Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0620200 | XP_013446985.1 | 93.818 | 275 | 16 | 1 | 48 | 322 | 48 | 321 | 1.05e-141 | 413 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0620200 | sp|Q9C5D3|HIP7_ARATH | 58.451 | 284 | 103 | 4 | 52 | 322 | 74 | 355 | 2.97e-76 | 240 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0620200 | 0.811923 | 5.490274e-51 | -8.615850e-47 |
| Msa0076040 | Msa0620200 | 0.844863 | 5.806758e-59 | -8.615850e-47 |
| Msa0096800 | Msa0620200 | 0.971103 | 1.222250e-132 | -8.615850e-47 |
| Msa0620200 | Msa0697080 | 0.800131 | 1.664357e-48 | -8.615850e-47 |
| Msa0620200 | Msa0880450 | 0.804715 | 1.890694e-49 | -8.615850e-47 |
| Msa0620200 | Msa0880470 | 0.976097 | 3.533767e-141 | -8.615850e-47 |
| Msa0620200 | Msa1130980 | 0.806882 | 6.628538e-50 | -8.615850e-47 |
| Msa0620200 | Msa1174530 | 0.801649 | 8.151275e-49 | -8.615850e-47 |
| Msa0620200 | Msa1235250 | 0.811753 | 5.978932e-51 | -8.615850e-47 |
| Msa0620200 | Msa1251160 | 0.818493 | 1.904612e-52 | -8.615850e-47 |
| Msa0620200 | Msa1413260 | 0.824323 | 8.588524e-54 | -8.615850e-47 |
| Msa0620200 | Msa1418340 | 0.809487 | 1.847197e-50 | -8.615850e-47 |
| Msa0620200 | Msa1425670 | 0.812718 | 3.681411e-51 | -8.615850e-47 |
| Msa0620200 | Msa1443930 | 0.802553 | 5.311130e-49 | -8.615850e-47 |
| Msa0620200 | Msa1446820 | 0.812563 | 3.980291e-51 | -8.615850e-47 |
| Msa0134610 | Msa0620200 | 0.806334 | 8.650115e-50 | -8.615850e-47 |
| Msa0181610 | Msa0620200 | 0.838891 | 2.195748e-57 | -8.615850e-47 |
| Msa0223080 | Msa0620200 | 0.805680 | 1.187327e-49 | -8.615850e-47 |
| Msa0470530 | Msa0620200 | 0.804592 | 2.006272e-49 | -8.615850e-47 |
| Msa0477460 | Msa0620200 | 0.813733 | 2.204324e-51 | -8.615850e-47 |
| Msa0296250 | Msa0620200 | 0.801912 | 7.197333e-49 | -8.615850e-47 |
| Msa0302160 | Msa0620200 | 0.809538 | 1.800618e-50 | -8.615850e-47 |
| Msa0315980 | Msa0620200 | 0.803393 | 3.562481e-49 | -8.615850e-47 |
| Msa0339490 | Msa0620200 | 0.812648 | 3.814631e-51 | -8.615850e-47 |
| Msa0524500 | Msa0620200 | 0.811749 | 5.990265e-51 | -8.615850e-47 |
| Msa0571110 | Msa0620200 | 0.824300 | 8.695657e-54 | -8.615850e-47 |
| Msa0580280 | Msa0620200 | 0.815179 | 1.055548e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0620200 | MtrunA17_Chr8g0386231 | 93.818 | 275 | 16 | 1 | 48 | 322 | 48 | 321 | 9.64e-146 | 413 |
| Msa0620200 | MtrunA17_Chr3g0132051 | 53.506 | 271 | 87 | 6 | 52 | 322 | 35 | 266 | 1.23e-79 | 243 |
| Msa0620200 | MtrunA17_Chr3g0132061 | 51.736 | 288 | 102 | 4 | 52 | 322 | 35 | 302 | 1.79e-76 | 236 |
| Msa0620200 | MtrunA17_Chr2g0290471 | 49.084 | 273 | 103 | 6 | 50 | 322 | 33 | 269 | 2.57e-53 | 176 |
| Msa0620200 | MtrunA17_Chr4g0001151 | 68.000 | 125 | 37 | 1 | 52 | 176 | 169 | 290 | 5.56e-48 | 163 |
| Msa0620200 | MtrunA17_Chr3g0094841 | 35.531 | 273 | 110 | 6 | 53 | 322 | 28 | 237 | 1.74e-41 | 144 |
| Msa0620200 | MtrunA17_Chr3g0128091 | 35.897 | 312 | 157 | 11 | 19 | 321 | 6 | 283 | 4.01e-33 | 123 |
| Msa0620200 | MtrunA17_Chr4g0028461 | 30.686 | 277 | 163 | 5 | 54 | 322 | 69 | 324 | 1.38e-30 | 117 |
| Msa0620200 | MtrunA17_Chr1g0180631 | 31.742 | 356 | 159 | 11 | 26 | 322 | 3 | 333 | 2.37e-29 | 114 |
| Msa0620200 | MtrunA17_Chr5g0429111 | 36.810 | 163 | 91 | 2 | 54 | 216 | 56 | 206 | 1.26e-28 | 112 |
| Msa0620200 | MtrunA17_Chr8g0337951 | 34.386 | 285 | 149 | 11 | 37 | 321 | 18 | 264 | 8.22e-28 | 108 |
| Msa0620200 | MtrunA17_Chr2g0327311 | 33.526 | 173 | 105 | 4 | 50 | 216 | 64 | 232 | 6.58e-24 | 100 |
| Msa0620200 | MtrunA17_Chr7g0264601 | 34.343 | 198 | 100 | 3 | 43 | 217 | 5 | 195 | 1.05e-21 | 94.0 |
| Msa0620200 | MtrunA17_Chr8g0343041 | 50.000 | 62 | 31 | 0 | 155 | 216 | 77 | 138 | 2.24e-14 | 72.4 |
| Msa0620200 | MtrunA17_Chr6g0454851 | 50.746 | 67 | 32 | 1 | 50 | 116 | 17 | 82 | 2.19e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0620200 | AT5G50740.5 | 50.323 | 310 | 127 | 5 | 13 | 322 | 1 | 283 | 1.41e-82 | 251 |
| Msa0620200 | AT5G50740.1 | 50.323 | 310 | 127 | 5 | 13 | 322 | 1 | 283 | 1.41e-82 | 251 |
| Msa0620200 | AT5G63530.2 | 58.451 | 284 | 103 | 4 | 52 | 322 | 59 | 340 | 1.87e-77 | 240 |
| Msa0620200 | AT5G50740.3 | 49.689 | 322 | 130 | 5 | 1 | 322 | 1 | 290 | 2.45e-77 | 238 |
| Msa0620200 | AT5G63530.1 | 58.451 | 284 | 103 | 4 | 52 | 322 | 74 | 355 | 3.02e-77 | 240 |
| Msa0620200 | AT3G02960.1 | 39.114 | 271 | 104 | 6 | 52 | 322 | 37 | 246 | 3.08e-50 | 167 |
| Msa0620200 | AT5G50740.2 | 55.758 | 165 | 58 | 2 | 13 | 177 | 1 | 150 | 4.78e-45 | 151 |
| Msa0620200 | AT5G50740.4 | 51.412 | 177 | 66 | 3 | 1 | 177 | 1 | 157 | 5.62e-40 | 138 |
| Msa0620200 | AT5G24580.2 | 33.333 | 282 | 154 | 6 | 53 | 321 | 57 | 317 | 3.99e-32 | 122 |
| Msa0620200 | AT5G24580.4 | 33.333 | 282 | 154 | 6 | 53 | 321 | 58 | 318 | 4.51e-32 | 122 |
| Msa0620200 | AT5G24580.1 | 33.333 | 282 | 154 | 6 | 53 | 321 | 58 | 318 | 4.51e-32 | 122 |
| Msa0620200 | AT5G24580.3 | 32.270 | 282 | 154 | 7 | 53 | 321 | 58 | 315 | 5.26e-29 | 114 |
| Msa0620200 | AT5G03380.1 | 35.926 | 270 | 134 | 8 | 26 | 264 | 3 | 264 | 8.82e-29 | 114 |
| Msa0620200 | AT2G36950.1 | 31.751 | 337 | 161 | 9 | 53 | 322 | 52 | 386 | 9.07e-29 | 114 |
| Msa0620200 | AT5G03380.2 | 35.270 | 241 | 121 | 6 | 55 | 264 | 1 | 237 | 5.09e-26 | 106 |
| Msa0620200 | AT5G60800.1 | 35.612 | 278 | 149 | 5 | 53 | 322 | 28 | 283 | 1.09e-22 | 95.9 |
| Msa0620200 | AT5G60800.2 | 35.252 | 278 | 150 | 5 | 53 | 322 | 28 | 283 | 1.44e-21 | 93.2 |
| Msa0620200 | AT5G24580.5 | 31.474 | 251 | 138 | 6 | 84 | 321 | 2 | 231 | 7.47e-21 | 89.7 |
| Msa0620200 | AT1G29000.1 | 33.333 | 165 | 104 | 3 | 54 | 216 | 18 | 178 | 1.95e-19 | 87.0 |
| Msa0620200 | AT1G29000.2 | 33.333 | 165 | 104 | 3 | 54 | 216 | 18 | 178 | 1.95e-19 | 87.0 |
| Msa0620200 | AT2G28090.1 | 29.907 | 214 | 136 | 3 | 36 | 247 | 14 | 215 | 2.79e-16 | 77.4 |
Find 64 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTTCTTTGGTTTCTTT+TGG | 0.148425 | 4_2:-71525393 | None:intergenic |
| AAGACTTTAAGCACAATTTC+TGG | 0.185344 | 4_2:-71524384 | None:intergenic |
| TCTTGTTCTGAAGGTGGTTT+AGG | 0.196858 | 4_2:-71524675 | None:intergenic |
| TCTCACAAGGTTGTTGTTAA+AGG | 0.201668 | 4_2:+71524573 | Msa0620200:CDS |
| GGTAATGATAAGGGTAATAT+TGG | 0.277814 | 4_2:+71525693 | Msa0620200:three_prime_UTR |
| TAAGGGTAATATTGGAATTA+TGG | 0.284369 | 4_2:+71525701 | Msa0620200:three_prime_UTR |
| CTTGTTCTGAAGGTGGTTTA+GGG | 0.292396 | 4_2:-71524674 | None:intergenic |
| TCCTCTACTTTCGTTTCCTC+TGG | 0.374047 | 4_2:-71524255 | None:intergenic |
| AGGTGGTGCAGAAGAAGTTA+AGG | 0.374215 | 4_2:+71525530 | Msa0620200:CDS |
| ATGATAATGATAATGAAATC+TGG | 0.375338 | 4_2:+71525743 | Msa0620200:three_prime_UTR |
| AGCTGCAGCTGCAGCTGCAG+AGG | 0.381633 | 4_2:+71525479 | Msa0620200:CDS |
| GGCACATCTTACCCAGGATA+TGG | 0.400133 | 4_2:-71525773 | None:intergenic |
| TACATGATAGAACAAGCATT+TGG | 0.401152 | 4_2:-71525663 | None:intergenic |
| TCTTTCTTCGGTGGTTCCTC+TGG | 0.408707 | 4_2:-71524285 | None:intergenic |
| ACTCTTTCAAGAACCTTCAA+TGG | 0.419505 | 4_2:-71524609 | None:intergenic |
| GCTGCAGCTGCAGCTGCAGA+GGG | 0.436837 | 4_2:+71525480 | Msa0620200:CDS |
| GAATATGTTTACAAGAGAAC+TGG | 0.441360 | 4_2:+71525324 | Msa0620200:CDS |
| GATCAGAAAGGGAGTGGTGA+AGG | 0.441866 | 4_2:+71525441 | Msa0620200:CDS |
| GAGAGAGATAGAAGCTAGGT+TGG | 0.445321 | 4_2:-71524038 | None:intergenic |
| AGGAGTTGAATCAGCTGAAC+CGG | 0.452591 | 4_2:+71525245 | Msa0620200:intron |
| TCTGGGTGAAAGCCATATCC+TGG | 0.459053 | 4_2:+71525761 | Msa0620200:three_prime_UTR |
| AAAATTTGAGGAGGGTAAGC+TGG | 0.466832 | 4_2:-71525627 | None:intergenic |
| GTAACTTCCTTAGATTCCTC+CGG | 0.468732 | 4_2:-71524357 | None:intergenic |
| AAAGTTCGTCGTTCACTCAA+AGG | 0.473903 | 4_2:+71524432 | Msa0620200:CDS |
| ACTAGTGAGTTCTTCAGATC+CGG | 0.476586 | 4_2:-71525264 | None:intergenic |
| CCACCTCCTCCATCACCACT+TGG | 0.479378 | 4_2:-71525513 | None:intergenic |
| GAAAGGGAGTGGTGAAGGAG+AGG | 0.503599 | 4_2:+71525446 | Msa0620200:CDS |
| GAAAGAGAAACCTAAGCCAC+AGG | 0.507799 | 4_2:+71524713 | Msa0620200:CDS |
| GATGGAAAACCAAGTGGTGA+TGG | 0.509668 | 4_2:+71525504 | Msa0620200:CDS |
| TGCAGAAGAAGTTAAGGTGG+TGG | 0.510388 | 4_2:+71525536 | Msa0620200:CDS |
| GTCAGTCACACTAAACCAAT+GGG | 0.518992 | 4_2:+71524103 | Msa0620200:exon |
| TCTGAAGGTGGTTTAGGGAT+CGG | 0.522573 | 4_2:-71524669 | None:intergenic |
| GCTGCAGCTGCAGAGGGAGA+TGG | 0.525345 | 4_2:+71525486 | Msa0620200:CDS |
| TGATAATGATAATGAAATCT+GGG | 0.533220 | 4_2:+71525744 | Msa0620200:three_prime_UTR |
| GGAAGAAAAGAAAGCTGAAG+AGG | 0.548605 | 4_2:+71524734 | Msa0620200:CDS |
| AACTCACTAGTGACAGTGAA+AGG | 0.549081 | 4_2:+71525276 | Msa0620200:CDS |
| AGAGAACCAACCTCTCCCAT+TGG | 0.550262 | 4_2:-71524118 | None:intergenic |
| AAAGTCTTCATGCATTGTGA+AGG | 0.559957 | 4_2:+71524399 | Msa0620200:CDS |
| TAAAACTCCGTACCATACCT+TGG | 0.562455 | 4_2:-71525591 | None:intergenic |
| AGAATCACTATCATAACCTT+AGG | 0.564388 | 4_2:-71524849 | None:intergenic |
| TAATCCACCAAGGTATGGTA+CGG | 0.565997 | 4_2:+71525584 | Msa0620200:CDS |
| CATCACTGAAAATTTGAGGA+GGG | 0.566558 | 4_2:-71525635 | None:intergenic |
| TGGTGCAGAAGAAGTTAAGG+TGG | 0.570601 | 4_2:+71525533 | Msa0620200:CDS |
| AGTGTGACTGACTGACTCAA+AGG | 0.570706 | 4_2:-71524092 | None:intergenic |
| AGTCAGTCACACTAAACCAA+TGG | 0.572674 | 4_2:+71524102 | Msa0620200:exon |
| CCAAGTGGTGATGGAGGAGG+TGG | 0.579532 | 4_2:+71525513 | Msa0620200:CDS |
| AAACCAAGTGGTGATGGAGG+AGG | 0.582262 | 4_2:+71525510 | Msa0620200:CDS |
| AACTCCGTACCATACCTTGG+TGG | 0.588756 | 4_2:-71525588 | None:intergenic |
| TGAGGAGGGTAAGCTGGACC+AGG | 0.590722 | 4_2:-71525621 | None:intergenic |
| TACTGCAGGGAAAAGTACAT+AGG | 0.593196 | 4_2:-71525795 | None:intergenic |
| AGACGCATTGAGAAAATCAA+AGG | 0.596928 | 4_2:+71524915 | Msa0620200:CDS |
| GGAAAACCAAGTGGTGATGG+AGG | 0.597768 | 4_2:+71525507 | Msa0620200:CDS |
| ACTGCAGGGAAAAGTACATA+GGG | 0.600268 | 4_2:-71525794 | None:intergenic |
| ACCAGAGGAAACGAAAGTAG+AGG | 0.601453 | 4_2:+71524254 | Msa0620200:CDS |
| CTGGGTGAAAGCCATATCCT+GGG | 0.602074 | 4_2:+71525762 | Msa0620200:three_prime_UTR |
| TACTGATTGCAAATCTCACA+AGG | 0.619184 | 4_2:+71524560 | Msa0620200:CDS |
| TCATCACTGAAAATTTGAGG+AGG | 0.625780 | 4_2:-71525636 | None:intergenic |
| TCACACTAAACCAATGGGAG+AGG | 0.633440 | 4_2:+71524108 | Msa0620200:exon |
| AGGTTCTTGAAAGAGTTCAG+AGG | 0.645167 | 4_2:+71524616 | Msa0620200:CDS |
| TAGAAGCTAGGTTGGTTCTG+CGG | 0.646213 | 4_2:-71524030 | None:intergenic |
| ACTTTAAGCACAATTTCTGG+CGG | 0.689016 | 4_2:-71524381 | None:intergenic |
| ACATAGGGCACATCTTACCC+AGG | 0.692217 | 4_2:-71525779 | None:intergenic |
| ATAGGAAGAAAAGAAACCAG+AGG | 0.703898 | 4_2:+71524239 | Msa0620200:intron |
| GAGGGAGATGGAAAACCAAG+TGG | 0.706478 | 4_2:+71525498 | Msa0620200:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATTTTAATAATATTGTTTC+TGG | + | chr4_2:71524191-71524210 | Msa0620200:intron | 15.0% |
| !!! | TAAAAATTTGGTAATGATAA+GGG | + | chr4_2:71525684-71525703 | Msa0620200:exon | 15.0% |
| !!! | CATTTTAATAATATTGTTTC+TGG | + | chr4_2:71524191-71524210 | Msa0620200:intron | 15.0% |
| !!! | TAAAAATTTGGTAATGATAA+GGG | + | chr4_2:71525684-71525703 | Msa0620200:exon | 15.0% |
| !!! | TTAAAAACACCGAAATTTTA+AGG | + | chr4_2:71523995-71524014 | Msa0620200:five_prime_UTR | 20.0% |
| !!! | CTTTTTTTGCCTTAAAATTT+CGG | - | chr4_2:71524007-71524026 | None:intergenic | 20.0% |
| !!! | TTTTTGTTGTTGTTTTGAAT+AGG | + | chr4_2:71524221-71524240 | Msa0620200:intron | 20.0% |
| !!! | AGAAAAAAAGTGTAAAGAAA+AGG | - | chr4_2:71524479-71524498 | None:intergenic | 20.0% |
| !! | TAATGATTAATTGTTTGTGA+TGG | + | chr4_2:71524512-71524531 | Msa0620200:intron | 20.0% |
| !! | CTTGATAAAATATTTGTAAG+TGG | + | chr4_2:71525156-71525175 | Msa0620200:intron | 20.0% |
| !! | TTAAAATTATATTCACATGC+AGG | + | chr4_2:71525225-71525244 | Msa0620200:intron | 20.0% |
| !!! | AATATTATTTTAATCCACCA+AGG | + | chr4_2:71525574-71525593 | Msa0620200:CDS | 20.0% |
| !! | TGTTCTATCATGTAAAAATT+TGG | + | chr4_2:71525672-71525691 | Msa0620200:exon | 20.0% |
| !!! | GTAAAAATTTGGTAATGATA+AGG | + | chr4_2:71525683-71525702 | Msa0620200:exon | 20.0% |
| !!! | ATGATAATGATAATGAAATC+TGG | + | chr4_2:71525743-71525762 | Msa0620200:three_prime_UTR | 20.0% |
| !!! | TGATAATGATAATGAAATCT+GGG | + | chr4_2:71525744-71525763 | Msa0620200:three_prime_UTR | 20.0% |
| !!! | TTAAAAACACCGAAATTTTA+AGG | + | chr4_2:71523995-71524014 | Msa0620200:five_prime_UTR | 20.0% |
| !!! | CTTTTTTTGCCTTAAAATTT+CGG | - | chr4_2:71524007-71524026 | None:intergenic | 20.0% |
| !!! | TTTTTGTTGTTGTTTTGAAT+AGG | + | chr4_2:71524221-71524240 | Msa0620200:intron | 20.0% |
| !!! | AGAAAAAAAGTGTAAAGAAA+AGG | - | chr4_2:71524479-71524498 | None:intergenic | 20.0% |
| !! | TAATGATTAATTGTTTGTGA+TGG | + | chr4_2:71524512-71524531 | Msa0620200:intron | 20.0% |
| !! | CTTGATAAAATATTTGTAAG+TGG | + | chr4_2:71525156-71525175 | Msa0620200:intron | 20.0% |
| !! | TTAAAATTATATTCACATGC+AGG | + | chr4_2:71525225-71525244 | Msa0620200:intron | 20.0% |
| !!! | AATATTATTTTAATCCACCA+AGG | + | chr4_2:71525574-71525593 | Msa0620200:CDS | 20.0% |
| !! | TGTTCTATCATGTAAAAATT+TGG | + | chr4_2:71525672-71525691 | Msa0620200:exon | 20.0% |
| !!! | GTAAAAATTTGGTAATGATA+AGG | + | chr4_2:71525683-71525702 | Msa0620200:exon | 20.0% |
| !!! | ATGATAATGATAATGAAATC+TGG | + | chr4_2:71525743-71525762 | Msa0620200:three_prime_UTR | 20.0% |
| !!! | TGATAATGATAATGAAATCT+GGG | + | chr4_2:71525744-71525763 | Msa0620200:three_prime_UTR | 20.0% |
| !! | TTCTTCTTTTCTTCTTTCTT+CGG | - | chr4_2:71524300-71524319 | None:intergenic | 25.0% |
| !!! | ATTTTTTTCTCTTGTTCTGA+AGG | - | chr4_2:71524687-71524706 | None:intergenic | 25.0% |
| !!! | TCACTTTTATTTCATTCACT+TGG | + | chr4_2:71524982-71525001 | Msa0620200:intron | 25.0% |
| !!! | AGTTTTTTTCTCTTCTTCTT+TGG | - | chr4_2:71525406-71525425 | None:intergenic | 25.0% |
| !! | TTTTCATCACTGAAAATTTG+AGG | - | chr4_2:71525642-71525661 | None:intergenic | 25.0% |
| ! | TAAGGGTAATATTGGAATTA+TGG | + | chr4_2:71525701-71525720 | Msa0620200:three_prime_UTR | 25.0% |
| !! | TTCTTCTTTTCTTCTTTCTT+CGG | - | chr4_2:71524300-71524319 | None:intergenic | 25.0% |
| !!! | ATTTTTTTCTCTTGTTCTGA+AGG | - | chr4_2:71524687-71524706 | None:intergenic | 25.0% |
| !!! | TCACTTTTATTTCATTCACT+TGG | + | chr4_2:71524982-71525001 | Msa0620200:intron | 25.0% |
| !!! | AGTTTTTTTCTCTTCTTCTT+TGG | - | chr4_2:71525406-71525425 | None:intergenic | 25.0% |
| !! | TTTTCATCACTGAAAATTTG+AGG | - | chr4_2:71525642-71525661 | None:intergenic | 25.0% |
| ! | TAAGGGTAATATTGGAATTA+TGG | + | chr4_2:71525701-71525720 | Msa0620200:three_prime_UTR | 25.0% |
| AAGACTTTAAGCACAATTTC+TGG | - | chr4_2:71524387-71524406 | None:intergenic | 30.0% | |
| !!! | TTGTTTGTGATGGATTTTTC+AGG | + | chr4_2:71524522-71524541 | Msa0620200:intron | 30.0% |
| !!! | TGTTTGTGATGGATTTTTCA+GGG | + | chr4_2:71524523-71524542 | Msa0620200:intron | 30.0% |
| TGTTGTTAAAGGAGAAAAAG+CGG | + | chr4_2:71524584-71524603 | Msa0620200:CDS | 30.0% | |
| !!! | TTTTTTATCTGAACCTGTGA+TGG | + | chr4_2:71524790-71524809 | Msa0620200:intron | 30.0% |
| ATGATAAAATGATCCATCAC+AGG | - | chr4_2:71524806-71524825 | None:intergenic | 30.0% | |
| AGAATCACTATCATAACCTT+AGG | - | chr4_2:71524852-71524871 | None:intergenic | 30.0% | |
| ! | CTTGGTTTGATTCAATTATC+AGG | + | chr4_2:71525000-71525019 | Msa0620200:intron | 30.0% |
| AAATCTGACAAATTCCTGAA+AGG | - | chr4_2:71525032-71525051 | None:intergenic | 30.0% | |
| GAATATGTTTACAAGAGAAC+TGG | + | chr4_2:71525324-71525343 | Msa0620200:CDS | 30.0% | |
| !!! | TTTGGATGTTCTTTTTTCTC+TGG | - | chr4_2:71525378-71525397 | None:intergenic | 30.0% |
| !! | TCTTCTTCTTTGGTTTCTTT+TGG | - | chr4_2:71525396-71525415 | None:intergenic | 30.0% |
| AGAAGAAGAGAAAAAAACTG+AGG | + | chr4_2:71525407-71525426 | Msa0620200:CDS | 30.0% | |
| AAGGTGAAAAAGATCAGAAA+GGG | + | chr4_2:71525430-71525449 | Msa0620200:CDS | 30.0% | |
| !!! | TATTTTAATCCACCAAGGTA+TGG | + | chr4_2:71525579-71525598 | Msa0620200:CDS | 30.0% |
| TACATGATAGAACAAGCATT+TGG | - | chr4_2:71525666-71525685 | None:intergenic | 30.0% | |
| GGTAATGATAAGGGTAATAT+TGG | + | chr4_2:71525693-71525712 | Msa0620200:three_prime_UTR | 30.0% | |
| !!! | ATTACACTTTTTCTACTGCA+GGG | - | chr4_2:71525811-71525830 | None:intergenic | 30.0% |
| AAGACTTTAAGCACAATTTC+TGG | - | chr4_2:71524387-71524406 | None:intergenic | 30.0% | |
| !!! | TTGTTTGTGATGGATTTTTC+AGG | + | chr4_2:71524522-71524541 | Msa0620200:intron | 30.0% |
| !!! | TGTTTGTGATGGATTTTTCA+GGG | + | chr4_2:71524523-71524542 | Msa0620200:intron | 30.0% |
| TGTTGTTAAAGGAGAAAAAG+CGG | + | chr4_2:71524584-71524603 | Msa0620200:CDS | 30.0% | |
| !!! | TTTTTTATCTGAACCTGTGA+TGG | + | chr4_2:71524790-71524809 | Msa0620200:intron | 30.0% |
| ATGATAAAATGATCCATCAC+AGG | - | chr4_2:71524806-71524825 | None:intergenic | 30.0% | |
| AGAATCACTATCATAACCTT+AGG | - | chr4_2:71524852-71524871 | None:intergenic | 30.0% | |
| ! | CTTGGTTTGATTCAATTATC+AGG | + | chr4_2:71525000-71525019 | Msa0620200:intron | 30.0% |
| AAATCTGACAAATTCCTGAA+AGG | - | chr4_2:71525032-71525051 | None:intergenic | 30.0% | |
| GAATATGTTTACAAGAGAAC+TGG | + | chr4_2:71525324-71525343 | Msa0620200:CDS | 30.0% | |
| !!! | TTTGGATGTTCTTTTTTCTC+TGG | - | chr4_2:71525378-71525397 | None:intergenic | 30.0% |
| !! | TCTTCTTCTTTGGTTTCTTT+TGG | - | chr4_2:71525396-71525415 | None:intergenic | 30.0% |
| AGAAGAAGAGAAAAAAACTG+AGG | + | chr4_2:71525407-71525426 | Msa0620200:CDS | 30.0% | |
| AAGGTGAAAAAGATCAGAAA+GGG | + | chr4_2:71525430-71525449 | Msa0620200:CDS | 30.0% | |
| !!! | TATTTTAATCCACCAAGGTA+TGG | + | chr4_2:71525579-71525598 | Msa0620200:CDS | 30.0% |
| TACATGATAGAACAAGCATT+TGG | - | chr4_2:71525666-71525685 | None:intergenic | 30.0% | |
| GGTAATGATAAGGGTAATAT+TGG | + | chr4_2:71525693-71525712 | Msa0620200:three_prime_UTR | 30.0% | |
| !!! | ATTACACTTTTTCTACTGCA+GGG | - | chr4_2:71525811-71525830 | None:intergenic | 30.0% |
| ATAGGAAGAAAAGAAACCAG+AGG | + | chr4_2:71524239-71524258 | Msa0620200:intron | 35.0% | |
| ! | TTCTTTTCTTCTTTCTTCGG+TGG | - | chr4_2:71524297-71524316 | None:intergenic | 35.0% |
| !!! | GGTTTTTTCTCTTCTTCTGT+CGG | - | chr4_2:71524339-71524358 | None:intergenic | 35.0% |
| GACAGAAGAAGAGAAAAAAC+CGG | + | chr4_2:71524338-71524357 | Msa0620200:CDS | 35.0% | |
| ! | ACTTTAAGCACAATTTCTGG+CGG | - | chr4_2:71524384-71524403 | None:intergenic | 35.0% |
| AAAGTCTTCATGCATTGTGA+AGG | + | chr4_2:71524399-71524418 | Msa0620200:CDS | 35.0% | |
| !!! | GTTTGTGATGGATTTTTCAG+GGG | + | chr4_2:71524524-71524543 | Msa0620200:intron | 35.0% |
| ! | TACTGATTGCAAATCTCACA+AGG | + | chr4_2:71524560-71524579 | Msa0620200:CDS | 35.0% |
| ! | TCTCACAAGGTTGTTGTTAA+AGG | + | chr4_2:71524573-71524592 | Msa0620200:CDS | 35.0% |
| ACTCTTTCAAGAACCTTCAA+TGG | - | chr4_2:71524612-71524631 | None:intergenic | 35.0% | |
| !!! | TTTTTCTCTTGTTCTGAAGG+TGG | - | chr4_2:71524684-71524703 | None:intergenic | 35.0% |
| TTATTATATGGTGCAGCCTA+AGG | + | chr4_2:71524833-71524852 | Msa0620200:intron | 35.0% | |
| AGACGCATTGAGAAAATCAA+AGG | + | chr4_2:71524915-71524934 | Msa0620200:CDS | 35.0% | |
| TGACAAATTCCTGAAAGGAT+GGG | - | chr4_2:71525027-71525046 | None:intergenic | 35.0% | |
| GAAGAGAAAAAAACTGAGGA+AGG | + | chr4_2:71525411-71525430 | Msa0620200:CDS | 35.0% | |
| GAAGGTGAAAAAGATCAGAA+AGG | + | chr4_2:71525429-71525448 | Msa0620200:CDS | 35.0% | |
| CATCACTGAAAATTTGAGGA+GGG | - | chr4_2:71525638-71525657 | None:intergenic | 35.0% | |
| TCATCACTGAAAATTTGAGG+AGG | - | chr4_2:71525639-71525658 | None:intergenic | 35.0% | |
| !!! | GATTACACTTTTTCTACTGC+AGG | - | chr4_2:71525812-71525831 | None:intergenic | 35.0% |
| ATAGGAAGAAAAGAAACCAG+AGG | + | chr4_2:71524239-71524258 | Msa0620200:intron | 35.0% | |
| ! | TTCTTTTCTTCTTTCTTCGG+TGG | - | chr4_2:71524297-71524316 | None:intergenic | 35.0% |
| !!! | GGTTTTTTCTCTTCTTCTGT+CGG | - | chr4_2:71524339-71524358 | None:intergenic | 35.0% |
| GACAGAAGAAGAGAAAAAAC+CGG | + | chr4_2:71524338-71524357 | Msa0620200:CDS | 35.0% | |
| ! | ACTTTAAGCACAATTTCTGG+CGG | - | chr4_2:71524384-71524403 | None:intergenic | 35.0% |
| AAAGTCTTCATGCATTGTGA+AGG | + | chr4_2:71524399-71524418 | Msa0620200:CDS | 35.0% | |
| !!! | GTTTGTGATGGATTTTTCAG+GGG | + | chr4_2:71524524-71524543 | Msa0620200:intron | 35.0% |
| ! | TACTGATTGCAAATCTCACA+AGG | + | chr4_2:71524560-71524579 | Msa0620200:CDS | 35.0% |
| ! | TCTCACAAGGTTGTTGTTAA+AGG | + | chr4_2:71524573-71524592 | Msa0620200:CDS | 35.0% |
| ACTCTTTCAAGAACCTTCAA+TGG | - | chr4_2:71524612-71524631 | None:intergenic | 35.0% | |
| !!! | TTTTTCTCTTGTTCTGAAGG+TGG | - | chr4_2:71524684-71524703 | None:intergenic | 35.0% |
| TTATTATATGGTGCAGCCTA+AGG | + | chr4_2:71524833-71524852 | Msa0620200:intron | 35.0% | |
| AGACGCATTGAGAAAATCAA+AGG | + | chr4_2:71524915-71524934 | Msa0620200:CDS | 35.0% | |
| TGACAAATTCCTGAAAGGAT+GGG | - | chr4_2:71525027-71525046 | None:intergenic | 35.0% | |
| GAAGAGAAAAAAACTGAGGA+AGG | + | chr4_2:71525411-71525430 | Msa0620200:CDS | 35.0% | |
| GAAGGTGAAAAAGATCAGAA+AGG | + | chr4_2:71525429-71525448 | Msa0620200:CDS | 35.0% | |
| CATCACTGAAAATTTGAGGA+GGG | - | chr4_2:71525638-71525657 | None:intergenic | 35.0% | |
| TCATCACTGAAAATTTGAGG+AGG | - | chr4_2:71525639-71525658 | None:intergenic | 35.0% | |
| !!! | GATTACACTTTTTCTACTGC+AGG | - | chr4_2:71525812-71525831 | None:intergenic | 35.0% |
| AGTCAGTCACACTAAACCAA+TGG | + | chr4_2:71524102-71524121 | Msa0620200:exon | 40.0% | |
| GTCAGTCACACTAAACCAAT+GGG | + | chr4_2:71524103-71524122 | Msa0620200:exon | 40.0% | |
| AGTAGAGGAGAAAAAACCAG+AGG | + | chr4_2:71524269-71524288 | Msa0620200:CDS | 40.0% | |
| ! | TTTTTCTCTTCTTCTGTCGG+TGG | - | chr4_2:71524336-71524355 | None:intergenic | 40.0% |
| AGAAGAAGAGAAAAAACCGG+AGG | + | chr4_2:71524341-71524360 | Msa0620200:CDS | 40.0% | |
| GAAAAAACCGGAGGAATCTA+AGG | + | chr4_2:71524350-71524369 | Msa0620200:CDS | 40.0% | |
| GTAACTTCCTTAGATTCCTC+CGG | - | chr4_2:71524360-71524379 | None:intergenic | 40.0% | |
| AAAGTTCGTCGTTCACTCAA+AGG | + | chr4_2:71524432-71524451 | Msa0620200:CDS | 40.0% | |
| AAAAGGCAAAACTCTTCACC+TGG | - | chr4_2:71524462-71524481 | None:intergenic | 40.0% | |
| AGAAAAAGCGGATCCATTGA+AGG | + | chr4_2:71524596-71524615 | Msa0620200:CDS | 40.0% | |
| AGGTTCTTGAAAGAGTTCAG+AGG | + | chr4_2:71524616-71524635 | Msa0620200:CDS | 40.0% | |
| !! | CTTGTTCTGAAGGTGGTTTA+GGG | - | chr4_2:71524677-71524696 | None:intergenic | 40.0% |
| !! | TCTTGTTCTGAAGGTGGTTT+AGG | - | chr4_2:71524678-71524697 | None:intergenic | 40.0% |
| ! | TTCTTTTCTTCCTGTGGCTT+AGG | - | chr4_2:71524726-71524745 | None:intergenic | 40.0% |
| ! | TCAGCTTTCTTTTCTTCCTG+TGG | - | chr4_2:71524732-71524751 | None:intergenic | 40.0% |
| GGAAGAAAAGAAAGCTGAAG+AGG | + | chr4_2:71524734-71524753 | Msa0620200:CDS | 40.0% | |
| CTGACAAATTCCTGAAAGGA+TGG | - | chr4_2:71525028-71525047 | None:intergenic | 40.0% | |
| ACTAGTGAGTTCTTCAGATC+CGG | - | chr4_2:71525267-71525286 | None:intergenic | 40.0% | |
| AACTCACTAGTGACAGTGAA+AGG | + | chr4_2:71525276-71525295 | Msa0620200:CDS | 40.0% | |
| GAAAAAGATCAGAAAGGGAG+TGG | + | chr4_2:71525435-71525454 | Msa0620200:CDS | 40.0% | |
| TAATCCACCAAGGTATGGTA+CGG | + | chr4_2:71525584-71525603 | Msa0620200:CDS | 40.0% | |
| TAAAACTCCGTACCATACCT+TGG | - | chr4_2:71525594-71525613 | None:intergenic | 40.0% | |
| !! | ACGGAGTTTTATGCATATCC+TGG | + | chr4_2:71525603-71525622 | Msa0620200:CDS | 40.0% |
| AAAATTTGAGGAGGGTAAGC+TGG | - | chr4_2:71525630-71525649 | None:intergenic | 40.0% | |
| ! | ACTGCAGGGAAAAGTACATA+GGG | - | chr4_2:71525797-71525816 | None:intergenic | 40.0% |
| ! | TACTGCAGGGAAAAGTACAT+AGG | - | chr4_2:71525798-71525817 | None:intergenic | 40.0% |
| AGTCAGTCACACTAAACCAA+TGG | + | chr4_2:71524102-71524121 | Msa0620200:exon | 40.0% | |
| GTCAGTCACACTAAACCAAT+GGG | + | chr4_2:71524103-71524122 | Msa0620200:exon | 40.0% | |
| AGTAGAGGAGAAAAAACCAG+AGG | + | chr4_2:71524269-71524288 | Msa0620200:CDS | 40.0% | |
| ! | TTTTTCTCTTCTTCTGTCGG+TGG | - | chr4_2:71524336-71524355 | None:intergenic | 40.0% |
| AGAAGAAGAGAAAAAACCGG+AGG | + | chr4_2:71524341-71524360 | Msa0620200:CDS | 40.0% | |
| GAAAAAACCGGAGGAATCTA+AGG | + | chr4_2:71524350-71524369 | Msa0620200:CDS | 40.0% | |
| GTAACTTCCTTAGATTCCTC+CGG | - | chr4_2:71524360-71524379 | None:intergenic | 40.0% | |
| AAAGTTCGTCGTTCACTCAA+AGG | + | chr4_2:71524432-71524451 | Msa0620200:CDS | 40.0% | |
| AAAAGGCAAAACTCTTCACC+TGG | - | chr4_2:71524462-71524481 | None:intergenic | 40.0% | |
| AGAAAAAGCGGATCCATTGA+AGG | + | chr4_2:71524596-71524615 | Msa0620200:CDS | 40.0% | |
| AGGTTCTTGAAAGAGTTCAG+AGG | + | chr4_2:71524616-71524635 | Msa0620200:CDS | 40.0% | |
| !! | CTTGTTCTGAAGGTGGTTTA+GGG | - | chr4_2:71524677-71524696 | None:intergenic | 40.0% |
| !! | TCTTGTTCTGAAGGTGGTTT+AGG | - | chr4_2:71524678-71524697 | None:intergenic | 40.0% |
| ! | TTCTTTTCTTCCTGTGGCTT+AGG | - | chr4_2:71524726-71524745 | None:intergenic | 40.0% |
| ! | TCAGCTTTCTTTTCTTCCTG+TGG | - | chr4_2:71524732-71524751 | None:intergenic | 40.0% |
| GGAAGAAAAGAAAGCTGAAG+AGG | + | chr4_2:71524734-71524753 | Msa0620200:CDS | 40.0% | |
| CTGACAAATTCCTGAAAGGA+TGG | - | chr4_2:71525028-71525047 | None:intergenic | 40.0% | |
| ACTAGTGAGTTCTTCAGATC+CGG | - | chr4_2:71525267-71525286 | None:intergenic | 40.0% | |
| AACTCACTAGTGACAGTGAA+AGG | + | chr4_2:71525276-71525295 | Msa0620200:CDS | 40.0% | |
| GAAAAAGATCAGAAAGGGAG+TGG | + | chr4_2:71525435-71525454 | Msa0620200:CDS | 40.0% | |
| TAATCCACCAAGGTATGGTA+CGG | + | chr4_2:71525584-71525603 | Msa0620200:CDS | 40.0% | |
| TAAAACTCCGTACCATACCT+TGG | - | chr4_2:71525594-71525613 | None:intergenic | 40.0% | |
| !! | ACGGAGTTTTATGCATATCC+TGG | + | chr4_2:71525603-71525622 | Msa0620200:CDS | 40.0% |
| AAAATTTGAGGAGGGTAAGC+TGG | - | chr4_2:71525630-71525649 | None:intergenic | 40.0% | |
| ! | ACTGCAGGGAAAAGTACATA+GGG | - | chr4_2:71525797-71525816 | None:intergenic | 40.0% |
| ! | TACTGCAGGGAAAAGTACAT+AGG | - | chr4_2:71525798-71525817 | None:intergenic | 40.0% |
| !! | TAGAAGCTAGGTTGGTTCTG+CGG | - | chr4_2:71524033-71524052 | None:intergenic | 45.0% |
| GAGAGAGATAGAAGCTAGGT+TGG | - | chr4_2:71524041-71524060 | None:intergenic | 45.0% | |
| GAGAGAGAGAGATAGAAGCT+AGG | - | chr4_2:71524045-71524064 | None:intergenic | 45.0% | |
| ! | AGTGTGACTGACTGACTCAA+AGG | - | chr4_2:71524095-71524114 | None:intergenic | 45.0% |
| TCACACTAAACCAATGGGAG+AGG | + | chr4_2:71524108-71524127 | Msa0620200:exon | 45.0% | |
| ACTAAACCAATGGGAGAGGT+TGG | + | chr4_2:71524112-71524131 | Msa0620200:intron | 45.0% | |
| ACCAGAGGAAACGAAAGTAG+AGG | + | chr4_2:71524254-71524273 | Msa0620200:CDS | 45.0% | |
| TCCTCTACTTTCGTTTCCTC+TGG | - | chr4_2:71524258-71524277 | None:intergenic | 45.0% | |
| ! | CGTTCACTCAAAGGTTTTCC+AGG | + | chr4_2:71524441-71524460 | Msa0620200:CDS | 45.0% |
| TCTGAAGGTGGTTTAGGGAT+CGG | - | chr4_2:71524672-71524691 | None:intergenic | 45.0% | |
| GAAAGAGAAACCTAAGCCAC+AGG | + | chr4_2:71524713-71524732 | Msa0620200:CDS | 45.0% | |
| TTATCAGGTCCCATCCTTTC+AGG | + | chr4_2:71525015-71525034 | Msa0620200:intron | 45.0% | |
| AGGAGTTGAATCAGCTGAAC+CGG | + | chr4_2:71525245-71525264 | Msa0620200:intron | 45.0% | |
| GATGGAAAACCAAGTGGTGA+TGG | + | chr4_2:71525504-71525523 | Msa0620200:CDS | 45.0% | |
| AGGTGGTGCAGAAGAAGTTA+AGG | + | chr4_2:71525530-71525549 | Msa0620200:CDS | 45.0% | |
| TGGTGCAGAAGAAGTTAAGG+TGG | + | chr4_2:71525533-71525552 | Msa0620200:CDS | 45.0% | |
| TGCAGAAGAAGTTAAGGTGG+TGG | + | chr4_2:71525536-71525555 | Msa0620200:CDS | 45.0% | |
| !! | TAGAAGCTAGGTTGGTTCTG+CGG | - | chr4_2:71524033-71524052 | None:intergenic | 45.0% |
| GAGAGAGATAGAAGCTAGGT+TGG | - | chr4_2:71524041-71524060 | None:intergenic | 45.0% | |
| GAGAGAGAGAGATAGAAGCT+AGG | - | chr4_2:71524045-71524064 | None:intergenic | 45.0% | |
| ! | AGTGTGACTGACTGACTCAA+AGG | - | chr4_2:71524095-71524114 | None:intergenic | 45.0% |
| TCACACTAAACCAATGGGAG+AGG | + | chr4_2:71524108-71524127 | Msa0620200:exon | 45.0% | |
| ACTAAACCAATGGGAGAGGT+TGG | + | chr4_2:71524112-71524131 | Msa0620200:intron | 45.0% | |
| ACCAGAGGAAACGAAAGTAG+AGG | + | chr4_2:71524254-71524273 | Msa0620200:CDS | 45.0% | |
| TCCTCTACTTTCGTTTCCTC+TGG | - | chr4_2:71524258-71524277 | None:intergenic | 45.0% | |
| ! | CGTTCACTCAAAGGTTTTCC+AGG | + | chr4_2:71524441-71524460 | Msa0620200:CDS | 45.0% |
| TCTGAAGGTGGTTTAGGGAT+CGG | - | chr4_2:71524672-71524691 | None:intergenic | 45.0% | |
| GAAAGAGAAACCTAAGCCAC+AGG | + | chr4_2:71524713-71524732 | Msa0620200:CDS | 45.0% | |
| TTATCAGGTCCCATCCTTTC+AGG | + | chr4_2:71525015-71525034 | Msa0620200:intron | 45.0% | |
| AGGAGTTGAATCAGCTGAAC+CGG | + | chr4_2:71525245-71525264 | Msa0620200:intron | 45.0% | |
| GATGGAAAACCAAGTGGTGA+TGG | + | chr4_2:71525504-71525523 | Msa0620200:CDS | 45.0% | |
| AGGTGGTGCAGAAGAAGTTA+AGG | + | chr4_2:71525530-71525549 | Msa0620200:CDS | 45.0% | |
| TGGTGCAGAAGAAGTTAAGG+TGG | + | chr4_2:71525533-71525552 | Msa0620200:CDS | 45.0% | |
| TGCAGAAGAAGTTAAGGTGG+TGG | + | chr4_2:71525536-71525555 | Msa0620200:CDS | 45.0% | |
| !!! | ATCATTTTTATTTTATTATA+TGG | + | chr4_2:71524821-71524840 | Msa0620200:intron | 5.0% |
| !!! | AGTTAAAATATTTTATAATA+AGG | - | chr4_2:71525138-71525157 | None:intergenic | 5.0% |
| !!! | ATCATTTTTATTTTATTATA+TGG | + | chr4_2:71524821-71524840 | Msa0620200:intron | 5.0% |
| !!! | AGTTAAAATATTTTATAATA+AGG | - | chr4_2:71525138-71525157 | None:intergenic | 5.0% |
| AGAGAACCAACCTCTCCCAT+TGG | - | chr4_2:71524121-71524140 | None:intergenic | 50.0% | |
| TCTTTCTTCGGTGGTTCCTC+TGG | - | chr4_2:71524288-71524307 | None:intergenic | 50.0% | |
| AAGTGGTCCTGCAAGTGCAA+AGG | + | chr4_2:71525173-71525192 | Msa0620200:intron | 50.0% | |
| AGTGGTCCTGCAAGTGCAAA+GGG | + | chr4_2:71525174-71525193 | Msa0620200:intron | 50.0% | |
| GATCAGAAAGGGAGTGGTGA+AGG | + | chr4_2:71525441-71525460 | Msa0620200:CDS | 50.0% | |
| GAGGGAGATGGAAAACCAAG+TGG | + | chr4_2:71525498-71525517 | Msa0620200:CDS | 50.0% | |
| !! | GGAAAACCAAGTGGTGATGG+AGG | + | chr4_2:71525507-71525526 | Msa0620200:CDS | 50.0% |
| !! | AAACCAAGTGGTGATGGAGG+AGG | + | chr4_2:71525510-71525529 | Msa0620200:CDS | 50.0% |
| AACTCCGTACCATACCTTGG+TGG | - | chr4_2:71525591-71525610 | None:intergenic | 50.0% | |
| TCTGGGTGAAAGCCATATCC+TGG | + | chr4_2:71525761-71525780 | Msa0620200:three_prime_UTR | 50.0% | |
| CTGGGTGAAAGCCATATCCT+GGG | + | chr4_2:71525762-71525781 | Msa0620200:three_prime_UTR | 50.0% | |
| GGCACATCTTACCCAGGATA+TGG | - | chr4_2:71525776-71525795 | None:intergenic | 50.0% | |
| ACATAGGGCACATCTTACCC+AGG | - | chr4_2:71525782-71525801 | None:intergenic | 50.0% | |
| AGAGAACCAACCTCTCCCAT+TGG | - | chr4_2:71524121-71524140 | None:intergenic | 50.0% | |
| TCTTTCTTCGGTGGTTCCTC+TGG | - | chr4_2:71524288-71524307 | None:intergenic | 50.0% | |
| AAGTGGTCCTGCAAGTGCAA+AGG | + | chr4_2:71525173-71525192 | Msa0620200:intron | 50.0% | |
| AGTGGTCCTGCAAGTGCAAA+GGG | + | chr4_2:71525174-71525193 | Msa0620200:intron | 50.0% | |
| GATCAGAAAGGGAGTGGTGA+AGG | + | chr4_2:71525441-71525460 | Msa0620200:CDS | 50.0% | |
| GAGGGAGATGGAAAACCAAG+TGG | + | chr4_2:71525498-71525517 | Msa0620200:CDS | 50.0% | |
| !! | GGAAAACCAAGTGGTGATGG+AGG | + | chr4_2:71525507-71525526 | Msa0620200:CDS | 50.0% |
| !! | AAACCAAGTGGTGATGGAGG+AGG | + | chr4_2:71525510-71525529 | Msa0620200:CDS | 50.0% |
| AACTCCGTACCATACCTTGG+TGG | - | chr4_2:71525591-71525610 | None:intergenic | 50.0% | |
| TCTGGGTGAAAGCCATATCC+TGG | + | chr4_2:71525761-71525780 | Msa0620200:three_prime_UTR | 50.0% | |
| CTGGGTGAAAGCCATATCCT+GGG | + | chr4_2:71525762-71525781 | Msa0620200:three_prime_UTR | 50.0% | |
| GGCACATCTTACCCAGGATA+TGG | - | chr4_2:71525776-71525795 | None:intergenic | 50.0% | |
| ACATAGGGCACATCTTACCC+AGG | - | chr4_2:71525782-71525801 | None:intergenic | 50.0% | |
| GTCACACCCTTTGCACTTGC+AGG | - | chr4_2:71525183-71525202 | None:intergenic | 55.0% | |
| GAAAGGGAGTGGTGAAGGAG+AGG | + | chr4_2:71525446-71525465 | Msa0620200:CDS | 55.0% | |
| GTCACACCCTTTGCACTTGC+AGG | - | chr4_2:71525183-71525202 | None:intergenic | 55.0% | |
| GAAAGGGAGTGGTGAAGGAG+AGG | + | chr4_2:71525446-71525465 | Msa0620200:CDS | 55.0% | |
| CCACCTCCTCCATCACCACT+TGG | - | chr4_2:71525516-71525535 | None:intergenic | 60.0% | |
| !! | CCAAGTGGTGATGGAGGAGG+TGG | + | chr4_2:71525513-71525532 | Msa0620200:CDS | 60.0% |
| TGAGGAGGGTAAGCTGGACC+AGG | - | chr4_2:71525624-71525643 | None:intergenic | 60.0% | |
| CCACCTCCTCCATCACCACT+TGG | - | chr4_2:71525516-71525535 | None:intergenic | 60.0% | |
| !! | CCAAGTGGTGATGGAGGAGG+TGG | + | chr4_2:71525513-71525532 | Msa0620200:CDS | 60.0% |
| TGAGGAGGGTAAGCTGGACC+AGG | - | chr4_2:71525624-71525643 | None:intergenic | 60.0% | |
| AGCTGCAGCTGCAGCTGCAG+AGG | + | chr4_2:71525479-71525498 | Msa0620200:CDS | 65.0% | |
| GCTGCAGCTGCAGCTGCAGA+GGG | + | chr4_2:71525480-71525499 | Msa0620200:CDS | 65.0% | |
| GCTGCAGCTGCAGAGGGAGA+TGG | + | chr4_2:71525486-71525505 | Msa0620200:CDS | 65.0% | |
| AGCTGCAGCTGCAGCTGCAG+AGG | + | chr4_2:71525479-71525498 | Msa0620200:CDS | 65.0% | |
| GCTGCAGCTGCAGCTGCAGA+GGG | + | chr4_2:71525480-71525499 | Msa0620200:CDS | 65.0% | |
| GCTGCAGCTGCAGAGGGAGA+TGG | + | chr4_2:71525486-71525505 | Msa0620200:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 71523956 | 71525947 | 71523956 | ID=Msa0620200;Name=Msa0620200 |
| chr4_2 | mRNA | 71523956 | 71525947 | 71523956 | ID=Msa0620200-mRNA-1;Parent=Msa0620200;Name=Msa0620200-mRNA-1;_AED=0.01;_eAED=0.01;_QI=165|1|1|1|1|1|5|261|322 |
| chr4_2 | exon | 71523956 | 71524129 | 71523956 | ID=Msa0620200-mRNA-1:exon:21174;Parent=Msa0620200-mRNA-1 |
| chr4_2 | exon | 71524243 | 71524462 | 71524243 | ID=Msa0620200-mRNA-1:exon:21175;Parent=Msa0620200-mRNA-1 |
| chr4_2 | exon | 71524544 | 71524755 | 71524544 | ID=Msa0620200-mRNA-1:exon:21176;Parent=Msa0620200-mRNA-1 |
| chr4_2 | exon | 71524849 | 71524936 | 71524849 | ID=Msa0620200-mRNA-1:exon:21177;Parent=Msa0620200-mRNA-1 |
| chr4_2 | exon | 71525247 | 71525947 | 71525247 | ID=Msa0620200-mRNA-1:exon:21178;Parent=Msa0620200-mRNA-1 |
| chr4_2 | five_prime_UTR | 71523956 | 71524120 | 71523956 | ID=Msa0620200-mRNA-1:five_prime_utr;Parent=Msa0620200-mRNA-1 |
| chr4_2 | CDS | 71524121 | 71524129 | 71524121 | ID=Msa0620200-mRNA-1:cds;Parent=Msa0620200-mRNA-1 |
| chr4_2 | CDS | 71524243 | 71524462 | 71524243 | ID=Msa0620200-mRNA-1:cds;Parent=Msa0620200-mRNA-1 |
| chr4_2 | CDS | 71524544 | 71524755 | 71524544 | ID=Msa0620200-mRNA-1:cds;Parent=Msa0620200-mRNA-1 |
| chr4_2 | CDS | 71524849 | 71524936 | 71524849 | ID=Msa0620200-mRNA-1:cds;Parent=Msa0620200-mRNA-1 |
| chr4_2 | CDS | 71525247 | 71525686 | 71525247 | ID=Msa0620200-mRNA-1:cds;Parent=Msa0620200-mRNA-1 |
| chr4_2 | three_prime_UTR | 71525687 | 71525947 | 71525687 | ID=Msa0620200-mRNA-1:three_prime_utr;Parent=Msa0620200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
