Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0594620 | XP_003605087.1 | 86.572 | 283 | 18 | 1 | 1 | 263 | 47 | 329 | 9.60e-173 | 489 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0594620 | sp|Q40316|VESTR_MEDSA | 46.809 | 282 | 130 | 2 | 1 | 263 | 46 | 326 | 2.32e-84 | 258 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0536770 | Msa0594620 | 0.817840 | 2.676215e-52 | -8.615850e-47 |
| Msa0594620 | Msa0594630 | 0.876802 | 1.044733e-68 | -8.615850e-47 |
| Msa0594620 | Msa0632980 | 0.847816 | 9.101435e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0594620 | MtrunA17_Chr4g0010991 | 86.572 | 283 | 18 | 1 | 1 | 263 | 47 | 329 | 8.83e-177 | 489 |
| Msa0594620 | MtrunA17_Chr7g0245631 | 46.454 | 282 | 131 | 2 | 1 | 263 | 46 | 326 | 4.04e-85 | 257 |
| Msa0594620 | MtrunA17_Chr7g0245691 | 45.965 | 285 | 131 | 3 | 1 | 263 | 47 | 330 | 7.09e-81 | 246 |
| Msa0594620 | MtrunA17_Chr7g0245741 | 45.936 | 283 | 131 | 3 | 1 | 263 | 46 | 326 | 1.86e-79 | 242 |
| Msa0594620 | MtrunA17_Chr7g0245671 | 44.211 | 285 | 136 | 2 | 1 | 263 | 46 | 329 | 1.62e-77 | 238 |
| Msa0594620 | MtrunA17_Chr7g0245641 | 45.423 | 284 | 133 | 3 | 1 | 263 | 84 | 366 | 8.02e-77 | 237 |
| Msa0594620 | MtrunA17_Chr7g0245711 | 45.230 | 283 | 133 | 3 | 1 | 263 | 8 | 288 | 5.32e-75 | 230 |
| Msa0594620 | MtrunA17_Chr7g0245731 | 45.230 | 283 | 133 | 3 | 1 | 263 | 96 | 376 | 1.03e-73 | 229 |
| Msa0594620 | MtrunA17_Chr1g0155411 | 37.456 | 283 | 155 | 2 | 1 | 263 | 45 | 325 | 1.11e-67 | 213 |
| Msa0594620 | MtrunA17_Chr1g0155431 | 37.102 | 283 | 156 | 2 | 1 | 263 | 45 | 325 | 7.02e-66 | 208 |
| Msa0594620 | MtrunA17_Chr4g0048961 | 31.541 | 279 | 159 | 6 | 13 | 262 | 62 | 337 | 1.81e-41 | 145 |
| Msa0594620 | MtrunA17_Chr4g0042101 | 32.215 | 298 | 161 | 6 | 3 | 263 | 60 | 353 | 2.40e-41 | 145 |
| Msa0594620 | MtrunA17_Chr2g0331211 | 29.965 | 287 | 168 | 7 | 1 | 263 | 42 | 319 | 6.34e-37 | 133 |
| Msa0594620 | MtrunA17_Chr2g0281991 | 29.568 | 301 | 169 | 8 | 1 | 263 | 45 | 340 | 2.28e-32 | 121 |
| Msa0594620 | MtrunA17_Chr4g0002661 | 32.867 | 286 | 154 | 11 | 3 | 263 | 51 | 323 | 1.42e-31 | 119 |
| Msa0594620 | MtrunA17_Chr7g0275521 | 29.373 | 303 | 162 | 8 | 4 | 263 | 47 | 340 | 9.79e-31 | 117 |
| Msa0594620 | MtrunA17_Chr2g0291541 | 30.851 | 282 | 159 | 13 | 8 | 263 | 55 | 326 | 2.47e-30 | 115 |
| Msa0594620 | MtrunA17_Chr5g0423551 | 27.622 | 286 | 177 | 7 | 1 | 263 | 41 | 319 | 6.14e-28 | 108 |
| Msa0594620 | MtrunA17_Chr3g0077231 | 30.131 | 229 | 136 | 4 | 1 | 208 | 43 | 268 | 5.15e-27 | 106 |
| Msa0594620 | MtrunA17_Chr3g0106111 | 28.328 | 293 | 161 | 11 | 3 | 263 | 44 | 319 | 2.23e-26 | 104 |
| Msa0594620 | MtrunA17_Chr2g0282001 | 27.483 | 302 | 170 | 9 | 1 | 261 | 44 | 337 | 4.97e-26 | 104 |
| Msa0594620 | MtrunA17_Chr8g0364051 | 31.169 | 231 | 136 | 5 | 3 | 213 | 47 | 274 | 6.30e-26 | 103 |
| Msa0594620 | MtrunA17_Chr4g0001321 | 30.175 | 285 | 164 | 10 | 2 | 263 | 54 | 326 | 9.64e-26 | 103 |
| Msa0594620 | MtrunA17_Chr3g0077221 | 29.825 | 228 | 134 | 7 | 3 | 208 | 49 | 272 | 3.85e-25 | 101 |
| Msa0594620 | MtrunA17_Chr5g0431311 | 29.758 | 289 | 162 | 11 | 3 | 263 | 44 | 319 | 8.38e-25 | 100 |
| Msa0594620 | MtrunA17_Chr4g0002961 | 30.769 | 286 | 160 | 9 | 3 | 263 | 51 | 323 | 2.25e-24 | 99.8 |
| Msa0594620 | MtrunA17_Chr2g0282011 | 26.246 | 301 | 175 | 7 | 1 | 261 | 45 | 338 | 2.88e-24 | 99.8 |
| Msa0594620 | MtrunA17_Chr2g0333781 | 29.021 | 286 | 166 | 11 | 2 | 263 | 57 | 329 | 5.18e-24 | 99.0 |
| Msa0594620 | MtrunA17_Chr8g0363831 | 27.273 | 231 | 145 | 5 | 3 | 213 | 48 | 275 | 6.00e-24 | 98.6 |
| Msa0594620 | MtrunA17_Chr4g0039321 | 29.478 | 268 | 149 | 11 | 3 | 242 | 48 | 303 | 6.21e-24 | 98.6 |
| Msa0594620 | MtrunA17_Chr4g0039311 | 28.992 | 238 | 137 | 6 | 3 | 216 | 50 | 279 | 6.38e-21 | 90.1 |
| Msa0594620 | MtrunA17_Chr5g0411071 | 28.866 | 194 | 118 | 8 | 11 | 189 | 55 | 243 | 7.52e-13 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0594620 | AT2G45400.3 | 44.792 | 288 | 132 | 5 | 1 | 263 | 22 | 307 | 1.97e-76 | 234 |
| Msa0594620 | AT2G45400.1 | 44.792 | 288 | 132 | 5 | 1 | 263 | 79 | 364 | 7.10e-76 | 235 |
| Msa0594620 | AT2G45400.2 | 45.570 | 237 | 104 | 4 | 1 | 212 | 79 | 315 | 5.66e-63 | 201 |
| Msa0594620 | AT5G42800.1 | 36.749 | 283 | 157 | 2 | 1 | 263 | 45 | 325 | 1.20e-60 | 196 |
| Msa0594620 | AT2G45400.4 | 54.487 | 156 | 66 | 2 | 1 | 151 | 79 | 234 | 2.58e-50 | 166 |
| Msa0594620 | AT1G61720.1 | 32.993 | 294 | 160 | 7 | 1 | 263 | 50 | 337 | 7.08e-50 | 167 |
| Msa0594620 | AT4G35420.1 | 32.517 | 286 | 161 | 7 | 1 | 263 | 45 | 321 | 5.94e-45 | 154 |
| Msa0594620 | AT2G02400.1 | 29.268 | 287 | 168 | 10 | 2 | 263 | 42 | 318 | 8.84e-32 | 119 |
| Msa0594620 | AT4G27250.2 | 29.893 | 281 | 166 | 6 | 3 | 254 | 49 | 327 | 1.14e-30 | 117 |
| Msa0594620 | AT4G27250.1 | 29.897 | 291 | 163 | 8 | 3 | 254 | 49 | 337 | 2.32e-30 | 116 |
| Msa0594620 | AT2G33590.1 | 32.353 | 272 | 138 | 9 | 2 | 243 | 46 | 301 | 7.22e-30 | 114 |
| Msa0594620 | AT1G68540.1 | 27.875 | 287 | 177 | 7 | 1 | 263 | 41 | 321 | 6.07e-29 | 112 |
| Msa0594620 | AT1G09510.1 | 31.278 | 227 | 132 | 4 | 3 | 208 | 47 | 270 | 5.96e-27 | 107 |
| Msa0594620 | AT5G19440.1 | 29.577 | 284 | 165 | 9 | 3 | 261 | 49 | 322 | 8.07e-27 | 106 |
| Msa0594620 | AT1G51410.1 | 30.603 | 232 | 135 | 5 | 3 | 212 | 48 | 275 | 8.98e-27 | 106 |
| Msa0594620 | AT1G09480.2 | 29.123 | 285 | 169 | 7 | 3 | 263 | 47 | 322 | 1.99e-26 | 105 |
| Msa0594620 | AT1G25460.1 | 26.552 | 290 | 176 | 7 | 1 | 263 | 40 | 319 | 2.89e-26 | 105 |
| Msa0594620 | AT1G09480.1 | 29.123 | 285 | 169 | 7 | 3 | 263 | 94 | 369 | 4.80e-26 | 105 |
| Msa0594620 | AT1G76470.1 | 33.712 | 264 | 147 | 6 | 3 | 243 | 45 | 303 | 6.74e-26 | 103 |
| Msa0594620 | AT1G66800.1 | 30.222 | 225 | 135 | 5 | 2 | 208 | 46 | 266 | 3.30e-25 | 102 |
| Msa0594620 | AT5G58490.1 | 30.137 | 292 | 157 | 11 | 3 | 263 | 48 | 323 | 1.60e-24 | 100 |
| Msa0594620 | AT2G33600.1 | 32.453 | 265 | 147 | 8 | 2 | 243 | 46 | 301 | 1.90e-24 | 100 |
| Msa0594620 | AT1G15950.3 | 29.720 | 286 | 164 | 12 | 2 | 263 | 50 | 322 | 2.48e-24 | 100 |
| Msa0594620 | AT1G15950.1 | 29.720 | 286 | 164 | 12 | 2 | 263 | 50 | 322 | 2.48e-24 | 100 |
| Msa0594620 | AT1G80820.1 | 29.474 | 285 | 166 | 11 | 2 | 263 | 45 | 317 | 6.24e-24 | 99.0 |
| Msa0594620 | AT1G09490.2 | 28.070 | 285 | 172 | 8 | 3 | 263 | 16 | 291 | 1.66e-23 | 97.1 |
| Msa0594620 | AT1G15950.2 | 29.562 | 274 | 157 | 11 | 2 | 251 | 50 | 311 | 3.09e-23 | 97.1 |
| Msa0594620 | AT1G09490.1 | 28.070 | 285 | 172 | 8 | 3 | 263 | 47 | 322 | 3.18e-23 | 96.7 |
| Msa0594620 | AT1G09500.3 | 28.879 | 232 | 140 | 5 | 3 | 212 | 47 | 275 | 2.86e-21 | 90.9 |
| Msa0594620 | AT1G09500.2 | 28.879 | 232 | 140 | 5 | 3 | 212 | 13 | 241 | 5.42e-21 | 90.1 |
| Msa0594620 | AT1G09500.1 | 28.879 | 232 | 140 | 5 | 3 | 212 | 47 | 275 | 6.62e-21 | 90.5 |
| Msa0594620 | AT1G15950.6 | 29.915 | 234 | 131 | 9 | 2 | 212 | 50 | 273 | 5.36e-20 | 87.0 |
| Msa0594620 | AT1G15950.5 | 29.915 | 234 | 131 | 9 | 2 | 212 | 50 | 273 | 6.72e-20 | 87.0 |
| Msa0594620 | AT1G80820.2 | 29.915 | 234 | 131 | 9 | 2 | 212 | 45 | 268 | 8.50e-20 | 86.7 |
| Msa0594620 | AT1G15950.4 | 29.915 | 234 | 131 | 9 | 2 | 212 | 50 | 273 | 8.53e-20 | 87.0 |
| Msa0594620 | AT1G68540.2 | 27.273 | 220 | 131 | 7 | 67 | 263 | 1 | 214 | 3.32e-16 | 75.5 |
| Msa0594620 | AT1G15950.7 | 28.384 | 229 | 131 | 10 | 59 | 263 | 5 | 224 | 3.38e-14 | 70.9 |
Find 39 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTGTTGGATCTTCTTATT+TGG | 0.209176 | 4_2:+22683745 | Msa0594620:CDS |
| TTTGAGTGTGAAAATGTTAA+TGG | 0.229940 | 4_2:+22684365 | Msa0594620:CDS |
| GTTAGCTTCTTTGATGCTTC+TGG | 0.278137 | 4_2:-22683428 | None:intergenic |
| TTGGTTCTTCCTTTGGTTGT+TGG | 0.320036 | 4_2:+22683836 | Msa0594620:CDS |
| TGTTAGTTTGGTTCTTCCTT+TGG | 0.331534 | 4_2:+22683829 | Msa0594620:CDS |
| AACTTACTTTGGTATTGTTA+TGG | 0.339526 | 4_2:-22684465 | None:intergenic |
| TGAATTGAAGGTTGTTAGTT+TGG | 0.347694 | 4_2:+22683817 | Msa0594620:CDS |
| CTTCTCTTTACAGCATTGTA+TGG | 0.353937 | 4_2:-22685629 | None:intergenic |
| TGTAAAAGTAGTAACCTTGT+TGG | 0.375771 | 4_2:+22683731 | Msa0594620:CDS |
| CATCCATTGGGTGTGCTAGA+TGG | 0.400667 | 4_2:-22683520 | None:intergenic |
| TGAGATACTTGTATCTATCT+TGG | 0.401199 | 4_2:-22684289 | None:intergenic |
| AACATGCTTTCAAAATTCCT+AGG | 0.409374 | 4_2:-22683595 | None:intergenic |
| CAAAACTACTTGAATCATCA+AGG | 0.450303 | 4_2:-22683466 | None:intergenic |
| TTGCATTGTCAAAGATATCC+AGG | 0.453776 | 4_2:+22684437 | Msa0594620:CDS |
| AAACCAAGAGCCAGAAGAAA+AGG | 0.479277 | 4_2:+22683547 | Msa0594620:CDS |
| TGGAAAAGTGAATGAATTGA+AGG | 0.484535 | 4_2:+22683805 | Msa0594620:CDS |
| ATGTGGTGGATGAAGATGTT+TGG | 0.490382 | 4_2:+22683693 | Msa0594620:CDS |
| AAAGCAATACAAGGTTGCAT+TGG | 0.515168 | 4_2:+22683491 | Msa0594620:CDS |
| ACATGCTTTCAAAATTCCTA+GGG | 0.520879 | 4_2:-22683594 | None:intergenic |
| TAAATTTGAACCCAGCATCC+AGG | 0.527299 | 4_2:-22685576 | None:intergenic |
| AGCGTCAAAGATATGTATGA+TGG | 0.533471 | 4_2:+22685604 | Msa0594620:CDS |
| GGTATTGTTATGGTATACCC+TGG | 0.560996 | 4_2:-22684455 | None:intergenic |
| CAGAAATATAAGTGCACGAG+TGG | 0.561375 | 4_2:-22684342 | None:intergenic |
| CATACAATGCTGTAAAGAGA+AGG | 0.570151 | 4_2:+22685630 | Msa0594620:CDS |
| AGAGCAGTGGAAGGAACCCT+AGG | 0.577037 | 4_2:+22683578 | Msa0594620:CDS |
| TTACACTTCTAGTGCAGCAA+CGG | 0.577130 | 4_2:+22683646 | Msa0594620:CDS |
| GTATCTCACCAACTCATACA+TGG | 0.579056 | 4_2:+22684304 | Msa0594620:CDS |
| TTTCCATCTAGCACACCCAA+TGG | 0.583542 | 4_2:+22683517 | Msa0594620:CDS |
| CATCTTCATCCACCACATCA+AGG | 0.590859 | 4_2:-22683688 | None:intergenic |
| TTGAATCATCAAGGTCAGCA+TGG | 0.593822 | 4_2:-22683457 | None:intergenic |
| ATAAAGGGACCAACAACCAA+AGG | 0.611130 | 4_2:-22683845 | None:intergenic |
| AGTGTGAAAATGTTAATGGA+AGG | 0.611428 | 4_2:+22684369 | Msa0594620:CDS |
| ATACAATGCTGTAAAGAGAA+GGG | 0.620211 | 4_2:+22685631 | Msa0594620:CDS |
| TGATAAGAACCTTGATGTGG+TGG | 0.620407 | 4_2:+22683679 | Msa0594620:CDS |
| ATGAAATGATATTCTGTCTG+AGG | 0.636261 | 4_2:-22684402 | None:intergenic |
| CCAAATAAGAAGATCCAACA+AGG | 0.649216 | 4_2:-22683745 | None:intergenic |
| TGCATTGTCAAAGATATCCA+GGG | 0.653529 | 4_2:+22684438 | Msa0594620:CDS |
| TGTGTGCACCATGTATGAGT+TGG | 0.669747 | 4_2:-22684312 | None:intergenic |
| CAATGATAAGAACCTTGATG+TGG | 0.705051 | 4_2:+22683676 | Msa0594620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAAATTTTTTTTATAGTTTT+TGG | - | chr4_2:22685050-22685069 | None:intergenic | 10.0% |
| !!! | CAAATTTTTTTTATAGTTTT+TGG | - | chr4_2:22685050-22685069 | None:intergenic | 10.0% |
| !!! | ATATACATTTTTTTTACCTA+AGG | + | chr4_2:22683949-22683968 | Msa0594620:intron | 15.0% |
| !!! | ATATTTTTTTGTGTGTAAAT+CGG | - | chr4_2:22684067-22684086 | None:intergenic | 15.0% |
| !! | TAGGCAAAATATTATTAAAT+AGG | + | chr4_2:22684134-22684153 | Msa0594620:intron | 15.0% |
| !! | AGGCAAAATATTATTAAATA+GGG | + | chr4_2:22684135-22684154 | Msa0594620:intron | 15.0% |
| !! | TATATCTCAAATATTAGAAT+TGG | - | chr4_2:22684207-22684226 | None:intergenic | 15.0% |
| !! | AAAAAATATGAAACTTACTT+TGG | - | chr4_2:22684479-22684498 | None:intergenic | 15.0% |
| !! | CAATGACTTAATTAATATAT+AGG | + | chr4_2:22684566-22684585 | Msa0594620:intron | 15.0% |
| !! | TTAATATATAGGCTAAAATA+TGG | + | chr4_2:22684577-22684596 | Msa0594620:intron | 15.0% |
| !! | AAAACTATAAAAAAATTGCA+GGG | - | chr4_2:22684641-22684660 | None:intergenic | 15.0% |
| !! | AAAAACTATAAAAAAATTGC+AGG | - | chr4_2:22684642-22684661 | None:intergenic | 15.0% |
| !!! | TGCAATTTTTTTATAGTTTT+TGG | + | chr4_2:22684641-22684660 | Msa0594620:intron | 15.0% |
| !! | AACTATAAAAAAAAATTGCA+GGG | - | chr4_2:22684700-22684719 | None:intergenic | 15.0% |
| !! | AAACTATAAAAAAAAATTGC+AGG | - | chr4_2:22684701-22684720 | None:intergenic | 15.0% |
| !!! | GCAATTTTTTTTTATAGTTT+TGG | + | chr4_2:22684701-22684720 | Msa0594620:intron | 15.0% |
| !! | CTATAAAAAAAAAAATTGCA+GGG | - | chr4_2:22684760-22684779 | None:intergenic | 15.0% |
| !! | ACTATAAAAAAAAAAATTGC+AGG | - | chr4_2:22684761-22684780 | None:intergenic | 15.0% |
| !! | AAACTATAAAAAAAATTTGC+AGG | + | chr4_2:22685051-22685070 | Msa0594620:intron | 15.0% |
| !! | AACTATAAAAAAAATTTGCA+GGG | + | chr4_2:22685052-22685071 | Msa0594620:intron | 15.0% |
| !! | AAAACTAAAAAAAAATTTGC+AGG | + | chr4_2:22685110-22685129 | Msa0594620:intron | 15.0% |
| !! | ATATATATTAGGCTAAAATA+TGG | - | chr4_2:22685175-22685194 | None:intergenic | 15.0% |
| !! | TTAGTCATATCATATATATT+AGG | - | chr4_2:22685186-22685205 | None:intergenic | 15.0% |
| !! | AAATCTAAATAATGTATCTT+TGG | - | chr4_2:22685410-22685429 | None:intergenic | 15.0% |
| !!! | ATATACATTTTTTTTACCTA+AGG | + | chr4_2:22683949-22683968 | Msa0594620:intron | 15.0% |
| !!! | ATATTTTTTTGTGTGTAAAT+CGG | - | chr4_2:22684067-22684086 | None:intergenic | 15.0% |
| !! | TAGGCAAAATATTATTAAAT+AGG | + | chr4_2:22684134-22684153 | Msa0594620:intron | 15.0% |
| !! | AGGCAAAATATTATTAAATA+GGG | + | chr4_2:22684135-22684154 | Msa0594620:intron | 15.0% |
| !! | TATATCTCAAATATTAGAAT+TGG | - | chr4_2:22684207-22684226 | None:intergenic | 15.0% |
| !! | AAAAAATATGAAACTTACTT+TGG | - | chr4_2:22684479-22684498 | None:intergenic | 15.0% |
| !! | CAATGACTTAATTAATATAT+AGG | + | chr4_2:22684566-22684585 | Msa0594620:intron | 15.0% |
| !! | TTAATATATAGGCTAAAATA+TGG | + | chr4_2:22684577-22684596 | Msa0594620:intron | 15.0% |
| !! | AAAACTATAAAAAAATTGCA+GGG | - | chr4_2:22684641-22684660 | None:intergenic | 15.0% |
| !! | AAAAACTATAAAAAAATTGC+AGG | - | chr4_2:22684642-22684661 | None:intergenic | 15.0% |
| !!! | TGCAATTTTTTTATAGTTTT+TGG | + | chr4_2:22684641-22684660 | Msa0594620:intron | 15.0% |
| !! | AACTATAAAAAAAAATTGCA+GGG | - | chr4_2:22684700-22684719 | None:intergenic | 15.0% |
| !! | AAACTATAAAAAAAAATTGC+AGG | - | chr4_2:22684701-22684720 | None:intergenic | 15.0% |
| !!! | GCAATTTTTTTTTATAGTTT+TGG | + | chr4_2:22684701-22684720 | Msa0594620:intron | 15.0% |
| !! | CTATAAAAAAAAAAATTGCA+GGG | - | chr4_2:22684760-22684779 | None:intergenic | 15.0% |
| !! | ACTATAAAAAAAAAAATTGC+AGG | - | chr4_2:22684761-22684780 | None:intergenic | 15.0% |
| !! | AAACTATAAAAAAAATTTGC+AGG | + | chr4_2:22685051-22685070 | Msa0594620:intron | 15.0% |
| !! | AACTATAAAAAAAATTTGCA+GGG | + | chr4_2:22685052-22685071 | Msa0594620:intron | 15.0% |
| !! | AAAACTAAAAAAAAATTTGC+AGG | + | chr4_2:22685110-22685129 | Msa0594620:intron | 15.0% |
| !! | ATATATATTAGGCTAAAATA+TGG | - | chr4_2:22685175-22685194 | None:intergenic | 15.0% |
| !! | TTAGTCATATCATATATATT+AGG | - | chr4_2:22685186-22685205 | None:intergenic | 15.0% |
| !! | AAATCTAAATAATGTATCTT+TGG | - | chr4_2:22685410-22685429 | None:intergenic | 15.0% |
| !!! | TATTTTTTTGTGTGTAAATC+GGG | - | chr4_2:22684066-22684085 | None:intergenic | 20.0% |
| !! | GGCAAAATATTATTAAATAG+GGG | + | chr4_2:22684136-22684155 | Msa0594620:intron | 20.0% |
| !!! | TTTTTTACTAATTTAGACCA+TGG | + | chr4_2:22684499-22684518 | Msa0594620:intron | 20.0% |
| !!! | CTTGCAAAAATTTTTGTTTT+TGG | - | chr4_2:22685025-22685044 | None:intergenic | 20.0% |
| !!! | CAAAAACAAAAATTTTTGCA+AGG | + | chr4_2:22685023-22685042 | Msa0594620:intron | 20.0% |
| !!! | CGTAGTTTTTAACAAAATTA+TGG | + | chr4_2:22685359-22685378 | Msa0594620:intron | 20.0% |
| !!! | AGTTTTTAACAAAATTATGG+TGG | + | chr4_2:22685362-22685381 | Msa0594620:intron | 20.0% |
| !!! | TATTTTTTTGTGTGTAAATC+GGG | - | chr4_2:22684066-22684085 | None:intergenic | 20.0% |
| !! | GGCAAAATATTATTAAATAG+GGG | + | chr4_2:22684136-22684155 | Msa0594620:intron | 20.0% |
| !!! | TTTTTTACTAATTTAGACCA+TGG | + | chr4_2:22684499-22684518 | Msa0594620:intron | 20.0% |
| !!! | CTTGCAAAAATTTTTGTTTT+TGG | - | chr4_2:22685025-22685044 | None:intergenic | 20.0% |
| !!! | CAAAAACAAAAATTTTTGCA+AGG | + | chr4_2:22685023-22685042 | Msa0594620:intron | 20.0% |
| !!! | CGTAGTTTTTAACAAAATTA+TGG | + | chr4_2:22685359-22685378 | Msa0594620:intron | 20.0% |
| !!! | AGTTTTTAACAAAATTATGG+TGG | + | chr4_2:22685362-22685381 | Msa0594620:intron | 20.0% |
| !!! | AGTTTTGAAAAAGCAATACA+AGG | + | chr4_2:22683482-22683501 | Msa0594620:CDS | 25.0% |
| !! | AAACAGATGAAGGTATATTA+GGG | - | chr4_2:22683874-22683893 | None:intergenic | 25.0% |
| !! | TAAACAGATGAAGGTATATT+AGG | - | chr4_2:22683875-22683894 | None:intergenic | 25.0% |
| !!! | TATCCTTTGCTATAAGTTTT+AGG | - | chr4_2:22684172-22684191 | None:intergenic | 25.0% |
| ! | ATATGTGCTATGTTTATTAC+AGG | + | chr4_2:22684263-22684282 | Msa0594620:intron | 25.0% |
| ! | TTTGAGTGTGAAAATGTTAA+TGG | + | chr4_2:22684365-22684384 | Msa0594620:CDS | 25.0% |
| ! | AACTTACTTTGGTATTGTTA+TGG | - | chr4_2:22684468-22684487 | None:intergenic | 25.0% |
| !!! | AGTCTACACAATGTATTTTT+TGG | + | chr4_2:22684543-22684562 | Msa0594620:intron | 25.0% |
| ! | TATAGGCTAAAATATGGTAT+TGG | + | chr4_2:22684583-22684602 | Msa0594620:intron | 25.0% |
| !! | CCAAAACAAAAATTTTTGCA+GGG | - | chr4_2:22684791-22684810 | None:intergenic | 25.0% |
| !! | TCCAAAACAAAAATTTTTGC+AGG | - | chr4_2:22684792-22684811 | None:intergenic | 25.0% |
| ! | TGACAAATCATCACATAATT+GGG | - | chr4_2:22684828-22684847 | None:intergenic | 25.0% |
| ! | ATTAGGCTAAAATATGGTAT+TGG | - | chr4_2:22685169-22685188 | None:intergenic | 25.0% |
| ! | TAATGTATCTTTGGTTAGAT+TGG | - | chr4_2:22685401-22685420 | None:intergenic | 25.0% |
| ! | CAAAATAATCACCCAAAATT+AGG | - | chr4_2:22685496-22685515 | None:intergenic | 25.0% |
| ! | AGTTCAATGAAGACAAAAAA+TGG | + | chr4_2:22685517-22685536 | Msa0594620:intron | 25.0% |
| !!! | AGTTTTGAAAAAGCAATACA+AGG | + | chr4_2:22683482-22683501 | Msa0594620:CDS | 25.0% |
| !! | AAACAGATGAAGGTATATTA+GGG | - | chr4_2:22683874-22683893 | None:intergenic | 25.0% |
| !! | TAAACAGATGAAGGTATATT+AGG | - | chr4_2:22683875-22683894 | None:intergenic | 25.0% |
| !!! | TATCCTTTGCTATAAGTTTT+AGG | - | chr4_2:22684172-22684191 | None:intergenic | 25.0% |
| ! | ATATGTGCTATGTTTATTAC+AGG | + | chr4_2:22684263-22684282 | Msa0594620:intron | 25.0% |
| ! | TTTGAGTGTGAAAATGTTAA+TGG | + | chr4_2:22684365-22684384 | Msa0594620:CDS | 25.0% |
| ! | AACTTACTTTGGTATTGTTA+TGG | - | chr4_2:22684468-22684487 | None:intergenic | 25.0% |
| !!! | AGTCTACACAATGTATTTTT+TGG | + | chr4_2:22684543-22684562 | Msa0594620:intron | 25.0% |
| ! | TATAGGCTAAAATATGGTAT+TGG | + | chr4_2:22684583-22684602 | Msa0594620:intron | 25.0% |
| !! | CCAAAACAAAAATTTTTGCA+GGG | - | chr4_2:22684791-22684810 | None:intergenic | 25.0% |
| !! | TCCAAAACAAAAATTTTTGC+AGG | - | chr4_2:22684792-22684811 | None:intergenic | 25.0% |
| ! | TGACAAATCATCACATAATT+GGG | - | chr4_2:22684828-22684847 | None:intergenic | 25.0% |
| ! | ATTAGGCTAAAATATGGTAT+TGG | - | chr4_2:22685169-22685188 | None:intergenic | 25.0% |
| ! | TAATGTATCTTTGGTTAGAT+TGG | - | chr4_2:22685401-22685420 | None:intergenic | 25.0% |
| ! | CAAAATAATCACCCAAAATT+AGG | - | chr4_2:22685496-22685515 | None:intergenic | 25.0% |
| ! | AGTTCAATGAAGACAAAAAA+TGG | + | chr4_2:22685517-22685536 | Msa0594620:intron | 25.0% |
| CAAAACTACTTGAATCATCA+AGG | - | chr4_2:22683469-22683488 | None:intergenic | 30.0% | |
| ACATGCTTTCAAAATTCCTA+GGG | - | chr4_2:22683597-22683616 | None:intergenic | 30.0% | |
| AACATGCTTTCAAAATTCCT+AGG | - | chr4_2:22683598-22683617 | None:intergenic | 30.0% | |
| ATCAAAGACAGTGAAAAAAG+TGG | + | chr4_2:22683622-22683641 | Msa0594620:CDS | 30.0% | |
| TGTAAAAGTAGTAACCTTGT+TGG | + | chr4_2:22683731-22683750 | Msa0594620:CDS | 30.0% | |
| !!! | GAAAAGAGTGTTTTAGAGTT+TGG | + | chr4_2:22683785-22683804 | Msa0594620:CDS | 30.0% |
| TGGAAAAGTGAATGAATTGA+AGG | + | chr4_2:22683805-22683824 | Msa0594620:CDS | 30.0% | |
| TGAATTGAAGGTTGTTAGTT+TGG | + | chr4_2:22683817-22683836 | Msa0594620:CDS | 30.0% | |
| GGTATATTAGGGCAAATAAA+GGG | - | chr4_2:22683863-22683882 | None:intergenic | 30.0% | |
| AGGTATATTAGGGCAAATAA+AGG | - | chr4_2:22683864-22683883 | None:intergenic | 30.0% | |
| AGTGCTATATAAACAGATGA+AGG | - | chr4_2:22683884-22683903 | None:intergenic | 30.0% | |
| GAAATACATACCAAAGATCA+TGG | - | chr4_2:22683909-22683928 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTACCTAAGGTCCT+AGG | + | chr4_2:22683956-22683975 | Msa0594620:intron | 30.0% |
| GTTCCTAAAACTTATAGCAA+AGG | + | chr4_2:22684166-22684185 | Msa0594620:intron | 30.0% | |
| TGAGATACTTGTATCTATCT+TGG | - | chr4_2:22684292-22684311 | None:intergenic | 30.0% | |
| AGTGTGAAAATGTTAATGGA+AGG | + | chr4_2:22684369-22684388 | Msa0594620:CDS | 30.0% | |
| ATGAAATGATATTCTGTCTG+AGG | - | chr4_2:22684405-22684424 | None:intergenic | 30.0% | |
| CATTGTGTAGACTAATTTGA+TGG | - | chr4_2:22684536-22684555 | None:intergenic | 30.0% | |
| !!! | AAAACTGACCTATTTTTGCA+GGG | - | chr4_2:22685084-22685103 | None:intergenic | 30.0% |
| !! | CCCTGCAAAAATTTTTGTTT+TGG | + | chr4_2:22684788-22684807 | Msa0594620:intron | 30.0% |
| GACAAATCATCACATAATTG+GGG | - | chr4_2:22684827-22684846 | None:intergenic | 30.0% | |
| GTGACAAATCATCACATAAT+TGG | - | chr4_2:22684829-22684848 | None:intergenic | 30.0% | |
| TGACAAATCTTCACATAACT+GGG | + | chr4_2:22684985-22685004 | Msa0594620:intron | 30.0% | |
| !!! | AAAACTGACCTATTTTTGCA+GGG | + | chr4_2:22685084-22685103 | Msa0594620:intron | 30.0% |
| ! | ATCATAGAACGTTTTCAACT+TGG | - | chr4_2:22685257-22685276 | None:intergenic | 30.0% |
| ! | AAAAAAGCCTAGCCTAATTT+TGG | + | chr4_2:22685481-22685500 | Msa0594620:intron | 30.0% |
| ! | AAAAAGCCTAGCCTAATTTT+GGG | + | chr4_2:22685482-22685501 | Msa0594620:intron | 30.0% |
| ATACAATGCTGTAAAGAGAA+GGG | + | chr4_2:22685631-22685650 | Msa0594620:CDS | 30.0% | |
| CAAAACTACTTGAATCATCA+AGG | - | chr4_2:22683469-22683488 | None:intergenic | 30.0% | |
| ACATGCTTTCAAAATTCCTA+GGG | - | chr4_2:22683597-22683616 | None:intergenic | 30.0% | |
| AACATGCTTTCAAAATTCCT+AGG | - | chr4_2:22683598-22683617 | None:intergenic | 30.0% | |
| ATCAAAGACAGTGAAAAAAG+TGG | + | chr4_2:22683622-22683641 | Msa0594620:CDS | 30.0% | |
| TGTAAAAGTAGTAACCTTGT+TGG | + | chr4_2:22683731-22683750 | Msa0594620:CDS | 30.0% | |
| !!! | GAAAAGAGTGTTTTAGAGTT+TGG | + | chr4_2:22683785-22683804 | Msa0594620:CDS | 30.0% |
| TGGAAAAGTGAATGAATTGA+AGG | + | chr4_2:22683805-22683824 | Msa0594620:CDS | 30.0% | |
| TGAATTGAAGGTTGTTAGTT+TGG | + | chr4_2:22683817-22683836 | Msa0594620:CDS | 30.0% | |
| GGTATATTAGGGCAAATAAA+GGG | - | chr4_2:22683863-22683882 | None:intergenic | 30.0% | |
| AGGTATATTAGGGCAAATAA+AGG | - | chr4_2:22683864-22683883 | None:intergenic | 30.0% | |
| AGTGCTATATAAACAGATGA+AGG | - | chr4_2:22683884-22683903 | None:intergenic | 30.0% | |
| GAAATACATACCAAAGATCA+TGG | - | chr4_2:22683909-22683928 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTACCTAAGGTCCT+AGG | + | chr4_2:22683956-22683975 | Msa0594620:intron | 30.0% |
| GTTCCTAAAACTTATAGCAA+AGG | + | chr4_2:22684166-22684185 | Msa0594620:intron | 30.0% | |
| TGAGATACTTGTATCTATCT+TGG | - | chr4_2:22684292-22684311 | None:intergenic | 30.0% | |
| AGTGTGAAAATGTTAATGGA+AGG | + | chr4_2:22684369-22684388 | Msa0594620:CDS | 30.0% | |
| ATGAAATGATATTCTGTCTG+AGG | - | chr4_2:22684405-22684424 | None:intergenic | 30.0% | |
| CATTGTGTAGACTAATTTGA+TGG | - | chr4_2:22684536-22684555 | None:intergenic | 30.0% | |
| !!! | AAAACTGACCTATTTTTGCA+GGG | - | chr4_2:22685084-22685103 | None:intergenic | 30.0% |
| !! | CCCTGCAAAAATTTTTGTTT+TGG | + | chr4_2:22684788-22684807 | Msa0594620:intron | 30.0% |
| GACAAATCATCACATAATTG+GGG | - | chr4_2:22684827-22684846 | None:intergenic | 30.0% | |
| GTGACAAATCATCACATAAT+TGG | - | chr4_2:22684829-22684848 | None:intergenic | 30.0% | |
| TGACAAATCTTCACATAACT+GGG | + | chr4_2:22684985-22685004 | Msa0594620:intron | 30.0% | |
| !!! | AAAACTGACCTATTTTTGCA+GGG | + | chr4_2:22685084-22685103 | Msa0594620:intron | 30.0% |
| ! | ATCATAGAACGTTTTCAACT+TGG | - | chr4_2:22685257-22685276 | None:intergenic | 30.0% |
| ! | AAAAAAGCCTAGCCTAATTT+TGG | + | chr4_2:22685481-22685500 | Msa0594620:intron | 30.0% |
| ! | AAAAAGCCTAGCCTAATTTT+GGG | + | chr4_2:22685482-22685501 | Msa0594620:intron | 30.0% |
| ATACAATGCTGTAAAGAGAA+GGG | + | chr4_2:22685631-22685650 | Msa0594620:CDS | 30.0% | |
| AAAGCAATACAAGGTTGCAT+TGG | + | chr4_2:22683491-22683510 | Msa0594620:CDS | 35.0% | |
| ! | CTTTTTGTCACCTTTTCTTC+TGG | - | chr4_2:22683560-22683579 | None:intergenic | 35.0% |
| CAATGATAAGAACCTTGATG+TGG | + | chr4_2:22683676-22683695 | Msa0594620:CDS | 35.0% | |
| CCAAATAAGAAGATCCAACA+AGG | - | chr4_2:22683748-22683767 | None:intergenic | 35.0% | |
| CCTTGTTGGATCTTCTTATT+TGG | + | chr4_2:22683745-22683764 | Msa0594620:CDS | 35.0% | |
| !! | TGTTAGTTTGGTTCTTCCTT+TGG | + | chr4_2:22683829-22683848 | Msa0594620:CDS | 35.0% |
| !! | ACAAGAGCGTTAAAACTCTT+CGG | + | chr4_2:22684000-22684019 | Msa0594620:intron | 35.0% |
| GAAGAGTTTGTCATCCATTT+GGG | + | chr4_2:22684022-22684041 | Msa0594620:intron | 35.0% | |
| TTGCATTGTCAAAGATATCC+AGG | + | chr4_2:22684437-22684456 | Msa0594620:CDS | 35.0% | |
| TGCATTGTCAAAGATATCCA+GGG | + | chr4_2:22684438-22684457 | Msa0594620:CDS | 35.0% | |
| TGATGGAGTTTACAATTCCA+TGG | - | chr4_2:22684519-22684538 | None:intergenic | 35.0% | |
| !!! | CAAAACTGACCTATTTTTGC+AGG | - | chr4_2:22685083-22685102 | None:intergenic | 35.0% |
| ! | CTGCAAAAATAGGTCAGTTT+TGG | + | chr4_2:22684727-22684746 | Msa0594620:intron | 35.0% |
| !!! | TTGTCACTTTTGTGCATATG+TGG | + | chr4_2:22684842-22684861 | Msa0594620:intron | 35.0% |
| GTGACAAATCTTCACATAAC+TGG | + | chr4_2:22684984-22685003 | Msa0594620:intron | 35.0% | |
| GACAAATCTTCACATAACTG+GGG | + | chr4_2:22684986-22685005 | Msa0594620:intron | 35.0% | |
| ! | CTGCAAAAATAGGTCAGTTT+TGG | - | chr4_2:22684727-22684746 | None:intergenic | 35.0% |
| !!! | CAAAACTGACCTATTTTTGC+AGG | + | chr4_2:22685083-22685102 | Msa0594620:intron | 35.0% |
| ! | GTTTTTGTCCCTGCAAAAAT+AGG | - | chr4_2:22685095-22685114 | None:intergenic | 35.0% |
| TGACTTCGACAAAATCATAG+TGG | + | chr4_2:22685309-22685328 | Msa0594620:intron | 35.0% | |
| TAATCACCCAAAATTAGGCT+AGG | - | chr4_2:22685491-22685510 | None:intergenic | 35.0% | |
| TCTATCATCAAAAAAGCTCC+TGG | + | chr4_2:22685558-22685577 | Msa0594620:CDS | 35.0% | |
| AGCGTCAAAGATATGTATGA+TGG | + | chr4_2:22685604-22685623 | Msa0594620:CDS | 35.0% | |
| CTTCTCTTTACAGCATTGTA+TGG | - | chr4_2:22685632-22685651 | None:intergenic | 35.0% | |
| CATACAATGCTGTAAAGAGA+AGG | + | chr4_2:22685630-22685649 | Msa0594620:CDS | 35.0% | |
| AAAGCAATACAAGGTTGCAT+TGG | + | chr4_2:22683491-22683510 | Msa0594620:CDS | 35.0% | |
| ! | CTTTTTGTCACCTTTTCTTC+TGG | - | chr4_2:22683560-22683579 | None:intergenic | 35.0% |
| CAATGATAAGAACCTTGATG+TGG | + | chr4_2:22683676-22683695 | Msa0594620:CDS | 35.0% | |
| CCAAATAAGAAGATCCAACA+AGG | - | chr4_2:22683748-22683767 | None:intergenic | 35.0% | |
| CCTTGTTGGATCTTCTTATT+TGG | + | chr4_2:22683745-22683764 | Msa0594620:CDS | 35.0% | |
| !! | TGTTAGTTTGGTTCTTCCTT+TGG | + | chr4_2:22683829-22683848 | Msa0594620:CDS | 35.0% |
| !! | ACAAGAGCGTTAAAACTCTT+CGG | + | chr4_2:22684000-22684019 | Msa0594620:intron | 35.0% |
| GAAGAGTTTGTCATCCATTT+GGG | + | chr4_2:22684022-22684041 | Msa0594620:intron | 35.0% | |
| TTGCATTGTCAAAGATATCC+AGG | + | chr4_2:22684437-22684456 | Msa0594620:CDS | 35.0% | |
| TGCATTGTCAAAGATATCCA+GGG | + | chr4_2:22684438-22684457 | Msa0594620:CDS | 35.0% | |
| TGATGGAGTTTACAATTCCA+TGG | - | chr4_2:22684519-22684538 | None:intergenic | 35.0% | |
| !!! | CAAAACTGACCTATTTTTGC+AGG | - | chr4_2:22685083-22685102 | None:intergenic | 35.0% |
| ! | CTGCAAAAATAGGTCAGTTT+TGG | + | chr4_2:22684727-22684746 | Msa0594620:intron | 35.0% |
| !!! | TTGTCACTTTTGTGCATATG+TGG | + | chr4_2:22684842-22684861 | Msa0594620:intron | 35.0% |
| GTGACAAATCTTCACATAAC+TGG | + | chr4_2:22684984-22685003 | Msa0594620:intron | 35.0% | |
| GACAAATCTTCACATAACTG+GGG | + | chr4_2:22684986-22685005 | Msa0594620:intron | 35.0% | |
| ! | CTGCAAAAATAGGTCAGTTT+TGG | - | chr4_2:22684727-22684746 | None:intergenic | 35.0% |
| !!! | CAAAACTGACCTATTTTTGC+AGG | + | chr4_2:22685083-22685102 | Msa0594620:intron | 35.0% |
| ! | GTTTTTGTCCCTGCAAAAAT+AGG | - | chr4_2:22685095-22685114 | None:intergenic | 35.0% |
| TGACTTCGACAAAATCATAG+TGG | + | chr4_2:22685309-22685328 | Msa0594620:intron | 35.0% | |
| TAATCACCCAAAATTAGGCT+AGG | - | chr4_2:22685491-22685510 | None:intergenic | 35.0% | |
| TCTATCATCAAAAAAGCTCC+TGG | + | chr4_2:22685558-22685577 | Msa0594620:CDS | 35.0% | |
| AGCGTCAAAGATATGTATGA+TGG | + | chr4_2:22685604-22685623 | Msa0594620:CDS | 35.0% | |
| CTTCTCTTTACAGCATTGTA+TGG | - | chr4_2:22685632-22685651 | None:intergenic | 35.0% | |
| CATACAATGCTGTAAAGAGA+AGG | + | chr4_2:22685630-22685649 | Msa0594620:CDS | 35.0% | |
| ! | GTTAGCTTCTTTGATGCTTC+TGG | - | chr4_2:22683431-22683450 | None:intergenic | 40.0% |
| TTGAATCATCAAGGTCAGCA+TGG | - | chr4_2:22683460-22683479 | None:intergenic | 40.0% | |
| !!! | CTTGGTTTTGCACATCCATT+GGG | - | chr4_2:22683535-22683554 | None:intergenic | 40.0% |
| !!! | TCTTGGTTTTGCACATCCAT+TGG | - | chr4_2:22683536-22683555 | None:intergenic | 40.0% |
| AAACCAAGAGCCAGAAGAAA+AGG | + | chr4_2:22683547-22683566 | Msa0594620:CDS | 40.0% | |
| AAAGGTGACAAAAAGAGCAG+TGG | + | chr4_2:22683565-22683584 | Msa0594620:CDS | 40.0% | |
| TTACACTTCTAGTGCAGCAA+CGG | + | chr4_2:22683646-22683665 | Msa0594620:CDS | 40.0% | |
| TGATAAGAACCTTGATGTGG+TGG | + | chr4_2:22683679-22683698 | Msa0594620:CDS | 40.0% | |
| !! | ATGTGGTGGATGAAGATGTT+TGG | + | chr4_2:22683693-22683712 | Msa0594620:CDS | 40.0% |
| ! | TTGGTTCTTCCTTTGGTTGT+TGG | + | chr4_2:22683836-22683855 | Msa0594620:CDS | 40.0% |
| ATAAAGGGACCAACAACCAA+AGG | - | chr4_2:22683848-22683867 | None:intergenic | 40.0% | |
| TCAAGACTAGATTCGAACCT+AGG | - | chr4_2:22683976-22683995 | None:intergenic | 40.0% | |
| GGAAGAGTTTGTCATCCATT+TGG | + | chr4_2:22684021-22684040 | Msa0594620:intron | 40.0% | |
| GTATCTCACCAACTCATACA+TGG | + | chr4_2:22684304-22684323 | Msa0594620:CDS | 40.0% | |
| CAGAAATATAAGTGCACGAG+TGG | - | chr4_2:22684345-22684364 | None:intergenic | 40.0% | |
| GGTATTGTTATGGTATACCC+TGG | - | chr4_2:22684458-22684477 | None:intergenic | 40.0% | |
| !! | CAAAACTGGCCTATTTTGCA+GGG | - | chr4_2:22685142-22685161 | None:intergenic | 40.0% |
| !! | TTTTTGGTCCCTGCAAATAC+AGG | + | chr4_2:22684657-22684676 | Msa0594620:intron | 40.0% |
| ! | AAAACTGGCCTGTATTTGCA+GGG | - | chr4_2:22684668-22684687 | None:intergenic | 40.0% |
| !! | GTTTTGGTCCCTGCAAAAAT+AGG | + | chr4_2:22684717-22684736 | Msa0594620:intron | 40.0% |
| TCATCACATAATTGGGGTCA+TGG | - | chr4_2:22684821-22684840 | None:intergenic | 40.0% | |
| GCAGGAACTAAAACCAAAAC+TGG | + | chr4_2:22685128-22685147 | Msa0594620:intron | 40.0% | |
| !! | CAAAACTGGCCTATTTTGCA+GGG | + | chr4_2:22685142-22685161 | Msa0594620:intron | 40.0% |
| TAAATTTGAACCCAGCATCC+AGG | - | chr4_2:22685579-22685598 | None:intergenic | 40.0% | |
| ! | GTTAGCTTCTTTGATGCTTC+TGG | - | chr4_2:22683431-22683450 | None:intergenic | 40.0% |
| TTGAATCATCAAGGTCAGCA+TGG | - | chr4_2:22683460-22683479 | None:intergenic | 40.0% | |
| !!! | CTTGGTTTTGCACATCCATT+GGG | - | chr4_2:22683535-22683554 | None:intergenic | 40.0% |
| !!! | TCTTGGTTTTGCACATCCAT+TGG | - | chr4_2:22683536-22683555 | None:intergenic | 40.0% |
| AAACCAAGAGCCAGAAGAAA+AGG | + | chr4_2:22683547-22683566 | Msa0594620:CDS | 40.0% | |
| AAAGGTGACAAAAAGAGCAG+TGG | + | chr4_2:22683565-22683584 | Msa0594620:CDS | 40.0% | |
| TTACACTTCTAGTGCAGCAA+CGG | + | chr4_2:22683646-22683665 | Msa0594620:CDS | 40.0% | |
| TGATAAGAACCTTGATGTGG+TGG | + | chr4_2:22683679-22683698 | Msa0594620:CDS | 40.0% | |
| !! | ATGTGGTGGATGAAGATGTT+TGG | + | chr4_2:22683693-22683712 | Msa0594620:CDS | 40.0% |
| ! | TTGGTTCTTCCTTTGGTTGT+TGG | + | chr4_2:22683836-22683855 | Msa0594620:CDS | 40.0% |
| ATAAAGGGACCAACAACCAA+AGG | - | chr4_2:22683848-22683867 | None:intergenic | 40.0% | |
| TCAAGACTAGATTCGAACCT+AGG | - | chr4_2:22683976-22683995 | None:intergenic | 40.0% | |
| GGAAGAGTTTGTCATCCATT+TGG | + | chr4_2:22684021-22684040 | Msa0594620:intron | 40.0% | |
| GTATCTCACCAACTCATACA+TGG | + | chr4_2:22684304-22684323 | Msa0594620:CDS | 40.0% | |
| CAGAAATATAAGTGCACGAG+TGG | - | chr4_2:22684345-22684364 | None:intergenic | 40.0% | |
| GGTATTGTTATGGTATACCC+TGG | - | chr4_2:22684458-22684477 | None:intergenic | 40.0% | |
| !! | CAAAACTGGCCTATTTTGCA+GGG | - | chr4_2:22685142-22685161 | None:intergenic | 40.0% |
| !! | TTTTTGGTCCCTGCAAATAC+AGG | + | chr4_2:22684657-22684676 | Msa0594620:intron | 40.0% |
| ! | AAAACTGGCCTGTATTTGCA+GGG | - | chr4_2:22684668-22684687 | None:intergenic | 40.0% |
| !! | GTTTTGGTCCCTGCAAAAAT+AGG | + | chr4_2:22684717-22684736 | Msa0594620:intron | 40.0% |
| TCATCACATAATTGGGGTCA+TGG | - | chr4_2:22684821-22684840 | None:intergenic | 40.0% | |
| GCAGGAACTAAAACCAAAAC+TGG | + | chr4_2:22685128-22685147 | Msa0594620:intron | 40.0% | |
| !! | CAAAACTGGCCTATTTTGCA+GGG | + | chr4_2:22685142-22685161 | Msa0594620:intron | 40.0% |
| TAAATTTGAACCCAGCATCC+AGG | - | chr4_2:22685579-22685598 | None:intergenic | 40.0% | |
| TTTCCATCTAGCACACCCAA+TGG | + | chr4_2:22683517-22683536 | Msa0594620:CDS | 45.0% | |
| !!! | TCACCTTTTCTTCTGGCTCT+TGG | - | chr4_2:22683553-22683572 | None:intergenic | 45.0% |
| GTGACAAAAAGAGCAGTGGA+AGG | + | chr4_2:22683569-22683588 | Msa0594620:CDS | 45.0% | |
| CATCTTCATCCACCACATCA+AGG | - | chr4_2:22683691-22683710 | None:intergenic | 45.0% | |
| ATAGCACTCGCCATGATCTT+TGG | + | chr4_2:22683896-22683915 | Msa0594620:intron | 45.0% | |
| AGATTCGAACCTAGGACCTT+AGG | - | chr4_2:22683968-22683987 | None:intergenic | 45.0% | |
| TGTGTGCACCATGTATGAGT+TGG | - | chr4_2:22684315-22684334 | None:intergenic | 45.0% | |
| !! | GGTATTGGTCCCTGCAAAAT+AGG | + | chr4_2:22684598-22684617 | Msa0594620:intron | 45.0% |
| !! | CCAAAACTGGCCTATTTTGC+AGG | - | chr4_2:22685141-22685160 | None:intergenic | 45.0% |
| ! | CCTGCAAAATAGGCCAGTTT+TGG | + | chr4_2:22684608-22684627 | Msa0594620:intron | 45.0% |
| GCAGGGACTAAAACCAAAAC+TGG | - | chr4_2:22685069-22685088 | None:intergenic | 45.0% | |
| ! | CAAAACTGGCCTGTATTTGC+AGG | - | chr4_2:22684669-22684688 | None:intergenic | 45.0% |
| ! | CTGCAAATACAGGCCAGTTT+TGG | + | chr4_2:22684667-22684686 | Msa0594620:intron | 45.0% |
| GCAGGGACTAAAACCAAAAC+TGG | - | chr4_2:22685069-22685088 | None:intergenic | 45.0% | |
| ! | CCTGCAAAATAGGCCAGTTT+TGG | - | chr4_2:22684608-22684627 | None:intergenic | 45.0% |
| !! | CCAAAACTGGCCTATTTTGC+AGG | + | chr4_2:22685141-22685160 | Msa0594620:intron | 45.0% |
| !! | GGTATTGGTCCCTGCAAAAT+AGG | - | chr4_2:22684598-22684617 | None:intergenic | 45.0% |
| TCAAAAAAGCTCCTGGATGC+TGG | + | chr4_2:22685565-22685584 | Msa0594620:CDS | 45.0% | |
| CAAAAAAGCTCCTGGATGCT+GGG | + | chr4_2:22685566-22685585 | Msa0594620:CDS | 45.0% | |
| TTTCCATCTAGCACACCCAA+TGG | + | chr4_2:22683517-22683536 | Msa0594620:CDS | 45.0% | |
| !!! | TCACCTTTTCTTCTGGCTCT+TGG | - | chr4_2:22683553-22683572 | None:intergenic | 45.0% |
| GTGACAAAAAGAGCAGTGGA+AGG | + | chr4_2:22683569-22683588 | Msa0594620:CDS | 45.0% | |
| CATCTTCATCCACCACATCA+AGG | - | chr4_2:22683691-22683710 | None:intergenic | 45.0% | |
| ATAGCACTCGCCATGATCTT+TGG | + | chr4_2:22683896-22683915 | Msa0594620:intron | 45.0% | |
| AGATTCGAACCTAGGACCTT+AGG | - | chr4_2:22683968-22683987 | None:intergenic | 45.0% | |
| TGTGTGCACCATGTATGAGT+TGG | - | chr4_2:22684315-22684334 | None:intergenic | 45.0% | |
| !! | GGTATTGGTCCCTGCAAAAT+AGG | + | chr4_2:22684598-22684617 | Msa0594620:intron | 45.0% |
| !! | CCAAAACTGGCCTATTTTGC+AGG | - | chr4_2:22685141-22685160 | None:intergenic | 45.0% |
| ! | CCTGCAAAATAGGCCAGTTT+TGG | + | chr4_2:22684608-22684627 | Msa0594620:intron | 45.0% |
| GCAGGGACTAAAACCAAAAC+TGG | - | chr4_2:22685069-22685088 | None:intergenic | 45.0% | |
| ! | CAAAACTGGCCTGTATTTGC+AGG | - | chr4_2:22684669-22684688 | None:intergenic | 45.0% |
| ! | CTGCAAATACAGGCCAGTTT+TGG | + | chr4_2:22684667-22684686 | Msa0594620:intron | 45.0% |
| GCAGGGACTAAAACCAAAAC+TGG | - | chr4_2:22685069-22685088 | None:intergenic | 45.0% | |
| ! | CCTGCAAAATAGGCCAGTTT+TGG | - | chr4_2:22684608-22684627 | None:intergenic | 45.0% |
| !! | CCAAAACTGGCCTATTTTGC+AGG | + | chr4_2:22685141-22685160 | Msa0594620:intron | 45.0% |
| !! | GGTATTGGTCCCTGCAAAAT+AGG | - | chr4_2:22684598-22684617 | None:intergenic | 45.0% |
| TCAAAAAAGCTCCTGGATGC+TGG | + | chr4_2:22685565-22685584 | Msa0594620:CDS | 45.0% | |
| CAAAAAAGCTCCTGGATGCT+GGG | + | chr4_2:22685566-22685585 | Msa0594620:CDS | 45.0% | |
| !!! | ATTATTTCTTTATTTATTAT+AGG | + | chr4_2:22684115-22684134 | Msa0594620:intron | 5.0% |
| !!! | ATTTTTTTTTTTATAGTTTT+TGG | + | chr4_2:22684764-22684783 | Msa0594620:intron | 5.0% |
| !!! | ATTATTTCTTTATTTATTAT+AGG | + | chr4_2:22684115-22684134 | Msa0594620:intron | 5.0% |
| !!! | ATTTTTTTTTTTATAGTTTT+TGG | + | chr4_2:22684764-22684783 | Msa0594620:intron | 5.0% |
| CATCCATTGGGTGTGCTAGA+TGG | - | chr4_2:22683523-22683542 | None:intergenic | 50.0% | |
| CATCCATTGGGTGTGCTAGA+TGG | - | chr4_2:22683523-22683542 | None:intergenic | 50.0% | |
| AGAGCAGTGGAAGGAACCCT+AGG | + | chr4_2:22683578-22683597 | Msa0594620:CDS | 55.0% | |
| !! | ATCCATTTGGGTTGCGCGTG+CGG | + | chr4_2:22684034-22684053 | Msa0594620:intron | 55.0% |
| AGAGCAGTGGAAGGAACCCT+AGG | + | chr4_2:22683578-22683597 | Msa0594620:CDS | 55.0% | |
| !! | ATCCATTTGGGTTGCGCGTG+CGG | + | chr4_2:22684034-22684053 | Msa0594620:intron | 55.0% |
| TTCCGCACGCGCAACCCAAA+TGG | - | chr4_2:22684039-22684058 | None:intergenic | 60.0% | |
| TTCCGCACGCGCAACCCAAA+TGG | - | chr4_2:22684039-22684058 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 22683407 | 22685663 | 22683407 | ID=Msa0594620;Name=Msa0594620 |
| chr4_2 | mRNA | 22683407 | 22685663 | 22683407 | ID=Msa0594620-mRNA-1;Parent=Msa0594620;Name=Msa0594620-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|1|0.66|3|0|263 |
| chr4_2 | exon | 22683407 | 22683857 | 22683407 | ID=Msa0594620-mRNA-1:exon:6137;Parent=Msa0594620-mRNA-1 |
| chr4_2 | exon | 22684285 | 22684480 | 22684285 | ID=Msa0594620-mRNA-1:exon:6138;Parent=Msa0594620-mRNA-1 |
| chr4_2 | exon | 22685519 | 22685663 | 22685519 | ID=Msa0594620-mRNA-1:exon:6139;Parent=Msa0594620-mRNA-1 |
| chr4_2 | CDS | 22683407 | 22683857 | 22683407 | ID=Msa0594620-mRNA-1:cds;Parent=Msa0594620-mRNA-1 |
| chr4_2 | CDS | 22684285 | 22684480 | 22684285 | ID=Msa0594620-mRNA-1:cds;Parent=Msa0594620-mRNA-1 |
| chr4_2 | CDS | 22685519 | 22685663 | 22685519 | ID=Msa0594620-mRNA-1:cds;Parent=Msa0594620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
