 | -8.615850e-47 |
| Msa0571110 | Msa0829330 | 0.809118 | 2.215865e-50 | -8.615850e-47 |
| Msa0571110 | Msa0880470 | 0.826253 | 3.002285e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0571110 | MtrunA17_Chr8g0386231 | 93.818 | 275 | 16 | 1 | 48 | 322 | 48 | 321 | 1.19e-145 | 413 |
| Msa0571110 | MtrunA17_Chr3g0132051 | 53.506 | 271 | 87 | 6 | 52 | 322 | 35 | 266 | 9.91e-80 | 243 |
| Msa0571110 | MtrunA17_Chr3g0132061 | 51.389 | 288 | 103 | 4 | 52 | 322 | 35 | 302 | 1.46e-76 | 236 |
| Msa0571110 | MtrunA17_Chr2g0290471 | 49.084 | 273 | 103 | 6 | 50 | 322 | 33 | 269 | 2.05e-53 | 176 |
| Msa0571110 | MtrunA17_Chr4g0001151 | 68.000 | 125 | 37 | 1 | 52 | 176 | 169 | 290 | 5.16e-48 | 164 |
| Msa0571110 | MtrunA17_Chr3g0094841 | 35.531 | 273 | 110 | 6 | 53 | 322 | 28 | 237 | 1.90e-41 | 144 |
| Msa0571110 | MtrunA17_Chr3g0128091 | 35.897 | 312 | 157 | 11 | 19 | 321 | 6 | 283 | 1.64e-32 | 122 |
| Msa0571110 | MtrunA17_Chr4g0028461 | 31.183 | 279 | 159 | 6 | 54 | 322 | 69 | 324 | 1.42e-30 | 117 |
| Msa0571110 | MtrunA17_Chr1g0180631 | 31.742 | 356 | 159 | 11 | 26 | 322 | 3 | 333 | 2.12e-29 | 114 |
| Msa0571110 | MtrunA17_Chr5g0429111 | 36.810 | 163 | 91 | 2 | 54 | 216 | 56 | 206 | 1.30e-28 | 112 |
| Msa0571110 | MtrunA17_Chr8g0337951 | 34.386 | 285 | 149 | 11 | 37 | 321 | 18 | 264 | 1.03e-27 | 108 |
| Msa0571110 | MtrunA17_Chr2g0327311 | 33.526 | 173 | 105 | 4 | 50 | 216 | 64 | 232 | 6.07e-24 | 100 |
| Msa0571110 | MtrunA17_Chr7g0264601 | 34.343 | 198 | 100 | 3 | 43 | 217 | 5 | 195 | 1.10e-21 | 94.0 |
| Msa0571110 | MtrunA17_Chr8g0343041 | 50.000 | 62 | 31 | 0 | 155 | 216 | 77 | 138 | 2.22e-14 | 72.4 |
| Msa0571110 | MtrunA17_Chr6g0454851 | 50.746 | 67 | 32 | 1 | 50 | 116 | 17 | 82 | 2.19e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0571110 | AT5G50740.5 | 52.963 | 270 | 112 | 4 | 53 | 322 | 29 | 283 | 2.33e-84 | 256 |
| Msa0571110 | AT5G50740.1 | 52.963 | 270 | 112 | 4 | 53 | 322 | 29 | 283 | 2.33e-84 | 256 |
| Msa0571110 | AT5G63530.2 | 58.451 | 284 | 103 | 4 | 52 | 322 | 59 | 340 | 1.56e-77 | 241 |
| Msa0571110 | AT5G50740.3 | 50.000 | 322 | 129 | 5 | 1 | 322 | 1 | 290 | 2.47e-77 | 238 |
| Msa0571110 | AT5G63530.1 | 58.451 | 284 | 103 | 4 | 52 | 322 | 74 | 355 | 2.83e-77 | 240 |
| Msa0571110 | AT3G02960.1 | 39.114 | 271 | 104 | 6 | 52 | 322 | 37 | 246 | 3.08e-50 | 167 |
| Msa0571110 | AT5G50740.2 | 62.400 | 125 | 44 | 1 | 53 | 177 | 29 | 150 | 2.31e-46 | 154 |
| Msa0571110 | AT5G50740.4 | 51.412 | 177 | 66 | 3 | 1 | 177 | 1 | 157 | 5.16e-40 | 138 |
| Msa0571110 | AT5G24580.4 | 33.333 | 282 | 154 | 6 | 53 | 321 | 58 | 318 | 3.59e-32 | 122 |
| Msa0571110 | AT5G24580.1 | 33.333 | 282 | 154 | 6 | 53 | 321 | 58 | 318 | 3.59e-32 | 122 |
| Msa0571110 | AT5G24580.2 | 33.333 | 282 | 154 | 6 | 53 | 321 | 57 | 317 | 3.99e-32 | 122 |
| Msa0571110 | AT5G24580.3 | 32.270 | 282 | 154 | 7 | 53 | 321 | 58 | 315 | 5.89e-29 | 113 |
| Msa0571110 | AT2G36950.1 | 31.751 | 337 | 161 | 9 | 53 | 322 | 52 | 386 | 7.26e-29 | 114 |
| Msa0571110 | AT5G03380.1 | 35.556 | 270 | 135 | 8 | 26 | 264 | 3 | 264 | 2.49e-28 | 113 |
| Msa0571110 | AT5G03380.2 | 35.270 | 241 | 121 | 6 | 55 | 264 | 1 | 237 | 5.30e-26 | 106 |
| Msa0571110 | AT5G60800.1 | 35.612 | 278 | 149 | 5 | 53 | 322 | 28 | 283 | 1.27e-22 | 95.9 |
| Msa0571110 | AT5G60800.2 | 35.252 | 278 | 150 | 5 | 53 | 322 | 28 | 283 | 1.59e-21 | 93.2 |
| Msa0571110 | AT5G24580.5 | 31.474 | 251 | 138 | 6 | 84 | 321 | 2 | 231 | 7.39e-21 | 89.7 |
| Msa0571110 | AT1G29000.1 | 33.333 | 165 | 104 | 3 | 54 | 216 | 18 | 178 | 2.02e-19 | 87.0 |
| Msa0571110 | AT1G29000.2 | 33.333 | 165 | 104 | 3 | 54 | 216 | 18 | 178 | 2.02e-19 | 87.0 |
| Msa0571110 | AT2G28090.1 | 29.907 | 214 | 136 | 3 | 36 | 247 | 14 | 215 | 2.71e-16 | 77.4 |
Find 68 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTTCTTTGGTTTCTTT+TGG | 0.148425 | 4_1:+73606033 | None:intergenic |
| TCTTGTTCTGAAGGTGGTTT+TGG | 0.150297 | 4_1:+73606750 | None:intergenic |
| AAGACTTTAAGCACAATTTC+TGG | 0.185344 | 4_1:+73607042 | None:intergenic |
| TCTCACAAGGTTGTTGTTAA+AGG | 0.201668 | 4_1:-73606852 | Msa0571110:CDS |
| TAAGGTTAATATTGGAATTA+TGG | 0.241011 | 4_1:-73605725 | Msa0571110:three_prime_UTR |
| GGTAATGATAAGGTTAATAT+TGG | 0.245138 | 4_1:-73605733 | Msa0571110:three_prime_UTR |
| TTCTTCTCTTCTTCTTTCTT+CGG | 0.322109 | 4_1:+73607129 | None:intergenic |
| AGGTGGTGCAGAAGAAGTTA+AGG | 0.374215 | 4_1:-73605896 | Msa0571110:CDS |
| ATGATAATGATAATGAAATC+TGG | 0.375338 | 4_1:-73605683 | Msa0571110:three_prime_UTR |
| AGCTGCAGCTGCAGCTGCAG+AGG | 0.381633 | 4_1:-73605947 | Msa0571110:CDS |
| TCCTCTACTTTCGTTTCCTC+AGG | 0.384635 | 4_1:+73607171 | None:intergenic |
| GGCACATCTTACCCAGGATA+TGG | 0.400133 | 4_1:+73605653 | None:intergenic |
| TACATGATAGAACAAGCATT+TGG | 0.401152 | 4_1:+73605763 | None:intergenic |
| TCTTTCTTCGGTGGTTCCTC+TGG | 0.408707 | 4_1:+73607141 | None:intergenic |
| GCTGCAGCTGCAGCTGCAGA+GGG | 0.436837 | 4_1:-73605946 | Msa0571110:CDS |
| GAATATGTTTACAAGAGAAC+TGG | 0.441360 | 4_1:-73606102 | Msa0571110:CDS |
| GATCAGAAAGGGAGTGGTGA+AGG | 0.441866 | 4_1:-73605985 | Msa0571110:CDS |
| ACTCTTTCAAGTACCTTCAA+TGG | 0.450498 | 4_1:+73606816 | None:intergenic |
| AGGAGTTGAATCAGCTGAAC+CGG | 0.452591 | 4_1:-73606181 | Msa0571110:CDS |
| TCTGGGTGAAAGCCATATCC+TGG | 0.459053 | 4_1:-73605665 | Msa0571110:three_prime_UTR |
| ACTAATGAGTTCTTCAGATC+CGG | 0.461599 | 4_1:+73606162 | None:intergenic |
| GAGAGAGAGATATAGAAGCT+AGG | 0.466451 | 4_1:+73607381 | None:intergenic |
| AAAATTTGAGGAGGGTAAGC+TGG | 0.466832 | 4_1:+73605799 | None:intergenic |
| GTAACTTCCTTAGATTCCTC+CGG | 0.468732 | 4_1:+73607069 | None:intergenic |
| AAAGTTCGTCGTTCACTCAA+AGG | 0.473903 | 4_1:-73606994 | Msa0571110:CDS |
| GAGAGATATAGAAGCTAGGT+TGG | 0.475786 | 4_1:+73607385 | None:intergenic |
| CCACCTCCTCCATCACCACT+TGG | 0.479378 | 4_1:+73605913 | None:intergenic |
| TTCTCTTCTTCTTTCTTCGG+TGG | 0.482801 | 4_1:+73607132 | None:intergenic |
| GAAAGGGAGTGGTGAAGGAG+AGG | 0.503599 | 4_1:-73605980 | Msa0571110:CDS |
| GAAAGAGAAACCTAAGCCAC+AGG | 0.507799 | 4_1:-73606712 | Msa0571110:CDS |
| GATGGAAAACCAAGTGGTGA+TGG | 0.509668 | 4_1:-73605922 | Msa0571110:CDS |
| TGCAGAAGAAGTTAAGGTGG+TGG | 0.510388 | 4_1:-73605890 | Msa0571110:CDS |
| GTCAGTCACACTAAACCAAT+GGG | 0.518992 | 4_1:-73607322 | Msa0571110:exon |
| GCTGCAGCTGCAGAGGGAGA+TGG | 0.525345 | 4_1:-73605940 | Msa0571110:CDS |
| GGTTGTTGTTAAAGGAGAAA+AGG | 0.525432 | 4_1:-73606844 | Msa0571110:CDS |
| AGAAAAGGCGGATCCATTGA+AGG | 0.529919 | 4_1:-73606829 | Msa0571110:CDS |
| TGATAATGATAATGAAATCT+GGG | 0.533220 | 4_1:-73605682 | Msa0571110:three_prime_UTR |
| AACTCATTAGTGACAGTGAA+AGG | 0.539145 | 4_1:-73606150 | Msa0571110:CDS |
| GGAAGAAAAGAAAGCTGAAG+AGG | 0.548605 | 4_1:-73606691 | Msa0571110:intron |
| AGAGAACCAACCTCTCCCAT+TGG | 0.550262 | 4_1:+73607307 | None:intergenic |
| AAAGTCTTCATGCATTGTGA+AGG | 0.559957 | 4_1:-73607027 | Msa0571110:CDS |
| TAAAACTCCGTACCATACCT+TGG | 0.562455 | 4_1:+73605835 | None:intergenic |
| AGAATCACTATCATAACCTT+AGG | 0.564388 | 4_1:+73606577 | None:intergenic |
| TAATCCACCAAGGTATGGTA+CGG | 0.565997 | 4_1:-73605842 | Msa0571110:CDS |
| CATCACTGAAAATTTGAGGA+GGG | 0.566558 | 4_1:+73605791 | None:intergenic |
| TGGTGCAGAAGAAGTTAAGG+TGG | 0.570601 | 4_1:-73605893 | Msa0571110:CDS |
| AGTGTGACTGACTGACTCAA+AGG | 0.570706 | 4_1:+73607333 | None:intergenic |
| AGTCAGTCACACTAAACCAA+TGG | 0.572674 | 4_1:-73607323 | Msa0571110:exon |
| CCAAGTGGTGATGGAGGAGG+TGG | 0.579532 | 4_1:-73605913 | Msa0571110:CDS |
| AAACCAAGTGGTGATGGAGG+AGG | 0.582262 | 4_1:-73605916 | Msa0571110:CDS |
| AACTCCGTACCATACCTTGG+TGG | 0.588756 | 4_1:+73605838 | None:intergenic |
| AGACGCATTGAGAAAATCAA+AGG | 0.589980 | 4_1:-73606511 | Msa0571110:intron |
| TGAGGAGGGTAAGCTGGACC+AGG | 0.590722 | 4_1:+73605805 | None:intergenic |
| TACTGCAGGGAAAAGTACAT+AGG | 0.593196 | 4_1:+73605631 | None:intergenic |
| GGAAAACCAAGTGGTGATGG+AGG | 0.597768 | 4_1:-73605919 | Msa0571110:CDS |
| ACTGCAGGGAAAAGTACATA+GGG | 0.600268 | 4_1:+73605632 | None:intergenic |
| CTGGGTGAAAGCCATATCCT+GGG | 0.602074 | 4_1:-73605664 | Msa0571110:three_prime_UTR |
| TACTGATTGCAAATCTCACA+AGG | 0.619184 | 4_1:-73606865 | Msa0571110:CDS |
| TCATCACTGAAAATTTGAGG+AGG | 0.625780 | 4_1:+73605790 | None:intergenic |
| ACCTGAGGAAACGAAAGTAG+AGG | 0.626889 | 4_1:-73607172 | Msa0571110:CDS |
| TCACACTAAACCAATGGGAG+AGG | 0.633440 | 4_1:-73607317 | Msa0571110:intron |
| AGGTACTTGAAAGAGTTCAG+AGG | 0.641050 | 4_1:-73606809 | Msa0571110:CDS |
| TAGAAGCTAGGTTGGTTCTG+CGG | 0.646213 | 4_1:+73607393 | None:intergenic |
| TGTTGTTAAAGGAGAAAAGG+CGG | 0.683376 | 4_1:-73606841 | Msa0571110:CDS |
| ACTTTAAGCACAATTTCTGG+CGG | 0.689016 | 4_1:+73607045 | None:intergenic |
| ACATAGGGCACATCTTACCC+AGG | 0.692217 | 4_1:+73605647 | None:intergenic |
| ATAGGAAGAAAAGAAACCTG+AGG | 0.703898 | 4_1:-73607187 | Msa0571110:intron |
| GAGGGAGATGGAAAACCAAG+TGG | 0.706478 | 4_1:-73605928 | Msa0571110:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATTTTAATAATATTGTTTC+TGG | - | chr4_1:73605733-73605752 | Msa0571110:three_prime_UTR | 15.0% |
| !!! | CATTTTAATAATATTGTTTC+TGG | - | chr4_1:73605733-73605752 | Msa0571110:three_prime_UTR | 15.0% |
| !!! | TTAAAAACACCGAAATTTTA+AGG | - | chr4_1:73605540-73605559 | Msa0571110:three_prime_UTR | 20.0% |
| !!! | CTTTTTTTGCCTTAAAATTT+CGG | + | chr4_1:73605552-73605571 | None:intergenic | 20.0% |
| !!! | TTTTTGTTGTTGTTTTGAAT+AGG | - | chr4_1:73605763-73605782 | Msa0571110:CDS | 20.0% |
| !!! | AGAAAAAAAGTGTAAAGAAA+AGG | + | chr4_1:73606022-73606041 | None:intergenic | 20.0% |
| !! | TAATGATTAATTGTTTGTGA+TGG | - | chr4_1:73606055-73606074 | Msa0571110:CDS | 20.0% |
| !! | CTTGATAAAATATTTGTAAG+TGG | - | chr4_1:73606698-73606717 | Msa0571110:CDS | 20.0% |
| !! | TTAAAATTATATTCACATGC+AGG | - | chr4_1:73606767-73606786 | Msa0571110:CDS | 20.0% |
| !!! | AATATTATTTTAATCCACCA+AGG | - | chr4_1:73607116-73607135 | Msa0571110:CDS | 20.0% |
| !! | TGTTCTATCATGTAAAAATT+TGG | - | chr4_1:73607214-73607233 | Msa0571110:intron | 20.0% |
| !!! | GTAAAAATTTGGTAATGATA+AGG | - | chr4_1:73607225-73607244 | Msa0571110:intron | 20.0% |
| !! | TAAGGTTAATATTGGAATTA+TGG | - | chr4_1:73607243-73607262 | Msa0571110:intron | 20.0% |
| !!! | ATGATAATGATAATGAAATC+TGG | - | chr4_1:73607285-73607304 | Msa0571110:intron | 20.0% |
| !!! | TGATAATGATAATGAAATCT+GGG | - | chr4_1:73607286-73607305 | Msa0571110:intron | 20.0% |
| !!! | TTAAAAACACCGAAATTTTA+AGG | - | chr4_1:73605540-73605559 | Msa0571110:three_prime_UTR | 20.0% |
| !!! | CTTTTTTTGCCTTAAAATTT+CGG | + | chr4_1:73605552-73605571 | None:intergenic | 20.0% |
| !!! | TTTTTGTTGTTGTTTTGAAT+AGG | - | chr4_1:73605763-73605782 | Msa0571110:CDS | 20.0% |
| !!! | AGAAAAAAAGTGTAAAGAAA+AGG | + | chr4_1:73606022-73606041 | None:intergenic | 20.0% |
| !! | TAATGATTAATTGTTTGTGA+TGG | - | chr4_1:73606055-73606074 | Msa0571110:CDS | 20.0% |
| !! | CTTGATAAAATATTTGTAAG+TGG | - | chr4_1:73606698-73606717 | Msa0571110:CDS | 20.0% |
| !! | TTAAAATTATATTCACATGC+AGG | - | chr4_1:73606767-73606786 | Msa0571110:CDS | 20.0% |
| !!! | AATATTATTTTAATCCACCA+AGG | - | chr4_1:73607116-73607135 | Msa0571110:CDS | 20.0% |
| !! | TGTTCTATCATGTAAAAATT+TGG | - | chr4_1:73607214-73607233 | Msa0571110:intron | 20.0% |
| !!! | GTAAAAATTTGGTAATGATA+AGG | - | chr4_1:73607225-73607244 | Msa0571110:intron | 20.0% |
| !! | TAAGGTTAATATTGGAATTA+TGG | - | chr4_1:73607243-73607262 | Msa0571110:intron | 20.0% |
| !!! | ATGATAATGATAATGAAATC+TGG | - | chr4_1:73607285-73607304 | Msa0571110:intron | 20.0% |
| !!! | TGATAATGATAATGAAATCT+GGG | - | chr4_1:73607286-73607305 | Msa0571110:intron | 20.0% |
| !!! | ATTTTTTTCTCTTGTTCTGA+AGG | + | chr4_1:73606230-73606249 | None:intergenic | 25.0% |
| ! | AAATTTATCTGAATCTGTGA+TGG | - | chr4_1:73606332-73606351 | Msa0571110:intron | 25.0% |
| !!! | AGTTTTTTTCTCTTCTTCTT+TGG | + | chr4_1:73606948-73606967 | None:intergenic | 25.0% |
| !! | TTTTCATCACTGAAAATTTG+AGG | + | chr4_1:73607184-73607203 | None:intergenic | 25.0% |
| ! | GGTAATGATAAGGTTAATAT+TGG | - | chr4_1:73607235-73607254 | Msa0571110:intron | 25.0% |
| !!! | ATTTTTTTCTCTTGTTCTGA+AGG | + | chr4_1:73606230-73606249 | None:intergenic | 25.0% |
| ! | AAATTTATCTGAATCTGTGA+TGG | - | chr4_1:73606332-73606351 | Msa0571110:intron | 25.0% |
| !!! | AGTTTTTTTCTCTTCTTCTT+TGG | + | chr4_1:73606948-73606967 | None:intergenic | 25.0% |
| !! | TTTTCATCACTGAAAATTTG+AGG | + | chr4_1:73607184-73607203 | None:intergenic | 25.0% |
| ! | GGTAATGATAAGGTTAATAT+TGG | - | chr4_1:73607235-73607254 | Msa0571110:intron | 25.0% |
| TTCTTCTCTTCTTCTTTCTT+CGG | + | chr4_1:73605842-73605861 | None:intergenic | 30.0% | |
| AAGACTTTAAGCACAATTTC+TGG | + | chr4_1:73605929-73605948 | None:intergenic | 30.0% | |
| !!! | TTGTTTGTGATGGATTTTTC+AGG | - | chr4_1:73606065-73606084 | Msa0571110:CDS | 30.0% |
| !!! | TGTTTGTGATGGATTTTTCA+GGG | - | chr4_1:73606066-73606085 | Msa0571110:CDS | 30.0% |
| AGAATCACTATCATAACCTT+AGG | + | chr4_1:73606394-73606413 | None:intergenic | 30.0% | |
| !! | TCACTTTTATTTCACTCACT+TGG | - | chr4_1:73606524-73606543 | Msa0571110:CDS | 30.0% |
| TTTATTTCACTCACTTGGTT+TGG | - | chr4_1:73606529-73606548 | Msa0571110:CDS | 30.0% | |
| AAATCTGACAAATTCCTGAA+AGG | + | chr4_1:73606574-73606593 | None:intergenic | 30.0% | |
| GAATATGTTTACAAGAGAAC+TGG | - | chr4_1:73606866-73606885 | Msa0571110:CDS | 30.0% | |
| !!! | TTTGGATGTTCTTTTTTCTC+TGG | + | chr4_1:73606920-73606939 | None:intergenic | 30.0% |
| !! | TCTTCTTCTTTGGTTTCTTT+TGG | + | chr4_1:73606938-73606957 | None:intergenic | 30.0% |
| AGAAGAAGAGAAAAAAACTG+AGG | - | chr4_1:73606949-73606968 | Msa0571110:intron | 30.0% | |
| AAGGTGAAAAAGATCAGAAA+GGG | - | chr4_1:73606972-73606991 | Msa0571110:intron | 30.0% | |
| !!! | TATTTTAATCCACCAAGGTA+TGG | - | chr4_1:73607121-73607140 | Msa0571110:CDS | 30.0% |
| TACATGATAGAACAAGCATT+TGG | + | chr4_1:73607208-73607227 | None:intergenic | 30.0% | |
| !!! | ATTACACTTTTTCTACTGCA+GGG | + | chr4_1:73607353-73607372 | None:intergenic | 30.0% |
| TTCTTCTCTTCTTCTTTCTT+CGG | + | chr4_1:73605842-73605861 | None:intergenic | 30.0% | |
| AAGACTTTAAGCACAATTTC+TGG | + | chr4_1:73605929-73605948 | None:intergenic | 30.0% | |
| !!! | TTGTTTGTGATGGATTTTTC+AGG | - | chr4_1:73606065-73606084 | Msa0571110:CDS | 30.0% |
| !!! | TGTTTGTGATGGATTTTTCA+GGG | - | chr4_1:73606066-73606085 | Msa0571110:CDS | 30.0% |
| AGAATCACTATCATAACCTT+AGG | + | chr4_1:73606394-73606413 | None:intergenic | 30.0% | |
| !! | TCACTTTTATTTCACTCACT+TGG | - | chr4_1:73606524-73606543 | Msa0571110:CDS | 30.0% |
| TTTATTTCACTCACTTGGTT+TGG | - | chr4_1:73606529-73606548 | Msa0571110:CDS | 30.0% | |
| AAATCTGACAAATTCCTGAA+AGG | + | chr4_1:73606574-73606593 | None:intergenic | 30.0% | |
| GAATATGTTTACAAGAGAAC+TGG | - | chr4_1:73606866-73606885 | Msa0571110:CDS | 30.0% | |
| !!! | TTTGGATGTTCTTTTTTCTC+TGG | + | chr4_1:73606920-73606939 | None:intergenic | 30.0% |
| !! | TCTTCTTCTTTGGTTTCTTT+TGG | + | chr4_1:73606938-73606957 | None:intergenic | 30.0% |
| AGAAGAAGAGAAAAAAACTG+AGG | - | chr4_1:73606949-73606968 | Msa0571110:intron | 30.0% | |
| AAGGTGAAAAAGATCAGAAA+GGG | - | chr4_1:73606972-73606991 | Msa0571110:intron | 30.0% | |
| !!! | TATTTTAATCCACCAAGGTA+TGG | - | chr4_1:73607121-73607140 | Msa0571110:CDS | 30.0% |
| TACATGATAGAACAAGCATT+TGG | + | chr4_1:73607208-73607227 | None:intergenic | 30.0% | |
| !!! | ATTACACTTTTTCTACTGCA+GGG | + | chr4_1:73607353-73607372 | None:intergenic | 30.0% |
| ATAGGAAGAAAAGAAACCTG+AGG | - | chr4_1:73605781-73605800 | Msa0571110:CDS | 35.0% | |
| !!! | GGTTTTTTCTCTTCTTCTGT+CGG | + | chr4_1:73605881-73605900 | None:intergenic | 35.0% |
| GACAGAAGAAGAGAAAAAAC+CGG | - | chr4_1:73605880-73605899 | Msa0571110:CDS | 35.0% | |
| ! | ACTTTAAGCACAATTTCTGG+CGG | + | chr4_1:73605926-73605945 | None:intergenic | 35.0% |
| AAAGTCTTCATGCATTGTGA+AGG | - | chr4_1:73605941-73605960 | Msa0571110:CDS | 35.0% | |
| !!! | GTTTGTGATGGATTTTTCAG+GGG | - | chr4_1:73606067-73606086 | Msa0571110:CDS | 35.0% |
| ! | TACTGATTGCAAATCTCACA+AGG | - | chr4_1:73606103-73606122 | Msa0571110:CDS | 35.0% |
| ! | TCTCACAAGGTTGTTGTTAA+AGG | - | chr4_1:73606116-73606135 | Msa0571110:CDS | 35.0% |
| ! | GGTTGTTGTTAAAGGAGAAA+AGG | - | chr4_1:73606124-73606143 | Msa0571110:CDS | 35.0% |
| TGTTGTTAAAGGAGAAAAGG+CGG | - | chr4_1:73606127-73606146 | Msa0571110:CDS | 35.0% | |
| ! | ACTCTTTCAAGTACCTTCAA+TGG | + | chr4_1:73606155-73606174 | None:intergenic | 35.0% |
| !!! | TTTTTCTCTTGTTCTGAAGG+TGG | + | chr4_1:73606227-73606246 | None:intergenic | 35.0% |
| TTATTATATGGTGCAGCCTA+AGG | - | chr4_1:73606375-73606394 | Msa0571110:intron | 35.0% | |
| AGACGCATTGAGAAAATCAA+AGG | - | chr4_1:73606457-73606476 | Msa0571110:intron | 35.0% | |
| TGACAAATTCCTGAAAGGAT+GGG | + | chr4_1:73606569-73606588 | None:intergenic | 35.0% | |
| ACTAATGAGTTCTTCAGATC+CGG | + | chr4_1:73606809-73606828 | None:intergenic | 35.0% | |
| AACTCATTAGTGACAGTGAA+AGG | - | chr4_1:73606818-73606837 | Msa0571110:CDS | 35.0% | |
| GAAGAGAAAAAAACTGAGGA+AGG | - | chr4_1:73606953-73606972 | Msa0571110:intron | 35.0% | |
| GAAGGTGAAAAAGATCAGAA+AGG | - | chr4_1:73606971-73606990 | Msa0571110:intron | 35.0% | |
| CATCACTGAAAATTTGAGGA+GGG | + | chr4_1:73607180-73607199 | None:intergenic | 35.0% | |
| TCATCACTGAAAATTTGAGG+AGG | + | chr4_1:73607181-73607200 | None:intergenic | 35.0% | |
| !!! | GATTACACTTTTTCTACTGC+AGG | + | chr4_1:73607354-73607373 | None:intergenic | 35.0% |
| ATAGGAAGAAAAGAAACCTG+AGG | - | chr4_1:73605781-73605800 | Msa0571110:CDS | 35.0% | |
| !!! | GGTTTTTTCTCTTCTTCTGT+CGG | + | chr4_1:73605881-73605900 | None:intergenic | 35.0% |
| GACAGAAGAAGAGAAAAAAC+CGG | - | chr4_1:73605880-73605899 | Msa0571110:CDS | 35.0% | |
| ! | ACTTTAAGCACAATTTCTGG+CGG | + | chr4_1:73605926-73605945 | None:intergenic | 35.0% |
| AAAGTCTTCATGCATTGTGA+AGG | - | chr4_1:73605941-73605960 | Msa0571110:CDS | 35.0% | |
| !!! | GTTTGTGATGGATTTTTCAG+GGG | - | chr4_1:73606067-73606086 | Msa0571110:CDS | 35.0% |
| ! | TACTGATTGCAAATCTCACA+AGG | - | chr4_1:73606103-73606122 | Msa0571110:CDS | 35.0% |
| ! | TCTCACAAGGTTGTTGTTAA+AGG | - | chr4_1:73606116-73606135 | Msa0571110:CDS | 35.0% |
| ! | GGTTGTTGTTAAAGGAGAAA+AGG | - | chr4_1:73606124-73606143 | Msa0571110:CDS | 35.0% |
| TGTTGTTAAAGGAGAAAAGG+CGG | - | chr4_1:73606127-73606146 | Msa0571110:CDS | 35.0% | |
| ! | ACTCTTTCAAGTACCTTCAA+TGG | + | chr4_1:73606155-73606174 | None:intergenic | 35.0% |
| !!! | TTTTTCTCTTGTTCTGAAGG+TGG | + | chr4_1:73606227-73606246 | None:intergenic | 35.0% |
| TTATTATATGGTGCAGCCTA+AGG | - | chr4_1:73606375-73606394 | Msa0571110:intron | 35.0% | |
| AGACGCATTGAGAAAATCAA+AGG | - | chr4_1:73606457-73606476 | Msa0571110:intron | 35.0% | |
| TGACAAATTCCTGAAAGGAT+GGG | + | chr4_1:73606569-73606588 | None:intergenic | 35.0% | |
| ACTAATGAGTTCTTCAGATC+CGG | + | chr4_1:73606809-73606828 | None:intergenic | 35.0% | |
| AACTCATTAGTGACAGTGAA+AGG | - | chr4_1:73606818-73606837 | Msa0571110:CDS | 35.0% | |
| GAAGAGAAAAAAACTGAGGA+AGG | - | chr4_1:73606953-73606972 | Msa0571110:intron | 35.0% | |
| GAAGGTGAAAAAGATCAGAA+AGG | - | chr4_1:73606971-73606990 | Msa0571110:intron | 35.0% | |
| CATCACTGAAAATTTGAGGA+GGG | + | chr4_1:73607180-73607199 | None:intergenic | 35.0% | |
| TCATCACTGAAAATTTGAGG+AGG | + | chr4_1:73607181-73607200 | None:intergenic | 35.0% | |
| !!! | GATTACACTTTTTCTACTGC+AGG | + | chr4_1:73607354-73607373 | None:intergenic | 35.0% |
| GAGAGATATAGAAGCTAGGT+TGG | + | chr4_1:73605586-73605605 | None:intergenic | 40.0% | |
| GAGAGAGAGATATAGAAGCT+AGG | + | chr4_1:73605590-73605609 | None:intergenic | 40.0% | |
| AGTCAGTCACACTAAACCAA+TGG | - | chr4_1:73605645-73605664 | Msa0571110:three_prime_UTR | 40.0% | |
| GTCAGTCACACTAAACCAAT+GGG | - | chr4_1:73605646-73605665 | Msa0571110:three_prime_UTR | 40.0% | |
| AGTAGAGGAGAAAAAACCAG+AGG | - | chr4_1:73605811-73605830 | Msa0571110:CDS | 40.0% | |
| TTCTCTTCTTCTTTCTTCGG+TGG | + | chr4_1:73605839-73605858 | None:intergenic | 40.0% | |
| ! | TTTTTCTCTTCTTCTGTCGG+TGG | + | chr4_1:73605878-73605897 | None:intergenic | 40.0% |
| AGAAGAAGAGAAAAAACCGG+AGG | - | chr4_1:73605883-73605902 | Msa0571110:CDS | 40.0% | |
| GAAAAAACCGGAGGAATCTA+AGG | - | chr4_1:73605892-73605911 | Msa0571110:CDS | 40.0% | |
| GTAACTTCCTTAGATTCCTC+CGG | + | chr4_1:73605902-73605921 | None:intergenic | 40.0% | |
| AAAGTTCGTCGTTCACTCAA+AGG | - | chr4_1:73605974-73605993 | Msa0571110:CDS | 40.0% | |
| AAAGGCAAAAACTCTTCACC+TGG | + | chr4_1:73606004-73606023 | None:intergenic | 40.0% | |
| AGGTACTTGAAAGAGTTCAG+AGG | - | chr4_1:73606159-73606178 | Msa0571110:CDS | 40.0% | |
| !!! | CTTGTTCTGAAGGTGGTTTT+GGG | + | chr4_1:73606220-73606239 | None:intergenic | 40.0% |
| !!! | TCTTGTTCTGAAGGTGGTTT+TGG | + | chr4_1:73606221-73606240 | None:intergenic | 40.0% |
| ! | TTCTTTTCTTCCTGTGGCTT+AGG | + | chr4_1:73606269-73606288 | None:intergenic | 40.0% |
| ! | TCAGCTTTCTTTTCTTCCTG+TGG | + | chr4_1:73606275-73606294 | None:intergenic | 40.0% |
| GGAAGAAAAGAAAGCTGAAG+AGG | - | chr4_1:73606277-73606296 | Msa0571110:intron | 40.0% | |
| !! | CTTGGTTTGGTTCAATTCTC+AGG | - | chr4_1:73606542-73606561 | Msa0571110:CDS | 40.0% |
| CTGACAAATTCCTGAAAGGA+TGG | + | chr4_1:73606570-73606589 | None:intergenic | 40.0% | |
| GAAAAAGATCAGAAAGGGAG+TGG | - | chr4_1:73606977-73606996 | Msa0571110:intron | 40.0% | |
| TAATCCACCAAGGTATGGTA+CGG | - | chr4_1:73607126-73607145 | Msa0571110:CDS | 40.0% | |
| TAAAACTCCGTACCATACCT+TGG | + | chr4_1:73607136-73607155 | None:intergenic | 40.0% | |
| !! | ACGGAGTTTTATGCATATCC+TGG | - | chr4_1:73607145-73607164 | Msa0571110:CDS | 40.0% |
| AAAATTTGAGGAGGGTAAGC+TGG | + | chr4_1:73607172-73607191 | None:intergenic | 40.0% | |
| ! | ACTGCAGGGAAAAGTACATA+GGG | + | chr4_1:73607339-73607358 | None:intergenic | 40.0% |
| ! | TACTGCAGGGAAAAGTACAT+AGG | + | chr4_1:73607340-73607359 | None:intergenic | 40.0% |
| GAGAGATATAGAAGCTAGGT+TGG | + | chr4_1:73605586-73605605 | None:intergenic | 40.0% | |
| GAGAGAGAGATATAGAAGCT+AGG | + | chr4_1:73605590-73605609 | None:intergenic | 40.0% | |
| AGTCAGTCACACTAAACCAA+TGG | - | chr4_1:73605645-73605664 | Msa0571110:three_prime_UTR | 40.0% | |
| GTCAGTCACACTAAACCAAT+GGG | - | chr4_1:73605646-73605665 | Msa0571110:three_prime_UTR | 40.0% | |
| AGTAGAGGAGAAAAAACCAG+AGG | - | chr4_1:73605811-73605830 | Msa0571110:CDS | 40.0% | |
| TTCTCTTCTTCTTTCTTCGG+TGG | + | chr4_1:73605839-73605858 | None:intergenic | 40.0% | |
| ! | TTTTTCTCTTCTTCTGTCGG+TGG | + | chr4_1:73605878-73605897 | None:intergenic | 40.0% |
| AGAAGAAGAGAAAAAACCGG+AGG | - | chr4_1:73605883-73605902 | Msa0571110:CDS | 40.0% | |
| GAAAAAACCGGAGGAATCTA+AGG | - | chr4_1:73605892-73605911 | Msa0571110:CDS | 40.0% | |
| GTAACTTCCTTAGATTCCTC+CGG | + | chr4_1:73605902-73605921 | None:intergenic | 40.0% | |
| AAAGTTCGTCGTTCACTCAA+AGG | - | chr4_1:73605974-73605993 | Msa0571110:CDS | 40.0% | |
| AAAGGCAAAAACTCTTCACC+TGG | + | chr4_1:73606004-73606023 | None:intergenic | 40.0% | |
| AGGTACTTGAAAGAGTTCAG+AGG | - | chr4_1:73606159-73606178 | Msa0571110:CDS | 40.0% | |
| !!! | CTTGTTCTGAAGGTGGTTTT+GGG | + | chr4_1:73606220-73606239 | None:intergenic | 40.0% |
| !!! | TCTTGTTCTGAAGGTGGTTT+TGG | + | chr4_1:73606221-73606240 | None:intergenic | 40.0% |
| ! | TTCTTTTCTTCCTGTGGCTT+AGG | + | chr4_1:73606269-73606288 | None:intergenic | 40.0% |
| ! | TCAGCTTTCTTTTCTTCCTG+TGG | + | chr4_1:73606275-73606294 | None:intergenic | 40.0% |
| GGAAGAAAAGAAAGCTGAAG+AGG | - | chr4_1:73606277-73606296 | Msa0571110:intron | 40.0% | |
| !! | CTTGGTTTGGTTCAATTCTC+AGG | - | chr4_1:73606542-73606561 | Msa0571110:CDS | 40.0% |
| CTGACAAATTCCTGAAAGGA+TGG | + | chr4_1:73606570-73606589 | None:intergenic | 40.0% | |
| GAAAAAGATCAGAAAGGGAG+TGG | - | chr4_1:73606977-73606996 | Msa0571110:intron | 40.0% | |
| TAATCCACCAAGGTATGGTA+CGG | - | chr4_1:73607126-73607145 | Msa0571110:CDS | 40.0% | |
| TAAAACTCCGTACCATACCT+TGG | + | chr4_1:73607136-73607155 | None:intergenic | 40.0% | |
| !! | ACGGAGTTTTATGCATATCC+TGG | - | chr4_1:73607145-73607164 | Msa0571110:CDS | 40.0% |
| AAAATTTGAGGAGGGTAAGC+TGG | + | chr4_1:73607172-73607191 | None:intergenic | 40.0% | |
| ! | ACTGCAGGGAAAAGTACATA+GGG | + | chr4_1:73607339-73607358 | None:intergenic | 40.0% |
| ! | TACTGCAGGGAAAAGTACAT+AGG | + | chr4_1:73607340-73607359 | None:intergenic | 40.0% |
| !! | TAGAAGCTAGGTTGGTTCTG+CGG | + | chr4_1:73605578-73605597 | None:intergenic | 45.0% |
| ! | AGTGTGACTGACTGACTCAA+AGG | + | chr4_1:73605638-73605657 | None:intergenic | 45.0% |
| TCACACTAAACCAATGGGAG+AGG | - | chr4_1:73605651-73605670 | Msa0571110:three_prime_UTR | 45.0% | |
| ACTAAACCAATGGGAGAGGT+TGG | - | chr4_1:73605655-73605674 | Msa0571110:three_prime_UTR | 45.0% | |
| ACCTGAGGAAACGAAAGTAG+AGG | - | chr4_1:73605796-73605815 | Msa0571110:CDS | 45.0% | |
| TCCTCTACTTTCGTTTCCTC+AGG | + | chr4_1:73605800-73605819 | None:intergenic | 45.0% | |
| ! | CGTTCACTCAAAGGTTTTCC+AGG | - | chr4_1:73605983-73606002 | Msa0571110:CDS | 45.0% |
| AGAAAAGGCGGATCCATTGA+AGG | - | chr4_1:73606139-73606158 | Msa0571110:CDS | 45.0% | |
| !!! | TCTGAAGGTGGTTTTGGGAT+CGG | + | chr4_1:73606215-73606234 | None:intergenic | 45.0% |
| GAAAGAGAAACCTAAGCCAC+AGG | - | chr4_1:73606256-73606275 | Msa0571110:intron | 45.0% | |
| AGGAGTTGAATCAGCTGAAC+CGG | - | chr4_1:73606787-73606806 | Msa0571110:CDS | 45.0% | |
| GATGGAAAACCAAGTGGTGA+TGG | - | chr4_1:73607046-73607065 | Msa0571110:CDS | 45.0% | |
| AGGTGGTGCAGAAGAAGTTA+AGG | - | chr4_1:73607072-73607091 | Msa0571110:CDS | 45.0% | |
| TGGTGCAGAAGAAGTTAAGG+TGG | - | chr4_1:73607075-73607094 | Msa0571110:CDS | 45.0% | |
| TGCAGAAGAAGTTAAGGTGG+TGG | - | chr4_1:73607078-73607097 | Msa0571110:CDS | 45.0% | |
| !! | TAGAAGCTAGGTTGGTTCTG+CGG | + | chr4_1:73605578-73605597 | None:intergenic | 45.0% |
| ! | AGTGTGACTGACTGACTCAA+AGG | + | chr4_1:73605638-73605657 | None:intergenic | 45.0% |
| TCACACTAAACCAATGGGAG+AGG | - | chr4_1:73605651-73605670 | Msa0571110:three_prime_UTR | 45.0% | |
| ACTAAACCAATGGGAGAGGT+TGG | - | chr4_1:73605655-73605674 | Msa0571110:three_prime_UTR | 45.0% | |
| ACCTGAGGAAACGAAAGTAG+AGG | - | chr4_1:73605796-73605815 | Msa0571110:CDS | 45.0% | |
| TCCTCTACTTTCGTTTCCTC+AGG | + | chr4_1:73605800-73605819 | None:intergenic | 45.0% | |
| ! | CGTTCACTCAAAGGTTTTCC+AGG | - | chr4_1:73605983-73606002 | Msa0571110:CDS | 45.0% |
| AGAAAAGGCGGATCCATTGA+AGG | - | chr4_1:73606139-73606158 | Msa0571110:CDS | 45.0% | |
| !!! | TCTGAAGGTGGTTTTGGGAT+CGG | + | chr4_1:73606215-73606234 | None:intergenic | 45.0% |
| GAAAGAGAAACCTAAGCCAC+AGG | - | chr4_1:73606256-73606275 | Msa0571110:intron | 45.0% | |
| AGGAGTTGAATCAGCTGAAC+CGG | - | chr4_1:73606787-73606806 | Msa0571110:CDS | 45.0% | |
| GATGGAAAACCAAGTGGTGA+TGG | - | chr4_1:73607046-73607065 | Msa0571110:CDS | 45.0% | |
| AGGTGGTGCAGAAGAAGTTA+AGG | - | chr4_1:73607072-73607091 | Msa0571110:CDS | 45.0% | |
| TGGTGCAGAAGAAGTTAAGG+TGG | - | chr4_1:73607075-73607094 | Msa0571110:CDS | 45.0% | |
| TGCAGAAGAAGTTAAGGTGG+TGG | - | chr4_1:73607078-73607097 | Msa0571110:CDS | 45.0% | |
| !!! | ATCATTTTTATTTTATTATA+TGG | - | chr4_1:73606363-73606382 | Msa0571110:intron | 5.0% |
| !!! | AGTTAAAATATTTTATAATA+AGG | + | chr4_1:73606680-73606699 | None:intergenic | 5.0% |
| !!! | ATCATTTTTATTTTATTATA+TGG | - | chr4_1:73606363-73606382 | Msa0571110:intron | 5.0% |
| !!! | AGTTAAAATATTTTATAATA+AGG | + | chr4_1:73606680-73606699 | None:intergenic | 5.0% |
| AGAGAACCAACCTCTCCCAT+TGG | + | chr4_1:73605664-73605683 | None:intergenic | 50.0% | |
| TCTTTCTTCGGTGGTTCCTC+TGG | + | chr4_1:73605830-73605849 | None:intergenic | 50.0% | |
| TTCTCAGGTCCCATCCTTTC+AGG | - | chr4_1:73606557-73606576 | Msa0571110:CDS | 50.0% | |
| AAGTGGTCCTGCAAGTGCAA+AGG | - | chr4_1:73606715-73606734 | Msa0571110:CDS | 50.0% | |
| AGTGGTCCTGCAAGTGCAAA+GGG | - | chr4_1:73606716-73606735 | Msa0571110:CDS | 50.0% | |
| GATCAGAAAGGGAGTGGTGA+AGG | - | chr4_1:73606983-73607002 | Msa0571110:intron | 50.0% | |
| GAGGGAGATGGAAAACCAAG+TGG | - | chr4_1:73607040-73607059 | Msa0571110:CDS | 50.0% | |
| !! | GGAAAACCAAGTGGTGATGG+AGG | - | chr4_1:73607049-73607068 | Msa0571110:CDS | 50.0% |
| !! | AAACCAAGTGGTGATGGAGG+AGG | - | chr4_1:73607052-73607071 | Msa0571110:CDS | 50.0% |
| AACTCCGTACCATACCTTGG+TGG | + | chr4_1:73607133-73607152 | None:intergenic | 50.0% | |
| TCTGGGTGAAAGCCATATCC+TGG | - | chr4_1:73607303-73607322 | Msa0571110:intron | 50.0% | |
| CTGGGTGAAAGCCATATCCT+GGG | - | chr4_1:73607304-73607323 | Msa0571110:intron | 50.0% | |
| GGCACATCTTACCCAGGATA+TGG | + | chr4_1:73607318-73607337 | None:intergenic | 50.0% | |
| ACATAGGGCACATCTTACCC+AGG | + | chr4_1:73607324-73607343 | None:intergenic | 50.0% | |
| AGAGAACCAACCTCTCCCAT+TGG | + | chr4_1:73605664-73605683 | None:intergenic | 50.0% | |
| TCTTTCTTCGGTGGTTCCTC+TGG | + | chr4_1:73605830-73605849 | None:intergenic | 50.0% | |
| TTCTCAGGTCCCATCCTTTC+AGG | - | chr4_1:73606557-73606576 | Msa0571110:CDS | 50.0% | |
| AAGTGGTCCTGCAAGTGCAA+AGG | - | chr4_1:73606715-73606734 | Msa0571110:CDS | 50.0% | |
| AGTGGTCCTGCAAGTGCAAA+GGG | - | chr4_1:73606716-73606735 | Msa0571110:CDS | 50.0% | |
| GATCAGAAAGGGAGTGGTGA+AGG | - | chr4_1:73606983-73607002 | Msa0571110:intron | 50.0% | |
| GAGGGAGATGGAAAACCAAG+TGG | - | chr4_1:73607040-73607059 | Msa0571110:CDS | 50.0% | |
| !! | GGAAAACCAAGTGGTGATGG+AGG | - | chr4_1:73607049-73607068 | Msa0571110:CDS | 50.0% |
| !! | AAACCAAGTGGTGATGGAGG+AGG | - | chr4_1:73607052-73607071 | Msa0571110:CDS | 50.0% |
| AACTCCGTACCATACCTTGG+TGG | + | chr4_1:73607133-73607152 | None:intergenic | 50.0% | |
| TCTGGGTGAAAGCCATATCC+TGG | - | chr4_1:73607303-73607322 | Msa0571110:intron | 50.0% | |
| CTGGGTGAAAGCCATATCCT+GGG | - | chr4_1:73607304-73607323 | Msa0571110:intron | 50.0% | |
| GGCACATCTTACCCAGGATA+TGG | + | chr4_1:73607318-73607337 | None:intergenic | 50.0% | |
| ACATAGGGCACATCTTACCC+AGG | + | chr4_1:73607324-73607343 | None:intergenic | 50.0% | |
| GTCACACCCTTTGCACTTGC+AGG | + | chr4_1:73606725-73606744 | None:intergenic | 55.0% | |
| GAAAGGGAGTGGTGAAGGAG+AGG | - | chr4_1:73606988-73607007 | Msa0571110:CDS | 55.0% | |
| GTCACACCCTTTGCACTTGC+AGG | + | chr4_1:73606725-73606744 | None:intergenic | 55.0% | |
| GAAAGGGAGTGGTGAAGGAG+AGG | - | chr4_1:73606988-73607007 | Msa0571110:CDS | 55.0% | |
| CCACCTCCTCCATCACCACT+TGG | + | chr4_1:73607058-73607077 | None:intergenic | 60.0% | |
| !! | CCAAGTGGTGATGGAGGAGG+TGG | - | chr4_1:73607055-73607074 | Msa0571110:CDS | 60.0% |
| TGAGGAGGGTAAGCTGGACC+AGG | + | chr4_1:73607166-73607185 | None:intergenic | 60.0% | |
| CCACCTCCTCCATCACCACT+TGG | + | chr4_1:73607058-73607077 | None:intergenic | 60.0% | |
| !! | CCAAGTGGTGATGGAGGAGG+TGG | - | chr4_1:73607055-73607074 | Msa0571110:CDS | 60.0% |
| TGAGGAGGGTAAGCTGGACC+AGG | + | chr4_1:73607166-73607185 | None:intergenic | 60.0% | |
| AGCTGCAGCTGCAGCTGCAG+AGG | - | chr4_1:73607021-73607040 | Msa0571110:CDS | 65.0% | |
| GCTGCAGCTGCAGCTGCAGA+GGG | - | chr4_1:73607022-73607041 | Msa0571110:CDS | 65.0% | |
| GCTGCAGCTGCAGAGGGAGA+TGG | - | chr4_1:73607028-73607047 | Msa0571110:CDS | 65.0% | |
| AGCTGCAGCTGCAGCTGCAG+AGG | - | chr4_1:73607021-73607040 | Msa0571110:CDS | 65.0% | |
| GCTGCAGCTGCAGCTGCAGA+GGG | - | chr4_1:73607022-73607041 | Msa0571110:CDS | 65.0% | |
| GCTGCAGCTGCAGAGGGAGA+TGG | - | chr4_1:73607028-73607047 | Msa0571110:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 73605501 | 73607489 | 73605501 | ID=Msa0571110;Name=Msa0571110 |
| chr4_1 | mRNA | 73605501 | 73607489 | 73605501 | ID=Msa0571110-mRNA-1;Parent=Msa0571110;Name=Msa0571110-mRNA-1;_AED=0.09;_eAED=0.09;_QI=163|1|1|1|1|1|5|261|322 |
| chr4_1 | exon | 73605501 | 73606201 | 73605501 | ID=Msa0571110-mRNA-1:exon:25270;Parent=Msa0571110-mRNA-1 |
| chr4_1 | exon | 73606512 | 73606599 | 73606512 | ID=Msa0571110-mRNA-1:exon:25269;Parent=Msa0571110-mRNA-1 |
| chr4_1 | exon | 73606692 | 73606903 | 73606692 | ID=Msa0571110-mRNA-1:exon:25268;Parent=Msa0571110-mRNA-1 |
| chr4_1 | exon | 73606986 | 73607205 | 73606986 | ID=Msa0571110-mRNA-1:exon:25267;Parent=Msa0571110-mRNA-1 |
| chr4_1 | exon | 73607318 | 73607489 | 73607318 | ID=Msa0571110-mRNA-1:exon:25266;Parent=Msa0571110-mRNA-1 |
| chr4_1 | five_prime_UTR | 73607327 | 73607489 | 73607327 | ID=Msa0571110-mRNA-1:five_prime_utr;Parent=Msa0571110-mRNA-1 |
| chr4_1 | CDS | 73607318 | 73607326 | 73607318 | ID=Msa0571110-mRNA-1:cds;Parent=Msa0571110-mRNA-1 |
| chr4_1 | CDS | 73606986 | 73607205 | 73606986 | ID=Msa0571110-mRNA-1:cds;Parent=Msa0571110-mRNA-1 |
| chr4_1 | CDS | 73606692 | 73606903 | 73606692 | ID=Msa0571110-mRNA-1:cds;Parent=Msa0571110-mRNA-1 |
| chr4_1 | CDS | 73606512 | 73606599 | 73606512 | ID=Msa0571110-mRNA-1:cds;Parent=Msa0571110-mRNA-1 |
| chr4_1 | CDS | 73605762 | 73606201 | 73605762 | ID=Msa0571110-mRNA-1:cds;Parent=Msa0571110-mRNA-1 |
| chr4_1 | three_prime_UTR | 73605501 | 73605761 | 73605501 | ID=Msa0571110-mRNA-1:three_prime_utr;Parent=Msa0571110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
