Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0583710 | XP_013444645.1 | 99.707 | 341 | 1 | 0 | 1 | 341 | 1 | 341 | 0.0 | 697 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0225880 | Msa0583710 | 0.807918 | 3.997542e-50 | -8.615850e-47 |
| Msa0260470 | Msa0583710 | 0.807136 | 5.858377e-50 | -8.615850e-47 |
| Msa0304110 | Msa0583710 | 0.805848 | 1.094701e-49 | -8.615850e-47 |
| Msa0341190 | Msa0583710 | 0.802113 | 6.544888e-49 | -8.615850e-47 |
| Msa0583710 | Msa1245780 | 0.860445 | 2.056017e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0583710 | MtrunA17_Chr8g0347131 | 99.707 | 341 | 1 | 0 | 1 | 341 | 1 | 341 | 0.0 | 697 |
| Msa0583710 | MtrunA17_Chr1g0171941 | 38.820 | 322 | 147 | 13 | 43 | 338 | 2 | 299 | 5.66e-45 | 155 |
| Msa0583710 | MtrunA17_Chr7g0256541 | 51.613 | 93 | 44 | 1 | 66 | 158 | 1 | 92 | 1.70e-22 | 97.8 |
| Msa0583710 | MtrunA17_Chr8g0368511 | 50.000 | 54 | 27 | 0 | 55 | 108 | 50 | 103 | 1.24e-12 | 63.9 |
| Msa0583710 | MtrunA17_Chr7g0222601 | 48.148 | 54 | 28 | 0 | 55 | 108 | 16 | 69 | 4.43e-11 | 59.3 |
| Msa0583710 | MtrunA17_Chr1g0212831 | 42.857 | 63 | 36 | 0 | 55 | 117 | 11 | 73 | 4.73e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0583710 | AT2G46420.2 | 71.758 | 347 | 88 | 4 | 4 | 343 | 1 | 344 | 4.35e-178 | 497 |
| Msa0583710 | AT2G46420.3 | 71.884 | 345 | 87 | 4 | 4 | 341 | 1 | 342 | 2.69e-176 | 493 |
| Msa0583710 | AT2G46420.1 | 71.884 | 345 | 87 | 4 | 4 | 341 | 1 | 342 | 2.69e-176 | 493 |
| Msa0583710 | AT3G61700.1 | 71.143 | 350 | 81 | 7 | 1 | 341 | 1 | 339 | 3.17e-171 | 481 |
| Msa0583710 | AT3G61700.3 | 71.143 | 350 | 81 | 7 | 1 | 341 | 1 | 339 | 3.17e-171 | 481 |
| Msa0583710 | AT3G61700.4 | 71.221 | 344 | 79 | 7 | 7 | 341 | 5 | 337 | 5.17e-169 | 475 |
| Msa0583710 | AT3G61700.2 | 70.141 | 355 | 81 | 8 | 1 | 341 | 1 | 344 | 1.02e-168 | 474 |
| Msa0583710 | AT3G10250.2 | 39.809 | 314 | 164 | 10 | 43 | 345 | 2 | 301 | 5.75e-49 | 167 |
| Msa0583710 | AT3G10250.5 | 39.809 | 314 | 164 | 10 | 43 | 345 | 2 | 301 | 5.75e-49 | 167 |
| Msa0583710 | AT3G10250.1 | 39.809 | 314 | 164 | 10 | 43 | 345 | 2 | 301 | 5.75e-49 | 167 |
| Msa0583710 | AT3G10250.4 | 39.809 | 314 | 164 | 10 | 43 | 345 | 2 | 301 | 5.75e-49 | 167 |
| Msa0583710 | AT5G04090.6 | 37.742 | 310 | 166 | 7 | 34 | 338 | 10 | 297 | 2.36e-48 | 166 |
| Msa0583710 | AT5G04090.2 | 38.514 | 296 | 155 | 7 | 48 | 338 | 7 | 280 | 3.89e-48 | 164 |
| Msa0583710 | AT3G10250.3 | 38.889 | 306 | 158 | 9 | 43 | 332 | 2 | 294 | 1.73e-45 | 157 |
| Msa0583710 | AT5G04090.4 | 35.036 | 274 | 151 | 7 | 70 | 338 | 1 | 252 | 1.18e-32 | 123 |
| Msa0583710 | AT5G04090.7 | 35.036 | 274 | 151 | 7 | 70 | 338 | 1 | 252 | 1.18e-32 | 123 |
| Msa0583710 | AT5G04090.3 | 31.873 | 251 | 144 | 7 | 93 | 338 | 11 | 239 | 1.57e-20 | 90.1 |
| Msa0583710 | AT5G04090.5 | 31.873 | 251 | 144 | 7 | 93 | 338 | 11 | 239 | 1.57e-20 | 90.1 |
| Msa0583710 | AT5G04090.1 | 31.873 | 251 | 144 | 7 | 93 | 338 | 11 | 239 | 1.57e-20 | 90.1 |
| Msa0583710 | AT2G29605.1 | 37.079 | 89 | 55 | 1 | 44 | 132 | 12 | 99 | 1.80e-12 | 68.2 |
| Msa0583710 | AT3G55240.1 | 40.000 | 85 | 39 | 1 | 34 | 118 | 1 | 73 | 3.94e-12 | 62.4 |
Find 121 sgRNAs with CRISPR-Local
Find 442 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCCCATTCGGATGAATTC+TGG | 0.145118 | 4_2:-2411397 | Msa0583710:CDS |
| CTTTGAGGGGTTGCAGATTC+AGG | 0.199940 | 4_2:-2416099 | Msa0583710:five_prime_UTR |
| GGCACCTTTCTATTAAATTC+TGG | 0.297711 | 4_2:+2413111 | None:intergenic |
| AGATGAAATTTATTCATATA+CGG | 0.304370 | 4_2:-2415186 | Msa0583710:five_prime_UTR |
| GATGCTCCTGTTGCAGATTC+AGG | 0.316487 | 4_2:-2413333 | Msa0583710:CDS |
| TTCAAGCAATGATAGCAAAA+AGG | 0.331651 | 4_2:-2413298 | Msa0583710:CDS |
| CTTTATTCATATATAATTGC+AGG | 0.333218 | 4_2:+2413090 | None:intergenic |
| AATAAATTACCTCCCAAGTT+TGG | 0.334177 | 4_2:+2410482 | None:intergenic |
| CTTGAAAAGGATTGAAACTT+TGG | 0.335255 | 4_2:+2416219 | None:intergenic |
| CTTGCACCGGATGGCGGGAA+TGG | 0.339819 | 4_2:-2410569 | Msa0583710:CDS |
| TCAAGTTGTCATGTGGTTAA+TGG | 0.343627 | 4_2:-2411442 | Msa0583710:CDS |
| ATTGTTTGGATGTTCACTCT+TGG | 0.355224 | 4_2:+2413365 | None:intergenic |
| AACTGAAATGAAGAACTTGC+AGG | 0.359277 | 4_2:-2415070 | Msa0583710:intron |
| AACCGCAGATTTACCAAACT+TGG | 0.370682 | 4_2:-2410495 | Msa0583710:CDS |
| CAGAGAGAAACAAGTGTTGC+TGG | 0.371730 | 4_2:+2416402 | None:intergenic |
| GCATCAGTTGTGTGATTGTT+TGG | 0.373031 | 4_2:+2413351 | None:intergenic |
| GGGGTTGCAGATTCAGGAAC+TGG | 0.381072 | 4_2:-2416093 | Msa0583710:five_prime_UTR |
| TTGTTTGGATGTTCACTCTT+GGG | 0.381138 | 4_2:+2413366 | None:intergenic |
| AAATAGAGAAAAGTAAGAAA+TGG | 0.383301 | 4_2:+2416245 | None:intergenic |
| GGACCACAGTGCTCCTGATA+TGG | 0.385772 | 4_2:-2410774 | Msa0583710:CDS |
| GAAAATTATGCATCTTGAAA+AGG | 0.393092 | 4_2:+2416206 | None:intergenic |
| GGGTGGAAATTGCTCGGTGC+AGG | 0.397270 | 4_2:+2411415 | None:intergenic |
| ATTGGAGCCAATGGAACCTT+TGG | 0.405471 | 4_2:+2412305 | None:intergenic |
| CGCAGTCAACAATCTACCTA+TGG | 0.410033 | 4_2:-2411533 | Msa0583710:intron |
| ACCCCATTCGGATGAATTCT+GGG | 0.411528 | 4_2:-2411396 | Msa0583710:CDS |
| TTGCACCGGATGGCGGGAAT+GGG | 0.417671 | 4_2:-2410568 | Msa0583710:CDS |
| GCTTGAATCTCCAGATCAAC+AGG | 0.418289 | 4_2:-2409772 | Msa0583710:CDS |
| TTCACTGCATCAGAAATATC+AGG | 0.419762 | 4_2:-2410662 | Msa0583710:CDS |
| TGGTTAAAACTCTACTGAAT+CGG | 0.422829 | 4_2:-2413061 | Msa0583710:CDS |
| TCTCCAGATCAACAGGATAT+AGG | 0.424911 | 4_2:-2409765 | Msa0583710:intron |
| AATAGAGAAAAGTAAGAAAT+GGG | 0.427492 | 4_2:+2416246 | None:intergenic |
| TGCAGCTTGCACCGGATGGC+GGG | 0.428704 | 4_2:-2410574 | Msa0583710:CDS |
| TTCCCAGAATTCATCCGAAT+GGG | 0.429662 | 4_2:+2411394 | None:intergenic |
| ACCACTGATGTTGGACTCAC+TGG | 0.432569 | 4_2:+2410704 | None:intergenic |
| TTACCTATATCCTGTTGATC+TGG | 0.436551 | 4_2:+2409762 | None:intergenic |
| CCTACCAAGAGCTGTAAATC+CGG | 0.442690 | 4_2:+2413025 | None:intergenic |
| AGCCGCAGGTCAGCCTCATA+TGG | 0.443308 | 4_2:-2411479 | Msa0583710:CDS |
| TTTACCTTAAACTTCTTCGT+GGG | 0.444112 | 4_2:-2416176 | Msa0583710:five_prime_UTR |
| CGAGCAATTTCCACCCCATT+CGG | 0.456487 | 4_2:-2411408 | Msa0583710:CDS |
| TCTTCATTTCAGTTGAAAGA+AGG | 0.458910 | 4_2:+2415079 | None:intergenic |
| TTTGCAGATCTTGGAGCTCT+AGG | 0.459587 | 4_2:-2409840 | Msa0583710:intron |
| GATCCCGGATTTACAGCTCT+TGG | 0.467139 | 4_2:-2413029 | Msa0583710:intron |
| AGATCTTCAAATGAAAGAAA+TGG | 0.467424 | 4_2:+2416475 | None:intergenic |
| TAATTCTGATGTGGTAAGTT+CGG | 0.471070 | 4_2:-2410603 | Msa0583710:CDS |
| GCTGAGCCTGAATCTGCAAC+AGG | 0.471495 | 4_2:+2413327 | None:intergenic |
| GAAGAAGTTTAAGGTAAAGT+AGG | 0.474232 | 4_2:+2416181 | None:intergenic |
| GGAGCCAATGGAACCTTTGG+AGG | 0.481798 | 4_2:+2412308 | None:intergenic |
| GAGAGGTGAAGACAGTGCTT+AGG | 0.483895 | 4_2:-2408919 | None:intergenic |
| GGTTAAAACTCTACTGAATC+GGG | 0.484157 | 4_2:-2413060 | Msa0583710:CDS |
| GGGTGGATTCCATTCTGTAT+TGG | 0.484433 | 4_2:+2412287 | None:intergenic |
| CCATTCTGTATTGGAGCCAA+TGG | 0.484477 | 4_2:+2412296 | None:intergenic |
| GAAATCCCATTCCCGCCATC+CGG | 0.484584 | 4_2:+2410563 | None:intergenic |
| GGAATCATAGGAGCCATATC+AGG | 0.485066 | 4_2:+2410761 | None:intergenic |
| GAAAAGGATTGAAACTTTGG+CGG | 0.487720 | 4_2:+2416222 | None:intergenic |
| ATATGAGGCTGACCTGCGGC+TGG | 0.488258 | 4_2:+2411481 | None:intergenic |
| TGGAGCTCTAGGAAACTATC+CGG | 0.489098 | 4_2:-2409829 | Msa0583710:CDS |
| ATAGGATGCTGCTGTAGTAC+TGG | 0.491737 | 4_2:+2411505 | None:intergenic |
| CAATGGAACCTTTGGAGGCA+TGG | 0.494839 | 4_2:+2412313 | None:intergenic |
| CTTTACCTTAAACTTCTTCG+TGG | 0.498114 | 4_2:-2416177 | Msa0583710:five_prime_UTR |
| CATGCCTCCAAAGGTTCCAT+TGG | 0.502362 | 4_2:-2412312 | Msa0583710:CDS |
| AGGTCCAGAATTTAATAGAA+AGG | 0.502568 | 4_2:-2413115 | Msa0583710:CDS |
| TGCATCAGAAATATCAGGAA+TGG | 0.502982 | 4_2:-2410657 | Msa0583710:CDS |
| GAATGGGATTTCTAGATCGC+TGG | 0.503985 | 4_2:-2410552 | Msa0583710:CDS |
| CAGCATCCTATGCCAGCCGC+AGG | 0.510852 | 4_2:-2411493 | Msa0583710:CDS |
| AATCTGCGGTTAAATCTGAT+AGG | 0.511665 | 4_2:+2410507 | None:intergenic |
| AAATGAAAGAAATGGTATAG+AGG | 0.511731 | 4_2:+2416483 | None:intergenic |
| GATATTTCTGATGCAGTGAA+AGG | 0.513754 | 4_2:+2410665 | None:intergenic |
| TCAGCCTCATATGGACTCCA+TGG | 0.515218 | 4_2:-2411470 | Msa0583710:CDS |
| TGGTTATTGAAGCATGGTGA+TGG | 0.519374 | 4_2:-2410795 | Msa0583710:intron |
| AATGGAATCCACCCTATGCC+TGG | 0.520904 | 4_2:-2412278 | Msa0583710:intron |
| TTGCAGCTTGCACCGGATGG+CGG | 0.530645 | 4_2:-2410575 | Msa0583710:CDS |
| AATGGAACCTTTGGAGGCAT+GGG | 0.531912 | 4_2:+2412314 | None:intergenic |
| ACCGCAGATTTACCAAACTT+GGG | 0.542890 | 4_2:-2410494 | Msa0583710:CDS |
| GGTAGGATTGCAGCTTGCAC+CGG | 0.543199 | 4_2:-2410582 | Msa0583710:CDS |
| GCATCAGAAATATCAGGAAT+GGG | 0.543436 | 4_2:-2410656 | Msa0583710:CDS |
| TCTGATGTGGTAAGTTCGGT+AGG | 0.551727 | 4_2:-2410599 | Msa0583710:CDS |
| GGTGGAAATTGCTCGGTGCA+GGG | 0.553715 | 4_2:+2411416 | None:intergenic |
| GGCTGACCTGCGGCTGGCAT+AGG | 0.554669 | 4_2:+2411487 | None:intergenic |
| ATTCCCAGAATTCATCCGAA+TGG | 0.557362 | 4_2:+2411393 | None:intergenic |
| ATATTTCTGATGCAGTGAAA+GGG | 0.559561 | 4_2:+2410666 | None:intergenic |
| CTACCAAGAGCTGTAAATCC+GGG | 0.559564 | 4_2:+2413026 | None:intergenic |
| CCACTCGATACCACTGATGT+TGG | 0.561378 | 4_2:+2410695 | None:intergenic |
| ATATATGAATAAAGATGAAG+TGG | 0.563348 | 4_2:-2413081 | Msa0583710:CDS |
| GGATTGCAGCTTGCACCGGA+TGG | 0.563524 | 4_2:-2410578 | Msa0583710:CDS |
| ATTCATATACGGTGGTGTGT+TGG | 0.565411 | 4_2:-2415175 | Msa0583710:five_prime_UTR |
| GTAAGAATTTACCAGGCATA+GGG | 0.565431 | 4_2:+2412267 | None:intergenic |
| AGAGAGAAACAAGTGTTGCT+GGG | 0.566398 | 4_2:+2416403 | None:intergenic |
| TTCAGCATTTAATTCTGATG+TGG | 0.577584 | 4_2:-2410612 | Msa0583710:CDS |
| GGTAAGAATTTACCAGGCAT+AGG | 0.578613 | 4_2:+2412266 | None:intergenic |
| CGAATGGGGTGGAAATTGCT+CGG | 0.583725 | 4_2:+2411409 | None:intergenic |
| AATCGGGCAAAGATAGATCC+CGG | 0.583846 | 4_2:-2413044 | Msa0583710:CDS |
| CCATTGGCTCCAATACAGAA+TGG | 0.587395 | 4_2:-2412296 | Msa0583710:CDS |
| ATGCCCATGGAGTCCATATG+AGG | 0.589725 | 4_2:+2411466 | None:intergenic |
| AGAATTTACCAGGCATAGGG+TGG | 0.592466 | 4_2:+2412270 | None:intergenic |
| TAATGAGAATAGTAGTAATG+AGG | 0.593184 | 4_2:+2416294 | None:intergenic |
| GCGAACAATCTTGAGTTCAG+TGG | 0.593438 | 4_2:-2415144 | Msa0583710:five_prime_UTR |
| TTACCTTAAACTTCTTCGTG+GGG | 0.596179 | 4_2:-2416175 | Msa0583710:five_prime_UTR |
| GCTCCTATGATTCCACAAAA+CGG | 0.596239 | 4_2:-2410752 | Msa0583710:CDS |
| GCAGTCAACAATCTACCTAT+GGG | 0.598154 | 4_2:-2411532 | Msa0583710:intron |
| TACCTTAAACTTCTTCGTGG+GGG | 0.598485 | 4_2:-2416174 | Msa0583710:five_prime_UTR |
| ACTCACTGGCATTTCTGAGA+CGG | 0.603360 | 4_2:+2410718 | None:intergenic |
| AGCAACATGTCTGAATCAGA+TGG | 0.604874 | 4_2:+2409792 | None:intergenic |
| CAGCCTCATATGGACTCCAT+GGG | 0.606700 | 4_2:-2411469 | Msa0583710:CDS |
| GAAGTGTCCCATGCCTCCAA+AGG | 0.607338 | 4_2:-2412321 | Msa0583710:CDS |
| GATCGCTGGATCAAATTCAG+TGG | 0.616974 | 4_2:-2410538 | Msa0583710:CDS |
| TGTAGTACTGGATATCCCAT+AGG | 0.618753 | 4_2:+2411517 | None:intergenic |
| CAGAATTCATCCGAATGGGG+TGG | 0.618756 | 4_2:+2411398 | None:intergenic |
| GCCAGTGAGTCCAACATCAG+TGG | 0.623937 | 4_2:-2410705 | Msa0583710:CDS |
| GGAGCTCTAGGAAACTATCC+GGG | 0.632052 | 4_2:-2409828 | Msa0583710:CDS |
| TCCCAAGTTTGGTAAATCTG+CGG | 0.636909 | 4_2:+2410493 | None:intergenic |
| ATTCAGGAACTGGGTATGTG+AGG | 0.637385 | 4_2:-2416083 | Msa0583710:intron |
| ATGACAACTTGACATGCCCA+TGG | 0.641314 | 4_2:+2411453 | None:intergenic |
| GGGTTGCAGATTCAGGAACT+GGG | 0.651935 | 4_2:-2416092 | Msa0583710:five_prime_UTR |
| TGAAATTTATTCATATACGG+TGG | 0.658844 | 4_2:-2415183 | Msa0583710:five_prime_UTR |
| TCCCAGAATTCATCCGAATG+GGG | 0.663350 | 4_2:+2411395 | None:intergenic |
| AGTGTGGCAGAAGTTAGAAG+AGG | 0.664115 | 4_2:-2412441 | Msa0583710:CDS |
| CCAACATCAGTGGTATCGAG+TGG | 0.692805 | 4_2:-2410695 | Msa0583710:CDS |
| GCAGATTTACCAAACTTGGG+AGG | 0.702451 | 4_2:-2410491 | Msa0583710:intron |
| GTCCATATGAGGCTGACCTG+CGG | 0.704335 | 4_2:+2411477 | None:intergenic |
| GGGCATGTCAAGTTGTCATG+TGG | 0.709494 | 4_2:-2411449 | Msa0583710:CDS |
| GAGCCATATCAGGAGCACTG+TGG | 0.763542 | 4_2:+2410771 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAAAAAAATTAAAAAAA+AGG | + | chr4_2:2414605-2414624 | None:intergenic | 0.0% |
| !!! | ATATATGGAAAATAATATTT+TGG | - | chr4_2:2410067-2410086 | Msa0583710:intron | 10.0% |
| !! | TTAAAAATTGTTAAAGAAAA+TGG | + | chr4_2:2410878-2410897 | None:intergenic | 10.0% |
| !!! | TTTTTTACTTAAGATTCAAA+AGG | - | chr4_2:2409633-2409652 | Msa0583710:intron | 15.0% |
| !!! | TTTTTACTTAAGATTCAAAA+GGG | - | chr4_2:2409634-2409653 | Msa0583710:intron | 15.0% |
| !!! | TTTTTTTACCCTTTTTTATA+TGG | - | chr4_2:2409751-2409770 | Msa0583710:intron | 15.0% |
| !!! | TTTTCTAACCATATAAAAAA+GGG | + | chr4_2:2409762-2409781 | None:intergenic | 15.0% |
| !!! | TTTTTCTAACCATATAAAAA+AGG | + | chr4_2:2409763-2409782 | None:intergenic | 15.0% |
| !! | ATTAATGTCTACTATTATTA+TGG | - | chr4_2:2409794-2409813 | Msa0583710:CDS | 15.0% |
| !!! | AATGTTCAATTTGTTATATA+TGG | - | chr4_2:2410052-2410071 | Msa0583710:intron | 15.0% |
| !! | AAATTTAACAATTATTGAAG+CGG | - | chr4_2:2410195-2410214 | Msa0583710:intron | 15.0% |
| !! | AGATGAAATTTATTCATATA+CGG | - | chr4_2:2410254-2410273 | Msa0583710:intron | 15.0% |
| !!! | TAACTAAATATACCTTTTTA+TGG | - | chr4_2:2412001-2412020 | Msa0583710:intron | 15.0% |
| !! | ATTCCAATACAAAATATAAA+TGG | + | chr4_2:2412462-2412481 | None:intergenic | 15.0% |
| !!! | TGAAAAACTTTTATACATTT+AGG | - | chr4_2:2412515-2412534 | Msa0583710:intron | 15.0% |
| !! | TCAAAAGTAATAAGATTTAT+TGG | + | chr4_2:2414366-2414385 | None:intergenic | 15.0% |
| !!! | TCAAAAGATACAAAATATTT+TGG | - | chr4_2:2415412-2415431 | Msa0583710:intron | 15.0% |
| !! | CATCAAAGTTATTAAAATTT+AGG | + | chr4_2:2415737-2415756 | None:intergenic | 15.0% |
| !! | AATATATTTCATTATTACTG+TGG | - | chr4_2:2416428-2416447 | Msa0583710:five_prime_UTR | 15.0% |
| !!! | TTTGAGATATATCTATTATT+AGG | - | chr4_2:2416498-2416517 | Msa0583710:five_prime_UTR | 15.0% |
| !! | TTGAGATATATCTATTATTA+GGG | - | chr4_2:2416499-2416518 | Msa0583710:five_prime_UTR | 15.0% |
| !! | AATAGAGAAAAGTAAGAAAT+GGG | + | chr4_2:2409197-2409216 | None:intergenic | 20.0% |
| !! | AAATAGAGAAAAGTAAGAAA+TGG | + | chr4_2:2409198-2409217 | None:intergenic | 20.0% |
| !!! | TTTTTTTGCTTTTTTCTTTG+AGG | - | chr4_2:2409326-2409345 | Msa0583710:intron | 20.0% |
| !!! | TTTTTTGCTTTTTTCTTTGA+GGG | - | chr4_2:2409327-2409346 | Msa0583710:intron | 20.0% |
| !!! | TTTTGTTTATTTGGTTTCAA+TGG | - | chr4_2:2409660-2409679 | Msa0583710:intron | 20.0% |
| !!! | TTTTTTCTTTTTGTTGTTTG+AGG | - | chr4_2:2409699-2409718 | Msa0583710:intron | 20.0% |
| !!! | TTTTTCTTTTTGTTGTTTGA+GGG | - | chr4_2:2409700-2409719 | Msa0583710:intron | 20.0% |
| !! | AAAGTTCATGTTAAAAATTG+TGG | - | chr4_2:2409862-2409881 | Msa0583710:intron | 20.0% |
| !! | TGAATGAAAAAAATAGCTAT+TGG | - | chr4_2:2409926-2409945 | Msa0583710:intron | 20.0% |
| !! | TTCTCATATTTACTTTCATA+TGG | - | chr4_2:2409991-2410010 | Msa0583710:intron | 20.0% |
| !! | CATTTGAAAGCTTATTATAA+AGG | + | chr4_2:2410036-2410055 | None:intergenic | 20.0% |
| !!! | ATAATATTTTGGTGTACTAT+TGG | - | chr4_2:2410078-2410097 | Msa0583710:intron | 20.0% |
| !!! | TTCATTTTCTTTATCATATG+AGG | - | chr4_2:2410141-2410160 | Msa0583710:intron | 20.0% |
| !!! | CATTTCTATTTTTAGTATTG+AGG | + | chr4_2:2410411-2410430 | None:intergenic | 20.0% |
| !! | TATTGTTCCTTTAAATATCT+AGG | - | chr4_2:2410436-2410455 | Msa0583710:intron | 20.0% |
| !!! | AAATAAACATAAAAGCGTAT+AGG | - | chr4_2:2410838-2410857 | Msa0583710:intron | 20.0% |
| !!! | ATTTTCAGATATCTTGAAAA+TGG | - | chr4_2:2410911-2410930 | Msa0583710:intron | 20.0% |
| !! | GCATTAAATATTTACCAATT+AGG | + | chr4_2:2411369-2411388 | None:intergenic | 20.0% |
| !! | CTTTATTCATATATAATTGC+AGG | + | chr4_2:2412353-2412372 | None:intergenic | 20.0% |
| !! | ATATATGAATAAAGATGAAG+TGG | - | chr4_2:2412359-2412378 | Msa0583710:CDS | 20.0% |
| !!! | ATGCCATTTATATTTTGTAT+TGG | - | chr4_2:2412456-2412475 | Msa0583710:intron | 20.0% |
| !! | TTAAACTGTTTATCAAAACA+GGG | + | chr4_2:2412541-2412560 | None:intergenic | 20.0% |
| !! | ATTAAACTGTTTATCAAAAC+AGG | + | chr4_2:2412542-2412561 | None:intergenic | 20.0% |
| !!! | ATTTTCATGTTACCAATTTA+TGG | + | chr4_2:2412849-2412868 | None:intergenic | 20.0% |
| !!! | AAGTTTGTATACATTTTTGA+AGG | + | chr4_2:2412941-2412960 | None:intergenic | 20.0% |
| !!! | ATGTTTTTATTAATTCAGTG+TGG | - | chr4_2:2412983-2413002 | Msa0583710:intron | 20.0% |
| !! | AGTTCACTTTAATATAATCA+AGG | + | chr4_2:2413525-2413544 | None:intergenic | 20.0% |
| !!! | CATGATAGTTTTTAGAATTT+AGG | + | chr4_2:2413557-2413576 | None:intergenic | 20.0% |
| !!! | TATAGATTTTTCCAAATCTT+TGG | - | chr4_2:2413610-2413629 | Msa0583710:intron | 20.0% |
| !! | TAATAAGAACAATCTTGTAA+TGG | + | chr4_2:2413680-2413699 | None:intergenic | 20.0% |
| !! | AAAAAAAAAAAGACTGCATA+AGG | + | chr4_2:2413754-2413773 | None:intergenic | 20.0% |
| !! | AGATACATAAAATGATATCA+TGG | + | chr4_2:2414103-2414122 | None:intergenic | 20.0% |
| !! | AATGCATACAAATTAAATTC+TGG | - | chr4_2:2414180-2414199 | Msa0583710:intron | 20.0% |
| !! | TGACAATTAAAAATGAATAG+AGG | - | chr4_2:2414549-2414568 | Msa0583710:intron | 20.0% |
| !! | GACAATTAAAAATGAATAGA+GGG | - | chr4_2:2414550-2414569 | Msa0583710:intron | 20.0% |
| !! | TAATAAGCACTTAATTAATC+TGG | + | chr4_2:2415027-2415046 | None:intergenic | 20.0% |
| !! | TCTCAAATATAAGGAAAAAT+TGG | - | chr4_2:2415061-2415080 | Msa0583710:intron | 20.0% |
| !! | TCAAATAAGTTAATTGAAAC+AGG | - | chr4_2:2416052-2416071 | Msa0583710:intron | 20.0% |
| ! | GTTGAAAAATCTAGCAAAAT+GGG | + | chr4_2:2408930-2408949 | None:intergenic | 25.0% |
| ! | AAATGAAAGAAATGGTATAG+AGG | + | chr4_2:2408960-2408979 | None:intergenic | 25.0% |
| ! | AGATCTTCAAATGAAAGAAA+TGG | + | chr4_2:2408968-2408987 | None:intergenic | 25.0% |
| !!! | GGAGAGATATTTTTTGAAAA+GGG | + | chr4_2:2409089-2409108 | None:intergenic | 25.0% |
| ! | TAATGAGAATAGTAGTAATG+AGG | + | chr4_2:2409149-2409168 | None:intergenic | 25.0% |
| ! | GAAAATTATGCATCTTGAAA+AGG | + | chr4_2:2409237-2409256 | None:intergenic | 25.0% |
| !!! | TTTTTGCTTTTTTCTTTGAG+GGG | - | chr4_2:2409328-2409347 | Msa0583710:intron | 25.0% |
| !! | AGATCTTAAAGTTCCATTTT+TGG | - | chr4_2:2409405-2409424 | Msa0583710:intron | 25.0% |
| !! | ATTTTTGTGTTTGATGCATT+TGG | - | chr4_2:2409442-2409461 | Msa0583710:intron | 25.0% |
| !! | TTTTTGTGTTTGATGCATTT+GGG | - | chr4_2:2409443-2409462 | Msa0583710:intron | 25.0% |
| !! | TAAAAAGTTTGTTCCTTTGA+AGG | - | chr4_2:2409489-2409508 | Msa0583710:intron | 25.0% |
| ! | CAAACAAAAATTTCCTTCAA+AGG | + | chr4_2:2409505-2409524 | None:intergenic | 25.0% |
| !!! | CTTTGAAGGAAATTTTTGTT+TGG | - | chr4_2:2409503-2409522 | Msa0583710:intron | 25.0% |
| !!! | AAAGGGTTGTTTTGTTTATT+TGG | - | chr4_2:2409651-2409670 | Msa0583710:intron | 25.0% |
| !!! | TTTTCTTTTTGTTGTTTGAG+GGG | - | chr4_2:2409701-2409720 | Msa0583710:intron | 25.0% |
| ! | AAAAAATAGCTATTGGAATG+TGG | - | chr4_2:2409933-2409952 | Msa0583710:intron | 25.0% |
| ! | TGAAATTTATTCATATACGG+TGG | - | chr4_2:2410257-2410276 | Msa0583710:intron | 25.0% |
| ! | TTGAATTAAGCAATTTCCTT+AGG | + | chr4_2:2410521-2410540 | None:intergenic | 25.0% |
| ! | ATCACATATGAAAACATCAT+TGG | - | chr4_2:2410593-2410612 | Msa0583710:CDS | 25.0% |
| ! | GTTTGTCCTACAATTAAATA+CGG | - | chr4_2:2410719-2410738 | Msa0583710:CDS | 25.0% |
| ! | AGAAAATGGCAAGAAATATT+GGG | + | chr4_2:2410864-2410883 | None:intergenic | 25.0% |
| ! | AAGAAAATGGCAAGAAATAT+TGG | + | chr4_2:2410865-2410884 | None:intergenic | 25.0% |
| ! | CATGTATGAAGTTGTTAATT+TGG | - | chr4_2:2411149-2411168 | Msa0583710:intron | 25.0% |
| !! | AAGTTGTTAATTTGGTTGAT+TGG | - | chr4_2:2411157-2411176 | Msa0583710:intron | 25.0% |
| !! | AGTTGTTAATTTGGTTGATT+GGG | - | chr4_2:2411158-2411177 | Msa0583710:intron | 25.0% |
| !!! | CTAATGAAGTATTGTAACTA+CGG | + | chr4_2:2411189-2411208 | None:intergenic | 25.0% |
| ! | CATATCACATAAAACATTGT+CGG | + | chr4_2:2411416-2411435 | None:intergenic | 25.0% |
| !! | AGTTGAAGGGAAAATTTTAT+TGG | - | chr4_2:2411449-2411468 | Msa0583710:CDS | 25.0% |
| ! | AGTTCTACAATTCCATAAAA+AGG | + | chr4_2:2412016-2412035 | None:intergenic | 25.0% |
| ! | TTATTTAATCCACAAGACAA+AGG | + | chr4_2:2412261-2412280 | None:intergenic | 25.0% |
| !! | TCTATTCCAAAAACTTTTGT+AGG | - | chr4_2:2412305-2412324 | Msa0583710:CDS | 25.0% |
| !! | TGATGTTCAAGTTTATCTAA+TGG | + | chr4_2:2412774-2412793 | None:intergenic | 25.0% |
| ! | AATTATATTACGAGAATGCA+TGG | + | chr4_2:2412917-2412936 | None:intergenic | 25.0% |
| !!! | CAATTTTAGTCTAACATAGT+AGG | + | chr4_2:2413046-2413065 | None:intergenic | 25.0% |
| ! | CATAACATAACATAACCATT+AGG | + | chr4_2:2413394-2413413 | None:intergenic | 25.0% |
| ! | ACAATGACATCAATTATTAG+AGG | + | chr4_2:2413446-2413465 | None:intergenic | 25.0% |
| ! | ATTGCAATATCATGTGTTAT+TGG | + | chr4_2:2413492-2413511 | None:intergenic | 25.0% |
| !! | ATTATATTTGGAGTGAAGTT+AGG | + | chr4_2:2413589-2413608 | None:intergenic | 25.0% |
| ! | GATTGTTCTTATTATGATAG+TGG | - | chr4_2:2413686-2413705 | Msa0583710:intron | 25.0% |
| ! | AGAAAAGATAAAGCATAGAA+GGG | + | chr4_2:2413842-2413861 | None:intergenic | 25.0% |
| ! | AAGAAAAGATAAAGCATAGA+AGG | + | chr4_2:2413843-2413862 | None:intergenic | 25.0% |
| !! | CAAATGGTGTTAAAGAATAA+TGG | + | chr4_2:2413880-2413899 | None:intergenic | 25.0% |
| ! | ATATCATGGTATGATTTGAT+TGG | + | chr4_2:2414089-2414108 | None:intergenic | 25.0% |
| ! | CATTGTCATATAGATATTTG+TGG | + | chr4_2:2414126-2414145 | None:intergenic | 25.0% |
| ! | TATCTATATGACAATGTGAA+TGG | - | chr4_2:2414130-2414149 | Msa0583710:intron | 25.0% |
| !!! | TCCTTTTTAGTTGTCATTTT+AGG | - | chr4_2:2414317-2414336 | Msa0583710:intron | 25.0% |
| ! | TCCTAAAATGACAACTAAAA+AGG | + | chr4_2:2414321-2414340 | None:intergenic | 25.0% |
| !! | ATAAGATTTATTGGTTGTCT+TGG | + | chr4_2:2414357-2414376 | None:intergenic | 25.0% |
| !!! | ATTTCTCTCTGGAATAAATA+AGG | - | chr4_2:2414444-2414463 | Msa0583710:intron | 25.0% |
| !!! | TTTCTCTCTGGAATAAATAA+GGG | - | chr4_2:2414445-2414464 | Msa0583710:intron | 25.0% |
| ! | TTTGAAGACGATAAGTAAAT+AGG | - | chr4_2:2414504-2414523 | Msa0583710:intron | 25.0% |
| !!! | TCAAAGAAAGTTGATGTATA+TGG | - | chr4_2:2415084-2415103 | Msa0583710:exon | 25.0% |
| !!! | GATGTATTTGGTTCAAATTT+TGG | + | chr4_2:2415111-2415130 | None:intergenic | 25.0% |
| ! | CAAAGAAAGTTTGATGTATT+TGG | + | chr4_2:2415123-2415142 | None:intergenic | 25.0% |
| ! | TAAGTAGACTTGAAATTGAT+AGG | + | chr4_2:2415482-2415501 | None:intergenic | 25.0% |
| !!! | ACTACTATTTTGAAGTCTTA+GGG | + | chr4_2:2415540-2415559 | None:intergenic | 25.0% |
| !! | TATTTTCGCAATGAAATATG+TGG | - | chr4_2:2415572-2415591 | Msa0583710:intron | 25.0% |
| ! | ATAACTTTGATGAATCATAG+CGG | - | chr4_2:2415745-2415764 | Msa0583710:intron | 25.0% |
| !! | ACTTATTTGAGTTTATCTAC+CGG | + | chr4_2:2416042-2416061 | None:intergenic | 25.0% |
| ! | GAAGAACATATTAACTCTAT+AGG | + | chr4_2:2416115-2416134 | None:intergenic | 25.0% |
| ! | ATATATCTATTATTAGGGAG+AGG | - | chr4_2:2416504-2416523 | Msa0583710:five_prime_UTR | 25.0% |
| CGTTGAAAAATCTAGCAAAA+TGG | + | chr4_2:2408931-2408950 | None:intergenic | 30.0% | |
| !!! | GAGATATTTTTTGAAAAGGG+TGG | + | chr4_2:2409086-2409105 | None:intergenic | 30.0% |
| !!! | GGGAGAGATATTTTTTGAAA+AGG | + | chr4_2:2409090-2409109 | None:intergenic | 30.0% |
| CTTGAAAAGGATTGAAACTT+TGG | + | chr4_2:2409224-2409243 | None:intergenic | 30.0% | |
| ! | GAAGAAGTTTAAGGTAAAGT+AGG | + | chr4_2:2409262-2409281 | None:intergenic | 30.0% |
| TTTACCTTAAACTTCTTCGT+GGG | - | chr4_2:2409264-2409283 | Msa0583710:intron | 30.0% | |
| AACAACTCATGAACCAAAAA+TGG | + | chr4_2:2409421-2409440 | None:intergenic | 30.0% | |
| CTTCATTCACAATTTAGATC+TGG | - | chr4_2:2409550-2409569 | Msa0583710:intron | 30.0% | |
| GTTCATGTTAAAAATTGTGG+TGG | - | chr4_2:2409865-2409884 | Msa0583710:intron | 30.0% | |
| ! | TGTTAAAAATTGTGGTGGAA+TGG | - | chr4_2:2409870-2409889 | Msa0583710:intron | 30.0% |
| TTGGTTTACAATTCTCTCAT+TGG | - | chr4_2:2410219-2410238 | Msa0583710:intron | 30.0% | |
| TCTTCATTTCAGTTGAAAGA+AGG | + | chr4_2:2410364-2410383 | None:intergenic | 30.0% | |
| ! | TTAGTATTGAGGTGTATGAT+GGG | + | chr4_2:2410400-2410419 | None:intergenic | 30.0% |
| ! | TTTAGTATTGAGGTGTATGA+TGG | + | chr4_2:2410401-2410420 | None:intergenic | 30.0% |
| GGTTCAACCTAGATATTTAA+AGG | + | chr4_2:2410446-2410465 | None:intergenic | 30.0% | |
| ATTAAAGCATATGCTTTCTC+TGG | - | chr4_2:2410552-2410571 | Msa0583710:CDS | 30.0% | |
| TGTGTACCGTATTTAATTGT+AGG | + | chr4_2:2410728-2410747 | None:intergenic | 30.0% | |
| TAGATAAACACTATCCACAA+CGG | + | chr4_2:2410775-2410794 | None:intergenic | 30.0% | |
| ! | AACAATGTTATCGTTGTTTC+TGG | - | chr4_2:2410937-2410956 | Msa0583710:intron | 30.0% |
| ! | TTCATTTTGAATTGCTAGCA+AGG | + | chr4_2:2411034-2411053 | None:intergenic | 30.0% |
| ! | CATTAGCATAATGAGTTTTC+TGG | - | chr4_2:2411203-2411222 | Msa0583710:intron | 30.0% |
| !!! | TTGGTTTTTTAGTCTGTTGT+TGG | - | chr4_2:2411276-2411295 | Msa0583710:intron | 30.0% |
| ! | TAGACAAGTTGAAATAGCTA+GGG | + | chr4_2:2411320-2411339 | None:intergenic | 30.0% |
| ! | TTAGACAAGTTGAAATAGCT+AGG | + | chr4_2:2411321-2411340 | None:intergenic | 30.0% |
| ! | GCTTTATTAAGCTACCTAAT+TGG | - | chr4_2:2411352-2411371 | Msa0583710:intron | 30.0% |
| !! | AAAGTATCACTCAAGTTGAA+GGG | - | chr4_2:2411436-2411455 | Msa0583710:CDS | 30.0% |
| !! | CAGTTAATTTATTTTCGTGC+TGG | + | chr4_2:2411528-2411547 | None:intergenic | 30.0% |
| ATCTTATCTACATCTACTAC+AGG | + | chr4_2:2411642-2411661 | None:intergenic | 30.0% | |
| TGTAGTAGATGTAGATAAGA+TGG | - | chr4_2:2411641-2411660 | Msa0583710:intron | 30.0% | |
| AGATCTAGAGATTAATGAGT+TGG | - | chr4_2:2411806-2411825 | Msa0583710:intron | 30.0% | |
| ! | GTTGGCAATGTTTTCAATAT+CGG | - | chr4_2:2411881-2411900 | Msa0583710:intron | 30.0% |
| TTCAAGCAATGATAGCAAAA+AGG | - | chr4_2:2412142-2412161 | Msa0583710:intron | 30.0% | |
| ATGATAGCAAAAAGGTTTCA+CGG | - | chr4_2:2412150-2412169 | Msa0583710:intron | 30.0% | |
| CAAAGGAAGAAAATGAAAAG+TGG | + | chr4_2:2412244-2412263 | None:intergenic | 30.0% | |
| !!! | AGTTTTTGGAATAGATCGAA+GGG | + | chr4_2:2412300-2412319 | None:intergenic | 30.0% |
| !!! | AAGTTTTTGGAATAGATCGA+AGG | + | chr4_2:2412301-2412320 | None:intergenic | 30.0% |
| AGGTCCAGAATTTAATAGAA+AGG | - | chr4_2:2412325-2412344 | Msa0583710:CDS | 30.0% | |
| TGGTTAAAACTCTACTGAAT+CGG | - | chr4_2:2412379-2412398 | Msa0583710:CDS | 30.0% | |
| AAATATAAATGGCATGACTG+AGG | + | chr4_2:2412451-2412470 | None:intergenic | 30.0% | |
| TTCAGTGAATAACATTGCAA+TGG | + | chr4_2:2412499-2412518 | None:intergenic | 30.0% | |
| ACGAAGCTTAAAACAACTTA+TGG | - | chr4_2:2412693-2412712 | Msa0583710:intron | 30.0% | |
| AAATTGTTTAGAAGAGCCTA+TGG | + | chr4_2:2412737-2412756 | None:intergenic | 30.0% | |
| AAGACGGAAAATCATTTATG+AGG | + | chr4_2:2412805-2412824 | None:intergenic | 30.0% | |
| !! | CCTGTGTTATTTAGATAAGA+CGG | + | chr4_2:2412821-2412840 | None:intergenic | 30.0% |
| ACACAGGTTTATCCATAAAT+TGG | - | chr4_2:2412834-2412853 | Msa0583710:intron | 30.0% | |
| TTCATTAAATATGACGAGAG+GGG | + | chr4_2:2413198-2413217 | None:intergenic | 30.0% | |
| CTTCATTAAATATGACGAGA+GGG | + | chr4_2:2413199-2413218 | None:intergenic | 30.0% | |
| ACTTCATTAAATATGACGAG+AGG | + | chr4_2:2413200-2413219 | None:intergenic | 30.0% | |
| CATACTATACTAATCACCTA+TGG | - | chr4_2:2413318-2413337 | Msa0583710:CDS | 30.0% | |
| AACAAGGTTTCTAAACCTAA+TGG | - | chr4_2:2413376-2413395 | Msa0583710:CDS | 30.0% | |
| AACACATGATATTGCAATTG+TGG | - | chr4_2:2413494-2413513 | Msa0583710:intron | 30.0% | |
| TTCTTAACTGTCCAAAGATT+TGG | + | chr4_2:2413624-2413643 | None:intergenic | 30.0% | |
| !!! | ACCAAAGGTCTTTTTTGAAA+GGG | + | chr4_2:2413781-2413800 | None:intergenic | 30.0% |
| ! | ATGGTGTTAAAGAATAATGG+AGG | + | chr4_2:2413877-2413896 | None:intergenic | 30.0% |
| ! | ATTTTATGCCTTGATCATTG+TGG | - | chr4_2:2414263-2414282 | Msa0583710:intron | 30.0% |
| ! | TCATTTCATCTATTTCTCTC+TGG | - | chr4_2:2414433-2414452 | Msa0583710:intron | 30.0% |
| ! | TAAAAATGAATAGAGGGTGT+AGG | - | chr4_2:2414556-2414575 | Msa0583710:intron | 30.0% |
| ! | ATATTTCTGATGCAGTGAAA+GGG | + | chr4_2:2414777-2414796 | None:intergenic | 30.0% |
| TTCAGCATTTAATTCTGATG+TGG | - | chr4_2:2414828-2414847 | Msa0583710:intron | 30.0% | |
| TAATTCTGATGTGGTAAGTT+CGG | - | chr4_2:2414837-2414856 | Msa0583710:intron | 30.0% | |
| AATAAATTACCTCCCAAGTT+TGG | + | chr4_2:2414961-2414980 | None:intergenic | 30.0% | |
| TTAGATATATAGATCCTGCT+TGG | - | chr4_2:2414997-2415016 | Msa0583710:intron | 30.0% | |
| ! | AGTTACTTATATTTGAGACC+CGG | - | chr4_2:2415146-2415165 | Msa0583710:five_prime_UTR | 30.0% |
| GCAAGCATAGAAATTGTTAA+TGG | + | chr4_2:2415443-2415462 | None:intergenic | 30.0% | |
| !!! | GACTACTATTTTGAAGTCTT+AGG | + | chr4_2:2415541-2415560 | None:intergenic | 30.0% |
| TTGCGAAAATACATCATGAT+AGG | + | chr4_2:2415563-2415582 | None:intergenic | 30.0% | |
| GATTGTCAACTAAATCTTGT+AGG | + | chr4_2:2415772-2415791 | None:intergenic | 30.0% | |
| ATAAACGCTTAACTATGTTG+TGG | + | chr4_2:2415817-2415836 | None:intergenic | 30.0% | |
| AGGTAAGATGTAAGTATCTT+TGG | + | chr4_2:2416187-2416206 | None:intergenic | 30.0% | |
| GATACTTACATCTTACCTTA+TGG | - | chr4_2:2416189-2416208 | Msa0583710:five_prime_UTR | 30.0% | |
| CCACTGAAATTAAAACCATA+AGG | + | chr4_2:2416207-2416226 | None:intergenic | 30.0% | |
| !!! | CCTTATGGTTTTAATTTCAG+TGG | - | chr4_2:2416204-2416223 | Msa0583710:five_prime_UTR | 30.0% |
| CTTGTTGCACATTAATTCTT+AGG | - | chr4_2:2416306-2416325 | Msa0583710:five_prime_UTR | 30.0% | |
| TGCACATTAATTCTTAGGTT+AGG | - | chr4_2:2416311-2416330 | Msa0583710:five_prime_UTR | 30.0% | |
| GCACATTAATTCTTAGGTTA+GGG | - | chr4_2:2416312-2416331 | Msa0583710:five_prime_UTR | 30.0% | |
| TTAGGTTAGGGAGAAAATTT+AGG | - | chr4_2:2416324-2416343 | Msa0583710:five_prime_UTR | 30.0% | |
| GAAAAGGATTGAAACTTTGG+CGG | + | chr4_2:2409221-2409240 | None:intergenic | 35.0% | |
| CTTTACCTTAAACTTCTTCG+TGG | - | chr4_2:2409263-2409282 | Msa0583710:intron | 35.0% | |
| TTACCTTAAACTTCTTCGTG+GGG | - | chr4_2:2409265-2409284 | Msa0583710:intron | 35.0% | |
| ACGTGATTATGTAACTGCAT+AGG | - | chr4_2:2410114-2410133 | Msa0583710:intron | 35.0% | |
| TAACAATTATTGAAGCGGCT+TGG | - | chr4_2:2410200-2410219 | Msa0583710:intron | 35.0% | |
| AACTGAAATGAAGAACTTGC+AGG | - | chr4_2:2410370-2410389 | Msa0583710:intron | 35.0% | |
| AGCAAGCATACAATAAGTTG+AGG | + | chr4_2:2410467-2410486 | None:intergenic | 35.0% | |
| ! | ACTCTTCAGCTTTGACAAAT+GGG | + | chr4_2:2410640-2410659 | None:intergenic | 35.0% |
| ! | AACTCTTCAGCTTTGACAAA+TGG | + | chr4_2:2410641-2410660 | None:intergenic | 35.0% |
| AGATAAACACTATCCACAAC+GGG | + | chr4_2:2410774-2410793 | None:intergenic | 35.0% | |
| !! | ATGAGTTTTCTGGCAATACA+TGG | - | chr4_2:2411213-2411232 | Msa0583710:intron | 35.0% |
| TGGTCTCTATATTGGAGAAA+TGG | - | chr4_2:2411242-2411261 | Msa0583710:intron | 35.0% | |
| TTTGCAAAATTAGCGAGCTT+TGG | - | chr4_2:2411389-2411408 | Msa0583710:intron | 35.0% | |
| TTGCAAAATTAGCGAGCTTT+GGG | - | chr4_2:2411390-2411409 | Msa0583710:intron | 35.0% | |
| !! | GAAAGTATCACTCAAGTTGA+AGG | - | chr4_2:2411435-2411454 | Msa0583710:CDS | 35.0% |
| ATGACAACATTAGAGAGAGT+TGG | - | chr4_2:2411609-2411628 | Msa0583710:intron | 35.0% | |
| TGACAACATTAGAGAGAGTT+GGG | - | chr4_2:2411610-2411629 | Msa0583710:intron | 35.0% | |
| AGTAGATGTAGATAAGATGG+TGG | - | chr4_2:2411644-2411663 | Msa0583710:intron | 35.0% | |
| !! | TAGATAAGATGGTGGAAACT+AGG | - | chr4_2:2411652-2411671 | Msa0583710:intron | 35.0% |
| AACATGTAGAGAGAAGACTT+GGG | - | chr4_2:2411688-2411707 | Msa0583710:intron | 35.0% | |
| AATCAAATCACTAGAGGTAG+AGG | - | chr4_2:2411747-2411766 | Msa0583710:intron | 35.0% | |
| GCTTCTGTTATAGTTTCTCT+AGG | + | chr4_2:2411777-2411796 | None:intergenic | 35.0% | |
| !! | TTAATGAGTTGGTCGTTTGA+TGG | - | chr4_2:2411817-2411836 | Msa0583710:intron | 35.0% |
| ! | ATAAGACTTGGTTGTTGAGT+TGG | - | chr4_2:2411863-2411882 | Msa0583710:intron | 35.0% |
| TTGTTTGGATGTTCACTCTT+GGG | + | chr4_2:2412077-2412096 | None:intergenic | 35.0% | |
| ATTGTTTGGATGTTCACTCT+TGG | + | chr4_2:2412078-2412097 | None:intergenic | 35.0% | |
| ! | CATTTTCTTCCTTTGTCTTG+TGG | - | chr4_2:2412249-2412268 | Msa0583710:intron | 35.0% |
| ! | TCTGGACCTACAAAAGTTTT+TGG | + | chr4_2:2412314-2412333 | None:intergenic | 35.0% |
| GGCACCTTTCTATTAAATTC+TGG | + | chr4_2:2412332-2412351 | None:intergenic | 35.0% | |
| GGTTAAAACTCTACTGAATC+GGG | - | chr4_2:2412380-2412399 | Msa0583710:CDS | 35.0% | |
| AGCTCATGAAAACAGCTTAT+AGG | + | chr4_2:2412654-2412673 | None:intergenic | 35.0% | |
| ! | GAGCTATTCTGGAAAGTTTA+TGG | - | chr4_2:2412669-2412688 | Msa0583710:intron | 35.0% |
| ! | GTGTCTTAAGTTGTTTCCAT+AGG | - | chr4_2:2412718-2412737 | Msa0583710:intron | 35.0% |
| CCGTCTTATCTAAATAACAC+AGG | - | chr4_2:2412818-2412837 | Msa0583710:intron | 35.0% | |
| AAAACATCAATTCCAGAGCA+AGG | + | chr4_2:2412970-2412989 | None:intergenic | 35.0% | |
| GTAAGAATTTACCAGGCATA+GGG | + | chr4_2:2413176-2413195 | None:intergenic | 35.0% | |
| ! | AATCACCCTCCCTTTTAATA+GGG | - | chr4_2:2413341-2413360 | Msa0583710:CDS | 35.0% |
| ATGCTTCGACCCTATTAAAA+GGG | + | chr4_2:2413353-2413372 | None:intergenic | 35.0% | |
| ! | AACTACCATCAATGCACTTT+TGG | - | chr4_2:2413418-2413437 | Msa0583710:intron | 35.0% |
| ATTGGATAACGCTTTCAATC+AGG | + | chr4_2:2413474-2413493 | None:intergenic | 35.0% | |
| CTTTGGACAGTTAAGAAGTT+TGG | - | chr4_2:2413627-2413646 | Msa0583710:intron | 35.0% | |
| CATAAGGCTCAAATATTCTC+AGG | + | chr4_2:2413738-2413757 | None:intergenic | 35.0% | |
| TCCCTTTCAAAAAAGACCTT+TGG | - | chr4_2:2413777-2413796 | Msa0583710:intron | 35.0% | |
| !!! | CACCAAAGGTCTTTTTTGAA+AGG | + | chr4_2:2413782-2413801 | None:intergenic | 35.0% |
| AATCCATCGTTTAACACCAA+AGG | + | chr4_2:2413796-2413815 | None:intergenic | 35.0% | |
| !! | TTGGTGTTAAACGATGGATT+AGG | - | chr4_2:2413796-2413815 | Msa0583710:intron | 35.0% |
| ! | TCAAGTTGTCATGTGGTTAA+TGG | - | chr4_2:2413998-2414017 | Msa0583710:intron | 35.0% |
| AGTAAAACCTAAGTGCATGA+CGG | + | chr4_2:2414289-2414308 | None:intergenic | 35.0% | |
| GACAACTAAAAAGGAACTGA+GGG | + | chr4_2:2414312-2414331 | None:intergenic | 35.0% | |
| TGACAACTAAAAAGGAACTG+AGG | + | chr4_2:2414313-2414332 | None:intergenic | 35.0% | |
| ! | AATAGAGGGTGTAGGTTAAT+TGG | - | chr4_2:2414564-2414583 | Msa0583710:intron | 35.0% |
| GTAGGTTAATTGGTTGAATG+CGG | - | chr4_2:2414574-2414593 | Msa0583710:intron | 35.0% | |
| !! | AGTAATTTGCTCTGCATTTG+TGG | - | chr4_2:2414625-2414644 | Msa0583710:intron | 35.0% |
| CATTTGTGGTTATTGAAGCA+TGG | - | chr4_2:2414639-2414658 | Msa0583710:intron | 35.0% | |
| ! | GATATTTCTGATGCAGTGAA+AGG | + | chr4_2:2414778-2414797 | None:intergenic | 35.0% |
| TTCACTGCATCAGAAATATC+AGG | - | chr4_2:2414778-2414797 | Msa0583710:intron | 35.0% | |
| TGCATCAGAAATATCAGGAA+TGG | - | chr4_2:2414783-2414802 | Msa0583710:intron | 35.0% | |
| GCATCAGAAATATCAGGAAT+GGG | - | chr4_2:2414784-2414803 | Msa0583710:intron | 35.0% | |
| AATCTGCGGTTAAATCTGAT+AGG | + | chr4_2:2414936-2414955 | None:intergenic | 35.0% | |
| ATTAATCTGGTTAACCAAGC+AGG | + | chr4_2:2415014-2415033 | None:intergenic | 35.0% | |
| TGCTTATTATATACTCCCTC+TGG | - | chr4_2:2415038-2415057 | Msa0583710:intron | 35.0% | |
| ! | TCCTTATATTTGAGACCAGA+GGG | + | chr4_2:2415056-2415075 | None:intergenic | 35.0% |
| ! | TTCCTTATATTTGAGACCAG+AGG | + | chr4_2:2415057-2415076 | None:intergenic | 35.0% |
| GGGTCTCAAATATAAGTAAC+TGG | + | chr4_2:2415147-2415166 | None:intergenic | 35.0% | |
| TACATAAGCACTTACTACTC+CGG | + | chr4_2:2415168-2415187 | None:intergenic | 35.0% | |
| ! | TGCATCATTCTTCTTTTCAG+AGG | + | chr4_2:2415293-2415312 | None:intergenic | 35.0% |
| TGTGTGTGTTTCTTTATCTG+TGG | - | chr4_2:2415355-2415374 | Msa0583710:intron | 35.0% | |
| TCTGAATCAGATGGCAAAAA+TGG | + | chr4_2:2415642-2415661 | None:intergenic | 35.0% | |
| TTACCTATATCCTGTTGATC+TGG | + | chr4_2:2415681-2415700 | None:intergenic | 35.0% | |
| CTTATGTTCATAAGCTCTCT+AGG | + | chr4_2:2415949-2415968 | None:intergenic | 35.0% | |
| ! | AGACTGTTTAAGAGAGCTTT+TGG | + | chr4_2:2416005-2416024 | None:intergenic | 35.0% |
| ! | TTGTATTAGGTTTGGGATGT+AGG | - | chr4_2:2416088-2416107 | Msa0583710:five_prime_UTR | 35.0% |
| AGGAGAAACCTTCAACTTAA+GGG | - | chr4_2:2416272-2416291 | Msa0583710:five_prime_UTR | 35.0% | |
| ! | ATGTCATCATCTAGCTTACT+TGG | - | chr4_2:2416355-2416374 | Msa0583710:five_prime_UTR | 35.0% |
| ! | AGAGAGAAACAAGTGTTGCT+GGG | + | chr4_2:2409040-2409059 | None:intergenic | 40.0% |
| TACCTTAAACTTCTTCGTGG+GGG | - | chr4_2:2409266-2409285 | Msa0583710:intron | 40.0% | |
| ATTCATATACGGTGGTGTGT+TGG | - | chr4_2:2410265-2410284 | Msa0583710:intron | 40.0% | |
| !! | CTTGCTATGCATTTTTCTGC+CGG | - | chr4_2:2410481-2410500 | Msa0583710:intron | 40.0% |
| TTAGGATGAATGCATCCTTC+CGG | + | chr4_2:2410503-2410522 | None:intergenic | 40.0% | |
| TCAAAGCTGAAGAGTTGAGA+AGG | - | chr4_2:2410645-2410664 | Msa0583710:CDS | 40.0% | |
| CAGTTGTGAAAGAGAGAAGA+TGG | + | chr4_2:2410988-2411007 | None:intergenic | 40.0% | |
| TTGAATTGCTAGCAAGGAGA+TGG | + | chr4_2:2411028-2411047 | None:intergenic | 40.0% | |
| !! | CACTATGTTTTTGTAGCCGT+TGG | - | chr4_2:2411102-2411121 | Msa0583710:intron | 40.0% |
| GGAGACAATGGTCTCTATAT+TGG | - | chr4_2:2411234-2411253 | Msa0583710:intron | 40.0% | |
| AGAAATGGAAGTTTGCGTGT+TGG | - | chr4_2:2411257-2411276 | Msa0583710:intron | 40.0% | |
| TTATTGGACAGCTGTAAGAC+AGG | - | chr4_2:2411465-2411484 | Msa0583710:CDS | 40.0% | |
| ! | CATAGATGATGATGTTGCGT+TGG | - | chr4_2:2411551-2411570 | Msa0583710:intron | 40.0% |
| GACAACATTAGAGAGAGTTG+GGG | - | chr4_2:2411611-2411630 | Msa0583710:intron | 40.0% | |
| GAACATGTAGAGAGAAGACT+TGG | - | chr4_2:2411687-2411706 | Msa0583710:intron | 40.0% | |
| ACATGTAGAGAGAAGACTTG+GGG | - | chr4_2:2411689-2411708 | Msa0583710:intron | 40.0% | |
| ! | GACTTGGGGATTTTGTAGTA+AGG | - | chr4_2:2411703-2411722 | Msa0583710:intron | 40.0% |
| AGTAAGGAGAGTAGATCGAA+TGG | - | chr4_2:2411719-2411738 | Msa0583710:intron | 40.0% | |
| TGCCTAGTTTCCTACTCTTA+TGG | - | chr4_2:2411911-2411930 | Msa0583710:intron | 40.0% | |
| GCATCAGTTGTGTGATTGTT+TGG | + | chr4_2:2412092-2412111 | None:intergenic | 40.0% | |
| !! | GCTGTTTTCATGAGCTATTC+TGG | - | chr4_2:2412658-2412677 | Msa0583710:intron | 40.0% |
| GGTAAGAATTTACCAGGCAT+AGG | + | chr4_2:2413177-2413196 | None:intergenic | 40.0% | |
| AGCTGCTCAAGTACATATCT+AGG | - | chr4_2:2413280-2413299 | Msa0583710:CDS | 40.0% | |
| ! | GAATCACCCTCCCTTTTAAT+AGG | - | chr4_2:2413340-2413359 | Msa0583710:CDS | 40.0% |
| TTCGACCCTATTAAAAGGGA+GGG | + | chr4_2:2413349-2413368 | None:intergenic | 40.0% | |
| CATGCTTCGACCCTATTAAA+AGG | + | chr4_2:2413354-2413373 | None:intergenic | 40.0% | |
| ! | AGGTTCCAAAAGTGCATTGA+TGG | + | chr4_2:2413426-2413445 | None:intergenic | 40.0% |
| CTTTCCTTTCTTGTCCTTGA+TGG | - | chr4_2:2413712-2413731 | Msa0583710:intron | 40.0% | |
| CAAATATTCTCAGGCCATCA+AGG | + | chr4_2:2413729-2413748 | None:intergenic | 40.0% | |
| !! | AGACCTTTGGTGTTAAACGA+TGG | - | chr4_2:2413790-2413809 | Msa0583710:intron | 40.0% |
| ! | TGTAGTACTGGATATCCCAT+AGG | + | chr4_2:2413926-2413945 | None:intergenic | 40.0% |
| TTCCCAGAATTCATCCGAAT+GGG | + | chr4_2:2414049-2414068 | None:intergenic | 40.0% | |
| ATTCCCAGAATTCATCCGAA+TGG | + | chr4_2:2414050-2414069 | None:intergenic | 40.0% | |
| TGGTTATTGAAGCATGGTGA+TGG | - | chr4_2:2414645-2414664 | Msa0583710:intron | 40.0% | |
| GCTCCTATGATTCCACAAAA+CGG | - | chr4_2:2414688-2414707 | Msa0583710:intron | 40.0% | |
| ! | GTACCGTTTTGTGGAATCAT+AGG | + | chr4_2:2414694-2414713 | None:intergenic | 40.0% |
| ! | GATGACATTGTACCGTTTTG+TGG | + | chr4_2:2414703-2414722 | None:intergenic | 40.0% |
| AACCGCAGATTTACCAAACT+TGG | - | chr4_2:2414945-2414964 | Msa0583710:intron | 40.0% | |
| ACCGCAGATTTACCAAACTT+GGG | - | chr4_2:2414946-2414965 | Msa0583710:intron | 40.0% | |
| TCCCAAGTTTGGTAAATCTG+CGG | + | chr4_2:2414950-2414969 | None:intergenic | 40.0% | |
| TCCCTCTGGTCTCAAATATA+AGG | - | chr4_2:2415052-2415071 | Msa0583710:intron | 40.0% | |
| ACATAAGCACTTACTACTCC+GGG | + | chr4_2:2415167-2415186 | None:intergenic | 40.0% | |
| AGCAACATGTCTGAATCAGA+TGG | + | chr4_2:2415651-2415670 | None:intergenic | 40.0% | |
| TCTCCAGATCAACAGGATAT+AGG | - | chr4_2:2415675-2415694 | Msa0583710:intron | 40.0% | |
| AGTCTCGCAAGTATTTATGC+CGG | - | chr4_2:2416020-2416039 | Msa0583710:intron | 40.0% | |
| ATCCCAAACCTAATACAACC+TGG | + | chr4_2:2416086-2416105 | None:intergenic | 40.0% | |
| GAGGAGAAACCTTCAACTTA+AGG | - | chr4_2:2416271-2416290 | Msa0583710:five_prime_UTR | 40.0% | |
| GGAGAAACCTTCAACTTAAG+GGG | - | chr4_2:2416273-2416292 | Msa0583710:five_prime_UTR | 40.0% | |
| CTATACTGTAACCGAAGTGT+AGG | - | chr4_2:2416386-2416405 | Msa0583710:five_prime_UTR | 40.0% | |
| ! | CAGAGAGAAACAAGTGTTGC+TGG | + | chr4_2:2409041-2409060 | None:intergenic | 45.0% |
| AACCCCCACGAAGAAGTTTA+AGG | + | chr4_2:2409271-2409290 | None:intergenic | 45.0% | |
| ATTCAGGAACTGGGTATGTG+AGG | - | chr4_2:2409357-2409376 | Msa0583710:intron | 45.0% | |
| GCGAACAATCTTGAGTTCAG+TGG | - | chr4_2:2410296-2410315 | Msa0583710:intron | 45.0% | |
| ! | CTATGCATTTTTCTGCCGGA+AGG | - | chr4_2:2410485-2410504 | Msa0583710:intron | 45.0% |
| GGAAGGATGCATTCATCCTA+AGG | - | chr4_2:2410502-2410521 | Msa0583710:CDS | 45.0% | |
| ATCTTGTATGTGACCCGTTG+TGG | - | chr4_2:2410758-2410777 | Msa0583710:CDS | 45.0% | |
| CTGGCAATACATGGAGACAA+TGG | - | chr4_2:2411222-2411241 | Msa0583710:intron | 45.0% | |
| GTAAGACAGGCGATGTTGTA+CGG | - | chr4_2:2411478-2411497 | Msa0583710:CDS | 45.0% | |
| TAAGACAGGCGATGTTGTAC+GGG | - | chr4_2:2411479-2411498 | Msa0583710:CDS | 45.0% | |
| ATGATGTTGCGTTGGATGTG+TGG | - | chr4_2:2411559-2411578 | Msa0583710:intron | 45.0% | |
| !! | AGATGGTGGAAACTAGGCTT+AGG | - | chr4_2:2411658-2411677 | Msa0583710:intron | 45.0% |
| AAGGAGAGTAGATCGAATGG+AGG | - | chr4_2:2411722-2411741 | Msa0583710:intron | 45.0% | |
| AGGAGAGTAGATCGAATGGA+GGG | - | chr4_2:2411723-2411742 | Msa0583710:intron | 45.0% | |
| GAGGGGAATCAAATCACTAG+AGG | - | chr4_2:2411741-2411760 | Msa0583710:intron | 45.0% | |
| ! | CAAGTCTTATCCCACTAGTG+GGG | + | chr4_2:2411853-2411872 | None:intergenic | 45.0% |
| ! | CCAAGTCTTATCCCACTAGT+GGG | + | chr4_2:2411854-2411873 | None:intergenic | 45.0% |
| ! | ACCAAGTCTTATCCCACTAG+TGG | + | chr4_2:2411855-2411874 | None:intergenic | 45.0% |
| CGCCATAAGAGTAGGAAACT+AGG | + | chr4_2:2411916-2411935 | None:intergenic | 45.0% | |
| GTTTGCATCGCCATAAGAGT+AGG | + | chr4_2:2411924-2411943 | None:intergenic | 45.0% | |
| TAGCAAAAAGGTTTCACGGC+AGG | - | chr4_2:2412154-2412173 | Msa0583710:intron | 45.0% | |
| AATCGGGCAAAGATAGATCC+CGG | - | chr4_2:2412396-2412415 | Msa0583710:CDS | 45.0% | |
| CTACCAAGAGCTGTAAATCC+GGG | + | chr4_2:2412417-2412436 | None:intergenic | 45.0% | |
| CCTACCAAGAGCTGTAAATC+CGG | + | chr4_2:2412418-2412437 | None:intergenic | 45.0% | |
| AGCTCTTGGTAGGCATCTTT+AGG | - | chr4_2:2412425-2412444 | Msa0583710:CDS | 45.0% | |
| AAACTTGTGTGACCTTGCTC+TGG | - | chr4_2:2412955-2412974 | Msa0583710:intron | 45.0% | |
| AGTGTGGCAGAAGTTAGAAG+AGG | - | chr4_2:2412999-2413018 | Msa0583710:intron | 45.0% | |
| ! | AATGGAACCTTTGGAGGCAT+GGG | + | chr4_2:2413129-2413148 | None:intergenic | 45.0% |
| ATTGGAGCCAATGGAACCTT+TGG | + | chr4_2:2413138-2413157 | None:intergenic | 45.0% | |
| CCATTCTGTATTGGAGCCAA+TGG | + | chr4_2:2413147-2413166 | None:intergenic | 45.0% | |
| !! | CCATTGGCTCCAATACAGAA+TGG | - | chr4_2:2413144-2413163 | Msa0583710:intron | 45.0% |
| ! | GGGTGGATTCCATTCTGTAT+TGG | + | chr4_2:2413156-2413175 | None:intergenic | 45.0% |
| AGAATTTACCAGGCATAGGG+TGG | + | chr4_2:2413173-2413192 | None:intergenic | 45.0% | |
| GAGAGGGGTAAGAATTTACC+AGG | + | chr4_2:2413183-2413202 | None:intergenic | 45.0% | |
| AAAAGGGAGGGTGATTCCAT+AGG | + | chr4_2:2413337-2413356 | None:intergenic | 45.0% | |
| CTTCGACCCTATTAAAAGGG+AGG | + | chr4_2:2413350-2413369 | None:intergenic | 45.0% | |
| TTGACTGCGCTGCAAACAAA+TGG | + | chr4_2:2413896-2413915 | None:intergenic | 45.0% | |
| ATAGGATGCTGCTGTAGTAC+TGG | + | chr4_2:2413938-2413957 | None:intergenic | 45.0% | |
| ATGACAACTTGACATGCCCA+TGG | + | chr4_2:2413990-2414009 | None:intergenic | 45.0% | |
| ACCCCATTCGGATGAATTCT+GGG | - | chr4_2:2414044-2414063 | Msa0583710:intron | 45.0% | |
| TCCCAGAATTCATCCGAATG+GGG | + | chr4_2:2414048-2414067 | None:intergenic | 45.0% | |
| GGTTAATTGGTTGAATGCGG+AGG | - | chr4_2:2414577-2414596 | Msa0583710:intron | 45.0% | |
| GGAATCATAGGAGCCATATC+AGG | + | chr4_2:2414682-2414701 | None:intergenic | 45.0% | |
| ! | ACTCACTGGCATTTCTGAGA+CGG | + | chr4_2:2414725-2414744 | None:intergenic | 45.0% |
| TCTGATGTGGTAAGTTCGGT+AGG | - | chr4_2:2414841-2414860 | Msa0583710:intron | 45.0% | |
| ! | GAATGGGATTTCTAGATCGC+TGG | - | chr4_2:2414888-2414907 | Msa0583710:intron | 45.0% |
| GATCGCTGGATCAAATTCAG+TGG | - | chr4_2:2414902-2414921 | Msa0583710:intron | 45.0% | |
| GCAGATTTACCAAACTTGGG+AGG | - | chr4_2:2414949-2414968 | Msa0583710:intron | 45.0% | |
| ! | TTGAAGTCTTAGGGCTTGCT+TGG | + | chr4_2:2415531-2415550 | None:intergenic | 45.0% |
| GTGGTACTCTTTGCAGATCT+TGG | - | chr4_2:2415591-2415610 | Msa0583710:intron | 45.0% | |
| TTTGCAGATCTTGGAGCTCT+AGG | - | chr4_2:2415600-2415619 | Msa0583710:intron | 45.0% | |
| !! | TGGAGCTCTAGGAAACTATC+CGG | - | chr4_2:2415611-2415630 | Msa0583710:intron | 45.0% |
| GCTTGAATCTCCAGATCAAC+AGG | - | chr4_2:2415668-2415687 | Msa0583710:intron | 45.0% | |
| CGCCAGGTTGTATTAGGTTT+GGG | - | chr4_2:2416081-2416100 | Msa0583710:intron | 45.0% | |
| ! | TCATCTGATTGAGAGCATGG+AGG | + | chr4_2:2416253-2416272 | None:intergenic | 45.0% |
| TCCATGCTCTCAATCAGATG+AGG | - | chr4_2:2416252-2416271 | Msa0583710:five_prime_UTR | 45.0% | |
| TCCTCATCTGATTGAGAGCA+TGG | + | chr4_2:2416256-2416275 | None:intergenic | 45.0% | |
| GAAACCTTCAACTTAAGGGG+AGG | - | chr4_2:2416276-2416295 | Msa0583710:five_prime_UTR | 45.0% | |
| !! | CTTTCCTCCCCTTAAGTTGA+AGG | + | chr4_2:2416283-2416302 | None:intergenic | 45.0% |
| ! | ATCTAGCTTACTTGGCATGC+AGG | - | chr4_2:2416363-2416382 | Msa0583710:five_prime_UTR | 45.0% |
| AGATAAGGCTGCCTACACTT+CGG | + | chr4_2:2416400-2416419 | None:intergenic | 45.0% | |
| !! | AAAAATCTATATATTATATT+TGG | + | chr4_2:2413601-2413620 | None:intergenic | 5.0% |
| !! | ATATATTATATAATAAGATA+AGG | + | chr4_2:2416415-2416434 | None:intergenic | 5.0% |
| GAGAGAGAGAGAGAGAGAGA+GGG | + | chr4_2:2408985-2409004 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | + | chr4_2:2408986-2409005 | None:intergenic | 50.0% | |
| ! | CTTTGAGGGGTTGCAGATTC+AGG | - | chr4_2:2409341-2409360 | Msa0583710:intron | 50.0% |
| GGGTTGCAGATTCAGGAACT+GGG | - | chr4_2:2409348-2409367 | Msa0583710:intron | 50.0% | |
| ! | TTTTTGTAGCCGTTGGCGAC+TGG | - | chr4_2:2411109-2411128 | Msa0583710:intron | 50.0% |
| CATCTATCTCCAGTCGCCAA+CGG | + | chr4_2:2411121-2411140 | None:intergenic | 50.0% | |
| TGGTGGAAACTAGGCTTAGG+TGG | - | chr4_2:2411661-2411680 | Msa0583710:intron | 50.0% | |
| GGAGAGTAGATCGAATGGAG+GGG | - | chr4_2:2411724-2411743 | Msa0583710:intron | 50.0% | |
| ATGTAGCTGACCCCACTAGT+GGG | - | chr4_2:2411840-2411859 | Msa0583710:intron | 50.0% | |
| CCCACTAGTGGGATAAGACT+TGG | - | chr4_2:2411851-2411870 | Msa0583710:intron | 50.0% | |
| GATGCTCCTGTTGCAGATTC+AGG | - | chr4_2:2412107-2412126 | Msa0583710:intron | 50.0% | |
| GATCCCGGATTTACAGCTCT+TGG | - | chr4_2:2412411-2412430 | Msa0583710:CDS | 50.0% | |
| CCGGATTTACAGCTCTTGGT+AGG | - | chr4_2:2412415-2412434 | Msa0583710:CDS | 50.0% | |
| ! | CAATGGAACCTTTGGAGGCA+TGG | + | chr4_2:2413130-2413149 | None:intergenic | 50.0% |
| CATGCCTCCAAAGGTTCCAT+TGG | - | chr4_2:2413128-2413147 | Msa0583710:intron | 50.0% | |
| AATGGAATCCACCCTATGCC+TGG | - | chr4_2:2413162-2413181 | Msa0583710:intron | 50.0% | |
| AGGGTCGAAGCATGAGAACA+AGG | - | chr4_2:2413360-2413379 | Msa0583710:CDS | 50.0% | |
| CAGGCCATCAAGGACAAGAA+AGG | + | chr4_2:2413719-2413738 | None:intergenic | 50.0% | |
| TCAGCCTCATATGGACTCCA+TGG | - | chr4_2:2413970-2413989 | Msa0583710:intron | 50.0% | |
| CAGCCTCATATGGACTCCAT+GGG | - | chr4_2:2413971-2413990 | Msa0583710:intron | 50.0% | |
| ATGCCCATGGAGTCCATATG+AGG | + | chr4_2:2413977-2413996 | None:intergenic | 50.0% | |
| ! | GGGCATGTCAAGTTGTCATG+TGG | - | chr4_2:2413991-2414010 | Msa0583710:intron | 50.0% |
| CGAATGGGGTGGAAATTGCT+CGG | + | chr4_2:2414034-2414053 | None:intergenic | 50.0% | |
| CGAGCAATTTCCACCCCATT+CGG | - | chr4_2:2414032-2414051 | Msa0583710:intron | 50.0% | |
| CAGAATTCATCCGAATGGGG+TGG | + | chr4_2:2414045-2414064 | None:intergenic | 50.0% | |
| CACCCCATTCGGATGAATTC+TGG | - | chr4_2:2414043-2414062 | Msa0583710:intron | 50.0% | |
| CATGACGGCCACAATGATCA+AGG | + | chr4_2:2414274-2414293 | None:intergenic | 50.0% | |
| ATTGTGGCCGTCATGCACTT+AGG | - | chr4_2:2414279-2414298 | Msa0583710:intron | 50.0% | |
| ACCACTGATGTTGGACTCAC+TGG | + | chr4_2:2414739-2414758 | None:intergenic | 50.0% | |
| CCACTCGATACCACTGATGT+TGG | + | chr4_2:2414748-2414767 | None:intergenic | 50.0% | |
| ! | CCAACATCAGTGGTATCGAG+TGG | - | chr4_2:2414745-2414764 | Msa0583710:intron | 50.0% |
| !! | CTTGCTTGGTGTCGACAGAT+TGG | + | chr4_2:2415517-2415536 | None:intergenic | 50.0% |
| !! | GGAGCTCTAGGAAACTATCC+GGG | - | chr4_2:2415612-2415631 | Msa0583710:intron | 50.0% |
| GATGGCAAAAATGGCGAACC+CGG | + | chr4_2:2415633-2415652 | None:intergenic | 50.0% | |
| CCTAATACAACCTGGCGCAT+TGG | + | chr4_2:2416078-2416097 | None:intergenic | 50.0% | |
| CCAATGCGCCAGGTTGTATT+AGG | - | chr4_2:2416075-2416094 | Msa0583710:intron | 50.0% | |
| GCGCCAGGTTGTATTAGGTT+TGG | - | chr4_2:2416080-2416099 | Msa0583710:intron | 50.0% | |
| GGGGTTGCAGATTCAGGAAC+TGG | - | chr4_2:2409347-2409366 | Msa0583710:intron | 55.0% | |
| GATGTAGCTGACCCCACTAG+TGG | - | chr4_2:2411839-2411858 | Msa0583710:intron | 55.0% | |
| GCTGAGCCTGAATCTGCAAC+AGG | + | chr4_2:2412116-2412135 | None:intergenic | 55.0% | |
| ! | GAAGTGTCCCATGCCTCCAA+AGG | - | chr4_2:2413119-2413138 | Msa0583710:intron | 55.0% |
| GGAGCCAATGGAACCTTTGG+AGG | + | chr4_2:2413135-2413154 | None:intergenic | 55.0% | |
| GTCCATATGAGGCTGACCTG+CGG | + | chr4_2:2413966-2413985 | None:intergenic | 55.0% | |
| !! | GGTGGAAATTGCTCGGTGCA+GGG | + | chr4_2:2414027-2414046 | None:intergenic | 55.0% |
| GGACCACAGTGCTCCTGATA+TGG | - | chr4_2:2414666-2414685 | Msa0583710:intron | 55.0% | |
| !! | GAGCCATATCAGGAGCACTG+TGG | + | chr4_2:2414672-2414691 | None:intergenic | 55.0% |
| GCCAGTGAGTCCAACATCAG+TGG | - | chr4_2:2414735-2414754 | Msa0583710:intron | 55.0% | |
| GGTAGGATTGCAGCTTGCAC+CGG | - | chr4_2:2414858-2414877 | Msa0583710:intron | 55.0% | |
| GAAATCCCATTCCCGCCATC+CGG | + | chr4_2:2414880-2414899 | None:intergenic | 55.0% | |
| TTGAAACAGGCCAATGCGCC+AGG | - | chr4_2:2416065-2416084 | Msa0583710:intron | 55.0% | |
| ATATGAGGCTGACCTGCGGC+TGG | + | chr4_2:2413962-2413981 | None:intergenic | 60.0% | |
| AGCCGCAGGTCAGCCTCATA+TGG | - | chr4_2:2413961-2413980 | Msa0583710:intron | 60.0% | |
| !! | GGGTGGAAATTGCTCGGTGC+AGG | + | chr4_2:2414028-2414047 | None:intergenic | 60.0% |
| GGATTGCAGCTTGCACCGGA+TGG | - | chr4_2:2414862-2414881 | Msa0583710:intron | 60.0% | |
| TTGCAGCTTGCACCGGATGG+CGG | - | chr4_2:2414865-2414884 | Msa0583710:intron | 60.0% | |
| !! | TTGCACCGGATGGCGGGAAT+GGG | - | chr4_2:2414872-2414891 | Msa0583710:intron | 60.0% |
| CAGCATCCTATGCCAGCCGC+AGG | - | chr4_2:2413947-2413966 | Msa0583710:intron | 65.0% | |
| TGCAGCTTGCACCGGATGGC+GGG | - | chr4_2:2414866-2414885 | Msa0583710:intron | 65.0% | |
| !! | CTTGCACCGGATGGCGGGAA+TGG | - | chr4_2:2414871-2414890 | Msa0583710:intron | 65.0% |
| GGCTGACCTGCGGCTGGCAT+AGG | + | chr4_2:2413956-2413975 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 2408920 | 2416542 | 2408920 | ID=Msa0583710;Name=Msa0583710 |
| chr4_2 | mRNA | 2408920 | 2416542 | 2408920 | ID=Msa0583710-mRNA-1;Parent=Msa0583710;Name=Msa0583710-mRNA-1;_AED=0.18;_eAED=0.19;_QI=580|0.87|0.88|1|0.75|0.77|9|0|348 |
| chr4_2 | exon | 2408920 | 2408942 | 2408920 | ID=Msa0583710-mRNA-1:exon:693;Parent=Msa0583710-mRNA-1 |
| chr4_2 | exon | 2409766 | 2409855 | 2409766 | ID=Msa0583710-mRNA-1:exon:692;Parent=Msa0583710-mRNA-1 |
| chr4_2 | exon | 2410492 | 2410805 | 2410492 | ID=Msa0583710-mRNA-1:exon:691;Parent=Msa0583710-mRNA-1 |
| chr4_2 | exon | 2411391 | 2411550 | 2411391 | ID=Msa0583710-mRNA-1:exon:690;Parent=Msa0583710-mRNA-1 |
| chr4_2 | exon | 2412279 | 2412461 | 2412279 | ID=Msa0583710-mRNA-1:exon:689;Parent=Msa0583710-mRNA-1 |
| chr4_2 | exon | 2413030 | 2413135 | 2413030 | ID=Msa0583710-mRNA-1:exon:688;Parent=Msa0583710-mRNA-1 |
| chr4_2 | exon | 2413275 | 2413430 | 2413275 | ID=Msa0583710-mRNA-1:exon:687;Parent=Msa0583710-mRNA-1 |
| chr4_2 | exon | 2415071 | 2415206 | 2415071 | ID=Msa0583710-mRNA-1:exon:686;Parent=Msa0583710-mRNA-1 |
| chr4_2 | exon | 2416084 | 2416542 | 2416084 | ID=Msa0583710-mRNA-1:exon:685;Parent=Msa0583710-mRNA-1 |
| chr4_2 | five_prime_UTR | 2416084 | 2416542 | 2416084 | ID=Msa0583710-mRNA-1:five_prime_utr;Parent=Msa0583710-mRNA-1 |
| chr4_2 | five_prime_UTR | 2415086 | 2415206 | 2415086 | ID=Msa0583710-mRNA-1:five_prime_utr;Parent=Msa0583710-mRNA-1 |
| chr4_2 | CDS | 2415071 | 2415085 | 2415071 | ID=Msa0583710-mRNA-1:cds;Parent=Msa0583710-mRNA-1 |
| chr4_2 | CDS | 2413275 | 2413430 | 2413275 | ID=Msa0583710-mRNA-1:cds;Parent=Msa0583710-mRNA-1 |
| chr4_2 | CDS | 2413030 | 2413135 | 2413030 | ID=Msa0583710-mRNA-1:cds;Parent=Msa0583710-mRNA-1 |
| chr4_2 | CDS | 2412279 | 2412461 | 2412279 | ID=Msa0583710-mRNA-1:cds;Parent=Msa0583710-mRNA-1 |
| chr4_2 | CDS | 2411391 | 2411550 | 2411391 | ID=Msa0583710-mRNA-1:cds;Parent=Msa0583710-mRNA-1 |
| chr4_2 | CDS | 2410492 | 2410805 | 2410492 | ID=Msa0583710-mRNA-1:cds;Parent=Msa0583710-mRNA-1 |
| chr4_2 | CDS | 2409766 | 2409855 | 2409766 | ID=Msa0583710-mRNA-1:cds;Parent=Msa0583710-mRNA-1 |
| chr4_2 | CDS | 2408920 | 2408942 | 2408920 | ID=Msa0583710-mRNA-1:cds;Parent=Msa0583710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
