Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0573830 | XP_003630717.1 | 96.505 | 515 | 18 | 0 | 1 | 515 | 1 | 515 | 0.0 | 1026 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0573830 | sp|Q10181|YAW6_SCHPO | 28.685 | 502 | 288 | 13 | 17 | 508 | 9 | 450 | 1.53e-50 | 182 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0573830 | G7L7G1 | 96.505 | 515 | 18 | 0 | 1 | 515 | 1 | 515 | 0.0 | 1026 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0122590 | Msa0573830 | 0.825856 | 3.730689e-54 | -8.615850e-47 |
| Msa0166870 | Msa0573830 | 0.818037 | 2.415149e-52 | -8.615850e-47 |
| Msa0573830 | Msa0633060 | 0.802215 | 6.236081e-49 | -8.615850e-47 |
| Msa0573830 | Msa0707690 | 0.880984 | 3.497940e-70 | -8.615850e-47 |
| Msa0573830 | Msa1352330 | 0.881692 | 1.943641e-70 | -8.615850e-47 |
| Msa0573830 | Msa1393040 | 0.801215 | 1.000271e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0573830 | MtrunA17_Chr8g0389911 | 96.311 | 515 | 18 | 1 | 1 | 515 | 1 | 514 | 0.0 | 1020 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0573830 | AT2G40570.1 | 62.741 | 518 | 161 | 5 | 5 | 502 | 7 | 512 | 0.0 | 653 |
| Msa0573830 | AT2G40570.2 | 60.784 | 459 | 148 | 5 | 5 | 443 | 7 | 453 | 0.0 | 553 |
| Msa0573830 | AT2G40570.3 | 59.204 | 402 | 132 | 5 | 121 | 502 | 1 | 390 | 1.08e-162 | 468 |
Find 123 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCAACACATGTCACTAAA+TGG | 0.191161 | 4_1:+77128614 | Msa0573830:CDS |
| TTGGTTGGGTTCTACTAATT+TGG | 0.201180 | 4_1:+77127102 | Msa0573830:CDS |
| TTTAGGAATATTATTTAATA+AGG | 0.220304 | 4_1:-77127907 | None:intergenic |
| CAAGTATTTAACTTTCTTAT+TGG | 0.228126 | 4_1:+77128709 | Msa0573830:CDS |
| TTGAAGATTCTGAAATTTCT+TGG | 0.235449 | 4_1:+77127083 | Msa0573830:CDS |
| ATGTCACTATTTGATGAAAA+AGG | 0.238995 | 4_1:+77128423 | Msa0573830:CDS |
| GTTTAACTCCACCTCTCTTT+TGG | 0.254137 | 4_1:+77126867 | Msa0573830:CDS |
| CTCTTTGCACCTACCACTTT+GGG | 0.256359 | 4_1:+77126532 | Msa0573830:CDS |
| GCAGTTGGTGCATCTCAATT+TGG | 0.264652 | 4_1:+77127124 | Msa0573830:CDS |
| TTGGCGAAGCTCACAGCTTT+AGG | 0.269873 | 4_1:-77127924 | None:intergenic |
| CAAACCTTCGTTGTGGCTTA+TGG | 0.270853 | 4_1:+77125438 | Msa0573830:CDS |
| GTAACAAGTGGAATGGAAAT+TGG | 0.287730 | 4_1:-77125468 | None:intergenic |
| CAACAATATCTGCAACCTTC+TGG | 0.295584 | 4_1:-77126934 | None:intergenic |
| AGTCCATATGGGTATGGTTT+TGG | 0.297709 | 4_1:-77125925 | None:intergenic |
| GTTTATGATCTTATAAATTC+AGG | 0.311705 | 4_1:+77126896 | Msa0573830:CDS |
| AGAAACCATTACGTCCTCTA+TGG | 0.329597 | 4_1:+77126657 | Msa0573830:CDS |
| CATAATTATACTCTGATCTC+TGG | 0.352861 | 4_1:+77128889 | Msa0573830:three_prime_UTR |
| GATTCTGAAATTTCTTGGTT+GGG | 0.360518 | 4_1:+77127088 | Msa0573830:CDS |
| CTTCATGTGGCTCATCTTGC+CGG | 0.360588 | 4_1:+77125548 | Msa0573830:CDS |
| CACTTCATACTAACCACAAT+TGG | 0.366594 | 4_1:-77127791 | None:intergenic |
| CAGTCTGGGAAAACGACTTC+TGG | 0.367787 | 4_1:+77127956 | Msa0573830:CDS |
| CGCCAAGTTCAACCTCAGTC+TGG | 0.370680 | 4_1:+77127941 | Msa0573830:CDS |
| ATGCAGATATGCTTCTGAAC+TGG | 0.370735 | 4_1:-77127765 | None:intergenic |
| TTCAATTGAGGAGCACTTAG+AGG | 0.377011 | 4_1:+77126574 | Msa0573830:CDS |
| AAGTACCTCACCATGATTCT+TGG | 0.384534 | 4_1:+77126711 | Msa0573830:CDS |
| TTGGTGAAATCTCTCAATTA+TGG | 0.388583 | 4_1:+77125396 | Msa0573830:CDS |
| GGTTGCAGATATTGTTGAAA+AGG | 0.390385 | 4_1:+77126940 | Msa0573830:CDS |
| GCTCTTTGCACCTACCACTT+TGG | 0.397860 | 4_1:+77126531 | Msa0573830:CDS |
| AGAGAGAGAGATTTGGATGG+AGG | 0.401988 | 4_1:+77125256 | Msa0573830:exon |
| ATTGTTGATTCTACTAGAAA+AGG | 0.402225 | 4_1:+77125879 | Msa0573830:CDS |
| ATTAAGAACACAAGTCCATA+TGG | 0.405714 | 4_1:-77125937 | None:intergenic |
| TTTCTCAGAAAACCGTCATA+TGG | 0.434975 | 4_1:+77126681 | Msa0573830:CDS |
| TCCCAGACTGAGGTTGAACT+TGG | 0.441685 | 4_1:-77127943 | None:intergenic |
| AGATTCTGAAATTTCTTGGT+TGG | 0.447110 | 4_1:+77127087 | Msa0573830:CDS |
| CGGAGTTAGTCTTGTTGTGT+TGG | 0.451487 | 4_1:-77126787 | None:intergenic |
| AGTGACATGTGTTGGATTGA+AGG | 0.451734 | 4_1:-77128608 | None:intergenic |
| GTTGCAGATATTGTTGAAAA+GGG | 0.452363 | 4_1:+77126941 | Msa0573830:CDS |
| GTATTTAACTTTCTTATTGG+CGG | 0.453559 | 4_1:+77128712 | Msa0573830:CDS |
| TTCACATGAAGAACCGTCAC+TGG | 0.457939 | 4_1:+77127021 | Msa0573830:CDS |
| GGTTCTACTAATTTGGCAGT+TGG | 0.458544 | 4_1:+77127109 | Msa0573830:CDS |
| AGACTAACTCCGAGTTTAGC+TGG | 0.459669 | 4_1:+77126798 | Msa0573830:CDS |
| TGATGAAGAAAGTTGGTCTA+GGG | 0.459876 | 4_1:+77126844 | Msa0573830:CDS |
| AGTACCTCACCATGATTCTT+GGG | 0.460763 | 4_1:+77126712 | Msa0573830:CDS |
| GATTTGGATGGAGGTTTCAG+AGG | 0.461438 | 4_1:+77125265 | Msa0573830:exon |
| ATGATGAAGAAAGTTGGTCT+AGG | 0.463397 | 4_1:+77126843 | Msa0573830:CDS |
| TCCAACACATGTCACTAAAT+GGG | 0.469707 | 4_1:+77128615 | Msa0573830:CDS |
| TGCAGATATGCTTCTGAACT+GGG | 0.472467 | 4_1:-77127764 | None:intergenic |
| TAAAACAGGAGGACTCTGAT+TGG | 0.473484 | 4_1:+77126504 | Msa0573830:intron |
| TCCCATTTAGTGACATGTGT+TGG | 0.476657 | 4_1:-77128616 | None:intergenic |
| TTGGGTTCCCCTAACAGAAA+AGG | 0.481450 | 4_1:+77126550 | Msa0573830:CDS |
| GAAGCAGAGACAAGTATGAT+TGG | 0.483080 | 4_1:-77126743 | None:intergenic |
| TTCAGAATCTTCAAAAGACT+TGG | 0.483295 | 4_1:-77127074 | None:intergenic |
| CAGATATTGTTGAAAAGGGT+AGG | 0.485773 | 4_1:+77126945 | Msa0573830:CDS |
| ATTTGGATGGAGGTTTCAGA+GGG | 0.487914 | 4_1:+77125266 | Msa0573830:exon |
| ATGTAAAAGCAATATTAAAG+TGG | 0.490795 | 4_1:+77129052 | Msa0573830:three_prime_UTR |
| TGCCTCAAATTTCCTCTGCA+TGG | 0.501403 | 4_1:-77128688 | None:intergenic |
| TCTGCTTCTTCTTCGTCGAA+CGG | 0.507739 | 4_1:+77126758 | Msa0573830:CDS |
| AACAGAAAAGGCTTCAATTG+AGG | 0.512040 | 4_1:+77126562 | Msa0573830:CDS |
| TGGAATTATATACCAGGTGC+AGG | 0.514128 | 4_1:+77126818 | Msa0573830:CDS |
| TTCACATTGGTAGCACAGAA+AGG | 0.515456 | 4_1:+77125846 | Msa0573830:intron |
| AAAACAGGAGGACTCTGATT+GGG | 0.521682 | 4_1:+77126505 | Msa0573830:intron |
| AGTGGAGAAAGAACAATTGT+TGG | 0.522246 | 4_1:-77125513 | None:intergenic |
| GCCAAGTTCAACCTCAGTCT+GGG | 0.524140 | 4_1:+77127942 | Msa0573830:CDS |
| CTTCTGGTCTGTTGTAATGA+TGG | 0.525769 | 4_1:+77127972 | Msa0573830:CDS |
| ACCTTCTGGTTACACACATC+AGG | 0.526083 | 4_1:-77126920 | None:intergenic |
| AGGACGTAATGGTTTCTTCA+AGG | 0.532352 | 4_1:-77126651 | None:intergenic |
| TGTCCAAAACCATACCCATA+TGG | 0.535578 | 4_1:+77125922 | Msa0573830:CDS |
| TTTCTTCAAGGAAGCAGAGA+GGG | 0.542619 | 4_1:-77126639 | None:intergenic |
| ATATCTGCATCTTCCAATTG+TGG | 0.544558 | 4_1:+77127778 | Msa0573830:CDS |
| CAGGAGATGATGAAGAAAGT+TGG | 0.550974 | 4_1:+77126837 | Msa0573830:CDS |
| AACACAAGTCCATATGGGTA+TGG | 0.551677 | 4_1:-77125931 | None:intergenic |
| ATTTGAAGTAACAAGTGGAA+TGG | 0.557228 | 4_1:-77125475 | None:intergenic |
| TCTTCATCATCTCCTGCACC+TGG | 0.558959 | 4_1:-77126830 | None:intergenic |
| ACGCAGGAGGACGGTGAGGA+CGG | 0.560519 | 4_1:+77128751 | Msa0573830:CDS |
| TTGAGGAGCACTTAGAGGAA+TGG | 0.566335 | 4_1:+77126579 | Msa0573830:CDS |
| ACTACCGTGCCTTGACAACA+TGG | 0.566624 | 4_1:-77128977 | None:intergenic |
| CACTCTCTCCTCTATAAGCA+CGG | 0.569848 | 4_1:-77126973 | None:intergenic |
| TACTTCATTTAACCATATGA+CGG | 0.570101 | 4_1:-77126693 | None:intergenic |
| AGATATTGTTGAAAAGGGTA+GGG | 0.570383 | 4_1:+77126946 | Msa0573830:CDS |
| ACTGGGAAGACAGACAGTGA+TGG | 0.572511 | 4_1:-77127747 | None:intergenic |
| ACATCAATTGTGCCTCAACA+TGG | 0.575894 | 4_1:+77128862 | Msa0573830:three_prime_UTR |
| TTTATACATCCATGTTGTCA+AGG | 0.579731 | 4_1:+77128968 | Msa0573830:three_prime_UTR |
| GACCATGCAGAGGAAATTTG+AGG | 0.582442 | 4_1:+77128686 | Msa0573830:CDS |
| GAAATCCATAGAGGACGTAA+TGG | 0.585465 | 4_1:-77126662 | None:intergenic |
| CGGCAAGATGAGCCACATGA+AGG | 0.587451 | 4_1:-77125547 | None:intergenic |
| CAACGAAGGTTTGCGAGAAG+AGG | 0.590031 | 4_1:-77125428 | None:intergenic |
| AGGGTACGCCGTGCTTATAG+AGG | 0.592755 | 4_1:+77126965 | Msa0573830:CDS |
| TTAAGAACACAAGTCCATAT+GGG | 0.593188 | 4_1:-77125936 | None:intergenic |
| TAATTATGAATTCCATGTTG+AGG | 0.597906 | 4_1:-77128874 | None:intergenic |
| TAAACATGATTCCAAAAGAG+AGG | 0.602721 | 4_1:-77126878 | None:intergenic |
| GTGATTCTTACACTCAATTG+TGG | 0.603602 | 4_1:-77126011 | None:intergenic |
| ATGAAGGTTGAGACGAGCAG+TGG | 0.605089 | 4_1:-77125531 | None:intergenic |
| ACTCAACAATTGAAAGCAAG+TGG | 0.606898 | 4_1:+77126602 | Msa0573830:CDS |
| TGCTCGTCTCAACCTTCATG+TGG | 0.609552 | 4_1:+77125535 | Msa0573830:CDS |
| ACATGATTCCAAAAGAGAGG+TGG | 0.610571 | 4_1:-77126875 | None:intergenic |
| CTTCTCGCAAACCTTCGTTG+TGG | 0.610869 | 4_1:+77125431 | Msa0573830:CDS |
| CTAAATGGGATATGAGAAGA+CGG | 0.611731 | 4_1:+77128629 | Msa0573830:CDS |
| GATGAAGAAAGTTGGTCTAG+GGG | 0.614897 | 4_1:+77126845 | Msa0573830:CDS |
| GTGTGAAATCCCAAGAATCA+TGG | 0.615808 | 4_1:-77126721 | None:intergenic |
| TATATAATTCCAGCTAAACT+CGG | 0.617179 | 4_1:-77126807 | None:intergenic |
| TGTTACTTCAAATCCACCGA+TGG | 0.619805 | 4_1:+77125485 | Msa0573830:CDS |
| AGTGATTTAACTCTAATCTG+AGG | 0.620966 | 4_1:-77126998 | None:intergenic |
| TCTGTTAGGGGAACCCAAAG+TGG | 0.621990 | 4_1:-77126545 | None:intergenic |
| ATTCTTCAAACGCAGGAGGA+CGG | 0.622513 | 4_1:+77128742 | Msa0573830:CDS |
| ATTCAATATGCAATCAACAT+CGG | 0.622975 | 4_1:-77127711 | None:intergenic |
| TTTGCGAGAAGAGGAAGTTG+AGG | 0.623087 | 4_1:-77125419 | None:intergenic |
| GGTGGATTTGAAGTAACAAG+TGG | 0.624038 | 4_1:-77125480 | None:intergenic |
| ATTGTTGGTGTGACCATCGG+TGG | 0.626408 | 4_1:-77125498 | None:intergenic |
| TTAGGGGAACCCAAAGTGGT+AGG | 0.626546 | 4_1:-77126541 | None:intergenic |
| AAAATGCATTCTTCAAACGC+AGG | 0.634619 | 4_1:+77128735 | Msa0573830:CDS |
| GAAACATCAGAAGCCAGTGA+CGG | 0.635407 | 4_1:-77127034 | None:intergenic |
| ACATCCATGTTGTCAAGGCA+CGG | 0.635642 | 4_1:+77128973 | Msa0573830:three_prime_UTR |
| ACAATTGTTGGTGTGACCAT+CGG | 0.637223 | 4_1:-77125501 | None:intergenic |
| CAGGAGGACGGTGAGGACGG+TGG | 0.641896 | 4_1:+77128754 | Msa0573830:CDS |
| TTTAGCTGGAATTATATACC+AGG | 0.650098 | 4_1:+77126812 | Msa0573830:CDS |
| TCCTGATGTGTGTAACCAGA+AGG | 0.656585 | 4_1:+77126919 | Msa0573830:CDS |
| ACATTGGTAGCACAGAAAGG+TGG | 0.667927 | 4_1:+77125849 | Msa0573830:intron |
| ACAAATGCACGACCATGCAG+AGG | 0.670429 | 4_1:+77128676 | Msa0573830:CDS |
| ATGCATTCTTCAAACGCAGG+AGG | 0.677184 | 4_1:+77128738 | Msa0573830:CDS |
| TCAAACGCAGGAGGACGGTG+AGG | 0.691944 | 4_1:+77128747 | Msa0573830:CDS |
| AAATCCCAAGAATCATGGTG+AGG | 0.698775 | 4_1:-77126716 | None:intergenic |
| GTTTCTTCAAGGAAGCAGAG+AGG | 0.710661 | 4_1:-77126640 | None:intergenic |
| AGTACCATAAGCCACAACGA+AGG | 0.749652 | 4_1:-77125442 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATATGTTCTTAATTAA+TGG | - | chr4_1:77127420-77127439 | None:intergenic | 10.0% |
| !! | AAATATAAATTTAAGTCAAT+AGG | - | chr4_1:77127574-77127593 | None:intergenic | 10.0% |
| !! | TTTAGGAATATTATTTAATA+AGG | - | chr4_1:77127910-77127929 | None:intergenic | 10.0% |
| !!! | TTTAAATTTAAAATTAGTAG+TGG | + | chr4_1:77128186-77128205 | Msa0573830:intron | 10.0% |
| !!! | TATATATTTTTAAGTAGAAA+TGG | - | chr4_1:77128551-77128570 | None:intergenic | 10.0% |
| !! | AACTAGAATTATAATTGAAT+AGG | - | chr4_1:77125591-77125610 | None:intergenic | 15.0% |
| !!! | ATGAAAATCTCTTTTAAATT+GGG | - | chr4_1:77125973-77125992 | None:intergenic | 15.0% |
| !!! | TATGAAAATCTCTTTTAAAT+TGG | - | chr4_1:77125974-77125993 | None:intergenic | 15.0% |
| !!! | ATTTAAAAGAGATTTTCATA+TGG | + | chr4_1:77125974-77125993 | Msa0573830:CDS | 15.0% |
| !! | TTGAAATAAAATGTAAAAGA+GGG | - | chr4_1:77126053-77126072 | None:intergenic | 15.0% |
| !!! | TTTGAAATAAAATGTAAAAG+AGG | - | chr4_1:77126054-77126073 | None:intergenic | 15.0% |
| !!! | TTTTTTTAACAAATTGTTCA+TGG | + | chr4_1:77126224-77126243 | Msa0573830:intron | 15.0% |
| !!! | TTTTTTAACAAATTGTTCAT+GGG | + | chr4_1:77126225-77126244 | Msa0573830:intron | 15.0% |
| !!! | CAATGTAAACAAATATTTTA+TGG | + | chr4_1:77126321-77126340 | Msa0573830:intron | 15.0% |
| !!! | GATAGATTACTTTTATAATT+TGG | - | chr4_1:77126368-77126387 | None:intergenic | 15.0% |
| !!! | ATATTTTACTATGTTTTATG+TGG | + | chr4_1:77127653-77127672 | Msa0573830:intron | 15.0% |
| !! | ATACTAATTAACAATTGAAT+TGG | - | chr4_1:77128137-77128156 | None:intergenic | 15.0% |
| !!! | AACACATAAAACTTTTAAAT+AGG | - | chr4_1:77128292-77128311 | None:intergenic | 15.0% |
| !! | CTACTTAAAAATATATATCA+TGG | + | chr4_1:77128554-77128573 | Msa0573830:intron | 15.0% |
| !!! | ATCATATAGTCTTACAAATT+TGG | + | chr4_1:77125775-77125794 | Msa0573830:intron | 20.0% |
| !!! | TTTTATACTTTTGTTCACAT+TGG | + | chr4_1:77125833-77125852 | Msa0573830:intron | 20.0% |
| !!! | AAAATTCTTATTTGTCTGAA+GGG | + | chr4_1:77126071-77126090 | Msa0573830:intron | 20.0% |
| !!! | TATAAGGACTTTTTTTTAAG+AGG | + | chr4_1:77126417-77126436 | Msa0573830:intron | 20.0% |
| !! | AACAGCACAATTATTATAAA+GGG | - | chr4_1:77126477-77126496 | None:intergenic | 20.0% |
| !! | GTTTATGATCTTATAAATTC+AGG | + | chr4_1:77126896-77126915 | Msa0573830:CDS | 20.0% |
| !! | AATATTATGATGTACTATAG+TGG | + | chr4_1:77127175-77127194 | Msa0573830:intron | 20.0% |
| !! | TTTAAACTTCAACAAAATTG+TGG | + | chr4_1:77127292-77127311 | Msa0573830:intron | 20.0% |
| !!! | ATTATTTTTCTTTGCTTTTC+AGG | + | chr4_1:77128363-77128382 | Msa0573830:intron | 20.0% |
| !!! | TTATTTTTCTTTGCTTTTCA+GGG | + | chr4_1:77128364-77128383 | Msa0573830:intron | 20.0% |
| !!! | ATATTTTTAAGTAGAAATGG+TGG | - | chr4_1:77128548-77128567 | None:intergenic | 20.0% |
| !! | TATATATCATGGTTATTTAC+AGG | + | chr4_1:77128565-77128584 | Msa0573830:intron | 20.0% |
| !!! | CAAGTATTTAACTTTCTTAT+TGG | + | chr4_1:77128709-77128728 | Msa0573830:CDS | 20.0% |
| !!! | GATTTTGAGCAAAATTTAAT+TGG | - | chr4_1:77128920-77128939 | None:intergenic | 20.0% |
| !! | ATGTAAAAGCAATATTAAAG+TGG | + | chr4_1:77129052-77129071 | Msa0573830:three_prime_UTR | 20.0% |
| ! | TGATATCTCATAAAACATTC+TGG | - | chr4_1:77125759-77125778 | None:intergenic | 25.0% |
| !! | ATATAGTCTTACAAATTTGG+TGG | + | chr4_1:77125778-77125797 | Msa0573830:intron | 25.0% |
| !!! | ATTGTTGATTCTACTAGAAA+AGG | + | chr4_1:77125879-77125898 | Msa0573830:CDS | 25.0% |
| ! | AAATAAAATGTAAAAGAGGG+AGG | - | chr4_1:77126050-77126069 | None:intergenic | 25.0% |
| !! | CAAAATTCTTATTTGTCTGA+AGG | + | chr4_1:77126070-77126089 | Msa0573830:intron | 25.0% |
| !! | AACAAAGCAAAGCTTTTATA+AGG | + | chr4_1:77126401-77126420 | Msa0573830:intron | 25.0% |
| ! | CAACAGCACAATTATTATAA+AGG | - | chr4_1:77126478-77126497 | None:intergenic | 25.0% |
| ! | TACTTCATTTAACCATATGA+CGG | - | chr4_1:77126696-77126715 | None:intergenic | 25.0% |
| ! | TATATAATTCCAGCTAAACT+CGG | - | chr4_1:77126810-77126829 | None:intergenic | 25.0% |
| !!! | TTGAAGATTCTGAAATTTCT+TGG | + | chr4_1:77127083-77127102 | Msa0573830:CDS | 25.0% |
| ! | TTAGTGTTCTAACAAAATCA+TGG | - | chr4_1:77127323-77127342 | None:intergenic | 25.0% |
| ! | ATGCATATAGTGATTTACAT+TGG | + | chr4_1:77127460-77127479 | Msa0573830:intron | 25.0% |
| ! | TGCATATAGTGATTTACATT+GGG | + | chr4_1:77127461-77127480 | Msa0573830:intron | 25.0% |
| ! | AAATTTAAGTCAATAGGACT+AGG | - | chr4_1:77127568-77127587 | None:intergenic | 25.0% |
| ! | ATTCAATATGCAATCAACAT+CGG | - | chr4_1:77127714-77127733 | None:intergenic | 25.0% |
| !!! | GCACTGATTTTAATTTTTCA+TGG | + | chr4_1:77127858-77127877 | Msa0573830:intron | 25.0% |
| !! | TTTTCTACTAATAGTTGACT+AGG | + | chr4_1:77128028-77128047 | Msa0573830:intron | 25.0% |
| !!! | TATTTTTCTTTGCTTTTCAG+GGG | + | chr4_1:77128365-77128384 | Msa0573830:intron | 25.0% |
| ! | ATGTCACTATTTGATGAAAA+AGG | + | chr4_1:77128423-77128442 | Msa0573830:CDS | 25.0% |
| !! | GTATTTAACTTTCTTATTGG+CGG | + | chr4_1:77128712-77128731 | Msa0573830:CDS | 25.0% |
| !! | GTCTTGATTTTTGTATACAT+AGG | + | chr4_1:77128815-77128834 | Msa0573830:three_prime_UTR | 25.0% |
| ! | TAATTATGAATTCCATGTTG+AGG | - | chr4_1:77128877-77128896 | None:intergenic | 25.0% |
| !! | CTTTTACATTTCATTCAAAC+TGG | - | chr4_1:77129041-77129060 | None:intergenic | 25.0% |
| ! | TATCAAGATTCTGTTTTCGT+TGG | + | chr4_1:77125377-77125396 | Msa0573830:CDS | 30.0% |
| TTGGTGAAATCTCTCAATTA+TGG | + | chr4_1:77125396-77125415 | Msa0573830:CDS | 30.0% | |
| ! | ATTTGAAGTAACAAGTGGAA+TGG | - | chr4_1:77125478-77125497 | None:intergenic | 30.0% |
| AATCAAAGGACGAATTTGAT+AGG | - | chr4_1:77125625-77125644 | None:intergenic | 30.0% | |
| ATTCGTCCTTTGATTCTATA+AGG | + | chr4_1:77125630-77125649 | Msa0573830:intron | 30.0% | |
| TGCCATAATGAATAGACAAA+AGG | + | chr4_1:77125710-77125729 | Msa0573830:intron | 30.0% | |
| GCCATAATGAATAGACAAAA+GGG | + | chr4_1:77125711-77125730 | Msa0573830:intron | 30.0% | |
| TTAAGAACACAAGTCCATAT+GGG | - | chr4_1:77125939-77125958 | None:intergenic | 30.0% | |
| ATTAAGAACACAAGTCCATA+TGG | - | chr4_1:77125940-77125959 | None:intergenic | 30.0% | |
| ATAGTACACGCATATTACAA+TGG | - | chr4_1:77126259-77126278 | None:intergenic | 30.0% | |
| !!! | CTTTGCTTTGTTTTTAGTCA+TGG | - | chr4_1:77126393-77126412 | None:intergenic | 30.0% |
| ! | AATTGAAGCCTTTTCTGTTA+GGG | - | chr4_1:77126561-77126580 | None:intergenic | 30.0% |
| TTTAGCTGGAATTATATACC+AGG | + | chr4_1:77126812-77126831 | Msa0573830:CDS | 30.0% | |
| TAAACATGATTCCAAAAGAG+AGG | - | chr4_1:77126881-77126900 | None:intergenic | 30.0% | |
| GTTGCAGATATTGTTGAAAA+GGG | + | chr4_1:77126941-77126960 | Msa0573830:CDS | 30.0% | |
| AGATATTGTTGAAAAGGGTA+GGG | + | chr4_1:77126946-77126965 | Msa0573830:CDS | 30.0% | |
| AGTGATTTAACTCTAATCTG+AGG | - | chr4_1:77127001-77127020 | None:intergenic | 30.0% | |
| TTCAGAATCTTCAAAAGACT+TGG | - | chr4_1:77127077-77127096 | None:intergenic | 30.0% | |
| !! | AGATTCTGAAATTTCTTGGT+TGG | + | chr4_1:77127087-77127106 | Msa0573830:CDS | 30.0% |
| !! | GATTCTGAAATTTCTTGGTT+GGG | + | chr4_1:77127088-77127107 | Msa0573830:CDS | 30.0% |
| ! | TGCAACTTTTGCTAAAATTG+TGG | - | chr4_1:77127270-77127289 | None:intergenic | 30.0% |
| TAGAGAGAAAATTTCAAAGC+AGG | + | chr4_1:77127492-77127511 | Msa0573830:intron | 30.0% | |
| ATCAAAAGATATACTACCTC+TGG | - | chr4_1:77127537-77127556 | None:intergenic | 30.0% | |
| TTGTGATTAGCAACATGATT+GGG | + | chr4_1:77127619-77127638 | Msa0573830:intron | 30.0% | |
| AGTAGTGAATTCATGCAATT+TGG | - | chr4_1:77128066-77128085 | None:intergenic | 30.0% | |
| ATTCCACATATGTGAGAAAT+TGG | - | chr4_1:77128498-77128517 | None:intergenic | 30.0% | |
| ! | TTTACAGGTACTTTTGATGA+TGG | + | chr4_1:77128580-77128599 | Msa0573830:intron | 30.0% |
| !! | TTACAGGTACTTTTGATGAT+GGG | + | chr4_1:77128581-77128600 | Msa0573830:intron | 30.0% |
| CATAATTATACTCTGATCTC+TGG | + | chr4_1:77128889-77128908 | Msa0573830:three_prime_UTR | 30.0% | |
| CATAATTATACTCTGATCTC+TGG | + | chr4_1:77128889-77128908 | Msa0573830:three_prime_UTR | 30.0% | |
| TTTATACATCCATGTTGTCA+AGG | + | chr4_1:77128968-77128987 | Msa0573830:three_prime_UTR | 30.0% | |
| GTAACAAGTGGAATGGAAAT+TGG | - | chr4_1:77125471-77125490 | None:intergenic | 35.0% | |
| AGTGGAGAAAGAACAATTGT+TGG | - | chr4_1:77125516-77125535 | None:intergenic | 35.0% | |
| ! | AGAGCACCTTATAGAATCAA+AGG | - | chr4_1:77125639-77125658 | None:intergenic | 35.0% |
| ! | GCCCTTTTGTCTATTCATTA+TGG | - | chr4_1:77125715-77125734 | None:intergenic | 35.0% |
| GTGATTCTTACACTCAATTG+TGG | - | chr4_1:77126014-77126033 | None:intergenic | 35.0% | |
| CAAATTGTTCATGGGTGAAT+TGG | + | chr4_1:77126233-77126252 | Msa0573830:intron | 35.0% | |
| ! | ATTGAAGCCTTTTCTGTTAG+GGG | - | chr4_1:77126560-77126579 | None:intergenic | 35.0% |
| ! | CAATTGAAGCCTTTTCTGTT+AGG | - | chr4_1:77126562-77126581 | None:intergenic | 35.0% |
| AACAGAAAAGGCTTCAATTG+AGG | + | chr4_1:77126562-77126581 | Msa0573830:CDS | 35.0% | |
| ACTCAACAATTGAAAGCAAG+TGG | + | chr4_1:77126602-77126621 | Msa0573830:CDS | 35.0% | |
| !! | GTTTTCTGAGAAATCCATAG+AGG | - | chr4_1:77126674-77126693 | None:intergenic | 35.0% |
| TTTCTCAGAAAACCGTCATA+TGG | + | chr4_1:77126681-77126700 | Msa0573830:CDS | 35.0% | |
| ! | ATGATGAAGAAAGTTGGTCT+AGG | + | chr4_1:77126843-77126862 | Msa0573830:CDS | 35.0% |
| ! | TGATGAAGAAAGTTGGTCTA+GGG | + | chr4_1:77126844-77126863 | Msa0573830:CDS | 35.0% |
| GGTTGCAGATATTGTTGAAA+AGG | + | chr4_1:77126940-77126959 | Msa0573830:CDS | 35.0% | |
| CAGATATTGTTGAAAAGGGT+AGG | + | chr4_1:77126945-77126964 | Msa0573830:CDS | 35.0% | |
| TTGGTTGGGTTCTACTAATT+TGG | + | chr4_1:77127102-77127121 | Msa0573830:CDS | 35.0% | |
| GTGTTCTAACAAAATCATGG+TGG | - | chr4_1:77127320-77127339 | None:intergenic | 35.0% | |
| GAGCAATTTCGTACATAAGT+AGG | - | chr4_1:77127359-77127378 | None:intergenic | 35.0% | |
| ATAATTAGTACTAGAGCCAG+AGG | + | chr4_1:77127518-77127537 | Msa0573830:intron | 35.0% | |
| CTTGTGATTAGCAACATGAT+TGG | + | chr4_1:77127618-77127637 | Msa0573830:intron | 35.0% | |
| ATATCTGCATCTTCCAATTG+TGG | + | chr4_1:77127778-77127797 | Msa0573830:CDS | 35.0% | |
| CACTTCATACTAACCACAAT+TGG | - | chr4_1:77127794-77127813 | None:intergenic | 35.0% | |
| CAATTGTGGTTAGTATGAAG+TGG | + | chr4_1:77127792-77127811 | Msa0573830:intron | 35.0% | |
| ! | GTATACGCTTTGAATTCTCT+CGG | + | chr4_1:77127994-77128013 | Msa0573830:intron | 35.0% |
| TCACTACTTGTGTTGTGTTA+AGG | + | chr4_1:77128078-77128097 | Msa0573830:intron | 35.0% | |
| GCACAACAAAGACTCAAATA+TGG | - | chr4_1:77128233-77128252 | None:intergenic | 35.0% | |
| CATCCAATTTCTCACATATG+TGG | + | chr4_1:77128492-77128511 | Msa0573830:intron | 35.0% | |
| TAAGTAGAAATGGTGGTTGA+TGG | - | chr4_1:77128541-77128560 | None:intergenic | 35.0% | |
| ATCCAACACATGTCACTAAA+TGG | + | chr4_1:77128614-77128633 | Msa0573830:CDS | 35.0% | |
| TCCAACACATGTCACTAAAT+GGG | + | chr4_1:77128615-77128634 | Msa0573830:CDS | 35.0% | |
| CTAAATGGGATATGAGAAGA+CGG | + | chr4_1:77128629-77128648 | Msa0573830:CDS | 35.0% | |
| AAAATGCATTCTTCAAACGC+AGG | + | chr4_1:77128735-77128754 | Msa0573830:CDS | 35.0% | |
| TCTAGAGAGAGAGAGAGATT+TGG | + | chr4_1:77125249-77125268 | Msa0573830:five_prime_UTR | 40.0% | |
| ATTTGGATGGAGGTTTCAGA+GGG | + | chr4_1:77125266-77125285 | Msa0573830:exon | 40.0% | |
| ! | GGTGGATTTGAAGTAACAAG+TGG | - | chr4_1:77125483-77125502 | None:intergenic | 40.0% |
| ! | TGTTACTTCAAATCCACCGA+TGG | + | chr4_1:77125485-77125504 | Msa0573830:CDS | 40.0% |
| ACAATTGTTGGTGTGACCAT+CGG | - | chr4_1:77125504-77125523 | None:intergenic | 40.0% | |
| GGATTGTTGTCGAATAGTAC+CGG | - | chr4_1:77125570-77125589 | None:intergenic | 40.0% | |
| AAAAGGGCAAAAGTGAGTCA+TGG | + | chr4_1:77125727-77125746 | Msa0573830:intron | 40.0% | |
| ! | TTCACATTGGTAGCACAGAA+AGG | + | chr4_1:77125846-77125865 | Msa0573830:intron | 40.0% |
| TGTCCAAAACCATACCCATA+TGG | + | chr4_1:77125922-77125941 | Msa0573830:CDS | 40.0% | |
| ! | AGTCCATATGGGTATGGTTT+TGG | - | chr4_1:77125928-77125947 | None:intergenic | 40.0% |
| AACACAAGTCCATATGGGTA+TGG | - | chr4_1:77125934-77125953 | None:intergenic | 40.0% | |
| ! | ATCAGAGTCCTCCTGTTTTA+CGG | - | chr4_1:77126504-77126523 | None:intergenic | 40.0% |
| TAAAACAGGAGGACTCTGAT+TGG | + | chr4_1:77126504-77126523 | Msa0573830:intron | 40.0% | |
| AAAACAGGAGGACTCTGATT+GGG | + | chr4_1:77126505-77126524 | Msa0573830:intron | 40.0% | |
| !! | TTCAATTGAGGAGCACTTAG+AGG | + | chr4_1:77126574-77126593 | Msa0573830:CDS | 40.0% |
| TTTCTTCAAGGAAGCAGAGA+GGG | - | chr4_1:77126642-77126661 | None:intergenic | 40.0% | |
| AGGACGTAATGGTTTCTTCA+AGG | - | chr4_1:77126654-77126673 | None:intergenic | 40.0% | |
| AGAAACCATTACGTCCTCTA+TGG | + | chr4_1:77126657-77126676 | Msa0573830:CDS | 40.0% | |
| GAAATCCATAGAGGACGTAA+TGG | - | chr4_1:77126665-77126684 | None:intergenic | 40.0% | |
| AAGTACCTCACCATGATTCT+TGG | + | chr4_1:77126711-77126730 | Msa0573830:CDS | 40.0% | |
| AGTACCTCACCATGATTCTT+GGG | + | chr4_1:77126712-77126731 | Msa0573830:CDS | 40.0% | |
| AAATCCCAAGAATCATGGTG+AGG | - | chr4_1:77126719-77126738 | None:intergenic | 40.0% | |
| GTGTGAAATCCCAAGAATCA+TGG | - | chr4_1:77126724-77126743 | None:intergenic | 40.0% | |
| GAAGCAGAGACAAGTATGAT+TGG | - | chr4_1:77126746-77126765 | None:intergenic | 40.0% | |
| TGGAATTATATACCAGGTGC+AGG | + | chr4_1:77126818-77126837 | Msa0573830:CDS | 40.0% | |
| CAGGAGATGATGAAGAAAGT+TGG | + | chr4_1:77126837-77126856 | Msa0573830:CDS | 40.0% | |
| ! | GATGAAGAAAGTTGGTCTAG+GGG | + | chr4_1:77126845-77126864 | Msa0573830:CDS | 40.0% |
| ! | GTTTAACTCCACCTCTCTTT+TGG | + | chr4_1:77126867-77126886 | Msa0573830:CDS | 40.0% |
| ACATGATTCCAAAAGAGAGG+TGG | - | chr4_1:77126878-77126897 | None:intergenic | 40.0% | |
| CAACAATATCTGCAACCTTC+TGG | - | chr4_1:77126937-77126956 | None:intergenic | 40.0% | |
| GGTTCTACTAATTTGGCAGT+TGG | + | chr4_1:77127109-77127128 | Msa0573830:CDS | 40.0% | |
| TTGCCACATGTTTCGATTGA+TGG | + | chr4_1:77127216-77127235 | Msa0573830:intron | 40.0% | |
| TCACCATCAATCGAAACATG+TGG | - | chr4_1:77127222-77127241 | None:intergenic | 40.0% | |
| GTTGCTAATCACAAGTAGAC+TGG | - | chr4_1:77127613-77127632 | None:intergenic | 40.0% | |
| TGCAGATATGCTTCTGAACT+GGG | - | chr4_1:77127767-77127786 | None:intergenic | 40.0% | |
| ATGCAGATATGCTTCTGAAC+TGG | - | chr4_1:77127768-77127787 | None:intergenic | 40.0% | |
| !! | CAACGCTTCTTGTTGTTGAA+TGG | + | chr4_1:77127818-77127837 | Msa0573830:intron | 40.0% |
| CTTCTGGTCTGTTGTAATGA+TGG | + | chr4_1:77127972-77127991 | Msa0573830:CDS | 40.0% | |
| ATCCTTCTAAATCATTCCGC+TGG | + | chr4_1:77128262-77128281 | Msa0573830:intron | 40.0% | |
| ! | CTTTTAAATAGGTCGTCCAG+CGG | - | chr4_1:77128281-77128300 | None:intergenic | 40.0% |
| AGTGACATGTGTTGGATTGA+AGG | - | chr4_1:77128611-77128630 | None:intergenic | 40.0% | |
| TCCCATTTAGTGACATGTGT+TGG | - | chr4_1:77128619-77128638 | None:intergenic | 40.0% | |
| ACATCAATTGTGCCTCAACA+TGG | + | chr4_1:77128862-77128881 | Msa0573830:three_prime_UTR | 40.0% | |
| GAGAGAGAGAGAGATTTGGA+TGG | + | chr4_1:77125253-77125272 | Msa0573830:exon | 45.0% | |
| AGAGAGAGAGATTTGGATGG+AGG | + | chr4_1:77125256-77125275 | Msa0573830:exon | 45.0% | |
| GATTTGGATGGAGGTTTCAG+AGG | + | chr4_1:77125265-77125284 | Msa0573830:exon | 45.0% | |
| TTTGCGAGAAGAGGAAGTTG+AGG | - | chr4_1:77125422-77125441 | None:intergenic | 45.0% | |
| CAAACCTTCGTTGTGGCTTA+TGG | + | chr4_1:77125438-77125457 | Msa0573830:CDS | 45.0% | |
| AGTACCATAAGCCACAACGA+AGG | - | chr4_1:77125445-77125464 | None:intergenic | 45.0% | |
| ! | ACATTGGTAGCACAGAAAGG+TGG | + | chr4_1:77125849-77125868 | Msa0573830:intron | 45.0% |
| !!! | TGGTTTTGGACATGCTGTCT+GGG | - | chr4_1:77125914-77125933 | None:intergenic | 45.0% |
| !!! | ATGGTTTTGGACATGCTGTC+TGG | - | chr4_1:77125915-77125934 | None:intergenic | 45.0% |
| CTCTTTGCACCTACCACTTT+GGG | + | chr4_1:77126532-77126551 | Msa0573830:CDS | 45.0% | |
| TTGGGTTCCCCTAACAGAAA+AGG | + | chr4_1:77126550-77126569 | Msa0573830:CDS | 45.0% | |
| !! | TTGAGGAGCACTTAGAGGAA+TGG | + | chr4_1:77126579-77126598 | Msa0573830:CDS | 45.0% |
| GTTTCTTCAAGGAAGCAGAG+AGG | - | chr4_1:77126643-77126662 | None:intergenic | 45.0% | |
| TCTGCTTCTTCTTCGTCGAA+CGG | + | chr4_1:77126758-77126777 | Msa0573830:CDS | 45.0% | |
| !! | CGGAGTTAGTCTTGTTGTGT+TGG | - | chr4_1:77126790-77126809 | None:intergenic | 45.0% |
| AGACTAACTCCGAGTTTAGC+TGG | + | chr4_1:77126798-77126817 | Msa0573830:CDS | 45.0% | |
| TCCTGATGTGTGTAACCAGA+AGG | + | chr4_1:77126919-77126938 | Msa0573830:CDS | 45.0% | |
| ! | ACCTTCTGGTTACACACATC+AGG | - | chr4_1:77126923-77126942 | None:intergenic | 45.0% |
| CACTCTCTCCTCTATAAGCA+CGG | - | chr4_1:77126976-77126995 | None:intergenic | 45.0% | |
| TTCACATGAAGAACCGTCAC+TGG | + | chr4_1:77127021-77127040 | Msa0573830:CDS | 45.0% | |
| GAAACATCAGAAGCCAGTGA+CGG | - | chr4_1:77127037-77127056 | None:intergenic | 45.0% | |
| ! | GCAGTTGGTGCATCTCAATT+TGG | + | chr4_1:77127124-77127143 | Msa0573830:CDS | 45.0% |
| !! | TCACAAGTAGACTGGTCTTC+TGG | - | chr4_1:77127605-77127624 | None:intergenic | 45.0% |
| GTCCAGCGGAATGATTTAGA+AGG | - | chr4_1:77128267-77128286 | None:intergenic | 45.0% | |
| GACCATGCAGAGGAAATTTG+AGG | + | chr4_1:77128686-77128705 | Msa0573830:CDS | 45.0% | |
| TGCCTCAAATTTCCTCTGCA+TGG | - | chr4_1:77128691-77128710 | None:intergenic | 45.0% | |
| ATGCATTCTTCAAACGCAGG+AGG | + | chr4_1:77128738-77128757 | Msa0573830:CDS | 45.0% | |
| ATTCTTCAAACGCAGGAGGA+CGG | + | chr4_1:77128742-77128761 | Msa0573830:CDS | 45.0% | |
| ACATCCATGTTGTCAAGGCA+CGG | + | chr4_1:77128973-77128992 | Msa0573830:three_prime_UTR | 45.0% | |
| CAACGAAGGTTTGCGAGAAG+AGG | - | chr4_1:77125431-77125450 | None:intergenic | 50.0% | |
| CTTCTCGCAAACCTTCGTTG+TGG | + | chr4_1:77125431-77125450 | Msa0573830:CDS | 50.0% | |
| ATTGTTGGTGTGACCATCGG+TGG | - | chr4_1:77125501-77125520 | None:intergenic | 50.0% | |
| ATGAAGGTTGAGACGAGCAG+TGG | - | chr4_1:77125534-77125553 | None:intergenic | 50.0% | |
| TGCTCGTCTCAACCTTCATG+TGG | + | chr4_1:77125535-77125554 | Msa0573830:CDS | 50.0% | |
| CTTCATGTGGCTCATCTTGC+CGG | + | chr4_1:77125548-77125567 | Msa0573830:CDS | 50.0% | |
| TGCTGTTGCCTCCGTAAAAC+AGG | + | chr4_1:77126490-77126509 | Msa0573830:intron | 50.0% | |
| TGTTGCCTCCGTAAAACAGG+AGG | + | chr4_1:77126493-77126512 | Msa0573830:intron | 50.0% | |
| ! | AGAGTCCTCCTGTTTTACGG+AGG | - | chr4_1:77126501-77126520 | None:intergenic | 50.0% |
| GCTCTTTGCACCTACCACTT+TGG | + | chr4_1:77126531-77126550 | Msa0573830:CDS | 50.0% | |
| TTAGGGGAACCCAAAGTGGT+AGG | - | chr4_1:77126544-77126563 | None:intergenic | 50.0% | |
| TCTGTTAGGGGAACCCAAAG+TGG | - | chr4_1:77126548-77126567 | None:intergenic | 50.0% | |
| TCTTCATCATCTCCTGCACC+TGG | - | chr4_1:77126833-77126852 | None:intergenic | 50.0% | |
| ACTGGGAAGACAGACAGTGA+TGG | - | chr4_1:77127750-77127769 | None:intergenic | 50.0% | |
| TTGGCGAAGCTCACAGCTTT+AGG | - | chr4_1:77127927-77127946 | None:intergenic | 50.0% | |
| GCCAAGTTCAACCTCAGTCT+GGG | + | chr4_1:77127942-77127961 | Msa0573830:CDS | 50.0% | |
| TCCCAGACTGAGGTTGAACT+TGG | - | chr4_1:77127946-77127965 | None:intergenic | 50.0% | |
| !! | GAAGTCGTTTTCCCAGACTG+AGG | - | chr4_1:77127956-77127975 | None:intergenic | 50.0% |
| CAGTCTGGGAAAACGACTTC+TGG | + | chr4_1:77127956-77127975 | Msa0573830:CDS | 50.0% | |
| ACAAATGCACGACCATGCAG+AGG | + | chr4_1:77128676-77128695 | Msa0573830:CDS | 50.0% | |
| ACTACCGTGCCTTGACAACA+TGG | - | chr4_1:77128980-77128999 | None:intergenic | 50.0% | |
| CGGCAAGATGAGCCACATGA+AGG | - | chr4_1:77125550-77125569 | None:intergenic | 55.0% | |
| AGGGTACGCCGTGCTTATAG+AGG | + | chr4_1:77126965-77126984 | Msa0573830:CDS | 55.0% | |
| CGCCAAGTTCAACCTCAGTC+TGG | + | chr4_1:77127941-77127960 | Msa0573830:CDS | 55.0% | |
| TCAAACGCAGGAGGACGGTG+AGG | + | chr4_1:77128747-77128766 | Msa0573830:CDS | 60.0% | |
| ACGCAGGAGGACGGTGAGGA+CGG | + | chr4_1:77128751-77128770 | Msa0573830:CDS | 65.0% | |
| CAGGAGGACGGTGAGGACGG+TGG | + | chr4_1:77128754-77128773 | Msa0573830:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 77125207 | 77129076 | 77125207 | ID=Msa0573830;Name=Msa0573830 |
| chr4_1 | mRNA | 77125207 | 77129076 | 77125207 | ID=Msa0573830-mRNA-1;Parent=Msa0573830;Name=Msa0573830-mRNA-1;_AED=0.07;_eAED=0.07;_QI=65|1|1|1|0.85|0.75|8|231|522 |
| chr4_1 | exon | 77125207 | 77125569 | 77125207 | ID=Msa0573830-mRNA-1:exon:27085;Parent=Msa0573830-mRNA-1 |
| chr4_1 | exon | 77125859 | 77126022 | 77125859 | ID=Msa0573830-mRNA-1:exon:27086;Parent=Msa0573830-mRNA-1 |
| chr4_1 | exon | 77126512 | 77127145 | 77126512 | ID=Msa0573830-mRNA-1:exon:27087;Parent=Msa0573830-mRNA-1 |
| chr4_1 | exon | 77127699 | 77127799 | 77127699 | ID=Msa0573830-mRNA-1:exon:27088;Parent=Msa0573830-mRNA-1 |
| chr4_1 | exon | 77127885 | 77127993 | 77127885 | ID=Msa0573830-mRNA-1:exon:27089;Parent=Msa0573830-mRNA-1 |
| chr4_1 | exon | 77128385 | 77128444 | 77128385 | ID=Msa0573830-mRNA-1:exon:27090;Parent=Msa0573830-mRNA-1 |
| chr4_1 | exon | 77128587 | 77128910 | 77128587 | ID=Msa0573830-mRNA-1:exon:27091;Parent=Msa0573830-mRNA-1 |
| chr4_1 | exon | 77128967 | 77129076 | 77128967 | ID=Msa0573830-mRNA-1:exon:27092;Parent=Msa0573830-mRNA-1 |
| chr4_1 | five_prime_UTR | 77125207 | 77125271 | 77125207 | ID=Msa0573830-mRNA-1:five_prime_utr;Parent=Msa0573830-mRNA-1 |
| chr4_1 | CDS | 77125272 | 77125569 | 77125272 | ID=Msa0573830-mRNA-1:cds;Parent=Msa0573830-mRNA-1 |
| chr4_1 | CDS | 77125859 | 77126022 | 77125859 | ID=Msa0573830-mRNA-1:cds;Parent=Msa0573830-mRNA-1 |
| chr4_1 | CDS | 77126512 | 77127145 | 77126512 | ID=Msa0573830-mRNA-1:cds;Parent=Msa0573830-mRNA-1 |
| chr4_1 | CDS | 77127699 | 77127799 | 77127699 | ID=Msa0573830-mRNA-1:cds;Parent=Msa0573830-mRNA-1 |
| chr4_1 | CDS | 77127885 | 77127993 | 77127885 | ID=Msa0573830-mRNA-1:cds;Parent=Msa0573830-mRNA-1 |
| chr4_1 | CDS | 77128385 | 77128444 | 77128385 | ID=Msa0573830-mRNA-1:cds;Parent=Msa0573830-mRNA-1 |
| chr4_1 | CDS | 77128587 | 77128789 | 77128587 | ID=Msa0573830-mRNA-1:cds;Parent=Msa0573830-mRNA-1 |
| chr4_1 | three_prime_UTR | 77128790 | 77128910 | 77128790 | ID=Msa0573830-mRNA-1:three_prime_utr;Parent=Msa0573830-mRNA-1 |
| chr4_1 | three_prime_UTR | 77128967 | 77129076 | 77128967 | ID=Msa0573830-mRNA-1:three_prime_utr;Parent=Msa0573830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
