Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0601650 | XP_003606194.2 | 92.047 | 591 | 31 | 1 | 30 | 604 | 25 | 615 | 0.0 | 1125 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0601650 | sp|F4HVY0|CER1_ARATH | 53.167 | 600 | 256 | 5 | 30 | 604 | 25 | 624 | 0.0 | 672 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0584130 | Msa0601650 | 0.850815 | 1.330383e-60 | -8.615850e-47 |
| Msa0601650 | Msa0641900 | 0.873645 | 1.252203e-67 | -8.615850e-47 |
| Msa0601650 | Msa0680830 | 0.811504 | 6.773538e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0601650 | MtrunA17_Chr4g0026761 | 88.156 | 591 | 54 | 1 | 30 | 604 | 25 | 615 | 0.0 | 1092 |
| Msa0601650 | MtrunA17_Chr7g0256411 | 75.641 | 624 | 129 | 4 | 1 | 602 | 21 | 643 | 0.0 | 972 |
| Msa0601650 | MtrunA17_Chr7g0256371 | 78.741 | 588 | 107 | 2 | 30 | 601 | 34 | 619 | 0.0 | 971 |
| Msa0601650 | MtrunA17_Chr7g0256391 | 78.194 | 587 | 112 | 2 | 31 | 601 | 26 | 612 | 0.0 | 953 |
| Msa0601650 | MtrunA17_Chr4g0026811 | 91.964 | 448 | 20 | 1 | 30 | 461 | 11 | 458 | 0.0 | 843 |
| Msa0601650 | MtrunA17_Chr8g0337081 | 61.383 | 593 | 209 | 3 | 30 | 602 | 25 | 617 | 0.0 | 733 |
| Msa0601650 | MtrunA17_Chr8g0337101 | 57.479 | 595 | 232 | 5 | 30 | 603 | 61 | 655 | 0.0 | 726 |
| Msa0601650 | MtrunA17_Chr4g0073231 | 32.224 | 571 | 360 | 6 | 58 | 601 | 55 | 625 | 1.76e-100 | 318 |
| Msa0601650 | MtrunA17_Chr4g0026821 | 87.912 | 91 | 11 | 0 | 460 | 550 | 3 | 93 | 4.06e-52 | 174 |
| Msa0601650 | MtrunA17_Chr2g0305431 | 32.283 | 254 | 152 | 3 | 30 | 263 | 22 | 275 | 1.51e-42 | 155 |
| Msa0601650 | MtrunA17_Chr4g0026831 | 97.872 | 47 | 1 | 0 | 558 | 604 | 1 | 47 | 2.27e-27 | 104 |
| Msa0601650 | MtrunA17_Chr2g0305451 | 31.019 | 216 | 141 | 3 | 393 | 600 | 2 | 217 | 2.33e-27 | 110 |
| Msa0601650 | MtrunA17_Chr2g0305441 | 31.897 | 116 | 79 | 0 | 278 | 393 | 43 | 158 | 1.15e-12 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0601650 | AT1G02205.4 | 53.000 | 600 | 257 | 4 | 30 | 604 | 26 | 625 | 0.0 | 673 |
| Msa0601650 | AT1G02205.2 | 53.167 | 600 | 256 | 5 | 30 | 604 | 25 | 624 | 0.0 | 672 |
| Msa0601650 | AT1G02205.3 | 52.562 | 605 | 257 | 4 | 30 | 604 | 25 | 629 | 0.0 | 667 |
| Msa0601650 | AT2G37700.3 | 52.181 | 596 | 263 | 5 | 30 | 604 | 25 | 619 | 0.0 | 627 |
| Msa0601650 | AT1G02190.1 | 52.333 | 600 | 255 | 9 | 30 | 600 | 25 | 622 | 0.0 | 626 |
| Msa0601650 | AT2G37700.1 | 51.597 | 595 | 259 | 5 | 30 | 604 | 25 | 610 | 0.0 | 622 |
| Msa0601650 | AT1G02190.2 | 52.000 | 600 | 253 | 10 | 30 | 600 | 25 | 618 | 0.0 | 617 |
| Msa0601650 | AT2G37700.4 | 47.987 | 596 | 251 | 7 | 30 | 604 | 25 | 582 | 0.0 | 558 |
| Msa0601650 | AT1G02205.1 | 51.648 | 455 | 214 | 2 | 156 | 604 | 6 | 460 | 3.20e-173 | 500 |
| Msa0601650 | AT2G37700.2 | 53.229 | 449 | 192 | 3 | 30 | 461 | 25 | 472 | 4.35e-167 | 485 |
| Msa0601650 | AT1G02205.5 | 48.942 | 378 | 187 | 2 | 233 | 604 | 8 | 385 | 1.58e-135 | 401 |
| Msa0601650 | AT5G57800.1 | 33.002 | 603 | 367 | 12 | 30 | 596 | 22 | 623 | 4.66e-100 | 318 |
Find 136 sgRNAs with CRISPR-Local
Find 361 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGTCTGTGGTTGCACTTTA+TGG | 0.100086 | 4_2:+44484733 | Msa0601650:CDS |
| CCTATATATGACTACATTTA+TGG | 0.133350 | 4_2:+44485323 | Msa0601650:CDS |
| TAACGATAACCTGTCATTAA+AGG | 0.225872 | 4_2:-44489146 | None:intergenic |
| TTTGGAGGAAAATGAGAAAA+AGG | 0.243101 | 4_2:-44487556 | None:intergenic |
| ATTAGTGCATCTATTTGATT+AGG | 0.243941 | 4_2:+44489168 | Msa0601650:three_prime_UTR |
| CCAAACTTGTCTGATTAGTT+TGG | 0.262919 | 4_2:-44488871 | None:intergenic |
| AAGCAGGAGAAGAGTTTCTT+AGG | 0.278047 | 4_2:-44484814 | None:intergenic |
| TATTTGACATTGAGAAAGTA+TGG | 0.287267 | 4_2:+44488809 | Msa0601650:CDS |
| AGCATAGAGCACATTGTAAA+AGG | 0.304031 | 4_2:-44485527 | None:intergenic |
| ATGAACATTCCATCTTTCTA+AGG | 0.305907 | 4_2:-44488770 | None:intergenic |
| CAAGCACTCATGACTCTTCT+TGG | 0.310873 | 4_2:-44488724 | None:intergenic |
| TGTCGACTTGGTCGAATTCC+AGG | 0.311368 | 4_2:-44483574 | None:intergenic |
| CCAACCCTCAAACATCTAAA+TGG | 0.316593 | 4_2:+44485486 | Msa0601650:CDS |
| ACAACTTTAATCTTCAGATT+TGG | 0.323949 | 4_2:-44486062 | None:intergenic |
| TCTCATATTCCCTTATATAT+TGG | 0.324186 | 4_2:+44483469 | Msa0601650:CDS |
| AATAAAGTGAAAACAACTTC+TGG | 0.333048 | 4_2:+44489011 | Msa0601650:three_prime_UTR |
| AATAGGTGACTGTATTATAT+AGG | 0.334955 | 4_2:+44486509 | Msa0601650:intron |
| ACTCAGGGGCAAGTTTAATA+AGG | 0.340636 | 4_2:+44486151 | Msa0601650:CDS |
| CCAAACTAATCAGACAAGTT+TGG | 0.352229 | 4_2:+44488871 | Msa0601650:exon |
| AGCACTTGATTCGTCCCTTT+GGG | 0.357623 | 4_2:-44486128 | None:intergenic |
| AGCATTCGGACCAATATATA+AGG | 0.369290 | 4_2:-44483479 | None:intergenic |
| CAAGTTTAATAAGGTTGCTT+TGG | 0.369770 | 4_2:+44486160 | Msa0601650:CDS |
| CTCATCACAAATTCATACTA+TGG | 0.373931 | 4_2:+44482442 | Msa0601650:CDS |
| TAGCACTTGATTCGTCCCTT+TGG | 0.380060 | 4_2:-44486129 | None:intergenic |
| TTAACCTTTGGAGTATTGAT+TGG | 0.387155 | 4_2:-44486592 | None:intergenic |
| ATGAGTGCTTGGCGCATTGC+TGG | 0.389012 | 4_2:+44488736 | Msa0601650:CDS |
| GTTTCCAAGGCCAGTTTGTA+AGG | 0.398023 | 4_2:-44482481 | None:intergenic |
| CGCTGCATCACACAAAATTT+AGG | 0.401705 | 4_2:+44485279 | Msa0601650:CDS |
| TTAGTGCATCTATTTGATTA+GGG | 0.408358 | 4_2:+44489169 | Msa0601650:three_prime_UTR |
| TGTTTGAGGGTTGGAGGCTA+AGG | 0.409276 | 4_2:-44485477 | None:intergenic |
| TCTGTAGGACTTATCATTGA+TGG | 0.409984 | 4_2:-44487613 | None:intergenic |
| GAAACCTCTTGGGAGCTTCA+AGG | 0.410003 | 4_2:+44482499 | Msa0601650:CDS |
| CCATCTTTCAACTACGCTTA+GGG | 0.416116 | 4_2:+44485447 | Msa0601650:CDS |
| CCATAAATGTAGTCATATAT+AGG | 0.417569 | 4_2:-44485323 | None:intergenic |
| TCCATCTTTCAACTACGCTT+AGG | 0.422294 | 4_2:+44485446 | Msa0601650:CDS |
| ATAGGTGACTGTATTATATA+GGG | 0.422701 | 4_2:+44486510 | Msa0601650:intron |
| TATGCCAACATTTCAGCAAA+TGG | 0.424110 | 4_2:-44484661 | None:intergenic |
| TGAACAATGTTGTCAACATT+GGG | 0.427233 | 4_2:-44484702 | None:intergenic |
| TGTATGTGAGATACTTCAAT+TGG | 0.433532 | 4_2:-44484840 | None:intergenic |
| GCATCCTTACAAACTGGCCT+TGG | 0.438647 | 4_2:+44482477 | Msa0601650:CDS |
| CTGAAGATTAAAGTTGTAGA+TGG | 0.439460 | 4_2:+44486068 | Msa0601650:CDS |
| TCACGCTACCAAACTGCTAA+AGG | 0.439910 | 4_2:+44483527 | Msa0601650:CDS |
| CTTACAGCTCTCTTGCATGC+TGG | 0.442026 | 4_2:+44484195 | Msa0601650:CDS |
| CACGCTACCAAACTGCTAAA+GGG | 0.443440 | 4_2:+44483528 | Msa0601650:CDS |
| ATGAACAATGTTGTCAACAT+TGG | 0.446199 | 4_2:-44484703 | None:intergenic |
| GTTTGTAAGGATGCCCGCTT+TGG | 0.446245 | 4_2:-44482468 | None:intergenic |
| ACTTTACGCAATATTTCCTA+TGG | 0.446705 | 4_2:+44484134 | Msa0601650:CDS |
| AACTGGCCTTGGAAACCTCT+TGG | 0.451153 | 4_2:+44482488 | Msa0601650:CDS |
| GAATGCTGCACAATCAGATA+TGG | 0.455928 | 4_2:+44483495 | Msa0601650:CDS |
| TATGGTTAGTTGGAGATGAA+TGG | 0.456856 | 4_2:+44487488 | Msa0601650:CDS |
| TGTGTTAAGTGCACCACATC+TGG | 0.460275 | 4_2:-44485407 | None:intergenic |
| GGAATATGAGATAGTATGTT+GGG | 0.461460 | 4_2:-44483457 | None:intergenic |
| GATTAGTTTGGAATCTTAAG+AGG | 0.464881 | 4_2:-44488859 | None:intergenic |
| GGACGAATCAAGTGCTACTC+AGG | 0.464937 | 4_2:+44486135 | Msa0601650:CDS |
| AGGTACCATTTAGATGTTTG+AGG | 0.465285 | 4_2:-44485491 | None:intergenic |
| CCCTAAGCGTAGTTGAAAGA+TGG | 0.468595 | 4_2:-44485447 | None:intergenic |
| AAGCGGGCATCCTTACAAAC+TGG | 0.468776 | 4_2:+44482471 | Msa0601650:CDS |
| ACTGGCCTTGGAAACCTCTT+GGG | 0.470484 | 4_2:+44482489 | Msa0601650:CDS |
| CCTCCAAAGAAAATGCGAAA+AGG | 0.474183 | 4_2:+44487571 | Msa0601650:CDS |
| ATATCTGATTGTGCAGCATT+CGG | 0.476826 | 4_2:-44483493 | None:intergenic |
| CCCCGTGTCCAATGGAAGAT+TGG | 0.477610 | 4_2:+44486561 | Msa0601650:CDS |
| GGTACCATTTAGATGTTTGA+GGG | 0.478371 | 4_2:-44485490 | None:intergenic |
| CATACTATGGCTTCCAAAGC+GGG | 0.482595 | 4_2:+44482455 | Msa0601650:CDS |
| AATTGGTTTCTCTGTCGACT+TGG | 0.483201 | 4_2:-44483586 | None:intergenic |
| CAAATAAGTCCTTTAATGAC+AGG | 0.483379 | 4_2:+44489137 | Msa0601650:three_prime_UTR |
| ATCTAACAGATATGGTTAGT+TGG | 0.485488 | 4_2:+44487478 | Msa0601650:intron |
| CCATTTAGATGTTTGAGGGT+TGG | 0.485770 | 4_2:-44485486 | None:intergenic |
| TTTAGATGTTTGAGGGTTGG+AGG | 0.486191 | 4_2:-44485483 | None:intergenic |
| TAATTCATGCCTTAGAAAGA+TGG | 0.487947 | 4_2:+44488761 | Msa0601650:CDS |
| TGCTTGTGACTTGGATTAGT+GGG | 0.489293 | 4_2:+44485546 | Msa0601650:CDS |
| CAGTGGAATTCTTATACTAC+TGG | 0.491997 | 4_2:+44484220 | Msa0601650:CDS |
| ATGCTTGTGACTTGGATTAG+TGG | 0.496658 | 4_2:+44485545 | Msa0601650:CDS |
| AAGATCTCAAGCTGCAGTGT+TGG | 0.498853 | 4_2:+44485600 | Msa0601650:CDS |
| GCATTCGGACCAATATATAA+GGG | 0.500102 | 4_2:-44483478 | None:intergenic |
| AGTTTGGAATCTTAAGAGGT+AGG | 0.500103 | 4_2:-44488855 | None:intergenic |
| ATGGTTAGTTGGAGATGAAT+GGG | 0.501106 | 4_2:+44487489 | Msa0601650:CDS |
| GAAGTTACTTTCTAAAACAA+TGG | 0.502211 | 4_2:-44485573 | None:intergenic |
| GGGAATATGAGATAGTATGT+TGG | 0.504673 | 4_2:-44483458 | None:intergenic |
| TAAAAGGCCACATTAAATTG+AGG | 0.505608 | 4_2:-44485511 | None:intergenic |
| AAGAATTGTTGACAAAGGCC+TGG | 0.510050 | 4_2:+44483556 | Msa0601650:CDS |
| CGAAGGGTCCCCGTGTCCAA+TGG | 0.513810 | 4_2:+44486553 | Msa0601650:CDS |
| CAAGAAGAGTCATGAGTGCT+TGG | 0.516934 | 4_2:+44488725 | Msa0601650:CDS |
| GCTGCATAAAGCATTAGTAA+TGG | 0.517218 | 4_2:-44486183 | None:intergenic |
| ACTGCGCACTTTATATTGAA+AGG | 0.517488 | 4_2:+44486036 | Msa0601650:CDS |
| TACCAACCTCACACGAATGC+AGG | 0.521065 | 4_2:-44487645 | None:intergenic |
| GGAGTAAAGGTGATAAGTCT+AGG | 0.524556 | 4_2:+44485822 | Msa0601650:CDS |
| AGCTGAAAGAGCTTGAACGA+AGG | 0.524659 | 4_2:+44486536 | Msa0601650:CDS |
| AATAAGCCAAATATTTGCCA+TGG | 0.526425 | 4_2:+44489223 | Msa0601650:three_prime_UTR |
| TGTTCTCCACCATGGTAAGT+TGG | 0.530657 | 4_2:-44484160 | None:intergenic |
| CTATGGCTGCCAACTTACCA+TGG | 0.536219 | 4_2:+44484151 | Msa0601650:CDS |
| TGATAGAGCCAATCTTCCAT+TGG | 0.545464 | 4_2:-44486569 | None:intergenic |
| TTATCATTGATGGTGTATAG+TGG | 0.546801 | 4_2:-44487603 | None:intergenic |
| GTATGTGAGATACTTCAATT+GGG | 0.552660 | 4_2:-44484839 | None:intergenic |
| AAGTCGACAGAGAAACCAAT+TGG | 0.553427 | 4_2:+44483588 | Msa0601650:CDS |
| TGCTTAACAACATTCCCAAA+GGG | 0.556459 | 4_2:+44486114 | Msa0601650:CDS |
| GGCTGATTTAAGTGGAGTAA+AGG | 0.558217 | 4_2:+44485809 | Msa0601650:CDS |
| ACATCCATTTGCTGAAATGT+TGG | 0.559199 | 4_2:+44484657 | Msa0601650:CDS |
| TGTGCTCTATGCTTGTGACT+TGG | 0.561901 | 4_2:+44485537 | Msa0601650:CDS |
| GCTGAAAGAGCTTGAACGAA+GGG | 0.563864 | 4_2:+44486537 | Msa0601650:CDS |
| AAAAGAGGAGTCACCAGATG+TGG | 0.574868 | 4_2:+44485394 | Msa0601650:CDS |
| AAGCTCCCAAGAGGTTTCCA+AGG | 0.582916 | 4_2:-44482494 | None:intergenic |
| CAGTAGTATAAGAATTCCAC+TGG | 0.586940 | 4_2:-44484219 | None:intergenic |
| ATTTGACATTGAGAAAGTAT+GGG | 0.587113 | 4_2:+44488810 | Msa0601650:CDS |
| GCCAATCTTCCATTGGACAC+GGG | 0.589402 | 4_2:-44486562 | None:intergenic |
| CATGGTAAGTTGGCAGCCAT+AGG | 0.589495 | 4_2:-44484150 | None:intergenic |
| TCTTAAGAGGTAGGTAGCCA+TGG | 0.590035 | 4_2:-44488846 | None:intergenic |
| TGGCTTATTGATATAAAACA+TGG | 0.590486 | 4_2:-44489209 | None:intergenic |
| GGCTTCATATGTAGAATCTG+AGG | 0.595173 | 4_2:-44485360 | None:intergenic |
| AGCCTGTTTGAAGAGAAAAG+AGG | 0.599225 | 4_2:+44485379 | Msa0601650:CDS |
| GAGCAAATGCAAGCATCAGA+AGG | 0.600767 | 4_2:+44487520 | Msa0601650:CDS |
| ATATGCTATGAGCAATCCAC+GGG | 0.601636 | 4_2:-44483409 | None:intergenic |
| AGCCAATCTTCCATTGGACA+CGG | 0.601856 | 4_2:-44486563 | None:intergenic |
| GACGAATCAAGTGCTACTCA+GGG | 0.603036 | 4_2:+44486136 | Msa0601650:CDS |
| AATGGTACCTCAATTTAATG+TGG | 0.603244 | 4_2:+44485504 | Msa0601650:CDS |
| ATAATGATGGCTGATTTAAG+TGG | 0.604119 | 4_2:+44485801 | Msa0601650:CDS |
| TCTCTTGCATGCTGGACCAG+TGG | 0.604144 | 4_2:+44484203 | Msa0601650:CDS |
| TGCAGGTTTATGACTTCTGT+AGG | 0.610412 | 4_2:-44487628 | None:intergenic |
| ATCACCAATCAATACTCCAA+AGG | 0.614842 | 4_2:+44486588 | Msa0601650:CDS |
| GATTGAAGAGACAATAATGA+TGG | 0.615276 | 4_2:+44485788 | Msa0601650:CDS |
| TTACCATGGTGGAGAACAGA+TGG | 0.618214 | 4_2:+44484165 | Msa0601650:CDS |
| AGATGGAATGTTCATGAGTG+TGG | 0.624003 | 4_2:+44488778 | Msa0601650:CDS |
| AAAAGAAGAATTGTTGACAA+AGG | 0.629736 | 4_2:+44483551 | Msa0601650:CDS |
| CCAATCTTCCATTGGACACG+GGG | 0.631347 | 4_2:-44486561 | None:intergenic |
| CATAAACCTGCATTCGTGTG+AGG | 0.635395 | 4_2:+44487639 | Msa0601650:CDS |
| GTGCTTAACAACATTCCCAA+AGG | 0.636164 | 4_2:+44486113 | Msa0601650:CDS |
| TATATGCTATGAGCAATCCA+CGG | 0.638673 | 4_2:-44483410 | None:intergenic |
| TCATACTATGGCTTCCAAAG+CGG | 0.640747 | 4_2:+44482454 | Msa0601650:CDS |
| ACAACCTTGAAGCTCCCAAG+AGG | 0.664103 | 4_2:-44482503 | None:intergenic |
| TGGGAAGCAAGTATTCGCCA+TGG | 0.673129 | 4_2:+44488829 | Msa0601650:CDS |
| ACACCATCTGTTCTCCACCA+TGG | 0.679185 | 4_2:-44484168 | None:intergenic |
| TGACTACATTTATGGTACTG+TGG | 0.682689 | 4_2:+44485331 | Msa0601650:CDS |
| ATGTGAGATACTTCAATTGG+GGG | 0.693874 | 4_2:-44484837 | None:intergenic |
| TGGCTGCCAACTTACCATGG+TGG | 0.698674 | 4_2:+44484154 | Msa0601650:CDS |
| TATGTGAGATACTTCAATTG+GGG | 0.722375 | 4_2:-44484838 | None:intergenic |
| ACGAATCAAGTGCTACTCAG+GGG | 0.724211 | 4_2:+44486137 | Msa0601650:CDS |
| ATGGTGGAGAACAGATGGTG+TGG | 0.733193 | 4_2:+44484170 | Msa0601650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+TGG | - | chr4_2:44487269-44487288 | None:intergenic | 0.0% |
| !!! | TAATAAAAATTTTTCTACTT+TGG | - | chr4_2:44483205-44483224 | None:intergenic | 10.0% |
| !! | TCTATATATGTATAAATAAA+GGG | - | chr4_2:44484344-44484363 | None:intergenic | 10.0% |
| !! | TTCTATATATGTATAAATAA+AGG | - | chr4_2:44484345-44484364 | None:intergenic | 10.0% |
| !!! | TTAATTTTTCCAATTATTTT+AGG | + | chr4_2:44484897-44484916 | Msa0601650:intron | 10.0% |
| !!! | TAATTTTTCCAATTATTTTA+GGG | + | chr4_2:44484898-44484917 | Msa0601650:intron | 10.0% |
| !!! | TTTTTTATGTTGTTTATTTT+CGG | + | chr4_2:44484985-44485004 | Msa0601650:intron | 10.0% |
| !!! | ATATTTCTTAATAGAATTTT+TGG | - | chr4_2:44486359-44486378 | None:intergenic | 10.0% |
| !!! | AAAGTTTAATTTTATTCTAA+TGG | + | chr4_2:44486473-44486492 | Msa0601650:intron | 10.0% |
| !! | ATAATATTAGAAATATGAAT+AGG | - | chr4_2:44487456-44487475 | None:intergenic | 10.0% |
| !!! | ATTTAATCTTCTTTTTTTTT+GGG | + | chr4_2:44487911-44487930 | Msa0601650:intron | 10.0% |
| !! | TTAAAAGTTTATAAGTTATT+AGG | - | chr4_2:44488128-44488147 | None:intergenic | 10.0% |
| !!! | ACTAAATCAAATTTAAAATT+TGG | - | chr4_2:44488170-44488189 | None:intergenic | 10.0% |
| !!! | TCTTTTTTTTTTTTTTTTGA+GGG | - | chr4_2:44488347-44488366 | None:intergenic | 10.0% |
| !!! | TTCTTTTTTTTTTTTTTTTG+AGG | - | chr4_2:44488348-44488367 | None:intergenic | 10.0% |
| !!! | AATAAATTAATTTGTGGAAA+GGG | - | chr4_2:44482619-44482638 | None:intergenic | 15.0% |
| !!! | TAATAAATTAATTTGTGGAA+AGG | - | chr4_2:44482620-44482639 | None:intergenic | 15.0% |
| !!! | GAAAGTAATAAATTAATTTG+TGG | - | chr4_2:44482625-44482644 | None:intergenic | 15.0% |
| !! | AAAAGTAATAAATGACATAT+TGG | - | chr4_2:44482650-44482669 | None:intergenic | 15.0% |
| !!! | TTTTTTCTTATAAATAGAAC+CGG | - | chr4_2:44483007-44483026 | None:intergenic | 15.0% |
| !! | TAGCACTTATTTAATTAATT+AGG | - | chr4_2:44483652-44483671 | None:intergenic | 15.0% |
| !! | GAATAATTAATGTATCTTAT+TGG | + | chr4_2:44484459-44484478 | Msa0601650:intron | 15.0% |
| !!! | TAAGAAACAATTGATTTTTT+TGG | - | chr4_2:44484519-44484538 | None:intergenic | 15.0% |
| !!! | ATCAATTGTTTCTTATAATA+AGG | + | chr4_2:44484524-44484543 | Msa0601650:intron | 15.0% |
| !! | ACAATAAGTTTCTTATATTA+GGG | - | chr4_2:44484605-44484624 | None:intergenic | 15.0% |
| !! | AACAATAAGTTTCTTATATT+AGG | - | chr4_2:44484606-44484625 | None:intergenic | 15.0% |
| !! | TAATATAAGAAACTTATTGT+TGG | + | chr4_2:44484605-44484624 | Msa0601650:intron | 15.0% |
| !!! | TTTTTATGTTGTTTATTTTC+GGG | + | chr4_2:44484986-44485005 | Msa0601650:intron | 15.0% |
| !!! | TTCTTTATTGCATATTTTTA+TGG | + | chr4_2:44485194-44485213 | Msa0601650:intron | 15.0% |
| !! | TAAAACAATAAATTAACCTT+TGG | - | chr4_2:44486607-44486626 | None:intergenic | 15.0% |
| !! | TCTGATTTCAAATTTAAATA+AGG | - | chr4_2:44486915-44486934 | None:intergenic | 15.0% |
| !!! | TTATTTAAATTTGAAATCAG+AGG | + | chr4_2:44486914-44486933 | Msa0601650:intron | 15.0% |
| !!! | TATTTAAATTTGAAATCAGA+GGG | + | chr4_2:44486915-44486934 | Msa0601650:intron | 15.0% |
| !! | ATATATATATAACAAAGAAG+AGG | - | chr4_2:44487062-44487081 | None:intergenic | 15.0% |
| !!! | TCTTCTTTGTTATATATATA+TGG | + | chr4_2:44487061-44487080 | Msa0601650:intron | 15.0% |
| !! | TATTATAAATCTAACAGATA+TGG | + | chr4_2:44487470-44487489 | Msa0601650:intron | 15.0% |
| !! | CAAAAAAAAAGAAGATTAAA+TGG | - | chr4_2:44487912-44487931 | None:intergenic | 15.0% |
| !!! | CATTTAATCTTCTTTTTTTT+TGG | + | chr4_2:44487910-44487929 | Msa0601650:intron | 15.0% |
| !! | ATTATCTATAGTTATCTATT+TGG | + | chr4_2:44487976-44487995 | Msa0601650:intron | 15.0% |
| !!! | ATTAAATTGTTGATTTGATT+TGG | + | chr4_2:44488207-44488226 | Msa0601650:intron | 15.0% |
| !! | TATCAAAATTAATGTCTTAT+TGG | + | chr4_2:44488535-44488554 | Msa0601650:intron | 15.0% |
| !!! | CTTTTGCTTATATTTCATTT+CGG | + | chr4_2:44482881-44482900 | Msa0601650:intron | 20.0% |
| !! | GTTCAAAAATCAATAAACAT+TGG | + | chr4_2:44482960-44482979 | Msa0601650:intron | 20.0% |
| !! | ATGTTTCTTATAAATAGAAC+CGG | + | chr4_2:44483116-44483135 | Msa0601650:intron | 20.0% |
| !! | TAAAAAATTCTTGAAACTTG+TGG | - | chr4_2:44483261-44483280 | None:intergenic | 20.0% |
| !!! | ATAGCATATACTCTTTTATA+TGG | + | chr4_2:44483423-44483442 | Msa0601650:CDS | 20.0% |
| !!! | TAGCATATACTCTTTTATAT+GGG | + | chr4_2:44483424-44483443 | Msa0601650:CDS | 20.0% |
| !! | ATTGAAATTTATGAACCAAT+TGG | - | chr4_2:44483606-44483625 | None:intergenic | 20.0% |
| !! | CATTCAATAAATAATGTATG+TGG | - | chr4_2:44483766-44483785 | None:intergenic | 20.0% |
| !!! | AATTGTGTATGATTTTGTTA+TGG | + | chr4_2:44483895-44483914 | Msa0601650:intron | 20.0% |
| !!! | GTCAACTTTTTCTTATAATA+AGG | - | chr4_2:44484425-44484444 | None:intergenic | 20.0% |
| !!! | TAAGAAAAAGTTGACTTTTT+AGG | + | chr4_2:44484430-44484449 | Msa0601650:intron | 20.0% |
| !! | GGTTTACAAAAAATGTATAA+AGG | - | chr4_2:44484584-44484603 | None:intergenic | 20.0% |
| !! | AAACAGATAATACAAACTAA+AGG | - | chr4_2:44485032-44485051 | None:intergenic | 20.0% |
| !! | ATATAAAGTTCGAAATTCAT+GGG | - | chr4_2:44485664-44485683 | None:intergenic | 20.0% |
| !! | AATATAAAGTTCGAAATTCA+TGG | - | chr4_2:44485665-44485684 | None:intergenic | 20.0% |
| !!! | TTTTATTCTCTATATCCATA+AGG | + | chr4_2:44485685-44485704 | Msa0601650:intron | 20.0% |
| !!! | CAATTTTAGCTTACAATTAA+AGG | - | chr4_2:44486250-44486269 | None:intergenic | 20.0% |
| !!! | TTATTGTTTTAATCCTTCAT+TGG | + | chr4_2:44486616-44486635 | Msa0601650:intron | 20.0% |
| !! | AATAGTATTAAACTATGAGA+AGG | + | chr4_2:44486694-44486713 | Msa0601650:intron | 20.0% |
| !!! | ATCTTCTTGTGTTTTTTTTT+TGG | + | chr4_2:44486744-44486763 | Msa0601650:intron | 20.0% |
| !! | AAACACAAAAACAAGAAAAT+GGG | - | chr4_2:44486979-44486998 | None:intergenic | 20.0% |
| !! | AAAACACAAAAACAAGAAAA+TGG | - | chr4_2:44486980-44486999 | None:intergenic | 20.0% |
| !! | GCAAAATTATAACTAAAAAG+TGG | - | chr4_2:44487147-44487166 | None:intergenic | 20.0% |
| !!! | CTCGACTTTTATTAATTATA+GGG | - | chr4_2:44487707-44487726 | None:intergenic | 20.0% |
| !!! | TCTCGACTTTTATTAATTAT+AGG | - | chr4_2:44487708-44487727 | None:intergenic | 20.0% |
| !!! | TGAAGTTTAATTTAGCAATA+TGG | + | chr4_2:44487867-44487886 | Msa0601650:intron | 20.0% |
| !!! | GAAGTTTAATTTAGCAATAT+GGG | + | chr4_2:44487868-44487887 | Msa0601650:intron | 20.0% |
| !!! | CTTATATTTTAAGTGAAAAC+AGG | - | chr4_2:44488957-44488976 | None:intergenic | 20.0% |
| ! | AGTAATAAATGACATATTGG+TGG | - | chr4_2:44482647-44482666 | None:intergenic | 25.0% |
| ! | TCTCTATTAAAGTGAATGTT+AGG | + | chr4_2:44482676-44482695 | Msa0601650:intron | 25.0% |
| !!! | ATTTTTGCCTATATTTTTGG+AGG | - | chr4_2:44482796-44482815 | None:intergenic | 25.0% |
| ! | TCCAAAAATATAGGCAAAAA+TGG | + | chr4_2:44482795-44482814 | Msa0601650:intron | 25.0% |
| !!! | ACCATTTTTGCCTATATTTT+TGG | - | chr4_2:44482799-44482818 | None:intergenic | 25.0% |
| !!! | AGTTTAAAAGTTGATGTATG+TGG | - | chr4_2:44482857-44482876 | None:intergenic | 25.0% |
| !! | CTAGAATTCTTCCATATTTT+AGG | - | chr4_2:44482933-44482952 | None:intergenic | 25.0% |
| ! | CTAAAATATGGAAGAATTCT+AGG | + | chr4_2:44482931-44482950 | Msa0601650:intron | 25.0% |
| ! | TACTATTTGTATACTCATTC+CGG | - | chr4_2:44483138-44483157 | None:intergenic | 25.0% |
| ! | TCTCATATTCCCTTATATAT+TGG | + | chr4_2:44483469-44483488 | Msa0601650:CDS | 25.0% |
| ! | AAAAGAAGAATTGTTGACAA+AGG | + | chr4_2:44483551-44483570 | Msa0601650:CDS | 25.0% |
| ! | TATATAATTAATACTCCCTC+CGG | + | chr4_2:44483670-44483689 | Msa0601650:intron | 25.0% |
| !! | AATTTGCTTATAATAGTGAC+CGG | - | chr4_2:44483801-44483820 | None:intergenic | 25.0% |
| !! | AATTTGCTTATAATAGTGAC+CGG | + | chr4_2:44483801-44483820 | Msa0601650:intron | 25.0% |
| ! | CATATATAGAAAATGCTAAC+CGG | + | chr4_2:44484354-44484373 | Msa0601650:intron | 25.0% |
| !! | CTTTTTCTTATAATAAGGAC+CGG | - | chr4_2:44484420-44484439 | None:intergenic | 25.0% |
| !! | TTGTTTCTTATAATAAGGAC+CGG | + | chr4_2:44484529-44484548 | Msa0601650:intron | 25.0% |
| !!! | ATCGATTTTATGAACAACAT+GGG | + | chr4_2:44484769-44484788 | Msa0601650:CDS | 25.0% |
| !!! | CATACAAAGTTTGATTTTAC+AGG | + | chr4_2:44485249-44485268 | Msa0601650:intron | 25.0% |
| ! | CCATAAATGTAGTCATATAT+AGG | - | chr4_2:44485326-44485345 | None:intergenic | 25.0% |
| ! | CCTATATATGACTACATTTA+TGG | + | chr4_2:44485323-44485342 | Msa0601650:CDS | 25.0% |
| !!! | GAAGTTACTTTCTAAAACAA+TGG | - | chr4_2:44485576-44485595 | None:intergenic | 25.0% |
| !!! | CATACTTGTGTTTTAAATCT+TGG | - | chr4_2:44485632-44485651 | None:intergenic | 25.0% |
| !! | ACGATTTTATCACAAAACTT+TGG | + | chr4_2:44485889-44485908 | Msa0601650:intron | 25.0% |
| ! | TGTATATATGTGTAACATTG+AGG | + | chr4_2:44485958-44485977 | Msa0601650:intron | 25.0% |
| ! | GTATATATGTGTAACATTGA+GGG | + | chr4_2:44485959-44485978 | Msa0601650:intron | 25.0% |
| ! | ACAACTTTAATCTTCAGATT+TGG | - | chr4_2:44486065-44486084 | None:intergenic | 25.0% |
| ! | GCTAAAATTGCAATATTCTA+TGG | + | chr4_2:44486260-44486279 | Msa0601650:intron | 25.0% |
| ! | CATCAAAGAAAACTACAATA+GGG | - | chr4_2:44486295-44486314 | None:intergenic | 25.0% |
| ! | ACATCAAAGAAAACTACAAT+AGG | - | chr4_2:44486296-44486315 | None:intergenic | 25.0% |
| !! | TACATTAAACATTTTGCACT+TGG | - | chr4_2:44486442-44486461 | None:intergenic | 25.0% |
| ! | AATAGGTGACTGTATTATAT+AGG | + | chr4_2:44486509-44486528 | Msa0601650:intron | 25.0% |
| ! | ATAGGTGACTGTATTATATA+GGG | + | chr4_2:44486510-44486529 | Msa0601650:intron | 25.0% |
| ! | TTAACTTCAAATTCCAATGA+AGG | - | chr4_2:44486632-44486651 | None:intergenic | 25.0% |
| ! | ACACCTTCATAAAAATTAGT+TGG | + | chr4_2:44487173-44487192 | Msa0601650:intron | 25.0% |
| !! | ACACCAACTAATTTTTATGA+AGG | - | chr4_2:44487179-44487198 | None:intergenic | 25.0% |
| ! | CTCCTAAGAAAAAAACAAAT+GGG | + | chr4_2:44487804-44487823 | Msa0601650:intron | 25.0% |
| !! | ATTTAGCAATATGGGTTAAT+AGG | + | chr4_2:44487876-44487895 | Msa0601650:intron | 25.0% |
| !!! | TTTTTTCCGACAAATCTATT+TGG | + | chr4_2:44488010-44488029 | Msa0601650:intron | 25.0% |
| ! | ATTTCACCAAATAGATTTGT+CGG | - | chr4_2:44488019-44488038 | None:intergenic | 25.0% |
| !! | TCTATTTGGTGAAATATGAT+TGG | + | chr4_2:44488024-44488043 | Msa0601650:intron | 25.0% |
| !! | ATTAGGTTTGTTCAATTGAA+GGG | - | chr4_2:44488111-44488130 | None:intergenic | 25.0% |
| !! | TATTAGGTTTGTTCAATTGA+AGG | - | chr4_2:44488112-44488131 | None:intergenic | 25.0% |
| ! | ACATTATTCAAATGTAACAC+TGG | - | chr4_2:44488269-44488288 | None:intergenic | 25.0% |
| ! | TTTGTTGAAATGTTATTGAG+TGG | - | chr4_2:44488296-44488315 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTGAGGGATTCAA+TGG | - | chr4_2:44488338-44488357 | None:intergenic | 25.0% |
| ! | CTATTAATGTACAACAGAAT+TGG | + | chr4_2:44488698-44488717 | Msa0601650:intron | 25.0% |
| ! | TATTTGACATTGAGAAAGTA+TGG | + | chr4_2:44488809-44488828 | Msa0601650:CDS | 25.0% |
| !! | ATTTGACATTGAGAAAGTAT+GGG | + | chr4_2:44488810-44488829 | Msa0601650:CDS | 25.0% |
| ! | AATAAAGTGAAAACAACTTC+TGG | + | chr4_2:44489011-44489030 | Msa0601650:three_prime_UTR | 25.0% |
| ! | ATTAGTGCATCTATTTGATT+AGG | + | chr4_2:44489168-44489187 | Msa0601650:three_prime_UTR | 25.0% |
| ! | TTAGTGCATCTATTTGATTA+GGG | + | chr4_2:44489169-44489188 | Msa0601650:three_prime_UTR | 25.0% |
| ! | TGGCTTATTGATATAAAACA+TGG | - | chr4_2:44489212-44489231 | None:intergenic | 25.0% |
| CTCATCACAAATTCATACTA+TGG | + | chr4_2:44482442-44482461 | Msa0601650:CDS | 30.0% | |
| TCTATTACTTTCTTGTTGAG+AGG | - | chr4_2:44482761-44482780 | None:intergenic | 30.0% | |
| TATTCTGCCTCCAAAAATAT+AGG | + | chr4_2:44482786-44482805 | Msa0601650:intron | 30.0% | |
| AGGCAAAAATGGTAATTGAA+AGG | + | chr4_2:44482806-44482825 | Msa0601650:intron | 30.0% | |
| ATTCAGTGAGACCTAAAATA+TGG | + | chr4_2:44482919-44482938 | Msa0601650:intron | 30.0% | |
| TTCTTATAAATAGAACCGGA+GGG | - | chr4_2:44483120-44483139 | None:intergenic | 30.0% | |
| TTTCTTATAAATAGAACCGG+AGG | - | chr4_2:44483119-44483138 | None:intergenic | 30.0% | |
| !! | TTTTCTTTAAAGAGTGCATC+GGG | - | chr4_2:44483182-44483201 | None:intergenic | 30.0% |
| !! | GTTTTCTTTAAAGAGTGCAT+CGG | - | chr4_2:44483183-44483202 | None:intergenic | 30.0% |
| CAGTCAACATCAATACTTTA+AGG | - | chr4_2:44483323-44483342 | None:intergenic | 30.0% | |
| ! | CATATACTCTTTTATATGGG+TGG | + | chr4_2:44483427-44483446 | Msa0601650:CDS | 30.0% |
| GGAATATGAGATAGTATGTT+GGG | - | chr4_2:44483460-44483479 | None:intergenic | 30.0% | |
| ACTTTACGCAATATTTCCTA+TGG | + | chr4_2:44484134-44484153 | Msa0601650:CDS | 30.0% | |
| AAAAAGTTCATACCAGTGAT+AGG | - | chr4_2:44484321-44484340 | None:intergenic | 30.0% | |
| AATTATAATAGTACTCCCTC+CGG | + | chr4_2:44484398-44484417 | Msa0601650:intron | 30.0% | |
| !! | AAACTTATTGTTGGTGTTGT+TGG | + | chr4_2:44484614-44484633 | Msa0601650:intron | 30.0% |
| !!! | TTGTTGGTTTTTTATGACAG+CGG | + | chr4_2:44484630-44484649 | Msa0601650:intron | 30.0% |
| TGAACAATGTTGTCAACATT+GGG | - | chr4_2:44484705-44484724 | None:intergenic | 30.0% | |
| ATGAACAATGTTGTCAACAT+TGG | - | chr4_2:44484706-44484725 | None:intergenic | 30.0% | |
| !!! | CATCGATTTTATGAACAACA+TGG | + | chr4_2:44484768-44484787 | Msa0601650:CDS | 30.0% |
| TATGTGAGATACTTCAATTG+GGG | - | chr4_2:44484841-44484860 | None:intergenic | 30.0% | |
| GTATGTGAGATACTTCAATT+GGG | - | chr4_2:44484842-44484861 | None:intergenic | 30.0% | |
| TGTATGTGAGATACTTCAAT+TGG | - | chr4_2:44484843-44484862 | None:intergenic | 30.0% | |
| !!! | TTTCCAATTATTTTAGGGTG+TGG | + | chr4_2:44484903-44484922 | Msa0601650:intron | 30.0% |
| GTTTGTATTATCTGTTTCAC+CGG | + | chr4_2:44485035-44485054 | Msa0601650:intron | 30.0% | |
| AATGGTACCTCAATTTAATG+TGG | + | chr4_2:44485504-44485523 | Msa0601650:CDS | 30.0% | |
| TAAAAGGCCACATTAAATTG+AGG | - | chr4_2:44485514-44485533 | None:intergenic | 30.0% | |
| ACAAAAAGCAAGAAACCAAA+CGG | - | chr4_2:44485728-44485747 | None:intergenic | 30.0% | |
| GATTGAAGAGACAATAATGA+TGG | + | chr4_2:44485788-44485807 | Msa0601650:CDS | 30.0% | |
| ! | ATAATGATGGCTGATTTAAG+TGG | + | chr4_2:44485801-44485820 | Msa0601650:CDS | 30.0% |
| ATGAAAGAGATGAATTTACC+TGG | - | chr4_2:44485857-44485876 | None:intergenic | 30.0% | |
| ! | ACATTGAGGGTTTTCAAATT+TGG | + | chr4_2:44485972-44485991 | Msa0601650:intron | 30.0% |
| ! | CATTGAGGGTTTTCAAATTT+GGG | + | chr4_2:44485973-44485992 | Msa0601650:intron | 30.0% |
| CTGAAGATTAAAGTTGTAGA+TGG | + | chr4_2:44486068-44486087 | Msa0601650:CDS | 30.0% | |
| CAAGTTTAATAAGGTTGCTT+TGG | + | chr4_2:44486160-44486179 | Msa0601650:CDS | 30.0% | |
| TTTATGCAGCAAAAATGTAC+AGG | + | chr4_2:44486196-44486215 | Msa0601650:CDS | 30.0% | |
| ATGGAGAGTAAATTGCAAAT+AGG | + | chr4_2:44486492-44486511 | Msa0601650:intron | 30.0% | |
| !! | TTAACCTTTGGAGTATTGAT+TGG | - | chr4_2:44486595-44486614 | None:intergenic | 30.0% |
| ! | TTAAATTTGAAATCAGAGGG+AGG | + | chr4_2:44486918-44486937 | Msa0601650:intron | 30.0% |
| CTAAAAGACACCTTCATAAA+AGG | + | chr4_2:44487166-44487185 | Msa0601650:intron | 30.0% | |
| ATCTAACAGATATGGTTAGT+TGG | + | chr4_2:44487478-44487497 | Msa0601650:intron | 30.0% | |
| TTTGGAGGAAAATGAGAAAA+AGG | - | chr4_2:44487559-44487578 | None:intergenic | 30.0% | |
| !! | TTATCATTGATGGTGTATAG+TGG | - | chr4_2:44487606-44487625 | None:intergenic | 30.0% |
| GATAGAACTGTCAAATAAGA+TGG | + | chr4_2:44487759-44487778 | Msa0601650:intron | 30.0% | |
| !!! | TTTTTTTCTTAGGAGCCTTT+CGG | - | chr4_2:44487799-44487818 | None:intergenic | 30.0% |
| GCTCCTAAGAAAAAAACAAA+TGG | + | chr4_2:44487803-44487822 | Msa0601650:intron | 30.0% | |
| !!! | AGCCCATTTGTTTTTTTCTT+AGG | - | chr4_2:44487809-44487828 | None:intergenic | 30.0% |
| ! | AAGCCAACCTATTTCTTATT+GGG | + | chr4_2:44487834-44487853 | Msa0601650:intron | 30.0% |
| !! | TTTGGAGTACTACTTTTACT+CGG | + | chr4_2:44488225-44488244 | Msa0601650:intron | 30.0% |
| ! | TACTTTTACTCGGATGTTTT+GGG | + | chr4_2:44488235-44488254 | Msa0601650:intron | 30.0% |
| TAATTCATGCCTTAGAAAGA+TGG | + | chr4_2:44488761-44488780 | Msa0601650:CDS | 30.0% | |
| ATGAACATTCCATCTTTCTA+AGG | - | chr4_2:44488773-44488792 | None:intergenic | 30.0% | |
| !! | GATTAGTTTGGAATCTTAAG+AGG | - | chr4_2:44488862-44488881 | None:intergenic | 30.0% |
| CAAATAAGTCCTTTAATGAC+AGG | + | chr4_2:44489137-44489156 | Msa0601650:three_prime_UTR | 30.0% | |
| TAACGATAACCTGTCATTAA+AGG | - | chr4_2:44489149-44489168 | None:intergenic | 30.0% | |
| AATAAGCCAAATATTTGCCA+TGG | + | chr4_2:44489223-44489242 | Msa0601650:three_prime_UTR | 30.0% | |
| GAAAAACCATGGCAAATATT+TGG | - | chr4_2:44489232-44489251 | None:intergenic | 30.0% | |
| ACATTGCAAATGAAAAACCA+TGG | - | chr4_2:44489243-44489262 | None:intergenic | 30.0% | |
| AATTGAAAGGTCAATGTACG+TGG | + | chr4_2:44482819-44482838 | Msa0601650:intron | 35.0% | |
| GCTTAAATAAATACTCCCTC+CGG | + | chr4_2:44482985-44483004 | Msa0601650:intron | 35.0% | |
| ! | TTTCTTTAAAGAGTGCATCG+GGG | - | chr4_2:44483181-44483200 | None:intergenic | 35.0% |
| AAAATGCTAACTCGTAGCAA+GGG | - | chr4_2:44483300-44483319 | None:intergenic | 35.0% | |
| TATATGCTATGAGCAATCCA+CGG | - | chr4_2:44483413-44483432 | None:intergenic | 35.0% | |
| GGGAATATGAGATAGTATGT+TGG | - | chr4_2:44483461-44483480 | None:intergenic | 35.0% | |
| GCATTCGGACCAATATATAA+GGG | - | chr4_2:44483481-44483500 | None:intergenic | 35.0% | |
| AGCATTCGGACCAATATATA+AGG | - | chr4_2:44483482-44483501 | None:intergenic | 35.0% | |
| ATATCTGATTGTGCAGCATT+CGG | - | chr4_2:44483496-44483515 | None:intergenic | 35.0% | |
| ! | TTCTTTTCCCTTTAGCAGTT+TGG | - | chr4_2:44483538-44483557 | None:intergenic | 35.0% |
| TTTCATTGTGTGACATTTGC+AGG | + | chr4_2:44484073-44484092 | Msa0601650:intron | 35.0% | |
| TTCATTGTGTGACATTTGCA+GGG | + | chr4_2:44484074-44484093 | Msa0601650:intron | 35.0% | |
| CAGTAGTATAAGAATTCCAC+TGG | - | chr4_2:44484222-44484241 | None:intergenic | 35.0% | |
| CAGTGGAATTCTTATACTAC+TGG | + | chr4_2:44484220-44484239 | Msa0601650:CDS | 35.0% | |
| ! | TTGAAGAATGATGGTGAGAA+TGG | - | chr4_2:44484287-44484306 | None:intergenic | 35.0% |
| CAGTGACAATTGAAGAATGA+TGG | - | chr4_2:44484296-44484315 | None:intergenic | 35.0% | |
| TTCTTATAATAAGGACCGGA+GGG | - | chr4_2:44484533-44484552 | None:intergenic | 35.0% | |
| TTTCTTATAATAAGGACCGG+AGG | - | chr4_2:44484532-44484551 | None:intergenic | 35.0% | |
| TTTCTTATAATAAGGACCGG+AGG | + | chr4_2:44484532-44484551 | Msa0601650:intron | 35.0% | |
| TTCTTATAATAAGGACCGGA+GGG | + | chr4_2:44484533-44484552 | Msa0601650:intron | 35.0% | |
| ! | ACATCCATTTGCTGAAATGT+TGG | + | chr4_2:44484657-44484676 | Msa0601650:CDS | 35.0% |
| TATGCCAACATTTCAGCAAA+TGG | - | chr4_2:44484664-44484683 | None:intergenic | 35.0% | |
| GTTCATGAAAAAATCGTCTG+TGG | + | chr4_2:44484720-44484739 | Msa0601650:CDS | 35.0% | |
| ATGTGAGATACTTCAATTGG+GGG | - | chr4_2:44484840-44484859 | None:intergenic | 35.0% | |
| GTTGTAATGCAAACTTACGA+TGG | - | chr4_2:44484868-44484887 | None:intergenic | 35.0% | |
| TGACTACATTTATGGTACTG+TGG | + | chr4_2:44485331-44485350 | Msa0601650:CDS | 35.0% | |
| GGTACCATTTAGATGTTTGA+GGG | - | chr4_2:44485493-44485512 | None:intergenic | 35.0% | |
| AGGTACCATTTAGATGTTTG+AGG | - | chr4_2:44485494-44485513 | None:intergenic | 35.0% | |
| AGCATAGAGCACATTGTAAA+AGG | - | chr4_2:44485530-44485549 | None:intergenic | 35.0% | |
| !! | GTTGTTGCTTGTTATCCTTA+TGG | - | chr4_2:44485703-44485722 | None:intergenic | 35.0% |
| CAAAAAGCAAGAAACCAAAC+GGG | - | chr4_2:44485727-44485746 | None:intergenic | 35.0% | |
| !! | AAGTCTAGGACTTTTAAACC+AGG | + | chr4_2:44485836-44485855 | Msa0601650:CDS | 35.0% |
| ACTGCGCACTTTATATTGAA+AGG | + | chr4_2:44486036-44486055 | Msa0601650:CDS | 35.0% | |
| TGCTTAACAACATTCCCAAA+GGG | + | chr4_2:44486114-44486133 | Msa0601650:CDS | 35.0% | |
| ! | GCTGCATAAAGCATTAGTAA+TGG | - | chr4_2:44486186-44486205 | None:intergenic | 35.0% |
| ATCACCAATCAATACTCCAA+AGG | + | chr4_2:44486588-44486607 | Msa0601650:CDS | 35.0% | |
| TTGCTAAAAGACACCTTCAT+GGG | - | chr4_2:44487163-44487182 | None:intergenic | 35.0% | |
| ATTGCTAAAAGACACCTTCA+TGG | - | chr4_2:44487103-44487122 | None:intergenic | 35.0% | |
| ! | CTAGAAGACACCTTTTATGA+AGG | - | chr4_2:44487241-44487260 | None:intergenic | 35.0% |
| ! | TATGGTTAGTTGGAGATGAA+TGG | + | chr4_2:44487488-44487507 | Msa0601650:CDS | 35.0% |
| ! | ATGGTTAGTTGGAGATGAAT+GGG | + | chr4_2:44487489-44487508 | Msa0601650:CDS | 35.0% |
| ! | CAACCTTTTCGCATTTTCTT+TGG | - | chr4_2:44487577-44487596 | None:intergenic | 35.0% |
| TCTGTAGGACTTATCATTGA+TGG | - | chr4_2:44487616-44487635 | None:intergenic | 35.0% | |
| AATAAGATGGTCGATCTAAG+AGG | + | chr4_2:44487772-44487791 | Msa0601650:intron | 35.0% | |
| !!! | TTTTTTCTTAGGAGCCTTTC+GGG | - | chr4_2:44487798-44487817 | None:intergenic | 35.0% |
| ! | CAAGCCAACCTATTTCTTAT+TGG | + | chr4_2:44487833-44487852 | Msa0601650:intron | 35.0% |
| CATCCCAATAAGAAATAGGT+TGG | - | chr4_2:44487840-44487859 | None:intergenic | 35.0% | |
| TGTGCATCCCAATAAGAAAT+AGG | - | chr4_2:44487844-44487863 | None:intergenic | 35.0% | |
| !! | CTACTTTTACTCGGATGTTT+TGG | + | chr4_2:44488234-44488253 | Msa0601650:intron | 35.0% |
| AGAAACTACGATTCAATCGA+AGG | + | chr4_2:44488364-44488383 | Msa0601650:intron | 35.0% | |
| ! | AGTTTGGAATCTTAAGAGGT+AGG | - | chr4_2:44488858-44488877 | None:intergenic | 35.0% |
| ! | CCAAACTTGTCTGATTAGTT+TGG | - | chr4_2:44488874-44488893 | None:intergenic | 35.0% |
| CCAAACTAATCAGACAAGTT+TGG | + | chr4_2:44488871-44488890 | Msa0601650:exon | 35.0% | |
| ! | AATGACTTGTCAAACTGCTT+TGG | - | chr4_2:44489100-44489119 | None:intergenic | 35.0% |
| TCATACTATGGCTTCCAAAG+CGG | + | chr4_2:44482454-44482473 | Msa0601650:CDS | 40.0% | |
| ! | TAATTTGTGGAAAGGGTCGA+GGG | - | chr4_2:44482612-44482631 | None:intergenic | 40.0% |
| !! | TTAATTTGTGGAAAGGGTCG+AGG | - | chr4_2:44482613-44482632 | None:intergenic | 40.0% |
| GAAAATGCTAACTCGTAGCA+AGG | - | chr4_2:44483301-44483320 | None:intergenic | 40.0% | |
| ATATGCTATGAGCAATCCAC+GGG | - | chr4_2:44483412-44483431 | None:intergenic | 40.0% | |
| GAATGCTGCACAATCAGATA+TGG | + | chr4_2:44483495-44483514 | Msa0601650:CDS | 40.0% | |
| AAGAATTGTTGACAAAGGCC+TGG | + | chr4_2:44483556-44483575 | Msa0601650:CDS | 40.0% | |
| ! | AATTGGTTTCTCTGTCGACT+TGG | - | chr4_2:44483589-44483608 | None:intergenic | 40.0% |
| AAGTCGACAGAGAAACCAAT+TGG | + | chr4_2:44483588-44483607 | Msa0601650:CDS | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr4_2:44483805-44483824 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr4_2:44483804-44483823 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr4_2:44483804-44483823 | Msa0601650:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | + | chr4_2:44483805-44483824 | Msa0601650:intron | 40.0% | |
| TCCAATACAAATACTCCCTC+CGG | - | chr4_2:44484551-44484570 | None:intergenic | 40.0% | |
| AAGCAGGAGAAGAGTTTCTT+AGG | - | chr4_2:44484817-44484836 | None:intergenic | 40.0% | |
| GCACCACACCCTAAAATAAT+TGG | - | chr4_2:44484909-44484928 | None:intergenic | 40.0% | |
| TTCGGGTGTTCCATCTATAT+AGG | + | chr4_2:44485003-44485022 | Msa0601650:intron | 40.0% | |
| TCGGGTGTTCCATCTATATA+GGG | + | chr4_2:44485004-44485023 | Msa0601650:intron | 40.0% | |
| !! | CTAAAGGTGCCCTATATAGA+TGG | - | chr4_2:44485016-44485035 | None:intergenic | 40.0% |
| CGCTGCATCACACAAAATTT+AGG | + | chr4_2:44485279-44485298 | Msa0601650:CDS | 40.0% | |
| GGCTTCATATGTAGAATCTG+AGG | - | chr4_2:44485363-44485382 | None:intergenic | 40.0% | |
| AGCCTGTTTGAAGAGAAAAG+AGG | + | chr4_2:44485379-44485398 | Msa0601650:CDS | 40.0% | |
| ! | CTCCTCTTTTCTCTTCAAAC+AGG | - | chr4_2:44485384-44485403 | None:intergenic | 40.0% |
| TCCATCTTTCAACTACGCTT+AGG | + | chr4_2:44485446-44485465 | Msa0601650:CDS | 40.0% | |
| CCATCTTTCAACTACGCTTA+GGG | + | chr4_2:44485447-44485466 | Msa0601650:CDS | 40.0% | |
| TTTAGATGTTTGAGGGTTGG+AGG | - | chr4_2:44485486-44485505 | None:intergenic | 40.0% | |
| CCATTTAGATGTTTGAGGGT+TGG | - | chr4_2:44485489-44485508 | None:intergenic | 40.0% | |
| CCAACCCTCAAACATCTAAA+TGG | + | chr4_2:44485486-44485505 | Msa0601650:CDS | 40.0% | |
| ! | ATGCTTGTGACTTGGATTAG+TGG | + | chr4_2:44485545-44485564 | Msa0601650:CDS | 40.0% |
| !! | TGCTTGTGACTTGGATTAGT+GGG | + | chr4_2:44485546-44485565 | Msa0601650:CDS | 40.0% |
| ! | GGCTGATTTAAGTGGAGTAA+AGG | + | chr4_2:44485809-44485828 | Msa0601650:CDS | 40.0% |
| GGAGTAAAGGTGATAAGTCT+AGG | + | chr4_2:44485822-44485841 | Msa0601650:CDS | 40.0% | |
| GTGCTTAACAACATTCCCAA+AGG | + | chr4_2:44486113-44486132 | Msa0601650:CDS | 40.0% | |
| ACTCAGGGGCAAGTTTAATA+AGG | + | chr4_2:44486151-44486170 | Msa0601650:CDS | 40.0% | |
| TGATAGAGCCAATCTTCCAT+TGG | - | chr4_2:44486572-44486591 | None:intergenic | 40.0% | |
| ATGTAAGTGTACACTCGATC+TGG | + | chr4_2:44486772-44486791 | Msa0601650:intron | 40.0% | |
| AAAGAAGAGGAAGCAGTTAG+GGG | - | chr4_2:44487049-44487068 | None:intergenic | 40.0% | |
| CAAAGAAGAGGAAGCAGTTA+GGG | - | chr4_2:44487050-44487069 | None:intergenic | 40.0% | |
| ACAAAGAAGAGGAAGCAGTT+AGG | - | chr4_2:44487051-44487070 | None:intergenic | 40.0% | |
| ! | TTTTAGCAATCCACACCTCA+AGG | + | chr4_2:44487113-44487132 | Msa0601650:intron | 40.0% |
| AAAGTGGAAATCACACCTTG+AGG | - | chr4_2:44487131-44487150 | None:intergenic | 40.0% | |
| ! | CCTTTTCGCATTTTCTTTGG+AGG | - | chr4_2:44487574-44487593 | None:intergenic | 40.0% |
| CCTCCAAAGAAAATGCGAAA+AGG | + | chr4_2:44487571-44487590 | Msa0601650:CDS | 40.0% | |
| TGCAGGTTTATGACTTCTGT+AGG | - | chr4_2:44487631-44487650 | None:intergenic | 40.0% | |
| AGATGGAATGTTCATGAGTG+TGG | + | chr4_2:44488778-44488797 | Msa0601650:CDS | 40.0% | |
| CATACTATGGCTTCCAAAGC+GGG | + | chr4_2:44482455-44482474 | Msa0601650:CDS | 45.0% | |
| GTTTCCAAGGCCAGTTTGTA+AGG | - | chr4_2:44482484-44482503 | None:intergenic | 45.0% | |
| AATTTGTGGAAAGGGTCGAG+GGG | - | chr4_2:44482611-44482630 | None:intergenic | 45.0% | |
| TCACGCTACCAAACTGCTAA+AGG | + | chr4_2:44483527-44483546 | Msa0601650:CDS | 45.0% | |
| CACGCTACCAAACTGCTAAA+GGG | + | chr4_2:44483528-44483547 | Msa0601650:CDS | 45.0% | |
| AGTCTAATTCCTACTCCCTC+CGG | - | chr4_2:44483823-44483842 | None:intergenic | 45.0% | |
| TGTTCTCCACCATGGTAAGT+TGG | - | chr4_2:44484163-44484182 | None:intergenic | 45.0% | |
| ! | TTACCATGGTGGAGAACAGA+TGG | + | chr4_2:44484165-44484184 | Msa0601650:CDS | 45.0% |
| ATTGTCACTGAGCCTATCAC+TGG | + | chr4_2:44484306-44484325 | Msa0601650:intron | 45.0% | |
| TTCTTTAACCAGCAGAGCAC+CGG | - | chr4_2:44484376-44484395 | None:intergenic | 45.0% | |
| !! | ACCGGAGGGAGTATTTGTAT+TGG | + | chr4_2:44484547-44484566 | Msa0601650:intron | 45.0% |
| TCGTCTGTGGTTGCACTTTA+TGG | + | chr4_2:44484733-44484752 | Msa0601650:CDS | 45.0% | |
| ATACTTCAATTGGGGGAAGC+AGG | - | chr4_2:44484833-44484852 | None:intergenic | 45.0% | |
| CCTACATGCAACATCCATGA+GGG | - | chr4_2:44484931-44484950 | None:intergenic | 45.0% | |
| CCTCATGGATGTTGCATGTA+GGG | + | chr4_2:44484929-44484948 | Msa0601650:intron | 45.0% | |
| TGGATGTTGCATGTAGGGTT+TGG | + | chr4_2:44484934-44484953 | Msa0601650:intron | 45.0% | |
| ! | TTGGCTAGGTGTTGTGTGTA+AGG | + | chr4_2:44484953-44484972 | Msa0601650:intron | 45.0% |
| TACTCAAGACGAACAGAGAC+CGG | - | chr4_2:44485057-44485076 | None:intergenic | 45.0% | |
| GTCTCTGTTCGTCTTGAGTA+GGG | + | chr4_2:44485057-44485076 | Msa0601650:intron | 45.0% | |
| AAAAGAGGAGTCACCAGATG+TGG | + | chr4_2:44485394-44485413 | Msa0601650:CDS | 45.0% | |
| TGTGTTAAGTGCACCACATC+TGG | - | chr4_2:44485410-44485429 | None:intergenic | 45.0% | |
| CCCTAAGCGTAGTTGAAAGA+TGG | - | chr4_2:44485450-44485469 | None:intergenic | 45.0% | |
| TGTGCTCTATGCTTGTGACT+TGG | + | chr4_2:44485537-44485556 | Msa0601650:CDS | 45.0% | |
| AAGATCTCAAGCTGCAGTGT+TGG | + | chr4_2:44485600-44485619 | Msa0601650:CDS | 45.0% | |
| AACAAGCAACAACACCCGTT+TGG | + | chr4_2:44485710-44485729 | Msa0601650:intron | 45.0% | |
| ! | AGCACTTGATTCGTCCCTTT+GGG | - | chr4_2:44486131-44486150 | None:intergenic | 45.0% |
| ! | TAGCACTTGATTCGTCCCTT+TGG | - | chr4_2:44486132-44486151 | None:intergenic | 45.0% |
| ! | GACGAATCAAGTGCTACTCA+GGG | + | chr4_2:44486136-44486155 | Msa0601650:CDS | 45.0% |
| ! | ACGAATCAAGTGCTACTCAG+GGG | + | chr4_2:44486137-44486156 | Msa0601650:CDS | 45.0% |
| AGCTGAAAGAGCTTGAACGA+AGG | + | chr4_2:44486536-44486555 | Msa0601650:CDS | 45.0% | |
| GCTGAAAGAGCTTGAACGAA+GGG | + | chr4_2:44486537-44486556 | Msa0601650:CDS | 45.0% | |
| AGCCAATCTTCCATTGGACA+CGG | - | chr4_2:44486566-44486585 | None:intergenic | 45.0% | |
| TGAAATCAGAGGGAGGATTG+TGG | + | chr4_2:44486925-44486944 | Msa0601650:intron | 45.0% | |
| TTGTGGTGCTTCCTCTTACA+AGG | + | chr4_2:44486942-44486961 | Msa0601650:intron | 45.0% | |
| AAACAAGAAAATGGGCCCTC+CGG | - | chr4_2:44486971-44486990 | None:intergenic | 45.0% | |
| TTGCTAGAAGTCACCCATGA+AGG | + | chr4_2:44487086-44487105 | Msa0601650:intron | 45.0% | |
| GAGCAAATGCAAGCATCAGA+AGG | + | chr4_2:44487520-44487539 | Msa0601650:CDS | 45.0% | |
| CATAAACCTGCATTCGTGTG+AGG | + | chr4_2:44487639-44487658 | Msa0601650:CDS | 45.0% | |
| CAAGCACTCATGACTCTTCT+TGG | - | chr4_2:44488727-44488746 | None:intergenic | 45.0% | |
| CAAGAAGAGTCATGAGTGCT+TGG | + | chr4_2:44488725-44488744 | Msa0601650:CDS | 45.0% | |
| TCTTAAGAGGTAGGTAGCCA+TGG | - | chr4_2:44488849-44488868 | None:intergenic | 45.0% | |
| GTTTGTAAGGATGCCCGCTT+TGG | - | chr4_2:44482471-44482490 | None:intergenic | 50.0% | |
| AAGCGGGCATCCTTACAAAC+TGG | + | chr4_2:44482471-44482490 | Msa0601650:CDS | 50.0% | |
| ! | GCATCCTTACAAACTGGCCT+TGG | + | chr4_2:44482477-44482496 | Msa0601650:CDS | 50.0% |
| !! | AACTGGCCTTGGAAACCTCT+TGG | + | chr4_2:44482488-44482507 | Msa0601650:CDS | 50.0% |
| !! | ACTGGCCTTGGAAACCTCTT+GGG | + | chr4_2:44482489-44482508 | Msa0601650:CDS | 50.0% |
| AAGCTCCCAAGAGGTTTCCA+AGG | - | chr4_2:44482497-44482516 | None:intergenic | 50.0% | |
| GAAACCTCTTGGGAGCTTCA+AGG | + | chr4_2:44482499-44482518 | Msa0601650:CDS | 50.0% | |
| ACAACCTTGAAGCTCCCAAG+AGG | - | chr4_2:44482506-44482525 | None:intergenic | 50.0% | |
| AGTTCGTGATTCTAAGCCCG+TGG | + | chr4_2:44483393-44483412 | Msa0601650:intron | 50.0% | |
| !! | TGTCGACTTGGTCGAATTCC+AGG | - | chr4_2:44483577-44483596 | None:intergenic | 50.0% |
| TAATAGTGACCGGAGGGAGT+AGG | + | chr4_2:44483811-44483830 | Msa0601650:intron | 50.0% | |
| ! | CATGGTAAGTTGGCAGCCAT+AGG | - | chr4_2:44484153-44484172 | None:intergenic | 50.0% |
| CTATGGCTGCCAACTTACCA+TGG | + | chr4_2:44484151-44484170 | Msa0601650:CDS | 50.0% | |
| ACACCATCTGTTCTCCACCA+TGG | - | chr4_2:44484171-44484190 | None:intergenic | 50.0% | |
| ! | ATGGTGGAGAACAGATGGTG+TGG | + | chr4_2:44484170-44484189 | Msa0601650:CDS | 50.0% |
| CTTACAGCTCTCTTGCATGC+TGG | + | chr4_2:44484195-44484214 | Msa0601650:CDS | 50.0% | |
| CCCTCATGGATGTTGCATGT+AGG | + | chr4_2:44484928-44484947 | Msa0601650:intron | 50.0% | |
| CCCTACATGCAACATCCATG+AGG | - | chr4_2:44484932-44484951 | None:intergenic | 50.0% | |
| GTTGCATGTAGGGTTTGGCT+AGG | + | chr4_2:44484939-44484958 | Msa0601650:intron | 50.0% | |
| GGTCTCTGTTCGTCTTGAGT+AGG | + | chr4_2:44485056-44485075 | Msa0601650:intron | 50.0% | |
| TGTTTGAGGGTTGGAGGCTA+AGG | - | chr4_2:44485480-44485499 | None:intergenic | 50.0% | |
| ! | GGACGAATCAAGTGCTACTC+AGG | + | chr4_2:44486135-44486154 | Msa0601650:CDS | 50.0% |
| CCAATCTTCCATTGGACACG+GGG | - | chr4_2:44486564-44486583 | None:intergenic | 50.0% | |
| GCCAATCTTCCATTGGACAC+GGG | - | chr4_2:44486565-44486584 | None:intergenic | 50.0% | |
| TGGTGCTTCCTCTTACAAGG+TGG | + | chr4_2:44486945-44486964 | Msa0601650:intron | 50.0% | |
| GGAAATCACACCTTGAGGTG+TGG | - | chr4_2:44487126-44487145 | None:intergenic | 50.0% | |
| AACCTGCATTCGTGTGAGGT+TGG | + | chr4_2:44487643-44487662 | Msa0601650:intron | 50.0% | |
| TACCAACCTCACACGAATGC+AGG | - | chr4_2:44487648-44487667 | None:intergenic | 50.0% | |
| TGGGAAGCAAGTATTCGCCA+TGG | + | chr4_2:44488829-44488848 | Msa0601650:CDS | 50.0% | |
| TGGCTGCCAACTTACCATGG+TGG | + | chr4_2:44484154-44484173 | Msa0601650:CDS | 55.0% | |
| TCTCTTGCATGCTGGACCAG+TGG | + | chr4_2:44484203-44484222 | Msa0601650:CDS | 55.0% | |
| AATGCTAACCGGTGCTCTGC+TGG | + | chr4_2:44484365-44484384 | Msa0601650:intron | 55.0% | |
| ! | TTTAGGGTGTGGTGCCCTCA+TGG | + | chr4_2:44484914-44484933 | Msa0601650:intron | 55.0% |
| CCCCGTGTCCAATGGAAGAT+TGG | + | chr4_2:44486561-44486580 | Msa0601650:CDS | 55.0% | |
| GCTTCCTCTTACAAGGTGGC+CGG | + | chr4_2:44486949-44486968 | Msa0601650:intron | 55.0% | |
| GTCGATCTAAGAGGCCCGAA+AGG | + | chr4_2:44487781-44487800 | Msa0601650:intron | 55.0% | |
| ATGAGTGCTTGGCGCATTGC+TGG | + | chr4_2:44488736-44488755 | Msa0601650:CDS | 55.0% | |
| TCCTCTTACAAGGTGGCCGG+AGG | + | chr4_2:44486952-44486971 | Msa0601650:intron | 60.0% | |
| CCTCTTACAAGGTGGCCGGA+GGG | + | chr4_2:44486953-44486972 | Msa0601650:intron | 60.0% | |
| CGAAGGGTCCCCGTGTCCAA+TGG | + | chr4_2:44486553-44486572 | Msa0601650:CDS | 65.0% | |
| CCCTCCGGCCACCTTGTAAG+AGG | - | chr4_2:44486956-44486975 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 44482432 | 44489325 | 44482432 | ID=Msa0601650;Name=Msa0601650 |
| chr4_2 | mRNA | 44482432 | 44489325 | 44482432 | ID=Msa0601650-mRNA-1;Parent=Msa0601650;Name=Msa0601650-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0.8|0.72|1|0.7|0.63|11|413|604 |
| chr4_2 | exon | 44482432 | 44482520 | 44482432 | ID=Msa0601650-mRNA-1:exon:9820;Parent=Msa0601650-mRNA-1 |
| chr4_2 | exon | 44483409 | 44483609 | 44483409 | ID=Msa0601650-mRNA-1:exon:9821;Parent=Msa0601650-mRNA-1 |
| chr4_2 | exon | 44484095 | 44484279 | 44484095 | ID=Msa0601650-mRNA-1:exon:9822;Parent=Msa0601650-mRNA-1 |
| chr4_2 | exon | 44484650 | 44484869 | 44484650 | ID=Msa0601650-mRNA-1:exon:9823;Parent=Msa0601650-mRNA-1 |
| chr4_2 | exon | 44485271 | 44485646 | 44485271 | ID=Msa0601650-mRNA-1:exon:9824;Parent=Msa0601650-mRNA-1 |
| chr4_2 | exon | 44485750 | 44485857 | 44485750 | ID=Msa0601650-mRNA-1:exon:9825;Parent=Msa0601650-mRNA-1 |
| chr4_2 | exon | 44486017 | 44486217 | 44486017 | ID=Msa0601650-mRNA-1:exon:9826;Parent=Msa0601650-mRNA-1 |
| chr4_2 | exon | 44486514 | 44486609 | 44486514 | ID=Msa0601650-mRNA-1:exon:9827;Parent=Msa0601650-mRNA-1 |
| chr4_2 | exon | 44487487 | 44487660 | 44487487 | ID=Msa0601650-mRNA-1:exon:9828;Parent=Msa0601650-mRNA-1 |
| chr4_2 | exon | 44488715 | 44489080 | 44488715 | ID=Msa0601650-mRNA-1:exon:9829;Parent=Msa0601650-mRNA-1 |
| chr4_2 | exon | 44489114 | 44489325 | 44489114 | ID=Msa0601650-mRNA-1:exon:9830;Parent=Msa0601650-mRNA-1 |
| chr4_2 | CDS | 44482432 | 44482520 | 44482432 | ID=Msa0601650-mRNA-1:cds;Parent=Msa0601650-mRNA-1 |
| chr4_2 | CDS | 44483409 | 44483609 | 44483409 | ID=Msa0601650-mRNA-1:cds;Parent=Msa0601650-mRNA-1 |
| chr4_2 | CDS | 44484095 | 44484279 | 44484095 | ID=Msa0601650-mRNA-1:cds;Parent=Msa0601650-mRNA-1 |
| chr4_2 | CDS | 44484650 | 44484869 | 44484650 | ID=Msa0601650-mRNA-1:cds;Parent=Msa0601650-mRNA-1 |
| chr4_2 | CDS | 44485271 | 44485646 | 44485271 | ID=Msa0601650-mRNA-1:cds;Parent=Msa0601650-mRNA-1 |
| chr4_2 | CDS | 44485750 | 44485857 | 44485750 | ID=Msa0601650-mRNA-1:cds;Parent=Msa0601650-mRNA-1 |
| chr4_2 | CDS | 44486017 | 44486217 | 44486017 | ID=Msa0601650-mRNA-1:cds;Parent=Msa0601650-mRNA-1 |
| chr4_2 | CDS | 44486514 | 44486609 | 44486514 | ID=Msa0601650-mRNA-1:cds;Parent=Msa0601650-mRNA-1 |
| chr4_2 | CDS | 44487487 | 44487660 | 44487487 | ID=Msa0601650-mRNA-1:cds;Parent=Msa0601650-mRNA-1 |
| chr4_2 | CDS | 44488715 | 44488879 | 44488715 | ID=Msa0601650-mRNA-1:cds;Parent=Msa0601650-mRNA-1 |
| chr4_2 | three_prime_UTR | 44488880 | 44489080 | 44488880 | ID=Msa0601650-mRNA-1:three_prime_utr;Parent=Msa0601650-mRNA-1 |
| chr4_2 | three_prime_UTR | 44489114 | 44489325 | 44489114 | ID=Msa0601650-mRNA-1:three_prime_utr;Parent=Msa0601650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
