Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0594630 | XP_003605087.1 | 87.063 | 286 | 17 | 1 | 1 | 266 | 44 | 329 | 6.01e-176 | 498 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0594630 | sp|Q40316|VESTR_MEDSA | 47.368 | 285 | 130 | 2 | 1 | 266 | 43 | 326 | 2.80e-87 | 265 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0594630 | G7JDF6 | 87.063 | 286 | 17 | 1 | 1 | 266 | 44 | 329 | 2.87e-176 | 498 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa0594630 | 0.842828 | 2.037304e-58 | -8.615850e-47 |
| Msa0013040 | Msa0594630 | 0.817466 | 3.249700e-52 | -8.615850e-47 |
| Msa0027860 | Msa0594630 | 0.800087 | 1.698676e-48 | -8.615850e-47 |
| Msa0033190 | Msa0594630 | -0.802432 | 5.625371e-49 | -8.615850e-47 |
| Msa0040210 | Msa0594630 | 0.803912 | 2.779154e-49 | -8.615850e-47 |
| Msa0062010 | Msa0594630 | 0.820724 | 5.896059e-53 | -8.615850e-47 |
| Msa0063540 | Msa0594630 | 0.815486 | 9.018599e-52 | -8.615850e-47 |
| Msa0079840 | Msa0594630 | -0.801980 | 6.970287e-49 | -8.615850e-47 |
| Msa0095910 | Msa0594630 | 0.811571 | 6.551287e-51 | -8.615850e-47 |
| Msa0096590 | Msa0594630 | 0.804086 | 2.556822e-49 | -8.615850e-47 |
| Msa0108350 | Msa0594630 | 0.821964 | 3.051472e-53 | -8.615850e-47 |
| Msa0141410 | Msa0594630 | 0.805146 | 1.536506e-49 | -8.615850e-47 |
| Msa0150910 | Msa0594630 | 0.816026 | 6.836431e-52 | -8.615850e-47 |
| Msa0150920 | Msa0594630 | 0.836985 | 6.788156e-57 | -8.615850e-47 |
| Msa0152990 | Msa0594630 | 0.800205 | 1.607465e-48 | -8.615850e-47 |
| Msa0163340 | Msa0594630 | 0.806694 | 7.264801e-50 | -8.615850e-47 |
| Msa0190890 | Msa0594630 | 0.802832 | 4.652961e-49 | -8.615850e-47 |
| Msa0207640 | Msa0594630 | 0.803467 | 3.438168e-49 | -8.615850e-47 |
| Msa0209060 | Msa0594630 | 0.840092 | 1.070393e-57 | -8.615850e-47 |
| Msa0220090 | Msa0594630 | 0.820914 | 5.332862e-53 | -8.615850e-47 |
| Msa0222140 | Msa0594630 | 0.804415 | 2.183958e-49 | -8.615850e-47 |
| Msa0232970 | Msa0594630 | 0.833885 | 4.123071e-56 | -8.615850e-47 |
| Msa0233210 | Msa0594630 | 0.801569 | 8.465738e-49 | -8.615850e-47 |
| Msa0366510 | Msa0594630 | 0.846217 | 2.494995e-59 | -8.615850e-47 |
| Msa0369990 | Msa0594630 | 0.813542 | 2.428432e-51 | -8.615850e-47 |
| Msa0374030 | Msa0594630 | 0.816967 | 4.208696e-52 | -8.615850e-47 |
| Msa0374040 | Msa0594630 | 0.816470 | 5.440222e-52 | -8.615850e-47 |
| Msa0391270 | Msa0594630 | 0.807662 | 4.531463e-50 | -8.615850e-47 |
| Msa0414480 | Msa0594630 | 0.834417 | 3.034022e-56 | -8.615850e-47 |
| Msa0454770 | Msa0594630 | 0.802274 | 6.064726e-49 | -8.615850e-47 |
| Msa0464310 | Msa0594630 | 0.823130 | 1.634297e-53 | -8.615850e-47 |
| Msa0242830 | Msa0594630 | 0.830524 | 2.798256e-55 | -8.615850e-47 |
| Msa0261400 | Msa0594630 | 0.815411 | 9.372573e-52 | -8.615850e-47 |
| Msa0264760 | Msa0594630 | 0.801934 | 7.123896e-49 | -8.615850e-47 |
| Msa0272210 | Msa0594630 | 0.820786 | 5.706052e-53 | -8.615850e-47 |
| Msa0274250 | Msa0594630 | 0.814651 | 1.382054e-51 | -8.615850e-47 |
| Msa0278460 | Msa0594630 | 0.802309 | 5.963313e-49 | -8.615850e-47 |
| Msa0281190 | Msa0594630 | 0.847464 | 1.137675e-59 | -8.615850e-47 |
| Msa0287630 | Msa0594630 | 0.812484 | 4.142836e-51 | -8.615850e-47 |
| Msa0288540 | Msa0594630 | 0.840242 | 9.781106e-58 | -8.615850e-47 |
| Msa0299030 | Msa0594630 | 0.812495 | 4.118929e-51 | -8.615850e-47 |
| Msa0307040 | Msa0594630 | 0.801855 | 7.394741e-49 | -8.615850e-47 |
| Msa0314440 | Msa0594630 | 0.800562 | 1.359489e-48 | -8.615850e-47 |
| Msa0326770 | Msa0594630 | 0.848730 | 5.086207e-60 | -8.615850e-47 |
| Msa0328090 | Msa0594630 | 0.816718 | 4.785236e-52 | -8.615850e-47 |
| Msa0348370 | Msa0594630 | 0.817360 | 3.433763e-52 | -8.615850e-47 |
| Msa0491830 | Msa0594630 | 0.811651 | 6.293984e-51 | -8.615850e-47 |
| Msa0506160 | Msa0594630 | 0.808089 | 3.675412e-50 | -8.615850e-47 |
| Msa0515150 | Msa0594630 | 0.801065 | 1.073445e-48 | -8.615850e-47 |
| Msa0523720 | Msa0594630 | 0.800374 | 1.484904e-48 | -8.615850e-47 |
| Msa0535570 | Msa0594630 | 0.830572 | 2.723933e-55 | -8.615850e-47 |
| Msa0536770 | Msa0594630 | 0.925267 | 2.312232e-90 | -8.615850e-47 |
| Msa0538440 | Msa0594630 | 0.813054 | 3.107784e-51 | -8.615850e-47 |
| Msa0538530 | Msa0594630 | 0.800562 | 1.359843e-48 | -8.615850e-47 |
| Msa0554660 | Msa0594630 | 0.815287 | 9.987668e-52 | -8.615850e-47 |
| Msa0579530 | Msa0594630 | 0.806619 | 7.531583e-50 | -8.615850e-47 |
| Msa0580100 | Msa0594630 | 0.802216 | 6.232228e-49 | -8.615850e-47 |
| Msa0591490 | Msa0594630 | 0.850323 | 1.829438e-60 | -8.615850e-47 |
| Msa0593870 | Msa0594630 | 0.833939 | 3.997138e-56 | -8.615850e-47 |
| Msa0594620 | Msa0594630 | 0.876802 | 1.044733e-68 | -8.615850e-47 |
| Msa0594630 | Msa0609460 | 0.801685 | 8.011206e-49 | -8.615850e-47 |
| Msa0594630 | Msa0612220 | 0.811488 | 6.826568e-51 | -8.615850e-47 |
| Msa0594630 | Msa0615070 | 0.802150 | 6.429752e-49 | -8.615850e-47 |
| Msa0594630 | Msa0631700 | 0.814462 | 1.521791e-51 | -8.615850e-47 |
| Msa0594630 | Msa0632980 | 0.942793 | 3.824258e-102 | -8.615850e-47 |
| Msa0594630 | Msa0633940 | 0.829094 | 6.237313e-55 | -8.615850e-47 |
| Msa0594630 | Msa0633970 | 0.830603 | 2.676387e-55 | -8.615850e-47 |
| Msa0594630 | Msa0643190 | 0.805054 | 1.606482e-49 | -8.615850e-47 |
| Msa0594630 | Msa0643840 | 0.817438 | 3.298188e-52 | -8.615850e-47 |
| Msa0594630 | Msa0650100 | 0.803396 | 3.557033e-49 | -8.615850e-47 |
| Msa0594630 | Msa0670360 | 0.820094 | 8.223470e-53 | -8.615850e-47 |
| Msa0594630 | Msa0671640 | 0.873187 | 1.785017e-67 | -8.615850e-47 |
| Msa0594630 | Msa0685080 | 0.817892 | 2.605443e-52 | -8.615850e-47 |
| Msa0594630 | Msa0711260 | 0.802798 | 4.727418e-49 | -8.615850e-47 |
| Msa0594630 | Msa0715220 | 0.837504 | 4.998966e-57 | -8.615850e-47 |
| Msa0594630 | Msa0733560 | 0.806683 | 7.303817e-50 | -8.615850e-47 |
| Msa0594630 | Msa0735140 | 0.839613 | 1.426947e-57 | -8.615850e-47 |
| Msa0594630 | Msa0741360 | 0.812887 | 3.381908e-51 | -8.615850e-47 |
| Msa0594630 | Msa0751960 | 0.803499 | 3.386027e-49 | -8.615850e-47 |
| Msa0594630 | Msa0761950 | 0.800980 | 1.117495e-48 | -8.615850e-47 |
| Msa0594630 | Msa0768670 | 0.810974 | 8.827090e-51 | -8.615850e-47 |
| Msa0594630 | Msa0772160 | -0.801843 | 7.436528e-49 | -8.615850e-47 |
| Msa0594630 | Msa0777060 | 0.822076 | 2.875062e-53 | -8.615850e-47 |
| Msa0594630 | Msa0777070 | 0.848720 | 5.121365e-60 | -8.615850e-47 |
| Msa0594630 | Msa0786940 | 0.809668 | 1.688738e-50 | -8.615850e-47 |
| Msa0594630 | Msa0806930 | 0.815158 | 1.066757e-51 | -8.615850e-47 |
| Msa0594630 | Msa0814160 | 0.871332 | 7.410559e-67 | -8.615850e-47 |
| Msa0594630 | Msa0822410 | 0.818380 | 2.020572e-52 | -8.615850e-47 |
| Msa0594630 | Msa0831890 | 0.817100 | 3.929392e-52 | -8.615850e-47 |
| Msa0594630 | Msa0854840 | 0.846509 | 2.076982e-59 | -8.615850e-47 |
| Msa0594630 | Msa0861730 | 0.840861 | 6.738130e-58 | -8.615850e-47 |
| Msa0594630 | Msa0886800 | 0.822019 | 2.962854e-53 | -8.615850e-47 |
| Msa0594630 | Msa0896920 | 0.825705 | 4.052024e-54 | -8.615850e-47 |
| Msa0594630 | Msa0898830 | -0.801889 | 7.276136e-49 | -8.615850e-47 |
| Msa0594630 | Msa0898970 | 0.823805 | 1.136494e-53 | -8.615850e-47 |
| Msa0594630 | Msa0906680 | 0.806539 | 7.832620e-50 | -8.615850e-47 |
| Msa0594630 | Msa0913550 | 0.818860 | 1.572159e-52 | -8.615850e-47 |
| Msa0594630 | Msa0918140 | 0.808109 | 3.640312e-50 | -8.615850e-47 |
| Msa0594630 | Msa0921180 | 0.829495 | 4.984890e-55 | -8.615850e-47 |
| Msa0594630 | Msa0941120 | 0.815497 | 8.968177e-52 | -8.615850e-47 |
| Msa0594630 | Msa0946010 | 0.855219 | 7.304055e-62 | -8.615850e-47 |
| Msa0594630 | Msa0951150 | 0.816174 | 6.335236e-52 | -8.615850e-47 |
| Msa0594630 | Msa0959700 | 0.826476 | 2.657305e-54 | -8.615850e-47 |
| Msa0594630 | Msa0964510 | 0.820005 | 8.618164e-53 | -8.615850e-47 |
| Msa0594630 | Msa0975950 | 0.807769 | 4.300103e-50 | -8.615850e-47 |
| Msa0594630 | Msa0987640 | 0.832203 | 1.081053e-55 | -8.615850e-47 |
| Msa0594630 | Msa0996980 | 0.812289 | 4.568458e-51 | -8.615850e-47 |
| Msa0594630 | Msa0998780 | 0.825215 | 5.292449e-54 | -8.615850e-47 |
| Msa0594630 | Msa1006030 | 0.816796 | 4.596470e-52 | -8.615850e-47 |
| Msa0594630 | Msa1006170 | 0.825452 | 4.650572e-54 | -8.615850e-47 |
| Msa0594630 | Msa1006220 | 0.806020 | 1.007606e-49 | -8.615850e-47 |
| Msa0594630 | Msa1018590 | 0.849440 | 3.229230e-60 | -8.615850e-47 |
| Msa0594630 | Msa1022490 | 0.823878 | 1.092346e-53 | -8.615850e-47 |
| Msa0594630 | Msa1022510 | 0.836897 | 7.145985e-57 | -8.615850e-47 |
| Msa0594630 | Msa1024350 | 0.821164 | 4.669583e-53 | -8.615850e-47 |
| Msa0594630 | Msa1030320 | 0.806151 | 9.455961e-50 | -8.615850e-47 |
| Msa0594630 | Msa1037530 | 0.804318 | 2.288576e-49 | -8.615850e-47 |
| Msa0594630 | Msa1041910 | 0.803320 | 3.688301e-49 | -8.615850e-47 |
| Msa0594630 | Msa1048350 | 0.842710 | 2.189642e-58 | -8.615850e-47 |
| Msa0594630 | Msa1048400 | 0.835057 | 2.093880e-56 | -8.615850e-47 |
| Msa0594630 | Msa1061670 | 0.822048 | 2.918084e-53 | -8.615850e-47 |
| Msa0594630 | Msa1062060 | 0.805386 | 1.369046e-49 | -8.615850e-47 |
| Msa0594630 | Msa1064940 | 0.818535 | 1.863417e-52 | -8.615850e-47 |
| Msa0594630 | Msa1069010 | 0.809173 | 2.156382e-50 | -8.615850e-47 |
| Msa0594630 | Msa1087370 | 0.809582 | 1.762164e-50 | -8.615850e-47 |
| Msa0594630 | Msa1100030 | 0.810837 | 9.449024e-51 | -8.615850e-47 |
| Msa0594630 | Msa1100310 | 0.820248 | 7.581387e-53 | -8.615850e-47 |
| Msa0594630 | Msa1106680 | 0.842573 | 2.381563e-58 | -8.615850e-47 |
| Msa0594630 | Msa1106960 | 0.812950 | 3.275436e-51 | -8.615850e-47 |
| Msa0594630 | Msa1108560 | 0.819575 | 1.080829e-52 | -8.615850e-47 |
| Msa0594630 | Msa1147030 | 0.824030 | 1.006569e-53 | -8.615850e-47 |
| Msa0594630 | Msa1148200 | 0.807537 | 4.816807e-50 | -8.615850e-47 |
| Msa0594630 | Msa1148210 | 0.835228 | 1.895831e-56 | -8.615850e-47 |
| Msa0594630 | Msa1152300 | 0.801629 | 8.227399e-49 | -8.615850e-47 |
| Msa0594630 | Msa1157210 | 0.800246 | 1.577053e-48 | -8.615850e-47 |
| Msa0594630 | Msa1167960 | 0.818275 | 2.134160e-52 | -8.615850e-47 |
| Msa0594630 | Msa1170340 | 0.817693 | 2.888511e-52 | -8.615850e-47 |
| Msa0594630 | Msa1181090 | 0.839545 | 1.486336e-57 | -8.615850e-47 |
| Msa0594630 | Msa1191640 | 0.802587 | 5.226643e-49 | -8.615850e-47 |
| Msa0594630 | Msa1206330 | 0.801550 | 8.540739e-49 | -8.615850e-47 |
| Msa0594630 | Msa1206380 | 0.801607 | 8.312226e-49 | -8.615850e-47 |
| Msa0594630 | Msa1225850 | 0.810332 | 1.214989e-50 | -8.615850e-47 |
| Msa0594630 | Msa1231720 | 0.847899 | 8.634250e-60 | -8.615850e-47 |
| Msa0594630 | Msa1235330 | 0.804902 | 1.728435e-49 | -8.615850e-47 |
| Msa0594630 | Msa1236680 | 0.823925 | 1.065072e-53 | -8.615850e-47 |
| Msa0594630 | Msa1245530 | 0.812975 | 3.235137e-51 | -8.615850e-47 |
| Msa0594630 | Msa1253750 | 0.812280 | 4.589792e-51 | -8.615850e-47 |
| Msa0594630 | Msa1256730 | 0.805764 | 1.140184e-49 | -8.615850e-47 |
| Msa0594630 | Msa1276580 | 0.817265 | 3.606823e-52 | -8.615850e-47 |
| Msa0594630 | Msa1294020 | 0.837801 | 4.195124e-57 | -8.615850e-47 |
| Msa0594630 | Msa1298090 | 0.802649 | 5.075201e-49 | -8.615850e-47 |
| Msa0594630 | Msa1314800 | 0.816494 | 5.371727e-52 | -8.615850e-47 |
| Msa0594630 | Msa1319010 | 0.852021 | 6.066997e-61 | -8.615850e-47 |
| Msa0594630 | Msa1322500 | 0.803815 | 2.911781e-49 | -8.615850e-47 |
| Msa0594630 | Msa1350870 | 0.810318 | 1.223634e-50 | -8.615850e-47 |
| Msa0594630 | Msa1355340 | 0.828076 | 1.099012e-54 | -8.615850e-47 |
| Msa0594630 | Msa1377980 | -0.803498 | 3.386772e-49 | -8.615850e-47 |
| Msa0594630 | Msa1380740 | 0.811800 | 5.839671e-51 | -8.615850e-47 |
| Msa0594630 | Msa1406840 | 0.837590 | 4.751555e-57 | -8.615850e-47 |
| Msa0594630 | Msa1408280 | -0.803091 | 4.113584e-49 | -8.615850e-47 |
| Msa0594630 | Msa1411550 | 0.826922 | 2.079731e-54 | -8.615850e-47 |
| Msa0594630 | Msa1413150 | 0.806401 | 8.376613e-50 | -8.615850e-47 |
| Msa0594630 | Msa1429470 | 0.805923 | 1.055964e-49 | -8.615850e-47 |
| Msa0594630 | Msa1429550 | 0.835820 | 1.343400e-56 | -8.615850e-47 |
| Msa0594630 | Msa1430350 | 0.825452 | 4.652047e-54 | -8.615850e-47 |
| Msa0594630 | Msa1436400 | 0.817926 | 2.559552e-52 | -8.615850e-47 |
| Msa0594630 | Msa1459610 | 0.814107 | 1.823081e-51 | -8.615850e-47 |
| Msa0594630 | Msa1459680 | -0.802657 | 5.056011e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0594630 | MtrunA17_Chr4g0010991 | 87.063 | 286 | 17 | 1 | 1 | 266 | 44 | 329 | 5.53e-180 | 498 |
| Msa0594630 | MtrunA17_Chr7g0245631 | 47.018 | 285 | 131 | 2 | 1 | 266 | 43 | 326 | 6.05e-88 | 264 |
| Msa0594630 | MtrunA17_Chr7g0245691 | 46.341 | 287 | 131 | 3 | 2 | 266 | 45 | 330 | 6.28e-83 | 251 |
| Msa0594630 | MtrunA17_Chr7g0245741 | 46.503 | 286 | 131 | 3 | 1 | 266 | 43 | 326 | 1.76e-82 | 250 |
| Msa0594630 | MtrunA17_Chr7g0245671 | 44.792 | 288 | 136 | 2 | 1 | 266 | 43 | 329 | 3.54e-80 | 244 |
| Msa0594630 | MtrunA17_Chr7g0245641 | 45.993 | 287 | 133 | 3 | 1 | 266 | 81 | 366 | 1.12e-79 | 244 |
| Msa0594630 | MtrunA17_Chr7g0245711 | 45.804 | 286 | 133 | 3 | 1 | 266 | 5 | 288 | 3.69e-78 | 238 |
| Msa0594630 | MtrunA17_Chr7g0245731 | 45.804 | 286 | 133 | 3 | 1 | 266 | 93 | 376 | 1.02e-76 | 237 |
| Msa0594630 | MtrunA17_Chr1g0155411 | 37.544 | 285 | 156 | 2 | 2 | 266 | 43 | 325 | 5.96e-69 | 216 |
| Msa0594630 | MtrunA17_Chr1g0155431 | 37.193 | 285 | 157 | 2 | 2 | 266 | 43 | 325 | 4.03e-67 | 211 |
| Msa0594630 | MtrunA17_Chr4g0048961 | 31.900 | 279 | 158 | 6 | 16 | 265 | 62 | 337 | 1.59e-42 | 148 |
| Msa0594630 | MtrunA17_Chr4g0042101 | 32.215 | 298 | 161 | 6 | 6 | 266 | 60 | 353 | 6.65e-42 | 147 |
| Msa0594630 | MtrunA17_Chr2g0331211 | 30.345 | 290 | 169 | 7 | 1 | 266 | 39 | 319 | 1.35e-38 | 137 |
| Msa0594630 | MtrunA17_Chr4g0002661 | 33.217 | 286 | 153 | 11 | 6 | 266 | 51 | 323 | 1.29e-32 | 121 |
| Msa0594630 | MtrunA17_Chr2g0281991 | 29.568 | 301 | 169 | 8 | 4 | 266 | 45 | 340 | 5.06e-32 | 120 |
| Msa0594630 | MtrunA17_Chr2g0291541 | 31.271 | 291 | 163 | 14 | 3 | 266 | 46 | 326 | 1.22e-31 | 119 |
| Msa0594630 | MtrunA17_Chr7g0275521 | 29.373 | 303 | 162 | 8 | 7 | 266 | 47 | 340 | 2.43e-30 | 115 |
| Msa0594630 | MtrunA17_Chr5g0423551 | 27.972 | 286 | 176 | 7 | 4 | 266 | 41 | 319 | 6.18e-29 | 111 |
| Msa0594630 | MtrunA17_Chr3g0077231 | 30.736 | 231 | 136 | 4 | 2 | 211 | 41 | 268 | 1.23e-28 | 111 |
| Msa0594630 | MtrunA17_Chr8g0364051 | 31.489 | 235 | 138 | 5 | 2 | 216 | 43 | 274 | 2.25e-27 | 107 |
| Msa0594630 | MtrunA17_Chr3g0106111 | 28.328 | 293 | 161 | 11 | 6 | 266 | 44 | 319 | 6.21e-27 | 106 |
| Msa0594630 | MtrunA17_Chr4g0001321 | 30.526 | 285 | 163 | 10 | 5 | 266 | 54 | 326 | 7.45e-27 | 106 |
| Msa0594630 | MtrunA17_Chr3g0077221 | 30.172 | 232 | 136 | 6 | 2 | 211 | 45 | 272 | 1.13e-26 | 105 |
| Msa0594630 | MtrunA17_Chr2g0282001 | 27.483 | 302 | 170 | 9 | 4 | 264 | 44 | 337 | 1.13e-25 | 103 |
| Msa0594630 | MtrunA17_Chr4g0002961 | 31.119 | 286 | 159 | 9 | 6 | 266 | 51 | 323 | 2.12e-25 | 102 |
| Msa0594630 | MtrunA17_Chr5g0431311 | 29.758 | 289 | 162 | 11 | 6 | 266 | 44 | 319 | 2.26e-25 | 102 |
| Msa0594630 | MtrunA17_Chr2g0333781 | 29.371 | 286 | 165 | 11 | 5 | 266 | 57 | 329 | 3.40e-25 | 102 |
| Msa0594630 | MtrunA17_Chr4g0039321 | 29.851 | 268 | 148 | 11 | 6 | 245 | 48 | 303 | 4.99e-25 | 101 |
| Msa0594630 | MtrunA17_Chr8g0363831 | 27.706 | 231 | 144 | 5 | 6 | 216 | 48 | 275 | 7.70e-25 | 100 |
| Msa0594630 | MtrunA17_Chr2g0282011 | 26.246 | 301 | 175 | 7 | 4 | 264 | 45 | 338 | 7.50e-24 | 98.6 |
| Msa0594630 | MtrunA17_Chr4g0039311 | 29.412 | 238 | 136 | 6 | 6 | 219 | 50 | 279 | 5.33e-22 | 93.2 |
| Msa0594630 | MtrunA17_Chr5g0411071 | 28.866 | 194 | 118 | 8 | 14 | 192 | 55 | 243 | 8.80e-13 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0594630 | AT2G45400.3 | 45.704 | 291 | 131 | 5 | 1 | 266 | 19 | 307 | 9.88e-80 | 243 |
| Msa0594630 | AT2G45400.1 | 45.704 | 291 | 131 | 5 | 1 | 266 | 76 | 364 | 5.64e-79 | 243 |
| Msa0594630 | AT2G45400.2 | 46.667 | 240 | 103 | 4 | 1 | 215 | 76 | 315 | 2.89e-66 | 209 |
| Msa0594630 | AT5G42800.1 | 37.193 | 285 | 157 | 2 | 2 | 266 | 43 | 325 | 2.85e-62 | 201 |
| Msa0594630 | AT2G45400.4 | 55.346 | 159 | 66 | 2 | 1 | 154 | 76 | 234 | 1.24e-52 | 172 |
| Msa0594630 | AT1G61720.1 | 33.333 | 297 | 161 | 7 | 1 | 266 | 47 | 337 | 1.60e-51 | 172 |
| Msa0594630 | AT4G35420.1 | 32.872 | 289 | 162 | 7 | 1 | 266 | 42 | 321 | 1.27e-46 | 159 |
| Msa0594630 | AT2G02400.1 | 29.412 | 289 | 169 | 10 | 3 | 266 | 40 | 318 | 6.51e-33 | 122 |
| Msa0594630 | AT2G33590.1 | 32.721 | 272 | 137 | 9 | 5 | 246 | 46 | 301 | 5.67e-31 | 117 |
| Msa0594630 | AT4G27250.2 | 29.825 | 285 | 161 | 7 | 6 | 257 | 49 | 327 | 3.07e-30 | 116 |
| Msa0594630 | AT4G27250.1 | 29.153 | 295 | 160 | 8 | 6 | 257 | 49 | 337 | 8.47e-30 | 115 |
| Msa0594630 | AT1G68540.1 | 28.276 | 290 | 178 | 8 | 1 | 266 | 38 | 321 | 1.13e-29 | 114 |
| Msa0594630 | AT1G09510.1 | 31.466 | 232 | 135 | 4 | 1 | 211 | 42 | 270 | 3.79e-28 | 110 |
| Msa0594630 | AT5G19440.1 | 29.861 | 288 | 167 | 9 | 2 | 264 | 45 | 322 | 4.02e-28 | 110 |
| Msa0594630 | AT1G51410.1 | 31.034 | 232 | 134 | 5 | 6 | 215 | 48 | 275 | 7.82e-28 | 109 |
| Msa0594630 | AT1G09480.2 | 29.310 | 290 | 172 | 7 | 1 | 266 | 42 | 322 | 8.07e-28 | 109 |
| Msa0594630 | AT1G09480.1 | 29.310 | 290 | 172 | 7 | 1 | 266 | 89 | 369 | 1.67e-27 | 109 |
| Msa0594630 | AT1G25460.1 | 26.621 | 293 | 178 | 7 | 1 | 266 | 37 | 319 | 3.00e-27 | 107 |
| Msa0594630 | AT1G76470.1 | 34.091 | 264 | 146 | 6 | 6 | 246 | 45 | 303 | 6.08e-27 | 107 |
| Msa0594630 | AT1G66800.1 | 30.702 | 228 | 136 | 5 | 2 | 211 | 43 | 266 | 2.17e-26 | 105 |
| Msa0594630 | AT5G58490.1 | 29.966 | 297 | 161 | 11 | 1 | 266 | 43 | 323 | 9.30e-26 | 103 |
| Msa0594630 | AT2G33600.1 | 32.830 | 265 | 146 | 8 | 5 | 246 | 46 | 301 | 1.82e-25 | 102 |
| Msa0594630 | AT1G15950.3 | 30.070 | 286 | 163 | 12 | 5 | 266 | 50 | 322 | 2.34e-25 | 103 |
| Msa0594630 | AT1G15950.1 | 30.070 | 286 | 163 | 12 | 5 | 266 | 50 | 322 | 2.34e-25 | 103 |
| Msa0594630 | AT1G09490.2 | 28.621 | 290 | 174 | 8 | 1 | 266 | 11 | 291 | 3.91e-25 | 101 |
| Msa0594630 | AT1G80820.1 | 29.825 | 285 | 165 | 11 | 5 | 266 | 45 | 317 | 7.19e-25 | 101 |
| Msa0594630 | AT1G09490.1 | 28.621 | 290 | 174 | 8 | 1 | 266 | 42 | 322 | 7.99e-25 | 101 |
| Msa0594630 | AT1G15950.2 | 29.927 | 274 | 156 | 11 | 5 | 254 | 50 | 311 | 2.84e-24 | 100 |
| Msa0594630 | AT1G09500.3 | 29.114 | 237 | 143 | 5 | 1 | 215 | 42 | 275 | 1.13e-22 | 94.7 |
| Msa0594630 | AT1G09500.2 | 29.114 | 237 | 143 | 5 | 1 | 215 | 8 | 241 | 1.85e-22 | 94.4 |
| Msa0594630 | AT1G09500.1 | 29.114 | 237 | 143 | 5 | 1 | 215 | 42 | 275 | 2.75e-22 | 94.4 |
| Msa0594630 | AT1G15950.6 | 30.342 | 234 | 130 | 9 | 5 | 215 | 50 | 273 | 5.38e-21 | 90.1 |
| Msa0594630 | AT1G15950.5 | 30.342 | 234 | 130 | 9 | 5 | 215 | 50 | 273 | 7.59e-21 | 89.7 |
| Msa0594630 | AT1G80820.2 | 30.342 | 234 | 130 | 9 | 5 | 215 | 45 | 268 | 9.05e-21 | 89.4 |
| Msa0594630 | AT1G15950.4 | 30.342 | 234 | 130 | 9 | 5 | 215 | 50 | 273 | 9.13e-21 | 89.7 |
| Msa0594630 | AT1G68540.2 | 27.273 | 220 | 131 | 7 | 70 | 266 | 1 | 214 | 7.46e-17 | 77.4 |
| Msa0594630 | AT1G15950.7 | 28.821 | 229 | 130 | 10 | 62 | 266 | 5 | 224 | 3.04e-15 | 73.6 |
Find 39 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTGTTGGATCTTCTTATT+TGG | 0.209176 | 4_2:+22703902 | Msa0594630:CDS |
| TTTGAGTGTGAAAATGTTAA+TGG | 0.229940 | 4_2:+22704524 | Msa0594630:CDS |
| GTTAGCTTCTTTGATGCTTC+TGG | 0.278137 | 4_2:-22703585 | None:intergenic |
| TATGACTGAAAAGAGTGTTT+TGG | 0.313303 | 4_2:+22703935 | Msa0594630:CDS |
| TTGGTTCTTCCTTTGGTTGT+TGG | 0.320036 | 4_2:+22703993 | Msa0594630:CDS |
| TGTTAGTTTGGTTCTTCCTT+TGG | 0.331534 | 4_2:+22703986 | Msa0594630:CDS |
| AACTTACTTTGGTATTGTTA+TGG | 0.339526 | 4_2:-22704624 | None:intergenic |
| TGAATTGAAGGTTGTTAGTT+TGG | 0.347694 | 4_2:+22703974 | Msa0594630:CDS |
| CTTCTCTTTACAGCATTGTA+TGG | 0.353937 | 4_2:-22705791 | None:intergenic |
| TGTAAAAGTAGTAACCTTGT+TGG | 0.375771 | 4_2:+22703888 | Msa0594630:CDS |
| CATCCATTGGGTGTGCTAGA+TGG | 0.400667 | 4_2:-22703677 | None:intergenic |
| TGAGATACTTGTATCTATCT+TGG | 0.401199 | 4_2:-22704448 | None:intergenic |
| AACATGCTTTCAAAATTCCT+AGG | 0.428586 | 4_2:-22703752 | None:intergenic |
| TTGCTTTGTCAAAGATATCC+AGG | 0.443021 | 4_2:+22704596 | Msa0594630:CDS |
| CAAAACTACTTGAATCATCA+AGG | 0.450303 | 4_2:-22703623 | None:intergenic |
| AAACCAAGAGCCAGAAGAAA+AGG | 0.479277 | 4_2:+22703704 | Msa0594630:CDS |
| TGGAAAAGTGAATGAATTGA+AGG | 0.484535 | 4_2:+22703962 | Msa0594630:CDS |
| ATGTGGTGGATGAAGATGTT+TGG | 0.490382 | 4_2:+22703850 | Msa0594630:CDS |
| AAAGCAATACAAGGTTGCAT+TGG | 0.515168 | 4_2:+22703648 | Msa0594630:CDS |
| TAAATTTGAACCCAGCATCC+AGG | 0.527299 | 4_2:-22705738 | None:intergenic |
| AGCGTCAAAGATATGTATGA+TGG | 0.533471 | 4_2:+22705766 | Msa0594630:CDS |
| ACATGCTTTCAAAATTCCTA+GGG | 0.535454 | 4_2:-22703751 | None:intergenic |
| GGTATTGTTATGGTATACCC+TGG | 0.560996 | 4_2:-22704614 | None:intergenic |
| CAGAAATATAAGTGCACGAG+TGG | 0.561375 | 4_2:-22704501 | None:intergenic |
| CATACAATGCTGTAAAGAGA+AGG | 0.570151 | 4_2:+22705792 | Msa0594630:CDS |
| AGAGCAGTGGAAGGAACCCT+AGG | 0.577037 | 4_2:+22703735 | Msa0594630:CDS |
| TTACACTTCTAGTGCAGCAA+CGG | 0.577130 | 4_2:+22703803 | Msa0594630:CDS |
| GTATCTCACCAACTCATACA+TGG | 0.579056 | 4_2:+22704463 | Msa0594630:CDS |
| TTTCCATCTAGCACACCCAA+TGG | 0.583542 | 4_2:+22703674 | Msa0594630:CDS |
| TTGAATCATCAAGGTCAGCA+TGG | 0.593822 | 4_2:-22703614 | None:intergenic |
| ATAAAGGGACCAACAACCAA+AGG | 0.611130 | 4_2:-22704002 | None:intergenic |
| AGTGTGAAAATGTTAATGGA+AGG | 0.611428 | 4_2:+22704528 | Msa0594630:CDS |
| TGCTTTGTCAAAGATATCCA+GGG | 0.611825 | 4_2:+22704597 | Msa0594630:CDS |
| ATACAATGCTGTAAAGAGAA+GGG | 0.620211 | 4_2:+22705793 | Msa0594630:CDS |
| TGATAAGAATCTTGATGTGG+TGG | 0.620407 | 4_2:+22703836 | Msa0594630:CDS |
| ATGAAATGATATTCTGTCTG+AGG | 0.636261 | 4_2:-22704561 | None:intergenic |
| CCAAATAAGAAGATCCAACA+AGG | 0.649216 | 4_2:-22703902 | None:intergenic |
| TGTGTGCACCATGTATGAGT+TGG | 0.669747 | 4_2:-22704471 | None:intergenic |
| CAATGATAAGAATCTTGATG+TGG | 0.698025 | 4_2:+22703833 | Msa0594630:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATACATTTTTTTTACCTA+AGG | + | chr4_2:22704106-22704125 | Msa0594630:intron | 15.0% |
| !!! | ATATTTTTTTGTGTGTAAAT+CGG | - | chr4_2:22704224-22704243 | None:intergenic | 15.0% |
| !! | TAGGCAAAATATTATTAAAT+AGG | + | chr4_2:22704292-22704311 | Msa0594630:intron | 15.0% |
| !! | AGGCAAAATATTATTAAATA+GGG | + | chr4_2:22704293-22704312 | Msa0594630:intron | 15.0% |
| !! | TATATCTCAAATATTAGAAT+TGG | - | chr4_2:22704366-22704385 | None:intergenic | 15.0% |
| !! | AAAAAATATGAAACTTACTT+TGG | - | chr4_2:22704638-22704657 | None:intergenic | 15.0% |
| !! | CAATGACTTAATTAATATAT+AGG | + | chr4_2:22704725-22704744 | Msa0594630:intron | 15.0% |
| !! | TTAATATATAGGCTAAAATA+TGG | + | chr4_2:22704736-22704755 | Msa0594630:intron | 15.0% |
| !! | AAACTATAAAAAAAATTGCA+GGG | - | chr4_2:22705211-22705230 | None:intergenic | 15.0% |
| !! | AAAACTATAAAAAAAATTGC+AGG | - | chr4_2:22705210-22705229 | None:intergenic | 15.0% |
| !!! | GCAATTTTTTTTATAGTTTT+TGG | + | chr4_2:22704801-22704820 | Msa0594630:intron | 15.0% |
| !! | AAACTATAAAAAAAATTGCA+GGG | - | chr4_2:22705211-22705230 | None:intergenic | 15.0% |
| !! | AAAACTATAAAAAAAATTGC+AGG | - | chr4_2:22705210-22705229 | None:intergenic | 15.0% |
| !!! | GCAATTTTTTTTATAGTTTT+TGG | + | chr4_2:22704801-22704820 | Msa0594630:intron | 15.0% |
| !! | CTATAAAAAAAAAAATTGCA+GGG | - | chr4_2:22704920-22704939 | None:intergenic | 15.0% |
| !! | ACTATAAAAAAAAAAATTGC+AGG | - | chr4_2:22704921-22704940 | None:intergenic | 15.0% |
| !!! | GCAATTTTTTTTATAGTTTT+TGG | - | chr4_2:22704801-22704820 | None:intergenic | 15.0% |
| !! | AAAACTATAAAAAAAATTGC+AGG | + | chr4_2:22705210-22705229 | Msa0594630:intron | 15.0% |
| !! | AAACTATAAAAAAAATTGCA+GGG | + | chr4_2:22705211-22705230 | Msa0594630:intron | 15.0% |
| !!! | GCAAATTTTTTTTTAGTTTT+TGG | - | chr4_2:22705270-22705289 | None:intergenic | 15.0% |
| !! | AAAACTAAAAAAAAATTTGC+AGG | + | chr4_2:22705270-22705289 | Msa0594630:intron | 15.0% |
| !! | AAACTAAAAAAAAATTTGCA+GGG | + | chr4_2:22705271-22705290 | Msa0594630:intron | 15.0% |
| !! | ATATATATTAGGCTAAAATA+TGG | - | chr4_2:22705335-22705354 | None:intergenic | 15.0% |
| !! | TTAGTCATATCATATATATT+AGG | - | chr4_2:22705346-22705365 | None:intergenic | 15.0% |
| !! | AAATCTAAATAATGTATCTT+TGG | - | chr4_2:22705571-22705590 | None:intergenic | 15.0% |
| !!! | ATATACATTTTTTTTACCTA+AGG | + | chr4_2:22704106-22704125 | Msa0594630:intron | 15.0% |
| !!! | ATATTTTTTTGTGTGTAAAT+CGG | - | chr4_2:22704224-22704243 | None:intergenic | 15.0% |
| !! | TAGGCAAAATATTATTAAAT+AGG | + | chr4_2:22704292-22704311 | Msa0594630:intron | 15.0% |
| !! | AGGCAAAATATTATTAAATA+GGG | + | chr4_2:22704293-22704312 | Msa0594630:intron | 15.0% |
| !! | TATATCTCAAATATTAGAAT+TGG | - | chr4_2:22704366-22704385 | None:intergenic | 15.0% |
| !! | AAAAAATATGAAACTTACTT+TGG | - | chr4_2:22704638-22704657 | None:intergenic | 15.0% |
| !! | CAATGACTTAATTAATATAT+AGG | + | chr4_2:22704725-22704744 | Msa0594630:intron | 15.0% |
| !! | TTAATATATAGGCTAAAATA+TGG | + | chr4_2:22704736-22704755 | Msa0594630:intron | 15.0% |
| !! | AAACTATAAAAAAAATTGCA+GGG | - | chr4_2:22705211-22705230 | None:intergenic | 15.0% |
| !! | AAAACTATAAAAAAAATTGC+AGG | - | chr4_2:22705210-22705229 | None:intergenic | 15.0% |
| !!! | GCAATTTTTTTTATAGTTTT+TGG | + | chr4_2:22704801-22704820 | Msa0594630:intron | 15.0% |
| !! | AAACTATAAAAAAAATTGCA+GGG | - | chr4_2:22705211-22705230 | None:intergenic | 15.0% |
| !! | AAAACTATAAAAAAAATTGC+AGG | - | chr4_2:22705210-22705229 | None:intergenic | 15.0% |
| !!! | GCAATTTTTTTTATAGTTTT+TGG | + | chr4_2:22704801-22704820 | Msa0594630:intron | 15.0% |
| !! | CTATAAAAAAAAAAATTGCA+GGG | - | chr4_2:22704920-22704939 | None:intergenic | 15.0% |
| !! | ACTATAAAAAAAAAAATTGC+AGG | - | chr4_2:22704921-22704940 | None:intergenic | 15.0% |
| !!! | GCAATTTTTTTTATAGTTTT+TGG | - | chr4_2:22704801-22704820 | None:intergenic | 15.0% |
| !! | AAAACTATAAAAAAAATTGC+AGG | + | chr4_2:22705210-22705229 | Msa0594630:intron | 15.0% |
| !! | AAACTATAAAAAAAATTGCA+GGG | + | chr4_2:22705211-22705230 | Msa0594630:intron | 15.0% |
| !!! | GCAAATTTTTTTTTAGTTTT+TGG | - | chr4_2:22705270-22705289 | None:intergenic | 15.0% |
| !! | AAAACTAAAAAAAAATTTGC+AGG | + | chr4_2:22705270-22705289 | Msa0594630:intron | 15.0% |
| !! | AAACTAAAAAAAAATTTGCA+GGG | + | chr4_2:22705271-22705290 | Msa0594630:intron | 15.0% |
| !! | ATATATATTAGGCTAAAATA+TGG | - | chr4_2:22705335-22705354 | None:intergenic | 15.0% |
| !! | TTAGTCATATCATATATATT+AGG | - | chr4_2:22705346-22705365 | None:intergenic | 15.0% |
| !! | AAATCTAAATAATGTATCTT+TGG | - | chr4_2:22705571-22705590 | None:intergenic | 15.0% |
| !!! | TATTTTTTTGTGTGTAAATC+GGG | - | chr4_2:22704223-22704242 | None:intergenic | 20.0% |
| !! | GGCAAAATATTATTAAATAG+GGG | + | chr4_2:22704294-22704313 | Msa0594630:intron | 20.0% |
| !!! | TTTTTTACTAATTTAGACCA+TGG | + | chr4_2:22704658-22704677 | Msa0594630:intron | 20.0% |
| !!! | CAAAAACAAAAATTTTTGCA+GGG | + | chr4_2:22705183-22705202 | Msa0594630:intron | 20.0% |
| !!! | CGTAGTTTTTAACAAAATTA+TGG | + | chr4_2:22705519-22705538 | Msa0594630:intron | 20.0% |
| !!! | AGTTTTTAACAAAATTATGG+TGG | + | chr4_2:22705522-22705541 | Msa0594630:intron | 20.0% |
| !! | AAAATAATCACCCAAAAATT+AGG | - | chr4_2:22705657-22705676 | None:intergenic | 20.0% |
| !!! | TATTTTTTTGTGTGTAAATC+GGG | - | chr4_2:22704223-22704242 | None:intergenic | 20.0% |
| !! | GGCAAAATATTATTAAATAG+GGG | + | chr4_2:22704294-22704313 | Msa0594630:intron | 20.0% |
| !!! | TTTTTTACTAATTTAGACCA+TGG | + | chr4_2:22704658-22704677 | Msa0594630:intron | 20.0% |
| !!! | CAAAAACAAAAATTTTTGCA+GGG | + | chr4_2:22705183-22705202 | Msa0594630:intron | 20.0% |
| !!! | CGTAGTTTTTAACAAAATTA+TGG | + | chr4_2:22705519-22705538 | Msa0594630:intron | 20.0% |
| !!! | AGTTTTTAACAAAATTATGG+TGG | + | chr4_2:22705522-22705541 | Msa0594630:intron | 20.0% |
| !! | AAAATAATCACCCAAAAATT+AGG | - | chr4_2:22705657-22705676 | None:intergenic | 20.0% |
| !!! | AGTTTTGAAAAAGCAATACA+AGG | + | chr4_2:22703639-22703658 | Msa0594630:CDS | 25.0% |
| !! | AAACAGATGAAGGTATATTA+GGG | - | chr4_2:22704031-22704050 | None:intergenic | 25.0% |
| !! | TAAACAGATGAAGGTATATT+AGG | - | chr4_2:22704032-22704051 | None:intergenic | 25.0% |
| !!! | TATCCTTTGCTATAAGTTTT+AGG | - | chr4_2:22704330-22704349 | None:intergenic | 25.0% |
| ! | ATATGTGCTATGTTTATTAC+AGG | + | chr4_2:22704422-22704441 | Msa0594630:intron | 25.0% |
| ! | TTTGAGTGTGAAAATGTTAA+TGG | + | chr4_2:22704524-22704543 | Msa0594630:CDS | 25.0% |
| ! | AACTTACTTTGGTATTGTTA+TGG | - | chr4_2:22704627-22704646 | None:intergenic | 25.0% |
| !!! | AGTCTACACAATGTATTTTT+TGG | + | chr4_2:22704702-22704721 | Msa0594630:intron | 25.0% |
| ! | TATAGGCTAAAATATGGTAT+TGG | + | chr4_2:22704742-22704761 | Msa0594630:intron | 25.0% |
| !! | CCAAAAACAAAATTTTTGCA+GGG | - | chr4_2:22704951-22704970 | None:intergenic | 25.0% |
| !! | TCCAAAAACAAAATTTTTGC+AGG | - | chr4_2:22704952-22704971 | None:intergenic | 25.0% |
| ! | TGACAAATCATCACATAATT+GGG | - | chr4_2:22704988-22705007 | None:intergenic | 25.0% |
| !!! | CCTGCAAAAATTTTTGTTTT+TGG | - | chr4_2:22705185-22705204 | None:intergenic | 25.0% |
| !! | CCAAAAACAAAAATTTTTGC+AGG | + | chr4_2:22705182-22705201 | Msa0594630:intron | 25.0% |
| ! | ATTAGGCTAAAATATGGTAT+TGG | - | chr4_2:22705329-22705348 | None:intergenic | 25.0% |
| ! | TAATGTATCTTTGGTTAGAT+TGG | - | chr4_2:22705562-22705581 | None:intergenic | 25.0% |
| ! | AGTTCAATGAAGACAAAAAA+TGG | + | chr4_2:22705679-22705698 | Msa0594630:intron | 25.0% |
| !!! | AGTTTTGAAAAAGCAATACA+AGG | + | chr4_2:22703639-22703658 | Msa0594630:CDS | 25.0% |
| !! | AAACAGATGAAGGTATATTA+GGG | - | chr4_2:22704031-22704050 | None:intergenic | 25.0% |
| !! | TAAACAGATGAAGGTATATT+AGG | - | chr4_2:22704032-22704051 | None:intergenic | 25.0% |
| !!! | TATCCTTTGCTATAAGTTTT+AGG | - | chr4_2:22704330-22704349 | None:intergenic | 25.0% |
| ! | ATATGTGCTATGTTTATTAC+AGG | + | chr4_2:22704422-22704441 | Msa0594630:intron | 25.0% |
| ! | TTTGAGTGTGAAAATGTTAA+TGG | + | chr4_2:22704524-22704543 | Msa0594630:CDS | 25.0% |
| ! | AACTTACTTTGGTATTGTTA+TGG | - | chr4_2:22704627-22704646 | None:intergenic | 25.0% |
| !!! | AGTCTACACAATGTATTTTT+TGG | + | chr4_2:22704702-22704721 | Msa0594630:intron | 25.0% |
| ! | TATAGGCTAAAATATGGTAT+TGG | + | chr4_2:22704742-22704761 | Msa0594630:intron | 25.0% |
| !! | CCAAAAACAAAATTTTTGCA+GGG | - | chr4_2:22704951-22704970 | None:intergenic | 25.0% |
| !! | TCCAAAAACAAAATTTTTGC+AGG | - | chr4_2:22704952-22704971 | None:intergenic | 25.0% |
| ! | TGACAAATCATCACATAATT+GGG | - | chr4_2:22704988-22705007 | None:intergenic | 25.0% |
| !!! | CCTGCAAAAATTTTTGTTTT+TGG | - | chr4_2:22705185-22705204 | None:intergenic | 25.0% |
| !! | CCAAAAACAAAAATTTTTGC+AGG | + | chr4_2:22705182-22705201 | Msa0594630:intron | 25.0% |
| ! | ATTAGGCTAAAATATGGTAT+TGG | - | chr4_2:22705329-22705348 | None:intergenic | 25.0% |
| ! | TAATGTATCTTTGGTTAGAT+TGG | - | chr4_2:22705562-22705581 | None:intergenic | 25.0% |
| ! | AGTTCAATGAAGACAAAAAA+TGG | + | chr4_2:22705679-22705698 | Msa0594630:intron | 25.0% |
| CAAAACTACTTGAATCATCA+AGG | - | chr4_2:22703626-22703645 | None:intergenic | 30.0% | |
| ACATGCTTTCAAAATTCCTA+GGG | - | chr4_2:22703754-22703773 | None:intergenic | 30.0% | |
| AACATGCTTTCAAAATTCCT+AGG | - | chr4_2:22703755-22703774 | None:intergenic | 30.0% | |
| !! | AGGAATTTTGAAAGCATGTT+TGG | + | chr4_2:22703755-22703774 | Msa0594630:CDS | 30.0% |
| ATCAAAGACAGTGAAAAAAG+TGG | + | chr4_2:22703779-22703798 | Msa0594630:CDS | 30.0% | |
| CAATGATAAGAATCTTGATG+TGG | + | chr4_2:22703833-22703852 | Msa0594630:CDS | 30.0% | |
| TGTAAAAGTAGTAACCTTGT+TGG | + | chr4_2:22703888-22703907 | Msa0594630:CDS | 30.0% | |
| !!! | TATGACTGAAAAGAGTGTTT+TGG | + | chr4_2:22703935-22703954 | Msa0594630:CDS | 30.0% |
| TGGAAAAGTGAATGAATTGA+AGG | + | chr4_2:22703962-22703981 | Msa0594630:CDS | 30.0% | |
| TGAATTGAAGGTTGTTAGTT+TGG | + | chr4_2:22703974-22703993 | Msa0594630:CDS | 30.0% | |
| GGTATATTAGGGCAAATAAA+GGG | - | chr4_2:22704020-22704039 | None:intergenic | 30.0% | |
| AGGTATATTAGGGCAAATAA+AGG | - | chr4_2:22704021-22704040 | None:intergenic | 30.0% | |
| AGTGCTATATAAACAGATGA+AGG | - | chr4_2:22704041-22704060 | None:intergenic | 30.0% | |
| GAAATACATACCAAAGATCA+TGG | - | chr4_2:22704066-22704085 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTACCTAAGGTCCT+AGG | + | chr4_2:22704113-22704132 | Msa0594630:intron | 30.0% |
| GTTCCTAAAACTTATAGCAA+AGG | + | chr4_2:22704324-22704343 | Msa0594630:intron | 30.0% | |
| TGAGATACTTGTATCTATCT+TGG | - | chr4_2:22704451-22704470 | None:intergenic | 30.0% | |
| AGTGTGAAAATGTTAATGGA+AGG | + | chr4_2:22704528-22704547 | Msa0594630:CDS | 30.0% | |
| ATGAAATGATATTCTGTCTG+AGG | - | chr4_2:22704564-22704583 | None:intergenic | 30.0% | |
| CATTGTGTAGACTAATTTGA+CGG | - | chr4_2:22704695-22704714 | None:intergenic | 30.0% | |
| !!! | AAAACTGACCTATTTTTGCA+GGG | - | chr4_2:22705243-22705262 | None:intergenic | 30.0% |
| !!! | CCCTGCAAAAATTTTGTTTT+TGG | + | chr4_2:22704948-22704967 | Msa0594630:intron | 30.0% |
| GACAAATCATCACATAATTG+GGG | - | chr4_2:22704987-22705006 | None:intergenic | 30.0% | |
| GTGACAAATCATCACATAAT+TGG | - | chr4_2:22704989-22705008 | None:intergenic | 30.0% | |
| TGACAAATCATCACATAACT+GGG | + | chr4_2:22705145-22705164 | Msa0594630:intron | 30.0% | |
| !!! | AAAACTGACCTATTTTTGCA+GGG | + | chr4_2:22705243-22705262 | Msa0594630:intron | 30.0% |
| ! | ATCATAGAACGTTTTCAACT+TGG | - | chr4_2:22705417-22705436 | None:intergenic | 30.0% |
| ! | AAAAAGCCTAGCCTAATTTT+TGG | + | chr4_2:22705643-22705662 | Msa0594630:intron | 30.0% |
| ! | AAAAGCCTAGCCTAATTTTT+GGG | + | chr4_2:22705644-22705663 | Msa0594630:intron | 30.0% |
| ATACAATGCTGTAAAGAGAA+GGG | + | chr4_2:22705793-22705812 | Msa0594630:CDS | 30.0% | |
| CAAAACTACTTGAATCATCA+AGG | - | chr4_2:22703626-22703645 | None:intergenic | 30.0% | |
| ACATGCTTTCAAAATTCCTA+GGG | - | chr4_2:22703754-22703773 | None:intergenic | 30.0% | |
| AACATGCTTTCAAAATTCCT+AGG | - | chr4_2:22703755-22703774 | None:intergenic | 30.0% | |
| !! | AGGAATTTTGAAAGCATGTT+TGG | + | chr4_2:22703755-22703774 | Msa0594630:CDS | 30.0% |
| ATCAAAGACAGTGAAAAAAG+TGG | + | chr4_2:22703779-22703798 | Msa0594630:CDS | 30.0% | |
| CAATGATAAGAATCTTGATG+TGG | + | chr4_2:22703833-22703852 | Msa0594630:CDS | 30.0% | |
| TGTAAAAGTAGTAACCTTGT+TGG | + | chr4_2:22703888-22703907 | Msa0594630:CDS | 30.0% | |
| !!! | TATGACTGAAAAGAGTGTTT+TGG | + | chr4_2:22703935-22703954 | Msa0594630:CDS | 30.0% |
| TGGAAAAGTGAATGAATTGA+AGG | + | chr4_2:22703962-22703981 | Msa0594630:CDS | 30.0% | |
| TGAATTGAAGGTTGTTAGTT+TGG | + | chr4_2:22703974-22703993 | Msa0594630:CDS | 30.0% | |
| GGTATATTAGGGCAAATAAA+GGG | - | chr4_2:22704020-22704039 | None:intergenic | 30.0% | |
| AGGTATATTAGGGCAAATAA+AGG | - | chr4_2:22704021-22704040 | None:intergenic | 30.0% | |
| AGTGCTATATAAACAGATGA+AGG | - | chr4_2:22704041-22704060 | None:intergenic | 30.0% | |
| GAAATACATACCAAAGATCA+TGG | - | chr4_2:22704066-22704085 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTACCTAAGGTCCT+AGG | + | chr4_2:22704113-22704132 | Msa0594630:intron | 30.0% |
| GTTCCTAAAACTTATAGCAA+AGG | + | chr4_2:22704324-22704343 | Msa0594630:intron | 30.0% | |
| TGAGATACTTGTATCTATCT+TGG | - | chr4_2:22704451-22704470 | None:intergenic | 30.0% | |
| AGTGTGAAAATGTTAATGGA+AGG | + | chr4_2:22704528-22704547 | Msa0594630:CDS | 30.0% | |
| ATGAAATGATATTCTGTCTG+AGG | - | chr4_2:22704564-22704583 | None:intergenic | 30.0% | |
| CATTGTGTAGACTAATTTGA+CGG | - | chr4_2:22704695-22704714 | None:intergenic | 30.0% | |
| !!! | AAAACTGACCTATTTTTGCA+GGG | - | chr4_2:22705243-22705262 | None:intergenic | 30.0% |
| !!! | CCCTGCAAAAATTTTGTTTT+TGG | + | chr4_2:22704948-22704967 | Msa0594630:intron | 30.0% |
| GACAAATCATCACATAATTG+GGG | - | chr4_2:22704987-22705006 | None:intergenic | 30.0% | |
| GTGACAAATCATCACATAAT+TGG | - | chr4_2:22704989-22705008 | None:intergenic | 30.0% | |
| TGACAAATCATCACATAACT+GGG | + | chr4_2:22705145-22705164 | Msa0594630:intron | 30.0% | |
| !!! | AAAACTGACCTATTTTTGCA+GGG | + | chr4_2:22705243-22705262 | Msa0594630:intron | 30.0% |
| ! | ATCATAGAACGTTTTCAACT+TGG | - | chr4_2:22705417-22705436 | None:intergenic | 30.0% |
| ! | AAAAAGCCTAGCCTAATTTT+TGG | + | chr4_2:22705643-22705662 | Msa0594630:intron | 30.0% |
| ! | AAAAGCCTAGCCTAATTTTT+GGG | + | chr4_2:22705644-22705663 | Msa0594630:intron | 30.0% |
| ATACAATGCTGTAAAGAGAA+GGG | + | chr4_2:22705793-22705812 | Msa0594630:CDS | 30.0% | |
| AAAGCAATACAAGGTTGCAT+TGG | + | chr4_2:22703648-22703667 | Msa0594630:CDS | 35.0% | |
| ! | CTTTTTGTCACCTTTTCTTC+TGG | - | chr4_2:22703717-22703736 | None:intergenic | 35.0% |
| TGATAAGAATCTTGATGTGG+TGG | + | chr4_2:22703836-22703855 | Msa0594630:CDS | 35.0% | |
| CCAAATAAGAAGATCCAACA+AGG | - | chr4_2:22703905-22703924 | None:intergenic | 35.0% | |
| CCTTGTTGGATCTTCTTATT+TGG | + | chr4_2:22703902-22703921 | Msa0594630:CDS | 35.0% | |
| !!! | GAAAAGAGTGTTTTGGAGTT+TGG | + | chr4_2:22703942-22703961 | Msa0594630:CDS | 35.0% |
| !! | TGTTAGTTTGGTTCTTCCTT+TGG | + | chr4_2:22703986-22704005 | Msa0594630:CDS | 35.0% |
| !! | ACAAGAGCGTTAAAACTCTT+CGG | + | chr4_2:22704157-22704176 | Msa0594630:intron | 35.0% |
| GAAGAGTTTGTCATCCATTT+GGG | + | chr4_2:22704179-22704198 | Msa0594630:intron | 35.0% | |
| TTGCTTTGTCAAAGATATCC+AGG | + | chr4_2:22704596-22704615 | Msa0594630:CDS | 35.0% | |
| TGCTTTGTCAAAGATATCCA+GGG | + | chr4_2:22704597-22704616 | Msa0594630:CDS | 35.0% | |
| ! | CAAAACTGTCCTATTTTGCA+GGG | - | chr4_2:22704769-22704788 | None:intergenic | 35.0% |
| !! | TTTTTGGTCCCTGCAAAAAT+AGG | + | chr4_2:22704877-22704896 | Msa0594630:intron | 35.0% |
| !!! | CAAAACTGACCTATTTTTGC+AGG | - | chr4_2:22705242-22705261 | None:intergenic | 35.0% |
| ! | CTGCAAAAATAGGTCAGTTT+TGG | + | chr4_2:22704887-22704906 | Msa0594630:intron | 35.0% |
| !!! | TTGTCACTTTTGTGCATATG+TGG | + | chr4_2:22705002-22705021 | Msa0594630:intron | 35.0% |
| GTGACAAATCATCACATAAC+TGG | + | chr4_2:22705144-22705163 | Msa0594630:intron | 35.0% | |
| GACAAATCATCACATAACTG+GGG | + | chr4_2:22705146-22705165 | Msa0594630:intron | 35.0% | |
| ! | CTGCAAAAATAGGTCAGTTT+TGG | - | chr4_2:22704887-22704906 | None:intergenic | 35.0% |
| !!! | CAAAACTGACCTATTTTTGC+AGG | + | chr4_2:22705242-22705261 | Msa0594630:intron | 35.0% |
| !! | TTTTTGGTCCCTGCAAAAAT+AGG | - | chr4_2:22704877-22704896 | None:intergenic | 35.0% |
| TGACTTCGACAAAATCATAG+TGG | + | chr4_2:22705469-22705488 | Msa0594630:intron | 35.0% | |
| AATCACCCAAAAATTAGGCT+AGG | - | chr4_2:22705652-22705671 | None:intergenic | 35.0% | |
| TCTATCATCAAAAAAGCTCC+TGG | + | chr4_2:22705720-22705739 | Msa0594630:CDS | 35.0% | |
| AGCGTCAAAGATATGTATGA+TGG | + | chr4_2:22705766-22705785 | Msa0594630:CDS | 35.0% | |
| CTTCTCTTTACAGCATTGTA+TGG | - | chr4_2:22705794-22705813 | None:intergenic | 35.0% | |
| CATACAATGCTGTAAAGAGA+AGG | + | chr4_2:22705792-22705811 | Msa0594630:CDS | 35.0% | |
| AAAGCAATACAAGGTTGCAT+TGG | + | chr4_2:22703648-22703667 | Msa0594630:CDS | 35.0% | |
| ! | CTTTTTGTCACCTTTTCTTC+TGG | - | chr4_2:22703717-22703736 | None:intergenic | 35.0% |
| TGATAAGAATCTTGATGTGG+TGG | + | chr4_2:22703836-22703855 | Msa0594630:CDS | 35.0% | |
| CCAAATAAGAAGATCCAACA+AGG | - | chr4_2:22703905-22703924 | None:intergenic | 35.0% | |
| CCTTGTTGGATCTTCTTATT+TGG | + | chr4_2:22703902-22703921 | Msa0594630:CDS | 35.0% | |
| !!! | GAAAAGAGTGTTTTGGAGTT+TGG | + | chr4_2:22703942-22703961 | Msa0594630:CDS | 35.0% |
| !! | TGTTAGTTTGGTTCTTCCTT+TGG | + | chr4_2:22703986-22704005 | Msa0594630:CDS | 35.0% |
| !! | ACAAGAGCGTTAAAACTCTT+CGG | + | chr4_2:22704157-22704176 | Msa0594630:intron | 35.0% |
| GAAGAGTTTGTCATCCATTT+GGG | + | chr4_2:22704179-22704198 | Msa0594630:intron | 35.0% | |
| TTGCTTTGTCAAAGATATCC+AGG | + | chr4_2:22704596-22704615 | Msa0594630:CDS | 35.0% | |
| TGCTTTGTCAAAGATATCCA+GGG | + | chr4_2:22704597-22704616 | Msa0594630:CDS | 35.0% | |
| ! | CAAAACTGTCCTATTTTGCA+GGG | - | chr4_2:22704769-22704788 | None:intergenic | 35.0% |
| !! | TTTTTGGTCCCTGCAAAAAT+AGG | + | chr4_2:22704877-22704896 | Msa0594630:intron | 35.0% |
| !!! | CAAAACTGACCTATTTTTGC+AGG | - | chr4_2:22705242-22705261 | None:intergenic | 35.0% |
| ! | CTGCAAAAATAGGTCAGTTT+TGG | + | chr4_2:22704887-22704906 | Msa0594630:intron | 35.0% |
| !!! | TTGTCACTTTTGTGCATATG+TGG | + | chr4_2:22705002-22705021 | Msa0594630:intron | 35.0% |
| GTGACAAATCATCACATAAC+TGG | + | chr4_2:22705144-22705163 | Msa0594630:intron | 35.0% | |
| GACAAATCATCACATAACTG+GGG | + | chr4_2:22705146-22705165 | Msa0594630:intron | 35.0% | |
| ! | CTGCAAAAATAGGTCAGTTT+TGG | - | chr4_2:22704887-22704906 | None:intergenic | 35.0% |
| !!! | CAAAACTGACCTATTTTTGC+AGG | + | chr4_2:22705242-22705261 | Msa0594630:intron | 35.0% |
| !! | TTTTTGGTCCCTGCAAAAAT+AGG | - | chr4_2:22704877-22704896 | None:intergenic | 35.0% |
| TGACTTCGACAAAATCATAG+TGG | + | chr4_2:22705469-22705488 | Msa0594630:intron | 35.0% | |
| AATCACCCAAAAATTAGGCT+AGG | - | chr4_2:22705652-22705671 | None:intergenic | 35.0% | |
| TCTATCATCAAAAAAGCTCC+TGG | + | chr4_2:22705720-22705739 | Msa0594630:CDS | 35.0% | |
| AGCGTCAAAGATATGTATGA+TGG | + | chr4_2:22705766-22705785 | Msa0594630:CDS | 35.0% | |
| CTTCTCTTTACAGCATTGTA+TGG | - | chr4_2:22705794-22705813 | None:intergenic | 35.0% | |
| CATACAATGCTGTAAAGAGA+AGG | + | chr4_2:22705792-22705811 | Msa0594630:CDS | 35.0% | |
| ! | GTTAGCTTCTTTGATGCTTC+TGG | - | chr4_2:22703588-22703607 | None:intergenic | 40.0% |
| TTGAATCATCAAGGTCAGCA+TGG | - | chr4_2:22703617-22703636 | None:intergenic | 40.0% | |
| !!! | CTTGGTTTTGCACATCCATT+GGG | - | chr4_2:22703692-22703711 | None:intergenic | 40.0% |
| !!! | TCTTGGTTTTGCACATCCAT+TGG | - | chr4_2:22703693-22703712 | None:intergenic | 40.0% |
| AAACCAAGAGCCAGAAGAAA+AGG | + | chr4_2:22703704-22703723 | Msa0594630:CDS | 40.0% | |
| AAAGGTGACAAAAAGAGCAG+TGG | + | chr4_2:22703722-22703741 | Msa0594630:CDS | 40.0% | |
| TTACACTTCTAGTGCAGCAA+CGG | + | chr4_2:22703803-22703822 | Msa0594630:CDS | 40.0% | |
| !! | ATGTGGTGGATGAAGATGTT+TGG | + | chr4_2:22703850-22703869 | Msa0594630:CDS | 40.0% |
| ! | TTGGTTCTTCCTTTGGTTGT+TGG | + | chr4_2:22703993-22704012 | Msa0594630:CDS | 40.0% |
| ATAAAGGGACCAACAACCAA+AGG | - | chr4_2:22704005-22704024 | None:intergenic | 40.0% | |
| GGAAGAGTTTGTCATCCATT+TGG | + | chr4_2:22704178-22704197 | Msa0594630:intron | 40.0% | |
| GTATCTCACCAACTCATACA+TGG | + | chr4_2:22704463-22704482 | Msa0594630:CDS | 40.0% | |
| CAGAAATATAAGTGCACGAG+TGG | - | chr4_2:22704504-22704523 | None:intergenic | 40.0% | |
| GGTATTGTTATGGTATACCC+TGG | - | chr4_2:22704617-22704636 | None:intergenic | 40.0% | |
| TGACGGAGTTTACAATTCCA+TGG | - | chr4_2:22704678-22704697 | None:intergenic | 40.0% | |
| ! | CCAAAACTGTCCTATTTTGC+AGG | - | chr4_2:22704770-22704789 | None:intergenic | 40.0% |
| ! | CCTGCAAAATAGGACAGTTT+TGG | + | chr4_2:22704767-22704786 | Msa0594630:intron | 40.0% |
| !! | TTTTTGGTCCCTGCAAATAC+AGG | + | chr4_2:22704817-22704836 | Msa0594630:intron | 40.0% |
| ! | AAAACTGGCCTGTATTTGCA+GGG | - | chr4_2:22704828-22704847 | None:intergenic | 40.0% |
| ! | TAAAACTGGCCTGTATTTGC+AGG | - | chr4_2:22704829-22704848 | None:intergenic | 40.0% |
| GCAGGGACTAAAACTAAAAC+TGG | - | chr4_2:22704843-22704862 | None:intergenic | 40.0% | |
| TCATCACATAATTGGGGTCA+TGG | - | chr4_2:22704981-22705000 | None:intergenic | 40.0% | |
| !! | CAAAACTGGCCTATTTTGCA+GGG | + | chr4_2:22705302-22705321 | Msa0594630:intron | 40.0% |
| TAAATTTGAACCCAGCATCC+AGG | - | chr4_2:22705741-22705760 | None:intergenic | 40.0% | |
| ! | GTTAGCTTCTTTGATGCTTC+TGG | - | chr4_2:22703588-22703607 | None:intergenic | 40.0% |
| TTGAATCATCAAGGTCAGCA+TGG | - | chr4_2:22703617-22703636 | None:intergenic | 40.0% | |
| !!! | CTTGGTTTTGCACATCCATT+GGG | - | chr4_2:22703692-22703711 | None:intergenic | 40.0% |
| !!! | TCTTGGTTTTGCACATCCAT+TGG | - | chr4_2:22703693-22703712 | None:intergenic | 40.0% |
| AAACCAAGAGCCAGAAGAAA+AGG | + | chr4_2:22703704-22703723 | Msa0594630:CDS | 40.0% | |
| AAAGGTGACAAAAAGAGCAG+TGG | + | chr4_2:22703722-22703741 | Msa0594630:CDS | 40.0% | |
| TTACACTTCTAGTGCAGCAA+CGG | + | chr4_2:22703803-22703822 | Msa0594630:CDS | 40.0% | |
| !! | ATGTGGTGGATGAAGATGTT+TGG | + | chr4_2:22703850-22703869 | Msa0594630:CDS | 40.0% |
| ! | TTGGTTCTTCCTTTGGTTGT+TGG | + | chr4_2:22703993-22704012 | Msa0594630:CDS | 40.0% |
| ATAAAGGGACCAACAACCAA+AGG | - | chr4_2:22704005-22704024 | None:intergenic | 40.0% | |
| GGAAGAGTTTGTCATCCATT+TGG | + | chr4_2:22704178-22704197 | Msa0594630:intron | 40.0% | |
| GTATCTCACCAACTCATACA+TGG | + | chr4_2:22704463-22704482 | Msa0594630:CDS | 40.0% | |
| CAGAAATATAAGTGCACGAG+TGG | - | chr4_2:22704504-22704523 | None:intergenic | 40.0% | |
| GGTATTGTTATGGTATACCC+TGG | - | chr4_2:22704617-22704636 | None:intergenic | 40.0% | |
| TGACGGAGTTTACAATTCCA+TGG | - | chr4_2:22704678-22704697 | None:intergenic | 40.0% | |
| ! | CCAAAACTGTCCTATTTTGC+AGG | - | chr4_2:22704770-22704789 | None:intergenic | 40.0% |
| ! | CCTGCAAAATAGGACAGTTT+TGG | + | chr4_2:22704767-22704786 | Msa0594630:intron | 40.0% |
| !! | TTTTTGGTCCCTGCAAATAC+AGG | + | chr4_2:22704817-22704836 | Msa0594630:intron | 40.0% |
| ! | AAAACTGGCCTGTATTTGCA+GGG | - | chr4_2:22704828-22704847 | None:intergenic | 40.0% |
| ! | TAAAACTGGCCTGTATTTGC+AGG | - | chr4_2:22704829-22704848 | None:intergenic | 40.0% |
| GCAGGGACTAAAACTAAAAC+TGG | - | chr4_2:22704843-22704862 | None:intergenic | 40.0% | |
| TCATCACATAATTGGGGTCA+TGG | - | chr4_2:22704981-22705000 | None:intergenic | 40.0% | |
| !! | CAAAACTGGCCTATTTTGCA+GGG | + | chr4_2:22705302-22705321 | Msa0594630:intron | 40.0% |
| TAAATTTGAACCCAGCATCC+AGG | - | chr4_2:22705741-22705760 | None:intergenic | 40.0% | |
| TTTCCATCTAGCACACCCAA+TGG | + | chr4_2:22703674-22703693 | Msa0594630:CDS | 45.0% | |
| !!! | TCACCTTTTCTTCTGGCTCT+TGG | - | chr4_2:22703710-22703729 | None:intergenic | 45.0% |
| GTGACAAAAAGAGCAGTGGA+AGG | + | chr4_2:22703726-22703745 | Msa0594630:CDS | 45.0% | |
| ATAGCACTCGCCATGATCTT+TGG | + | chr4_2:22704053-22704072 | Msa0594630:intron | 45.0% | |
| TCAAGACTAGGTTCGAACCT+AGG | - | chr4_2:22704133-22704152 | None:intergenic | 45.0% | |
| GCTCTTGTATGCTCAAGACT+AGG | - | chr4_2:22704145-22704164 | None:intergenic | 45.0% | |
| TGTGTGCACCATGTATGAGT+TGG | - | chr4_2:22704474-22704493 | None:intergenic | 45.0% | |
| !! | GGTATTGGTCCCTGCAAAAT+AGG | + | chr4_2:22704757-22704776 | Msa0594630:intron | 45.0% |
| ATCATCACATAACTGGGGTC+AGG | + | chr4_2:22705151-22705170 | Msa0594630:intron | 45.0% | |
| TCATCACATAACTGGGGTCA+GGG | + | chr4_2:22705152-22705171 | Msa0594630:intron | 45.0% | |
| GCAGGGACTAAAACCAAAAC+TGG | + | chr4_2:22705228-22705247 | Msa0594630:intron | 45.0% | |
| ! | CCTGCAAAATAGGCCAGTTT+TGG | - | chr4_2:22705304-22705323 | None:intergenic | 45.0% |
| !! | CCAAAACTGGCCTATTTTGC+AGG | + | chr4_2:22705301-22705320 | Msa0594630:intron | 45.0% |
| !! | GGTATTGGTCCCTGCAAAAT+AGG | - | chr4_2:22704757-22704776 | None:intergenic | 45.0% |
| TCAAAAAAGCTCCTGGATGC+TGG | + | chr4_2:22705727-22705746 | Msa0594630:CDS | 45.0% | |
| CAAAAAAGCTCCTGGATGCT+GGG | + | chr4_2:22705728-22705747 | Msa0594630:CDS | 45.0% | |
| TTTCCATCTAGCACACCCAA+TGG | + | chr4_2:22703674-22703693 | Msa0594630:CDS | 45.0% | |
| !!! | TCACCTTTTCTTCTGGCTCT+TGG | - | chr4_2:22703710-22703729 | None:intergenic | 45.0% |
| GTGACAAAAAGAGCAGTGGA+AGG | + | chr4_2:22703726-22703745 | Msa0594630:CDS | 45.0% | |
| ATAGCACTCGCCATGATCTT+TGG | + | chr4_2:22704053-22704072 | Msa0594630:intron | 45.0% | |
| TCAAGACTAGGTTCGAACCT+AGG | - | chr4_2:22704133-22704152 | None:intergenic | 45.0% | |
| GCTCTTGTATGCTCAAGACT+AGG | - | chr4_2:22704145-22704164 | None:intergenic | 45.0% | |
| TGTGTGCACCATGTATGAGT+TGG | - | chr4_2:22704474-22704493 | None:intergenic | 45.0% | |
| !! | GGTATTGGTCCCTGCAAAAT+AGG | + | chr4_2:22704757-22704776 | Msa0594630:intron | 45.0% |
| ATCATCACATAACTGGGGTC+AGG | + | chr4_2:22705151-22705170 | Msa0594630:intron | 45.0% | |
| TCATCACATAACTGGGGTCA+GGG | + | chr4_2:22705152-22705171 | Msa0594630:intron | 45.0% | |
| GCAGGGACTAAAACCAAAAC+TGG | + | chr4_2:22705228-22705247 | Msa0594630:intron | 45.0% | |
| ! | CCTGCAAAATAGGCCAGTTT+TGG | - | chr4_2:22705304-22705323 | None:intergenic | 45.0% |
| !! | CCAAAACTGGCCTATTTTGC+AGG | + | chr4_2:22705301-22705320 | Msa0594630:intron | 45.0% |
| !! | GGTATTGGTCCCTGCAAAAT+AGG | - | chr4_2:22704757-22704776 | None:intergenic | 45.0% |
| TCAAAAAAGCTCCTGGATGC+TGG | + | chr4_2:22705727-22705746 | Msa0594630:CDS | 45.0% | |
| CAAAAAAGCTCCTGGATGCT+GGG | + | chr4_2:22705728-22705747 | Msa0594630:CDS | 45.0% | |
| !!! | TTTATTTCTTTATTTATTAT+AGG | + | chr4_2:22704273-22704292 | Msa0594630:intron | 5.0% |
| !!! | ATTTTTTTTTTTATAGTTTT+TGG | + | chr4_2:22704924-22704943 | Msa0594630:intron | 5.0% |
| !!! | TTTATTTCTTTATTTATTAT+AGG | + | chr4_2:22704273-22704292 | Msa0594630:intron | 5.0% |
| !!! | ATTTTTTTTTTTATAGTTTT+TGG | + | chr4_2:22704924-22704943 | Msa0594630:intron | 5.0% |
| CATCCATTGGGTGTGCTAGA+TGG | - | chr4_2:22703680-22703699 | None:intergenic | 50.0% | |
| AGGTTCGAACCTAGGACCTT+AGG | - | chr4_2:22704125-22704144 | None:intergenic | 50.0% | |
| CATCCATTGGGTGTGCTAGA+TGG | - | chr4_2:22703680-22703699 | None:intergenic | 50.0% | |
| AGGTTCGAACCTAGGACCTT+AGG | - | chr4_2:22704125-22704144 | None:intergenic | 50.0% | |
| AGAGCAGTGGAAGGAACCCT+AGG | + | chr4_2:22703735-22703754 | Msa0594630:CDS | 55.0% | |
| !! | ATCCATTTGGGTTGCGCGTG+CGG | + | chr4_2:22704191-22704210 | Msa0594630:intron | 55.0% |
| AGAGCAGTGGAAGGAACCCT+AGG | + | chr4_2:22703735-22703754 | Msa0594630:CDS | 55.0% | |
| !! | ATCCATTTGGGTTGCGCGTG+CGG | + | chr4_2:22704191-22704210 | Msa0594630:intron | 55.0% |
| TTCCGCACGCGCAACCCAAA+TGG | - | chr4_2:22704196-22704215 | None:intergenic | 60.0% | |
| TTCCGCACGCGCAACCCAAA+TGG | - | chr4_2:22704196-22704215 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 22703555 | 22705825 | 22703555 | ID=Msa0594630;Name=Msa0594630 |
| chr4_2 | mRNA | 22703555 | 22705825 | 22703555 | ID=Msa0594630-mRNA-1;Parent=Msa0594630;Name=Msa0594630-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|1|1|1|3|0|266 |
| chr4_2 | exon | 22703555 | 22704014 | 22703555 | ID=Msa0594630-mRNA-1:exon:6158;Parent=Msa0594630-mRNA-1 |
| chr4_2 | exon | 22704444 | 22704639 | 22704444 | ID=Msa0594630-mRNA-1:exon:6159;Parent=Msa0594630-mRNA-1 |
| chr4_2 | exon | 22705681 | 22705825 | 22705681 | ID=Msa0594630-mRNA-1:exon:6160;Parent=Msa0594630-mRNA-1 |
| chr4_2 | CDS | 22703555 | 22704014 | 22703555 | ID=Msa0594630-mRNA-1:cds;Parent=Msa0594630-mRNA-1 |
| chr4_2 | CDS | 22704444 | 22704639 | 22704444 | ID=Msa0594630-mRNA-1:cds;Parent=Msa0594630-mRNA-1 |
| chr4_2 | CDS | 22705681 | 22705825 | 22705681 | ID=Msa0594630-mRNA-1:cds;Parent=Msa0594630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
