AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0641900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0641900 MtrunA17_Chr4g0026761 85.714 126 16 1 7 132 475 598 1.15e-76 238
Msa0641900 MtrunA17_Chr7g0256391 78.571 126 25 1 7 132 475 598 3.48e-69 219
Msa0641900 MtrunA17_Chr7g0256411 76.984 126 26 2 7 132 506 628 2.33e-66 212
Msa0641900 MtrunA17_Chr7g0256371 75.969 129 27 2 4 132 481 605 1.08e-65 209
Msa0641900 MtrunA17_Chr4g0026821 84.211 95 13 1 1 95 1 93 4.74e-56 170
Msa0641900 MtrunA17_Chr8g0337081 58.462 130 51 2 4 132 475 602 2.52e-47 160
Msa0641900 MtrunA17_Chr8g0337101 52.344 128 60 1 5 132 513 639 2.77e-43 150
Msa0641900 MtrunA17_Chr4g0026831 100.000 30 0 0 103 132 1 30 6.34e-16 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0641900 AT1G02190.1 54.545 121 47 3 12 126 483 601 5.69e-38 135
Msa0641900 AT1G02190.2 54.545 121 47 3 12 126 479 597 5.85e-38 135
Msa0641900 AT1G02205.5 56.044 91 40 0 38 128 272 362 6.90e-37 129
Msa0641900 AT2G37700.4 64.368 87 31 0 38 124 468 554 2.11e-36 131
Msa0641900 AT2G37700.1 64.368 87 31 0 38 124 496 582 2.54e-36 131
Msa0641900 AT2G37700.3 64.368 87 31 0 38 124 505 591 2.55e-36 131
Msa0641900 AT1G02205.1 56.044 91 40 0 38 128 347 437 3.65e-36 129
Msa0641900 AT1G02205.4 56.044 91 40 0 38 128 512 602 2.76e-35 128
Msa0641900 AT1G02205.2 56.044 91 40 0 38 128 511 601 4.30e-35 127
Msa0641900 AT1G02205.3 56.044 91 40 0 38 128 516 606 5.41e-35 127

Find 118 sgRNAs with CRISPR-Local

Find 672 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTATATATGACTACATTTA+TGG 0.133350 4_3:+42803891 Msa0641900:five_prime_UTR
TTTGGAGGAAAATGAGAAAA+AGG 0.243101 4_3:-42807047 None:intergenic
AAGTAGGAGAAGAGTTTCTT+AGG 0.273284 4_3:-42803381 None:intergenic
ATGAACATTCCATCTTTCTA+AGG 0.305907 4_3:-42810282 None:intergenic
CAAGCACTCATGACTCTTCT+TGG 0.310873 4_3:-42810236 None:intergenic
TGTCGACTTGGTCGAATTCC+AGG 0.311368 4_3:-42802444 None:intergenic
AGCAAAGAGCACATTGTAAA+AGG 0.314692 4_3:-42804095 None:intergenic
CCAACCCTCAAACATCTAAA+TGG 0.316593 4_3:+42804054 Msa0641900:five_prime_UTR
ACAACTTTAATCTTCAGATT+TGG 0.323949 4_3:-42804616 None:intergenic
TCTCATATTCCCTTATATAT+TGG 0.324186 4_3:+42802339 Msa0641900:five_prime_UTR
AGCATTCTGACCAATATATA+AGG 0.332906 4_3:-42802349 None:intergenic
ACTCAGGGGCAAGTTTAATA+AGG 0.340636 4_3:+42804705 Msa0641900:five_prime_UTR
AGCACTTGATTGGTCCCTTT+GGG 0.349623 4_3:-42804682 None:intergenic
CAAGTTTAATAAGGTTGCTT+TGG 0.369770 4_3:+42804714 Msa0641900:five_prime_UTR
CTCATCACAAATTCATACTA+TGG 0.373931 4_3:+42801207 None:intergenic
TAGCACTTGATTGGTCCCTT+TGG 0.383431 4_3:-42804683 None:intergenic
TTAACCTTTGGAGTATTGAT+TGG 0.387155 4_3:-42805379 None:intergenic
ATGAGTGCTTGGCGCATTGC+TGG 0.389012 4_3:+42810248 Msa0641900:CDS
GCCCCTGAGTAGCACTTGAT+TGG 0.390520 4_3:-42804692 None:intergenic
CTGCAGCTTGAGATCTTTGA+AGG 0.394962 4_3:-42804162 None:intergenic
GTTTCCAAGGCCAGTTTGTA+AGG 0.398023 4_3:-42801246 None:intergenic
CGCTGCATCACACAAAATTT+AGG 0.401705 4_3:+42803847 Msa0641900:five_prime_UTR
GAAACCTCTTGGGAGCTTCA+AGG 0.410003 4_3:+42801264 Msa0641900:five_prime_UTR
CCATCTTTCAACTACGCTTA+GGG 0.416116 4_3:+42804015 Msa0641900:five_prime_UTR
CCATAAATGTAGTCATATAT+AGG 0.417569 4_3:-42803891 None:intergenic
TCCATCTTTCAACTACGCTT+AGG 0.422294 4_3:+42804014 Msa0641900:five_prime_UTR
TGAACAATGTTGTCAACATT+GGG 0.427233 4_3:-42803269 None:intergenic
TGTATGTGAGATACTTCAAT+TGG 0.433514 4_3:-42803407 None:intergenic
GCATCCTTACAAACTGGCCT+TGG 0.438647 4_3:+42801242 Msa0641900:five_prime_UTR
CTGAAGATTAAAGTTGTAGA+TGG 0.439460 4_3:+42804622 Msa0641900:five_prime_UTR
TCACGCTACCAAACTGCTAA+AGG 0.439910 4_3:+42802397 Msa0641900:five_prime_UTR
CTTACAGCTCTCTTGCATGC+TGG 0.442026 4_3:+42802914 Msa0641900:five_prime_UTR
CACGCTACCAAACTGCTAAA+GGG 0.443440 4_3:+42802398 Msa0641900:five_prime_UTR
ATGAACAATGTTGTCAACAT+TGG 0.446199 4_3:-42803270 None:intergenic
GTTTGTAAGGATGCCCGCTT+TGG 0.446245 4_3:-42801233 None:intergenic
AACTGGCCTTGGAAACCTCT+TGG 0.451153 4_3:+42801253 Msa0641900:five_prime_UTR
TATGGTTAGTTGGAGATGAA+TGG 0.456856 4_3:+42806979 Msa0641900:CDS
GGACCAATCAAGTGCTACTC+AGG 0.458366 4_3:+42804689 Msa0641900:five_prime_UTR
GAATGCTGCACAATCAGATA+TGG 0.459097 4_3:+42802365 Msa0641900:five_prime_UTR
TGTGTTAAGTGCACCACATC+TGG 0.460275 4_3:-42803975 None:intergenic
TATGCCAACATCTCAGCAAA+TGG 0.460725 4_3:-42803228 None:intergenic
GGAATATGAGATAGTATGTT+GGG 0.461460 4_3:-42802327 None:intergenic
AGGTACCATTTAGATGTTTG+AGG 0.465285 4_3:-42804059 None:intergenic
CGCCGTGTCCAATGGAAGCT+TGG 0.468473 4_3:+42805348 Msa0641900:CDS
CCCTAAGCGTAGTTGAAAGA+TGG 0.468595 4_3:-42804015 None:intergenic
AAGCGGGCATCCTTACAAAC+TGG 0.468776 4_3:+42801236 Msa0641900:five_prime_UTR
ACTGGCCTTGGAAACCTCTT+GGG 0.470484 4_3:+42801254 Msa0641900:five_prime_UTR
CCTCCAAAGAAAATGCGAAA+AGG 0.474183 4_3:+42807062 Msa0641900:CDS
GCAGTAGGACTTATCATTGA+TGG 0.477322 4_3:-42807104 None:intergenic
GGTACCATTTAGATGTTTGA+GGG 0.478371 4_3:-42804058 None:intergenic
CATACTATGGCTTCCAAAGC+GGG 0.482595 4_3:+42801220 Msa0641900:five_prime_UTR
ACCACATCTGGTGATTCCTC+TGG 0.483089 4_3:-42803963 None:intergenic
AATTGGTTTCTCTGTCGACT+TGG 0.483201 4_3:-42802456 None:intergenic
GCATTCTGACCAATATATAA+GGG 0.485123 4_3:-42802348 None:intergenic
ATCTAACAGATATGGTTAGT+TGG 0.485488 4_3:+42806969 Msa0641900:intron
CCATTTAGATGTTTGAGGGT+TGG 0.485770 4_3:-42804054 None:intergenic
TTTAGATGTTTGAGGGTTGG+AGG 0.486191 4_3:-42804051 None:intergenic
TAATTCATGCCTTAGAAAGA+TGG 0.487947 4_3:+42810273 Msa0641900:CDS
CAGTGGAATTCTTATACTAC+TGG 0.491997 4_3:+42802939 Msa0641900:five_prime_UTR
AAGATCTCAAGCTGCAGTGT+TGG 0.498853 4_3:+42804168 Msa0641900:five_prime_UTR
TACCAACCTCACACGAATGC+AGG 0.499945 4_3:-42807136 None:intergenic
ATGGTTAGTTGGAGATGAAT+GGG 0.501106 4_3:+42806980 Msa0641900:CDS
ATACTTCAATTGGGGAAAGT+AGG 0.503664 4_3:-42803397 None:intergenic
GGGAATATGAGATAGTATGT+TGG 0.504673 4_3:-42802328 None:intergenic
TAAAAGGCCACATTAAATTG+AGG 0.505608 4_3:-42804079 None:intergenic
TCGTCTGTGGCTGCACTGTA+TGG 0.507693 4_3:+42803300 Msa0641900:five_prime_UTR
TGATAGAGCCAAGCTTCCAT+TGG 0.508550 4_3:-42805356 None:intergenic
AAGAATTGTTGACAAAGGCC+TGG 0.510050 4_3:+42802426 Msa0641900:five_prime_UTR
CAAGAAGAGTCATGAGTGCT+TGG 0.516934 4_3:+42810237 Msa0641900:CDS
CTATGCTTGCCAACTTACCA+TGG 0.517109 4_3:+42802870 Msa0641900:five_prime_UTR
GCTGCATAAAGCATTAGTAA+TGG 0.517218 4_3:-42804737 None:intergenic
ACTGCGCACTTTATATTGAA+AGG 0.517488 4_3:+42804590 Msa0641900:five_prime_UTR
CGAAGGGTCGCCGTGTCCAA+TGG 0.521226 4_3:+42805340 Msa0641900:CDS
TTGAAGAATGATGGTGAGAA+TGG 0.522722 4_3:-42803003 None:intergenic
TGTTCTCCACCATGGTAAGT+TGG 0.524211 4_3:-42802879 None:intergenic
GGAGTAAAGGTGATAAGTCT+AGG 0.524556 4_3:+42804379 Msa0641900:five_prime_UTR
AGCTGAAAGAGCTTGAACGA+AGG 0.524659 4_3:+42805323 Msa0641900:CDS
GGAGTTACTTTCTAAAACAA+AGG 0.526320 4_3:-42804141 None:intergenic
TTATCATTGATGGTGTATAG+TGG 0.546801 4_3:-42807094 None:intergenic
GTATGTGAGATACTTCAATT+GGG 0.552660 4_3:-42803406 None:intergenic
AAGTCGACAGAGAAACCAAT+TGG 0.553427 4_3:+42802458 Msa0641900:five_prime_UTR
TGCTTAACAACATTCCCAAA+GGG 0.556459 4_3:+42804668 Msa0641900:five_prime_UTR
ATTGTCACTGAGCCTATCAC+TGG 0.557450 4_3:+42803025 Msa0641900:five_prime_UTR
GGCTGATTTAAGTGGAGTAA+AGG 0.558217 4_3:+42804366 Msa0641900:five_prime_UTR
GCTGAAAGAGCTTGAACGAA+GGG 0.563864 4_3:+42805324 Msa0641900:CDS
ACATCCATTTGCTGAGATGT+TGG 0.565861 4_3:+42803224 Msa0641900:five_prime_UTR
AGCTTCATATGTAGCATCTG+AGG 0.581755 4_3:-42803928 None:intergenic
AAGCTCCCAAGAGGTTTCCA+AGG 0.582916 4_3:-42801259 None:intergenic
CAGTGACAATTGAAGAATGA+TGG 0.584374 4_3:-42803012 None:intergenic
CAGTAGTATAAGAATTCCAC+TGG 0.586940 4_3:-42802938 None:intergenic
GACCAATCAAGTGCTACTCA+GGG 0.596465 4_3:+42804690 Msa0641900:five_prime_UTR
GAGCAAATGCAAGCATCAGA+AGG 0.600767 4_3:+42807011 Msa0641900:CDS
AATGGTACCTCAATTTAATG+TGG 0.603244 4_3:+42804072 Msa0641900:five_prime_UTR
AGTTCGTGATTCTAAGCCCG+TGG 0.603498 4_3:+42802263 Msa0641900:intron
ATAATGATGGCTGATTTAAG+TGG 0.604119 4_3:+42804358 Msa0641900:five_prime_UTR
TCTCTTGCATGCTGGACCAG+TGG 0.604144 4_3:+42802922 Msa0641900:five_prime_UTR
ATATGCTACGAGCAATCCAC+GGG 0.604642 4_3:-42802279 None:intergenic
CATGGTAAGTTGGCAAGCAT+AGG 0.606419 4_3:-42802869 None:intergenic
TATATGCTACGAGCAATCCA+CGG 0.612352 4_3:-42802280 None:intergenic
ATCACCAATCAATACTCCAA+AGG 0.614842 4_3:+42805375 Msa0641900:CDS
GATTGAAGAGACAATAATGA+TGG 0.615276 4_3:+42804345 Msa0641900:five_prime_UTR
TTACCATGGTGGAGAACAGA+TGG 0.618214 4_3:+42802884 Msa0641900:five_prime_UTR
TGCAGGTTTATGACTGCAGT+AGG 0.623460 4_3:-42807119 None:intergenic
AGATGGAATGTTCATGAGTG+TGG 0.624003 4_3:+42810290 Msa0641900:CDS
ACCAGAGGAATCACCAGATG+TGG 0.626932 4_3:+42803962 Msa0641900:five_prime_UTR
AAAAGAAGAATTGTTGACAA+AGG 0.629736 4_3:+42802421 Msa0641900:five_prime_UTR
CATAAACCTGCATTCGTGTG+AGG 0.635395 4_3:+42807130 Msa0641900:CDS
GTGCTTAACAACATTCCCAA+AGG 0.636164 4_3:+42804667 Msa0641900:five_prime_UTR
AGCCAAGCTTCCATTGGACA+CGG 0.637109 4_3:-42805350 None:intergenic
TCATACTATGGCTTCCAAAG+CGG 0.640747 4_3:+42801219 Msa0641900:five_prime_UTR
ACAACCTTGAAGCTCCCAAG+AGG 0.664103 4_3:-42801268 None:intergenic
ACACCATCTGTTCTCCACCA+TGG 0.679185 4_3:-42802887 None:intergenic
TGACTACATTTATGGTACTG+TGG 0.682689 4_3:+42803899 Msa0641900:five_prime_UTR
TGCTTGCCAACTTACCATGG+TGG 0.691063 4_3:+42802873 Msa0641900:five_prime_UTR
ACCAATCAAGTGCTACTCAG+GGG 0.695886 4_3:+42804691 Msa0641900:five_prime_UTR
ATGGTGGAGAACAGATGGTG+TGG 0.733193 4_3:+42802889 Msa0641900:five_prime_UTR
TATGTGAGATACTTCAATTG+GGG 0.758215 4_3:-42803405 None:intergenic
AGCTTGTGTGAAGAGACCAG+AGG 0.773132 4_3:+42803947 Msa0641900:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAAAATAAAAAAAT+AGG - chr4_3:42804847-42804866 None:intergenic 0.0%
!! AATTAAAAAAAATTAAAAAT+GGG - chr4_3:42807866-42807885 None:intergenic 0.0%
!! TAATTAAAAAAAATTAAAAA+TGG - chr4_3:42807867-42807886 None:intergenic 0.0%
!!! TATTTGCTTATATTTTATTT+TGG - chr4_3:42801614-42801633 None:intergenic 10.0%
!! TCTATATATCTATAAATAAA+GGG - chr4_3:42803063-42803082 None:intergenic 10.0%
!! TTCTATATATCTATAAATAA+AGG - chr4_3:42803064-42803083 None:intergenic 10.0%
!! AATTATAATAGTATTTGTAT+TGG + chr4_3:42803124-42803143 Msa0641900:intron 10.0%
!!! ATTTTTCTTAATAGAATTTT+TGG - chr4_3:42805146-42805165 None:intergenic 10.0%
!!! AAAGTTTAATTTTATTCTAA+TGG + chr4_3:42805260-42805279 Msa0641900:intron 10.0%
!!! TTCTTTTGTTTTTTTTTTTT+TGG + chr4_3:42805816-42805835 Msa0641900:intron 10.0%
!!! GATTAATTTTTCAAATTTAT+TGG + chr4_3:42805887-42805906 Msa0641900:intron 10.0%
!!! TTGATTTTTAAATTTTTTTG+TGG + chr4_3:42807931-42807950 Msa0641900:intron 10.0%
!!! CATTTAATCTTTTTTTTTTT+GGG + chr4_3:42808702-42808721 Msa0641900:intron 10.0%
!! TTAAAAGTTTATAAGTTATT+AGG - chr4_3:42808906-42808925 None:intergenic 10.0%
!!! ACTAAATCAAATTTAAAATT+TGG - chr4_3:42808948-42808967 None:intergenic 10.0%
!! AAAAAAAAATTCAAATTACA+AGG - chr4_3:42809259-42809278 None:intergenic 10.0%
!! AAATCAAAAAAAAATTTACA+GGG - chr4_3:42809619-42809638 None:intergenic 10.0%
!! TAAATCAAAAAAAAATTTAC+AGG - chr4_3:42809620-42809639 None:intergenic 10.0%
!! ATCCAAAAAAAAAAAATTAT+AGG + chr4_3:42809781-42809800 Msa0641900:intron 10.0%
!! TCCAAAAAAAAAAAATTATA+GGG + chr4_3:42809782-42809801 Msa0641900:intron 10.0%
!! TTAATATAAACATTAATTTC+GGG + chr4_3:42809862-42809881 Msa0641900:intron 10.0%
!! TCACTTTAATAAAAAACTAA+AGG - chr4_3:42801486-42801505 None:intergenic 15.0%
!!! TTTTTATTAAAGTGAATGTT+AGG + chr4_3:42801491-42801510 Msa0641900:intron 15.0%
!! GAAAAATTATGGTAATTTAT+CGG - chr4_3:42801910-42801929 None:intergenic 15.0%
!! TAAAAAATTCTTGAAACTTA+CGG - chr4_3:42802131-42802150 None:intergenic 15.0%
!! TAGCACTTATTTAATTAATT+AGG - chr4_3:42802522-42802541 None:intergenic 15.0%
!! ATAAGTGCTATATAATTAAT+AGG + chr4_3:42802532-42802551 Msa0641900:intron 15.0%
!! CTATATAATTAATAGGAATT+AGG + chr4_3:42802539-42802558 Msa0641900:intron 15.0%
!!! TTAATTGTTCCAATTATTTT+AGG + chr4_3:42803464-42803483 Msa0641900:intron 15.0%
!!! TAATTGTTCCAATTATTTTA+GGG + chr4_3:42803465-42803484 Msa0641900:intron 15.0%
!!! AGGGTTTTTTTTTTTTTTTA+TGG + chr4_3:42803541-42803560 Msa0641900:intron 15.0%
!!! TTTTTTATGGTGTTTATTTT+CGG + chr4_3:42803554-42803573 Msa0641900:intron 15.0%
!!! TTCTTTATTGCATATTTTTA+TGG + chr4_3:42803762-42803781 Msa0641900:intron 15.0%
!! TAAAACAATAAATTAACCTT+TGG - chr4_3:42805394-42805413 None:intergenic 15.0%
!! AAATTAGTAGTATTAATTAG+GGG - chr4_3:42805594-42805613 None:intergenic 15.0%
!! CAAATTAGTAGTATTAATTA+GGG - chr4_3:42805595-42805614 None:intergenic 15.0%
!! ACAAATTAGTAGTATTAATT+AGG - chr4_3:42805596-42805615 None:intergenic 15.0%
!!! CATAAAATAGACTTTTAAAT+AGG - chr4_3:42806176-42806195 None:intergenic 15.0%
!! AACTTCAAAAATATCAATAA+TGG + chr4_3:42806369-42806388 Msa0641900:intron 15.0%
!! ATATATATATAACAAAGAAG+AGG - chr4_3:42806804-42806823 None:intergenic 15.0%
!!! CTCAACTTTTATTAATTATA+GGG - chr4_3:42807198-42807217 None:intergenic 15.0%
!!! TCTCAACTTTTATTAATTAT+AGG - chr4_3:42807199-42807218 None:intergenic 15.0%
!!! TGAATTTTTTCTGATTTTTT+GGG - chr4_3:42807770-42807789 None:intergenic 15.0%
!!! TTGAATTTTTTCTGATTTTT+TGG - chr4_3:42807771-42807790 None:intergenic 15.0%
!! AAAAAATCAGAAAAAATTCA+AGG + chr4_3:42807770-42807789 Msa0641900:intron 15.0%
!!! TTTTTATGATTTTATTTGAC+AGG + chr4_3:42807964-42807983 Msa0641900:intron 15.0%
!! GATTATACATAATAATTGTT+TGG + chr4_3:42808070-42808089 Msa0641900:intron 15.0%
!! GAAAACTAAAATAAACATAA+GGG - chr4_3:42808437-42808456 None:intergenic 15.0%
!! TGAAAACTAAAATAAACATA+AGG - chr4_3:42808436-42808455 None:intergenic 15.0%
!! GAAAACTAAAATAAACATAA+GGG - chr4_3:42808437-42808456 None:intergenic 15.0%
!! TGAAAACTAAAATAAACATA+AGG - chr4_3:42808436-42808455 None:intergenic 15.0%
!! GAAAACTAAAATAAACATAA+GGG - chr4_3:42808437-42808456 None:intergenic 15.0%
!! TGAAAACTAAAATAAACATA+AGG - chr4_3:42808436-42808455 None:intergenic 15.0%
!! TGAAAACTAAAATAAACATA+AGG + chr4_3:42808436-42808455 Msa0641900:intron 15.0%
!! GAAAACTAAAATAAACATAA+GGG + chr4_3:42808437-42808456 Msa0641900:intron 15.0%
!! TGAAAACTAAAATAAACATA+AGG + chr4_3:42808436-42808455 Msa0641900:intron 15.0%
!! GAAAACTAAAATAAACATAA+GGG + chr4_3:42808437-42808456 Msa0641900:intron 15.0%
!! TGAAAACTAAAATAAACATA+AGG + chr4_3:42808436-42808455 Msa0641900:intron 15.0%
!! GAAAACTAAAATAAACATAA+GGG + chr4_3:42808437-42808456 Msa0641900:intron 15.0%
!! CCAAAAAAAAAAAGATTAAA+TGG - chr4_3:42808704-42808723 None:intergenic 15.0%
!!! CCATTTAATCTTTTTTTTTT+TGG + chr4_3:42808701-42808720 Msa0641900:intron 15.0%
!! ATTATTCATAGTTATCTATT+TGG + chr4_3:42808767-42808786 Msa0641900:intron 15.0%
!! ACATTATTCAAATATTACAT+TGG - chr4_3:42809083-42809102 None:intergenic 15.0%
!!! TCCAAAAATAATATTTTACA+GGG - chr4_3:42809230-42809249 None:intergenic 15.0%
!!! ATCCAAAAATAATATTTTAC+AGG - chr4_3:42809231-42809250 None:intergenic 15.0%
!!! CCTTAATTATATTTAAGATA+GGG - chr4_3:42809548-42809567 None:intergenic 15.0%
!! CCTATCTTAAATATAATTAA+GGG + chr4_3:42809546-42809565 Msa0641900:intron 15.0%
!! AAATATAATTAAGGGTTAAT+AGG + chr4_3:42809554-42809573 Msa0641900:intron 15.0%
!! AATCAAAAAAAAATTTACAG+GGG - chr4_3:42809618-42809637 None:intergenic 15.0%
!!! AAAACAAATTTTTTTTACAG+GGG - chr4_3:42809754-42809773 None:intergenic 15.0%
!!! CAAAACAAATTTTTTTTACA+GGG - chr4_3:42809753-42809772 None:intergenic 15.0%
!!! TCAAAACAAATTTTTTTTAC+AGG - chr4_3:42809752-42809771 None:intergenic 15.0%
!!! AAGAAATTTTCATTTTTGTT+TGG - chr4_3:42809686-42809705 None:intergenic 15.0%
!!! TCAAAACAAATTTTTTTTAC+AGG + chr4_3:42809752-42809771 Msa0641900:intron 15.0%
!!! CAAAACAAATTTTTTTTACA+GGG + chr4_3:42809753-42809772 Msa0641900:intron 15.0%
!!! AAAACAAATTTTTTTTACAG+GGG + chr4_3:42809754-42809773 Msa0641900:intron 15.0%
!! CCAAAAAAAAAAAATTATAG+GGG + chr4_3:42809783-42809802 Msa0641900:intron 15.0%
!! CAAAAAAAAAAAATTATAGG+GGG + chr4_3:42809784-42809803 Msa0641900:intron 15.0%
!!! CATAAATTAATTTGTGGAAA+GGG - chr4_3:42801384-42801403 None:intergenic 20.0%
!!! ACATAAATTAATTTGTGGAA+AGG - chr4_3:42801385-42801404 None:intergenic 20.0%
!!! TTGACACATAAATTAATTTG+TGG - chr4_3:42801390-42801409 None:intergenic 20.0%
!!! TGACATATTGTTGTTATAAT+TGG - chr4_3:42801419-42801438 None:intergenic 20.0%
!!! TGCTTATATTTTATTTTGGA+GGG - chr4_3:42801610-42801629 None:intergenic 20.0%
!!! TTGCTTATATTTTATTTTGG+AGG - chr4_3:42801611-42801630 None:intergenic 20.0%
!!! CTATCACTTATATTTCATTT+TGG - chr4_3:42801643-42801662 None:intergenic 20.0%
!! AAATATAAGTGATAGTTGAA+AGG + chr4_3:42801648-42801667 Msa0641900:intron 20.0%
!! CAAAAATCAATAAACATTAG+CGG + chr4_3:42801798-42801817 Msa0641900:intron 20.0%
!!! TAAATTTCCTAGTTTTTTCT+AGG - chr4_3:42801941-42801960 None:intergenic 20.0%
!!! TAGCATATACACTTTTATAT+GGG + chr4_3:42802294-42802313 Msa0641900:five_prime_UTR 20.0%
!! ATTGAAATTTATGAACCAAT+TGG - chr4_3:42802476-42802495 None:intergenic 20.0%
!!! TAATTGTGTATGATTTGTTA+TGG + chr4_3:42802614-42802633 Msa0641900:intron 20.0%
!! GATATATAGAAAATGTTAAC+CGG + chr4_3:42803073-42803092 Msa0641900:intron 20.0%
!! ACAATAAGTTTCTTATATCA+GGG - chr4_3:42803181-42803200 None:intergenic 20.0%
!! AACAATAAGTTTCTTATATC+AGG - chr4_3:42803182-42803201 None:intergenic 20.0%
!! TGATATAAGAAACTTATTGT+TGG + chr4_3:42803181-42803200 Msa0641900:intron 20.0%
!!! AATTGTTCCAATTATTTTAG+GGG + chr4_3:42803466-42803485 Msa0641900:intron 20.0%
!!! TTTTTATGGTGTTTATTTTC+GGG + chr4_3:42803555-42803574 Msa0641900:intron 20.0%
!! AAACAGATAATACAAACTAA+AGG - chr4_3:42803601-42803620 None:intergenic 20.0%
!!! TTTTATTCTCTATATCCATA+AGG + chr4_3:42804242-42804261 Msa0641900:intron 20.0%
!! AACATTCATAGAATAATCAA+AGG - chr4_3:42804808-42804827 None:intergenic 20.0%
!! ATTTGTATTCTCTATTTCAT+CGG - chr4_3:42804919-42804938 None:intergenic 20.0%
!!! TACAATAAACATTTTGTACT+TGG - chr4_3:42805229-42805248 None:intergenic 20.0%
!!! TTATTGTTTTAATCCTTCAT+TGG + chr4_3:42805403-42805422 Msa0641900:intron 20.0%
!! GGACAAAAATAAAATCAAAT+GGG - chr4_3:42805511-42805530 None:intergenic 20.0%
!!! TTCTTTAAATTTGAAATCAG+AGG + chr4_3:42805988-42806007 Msa0641900:intron 20.0%
!!! TCTTTAAATTTGAAATCAGA+GGG + chr4_3:42805989-42806008 Msa0641900:intron 20.0%
!! AAACACAAAAACAAGAAAAT+GGG - chr4_3:42806637-42806656 None:intergenic 20.0%
!! AAAACACAAAAACAAGAAAA+TGG - chr4_3:42806638-42806657 None:intergenic 20.0%
!! TGTTAGAAATATGAAGTAAT+AGG - chr4_3:42806943-42806962 None:intergenic 20.0%
!! CATTATAAATCTAACAGATA+TGG + chr4_3:42806961-42806980 Msa0641900:intron 20.0%
!! AAAGTAATACTCTAACAAAT+AGG - chr4_3:42807335-42807354 None:intergenic 20.0%
!! AATCTGAAAACTTCAAAAAT+AGG + chr4_3:42807492-42807511 Msa0641900:intron 20.0%
!! ATCTGAAAACTTCAAAAATA+GGG + chr4_3:42807493-42807512 Msa0641900:intron 20.0%
!!! TTTTTCAAGGTAAAATTGTT+CGG + chr4_3:42807568-42807587 Msa0641900:intron 20.0%
!! GATTAATATTATCCCTAAAA+TGG - chr4_3:42807651-42807670 None:intergenic 20.0%
!!! GAATTTTTTCTGATTTTTTG+GGG - chr4_3:42807769-42807788 None:intergenic 20.0%
!!! AAAACTAGTGCAAAATTTTT+CGG - chr4_3:42807909-42807928 None:intergenic 20.0%
!!! GTTTATTTTAGTTTTCAAGT+TGG + chr4_3:42808209-42808228 Msa0641900:intron 20.0%
!! TTGAAACTTTCAAAACATAA+GGG - chr4_3:42808236-42808255 None:intergenic 20.0%
!! GAAAACTAAAATAAACGTAT+GGG - chr4_3:42808265-42808284 None:intergenic 20.0%
!! TGAAAACTAAAATAAACGTA+TGG - chr4_3:42808266-42808285 None:intergenic 20.0%
!!! GTTTATTTTAGTTTTCAAGT+TGG + chr4_3:42808209-42808228 Msa0641900:intron 20.0%
!!! GTTTATTTTAGTTTTCAAGT+TGG + chr4_3:42808209-42808228 Msa0641900:intron 20.0%
!! GAAAACTAAAATAAACACAA+GGG - chr4_3:42808356-42808375 None:intergenic 20.0%
!! TGAAAACTAAAATAAACACA+AGG - chr4_3:42808357-42808376 None:intergenic 20.0%
!!! GTTTATTTTAGTTTTCAAGT+TGG + chr4_3:42808209-42808228 Msa0641900:intron 20.0%
!!! GTTTATTTTAGTTTTCAAGT+TGG + chr4_3:42808209-42808228 Msa0641900:intron 20.0%
!!! GTTTATTTTAGTTTTCAAGT+CGG - chr4_3:42808209-42808228 None:intergenic 20.0%
!!! GTTTATTTTAGTTTTCAAGT+TGG - chr4_3:42808209-42808228 None:intergenic 20.0%
!!! TTGAAAACTTTTAAAACGTA+AGG + chr4_3:42808526-42808545 Msa0641900:intron 20.0%
!!! TGAAAACTTTTAAAACGTAA+GGG + chr4_3:42808527-42808546 Msa0641900:intron 20.0%
!!! GTTTATTTTAGTTTTCAAGT+TGG - chr4_3:42808209-42808228 None:intergenic 20.0%
!!! TGAAGTTTAATTTAGCAATA+TGG + chr4_3:42808659-42808678 Msa0641900:intron 20.0%
!!! GAAGTTTAATTTAGCAATAT+GGG + chr4_3:42808660-42808679 Msa0641900:intron 20.0%
!!! TTTTTTTCGACAAATATGAT+TGG + chr4_3:42808802-42808821 Msa0641900:intron 20.0%
!! ACAACTTGAATTTAATTGAT+AGG - chr4_3:42808864-42808883 None:intergenic 20.0%
!!! ATTAAATTGTTGACTTGATT+TGG + chr4_3:42808985-42809004 Msa0641900:intron 20.0%
!!! TTAAATTGTTGACTTGATTT+GGG + chr4_3:42808986-42809005 Msa0641900:intron 20.0%
!!! TTTTTTACTGTTTCAGAAAA+AGG + chr4_3:42809046-42809065 Msa0641900:intron 20.0%
!!! AAAAATAATATTTTACAGGG+GGG - chr4_3:42809227-42809246 None:intergenic 20.0%
!!! CAAAAATAATATTTTACAGG+GGG - chr4_3:42809228-42809247 None:intergenic 20.0%
!!! CCAAAAATAATATTTTACAG+GGG - chr4_3:42809229-42809248 None:intergenic 20.0%
!! AAAAATTCAAATTACAAGGA+CGG - chr4_3:42809255-42809274 None:intergenic 20.0%
!!! AAATTTTCTCAAATTAACAG+GGG - chr4_3:42809369-42809388 None:intergenic 20.0%
!!! GAAATTTTCTCAAATTAACA+GGG - chr4_3:42809370-42809389 None:intergenic 20.0%
!!! CTGTTAATTTGAGAAAATTT+CGG + chr4_3:42809369-42809388 Msa0641900:intron 20.0%
!! TGTACAGTCAAAATTAATAA+AGG + chr4_3:42809418-42809437 Msa0641900:intron 20.0%
!!! AATTTGAAGTTTTTTGGTTT+TGG - chr4_3:42809445-42809464 None:intergenic 20.0%
!!! ATCCAAAAAGAAAATTTTAC+AGG + chr4_3:42809476-42809495 Msa0641900:intron 20.0%
!!! TCCAAAAAGAAAATTTTACA+GGG + chr4_3:42809477-42809496 Msa0641900:intron 20.0%
!! CCCTATCTTAAATATAATTA+AGG + chr4_3:42809545-42809564 Msa0641900:intron 20.0%
!!! CCCTTAATTATATTTAAGAT+AGG - chr4_3:42809549-42809568 None:intergenic 20.0%
!! ATCAAAAAAAAATTTACAGG+GGG - chr4_3:42809617-42809636 None:intergenic 20.0%
!!! AAACAAATTTTTTTTACAGG+GGG + chr4_3:42809755-42809774 Msa0641900:intron 20.0%
!!! CCCCTATAATTTTTTTTTTT+TGG - chr4_3:42809786-42809805 None:intergenic 20.0%
!!! AATGTAATATAGGTCATTTT+CGG - chr4_3:42809815-42809834 None:intergenic 20.0%
!! AAAATGACCTATATTACATT+GGG + chr4_3:42809815-42809834 Msa0641900:intron 20.0%
!! TATCAAAATTAATGTCTTAC+TGG + chr4_3:42810040-42810059 Msa0641900:intron 20.0%
!! CACTTATATTTCATTTTGGA+GGG - chr4_3:42801639-42801658 None:intergenic 25.0%
!! TCACTTATATTTCATTTTGG+AGG - chr4_3:42801640-42801659 None:intergenic 25.0%
!! CTAGAATTCTTCTGTATTTT+AGG - chr4_3:42801768-42801787 None:intergenic 25.0%
! CTAAAATACAGAAGAATTCT+AGG + chr4_3:42801766-42801785 Msa0641900:intron 25.0%
!!! TAGAGTAAGAATTAGTTTTG+TGG + chr4_3:42801839-42801858 Msa0641900:intron 25.0%
!!! AGAGTAAGAATTAGTTTTGT+GGG + chr4_3:42801840-42801859 Msa0641900:intron 25.0%
! AGGCTATTCTTGAAAAATTA+TGG - chr4_3:42801921-42801940 None:intergenic 25.0%
! AACTACACTAATCAGTTATA+AGG - chr4_3:42801979-42801998 None:intergenic 25.0%
! AAATGCTAACTAGTAAACAA+GGG - chr4_3:42802170-42802189 None:intergenic 25.0%
! AAAATGCTAACTAGTAAACA+AGG - chr4_3:42802171-42802190 None:intergenic 25.0%
!! GTAGCATATACACTTTTATA+TGG + chr4_3:42802293-42802312 Msa0641900:five_prime_UTR 25.0%
! TCTCATATTCCCTTATATAT+TGG + chr4_3:42802339-42802358 Msa0641900:five_prime_UTR 25.0%
! AAAAGAAGAATTGTTGACAA+AGG + chr4_3:42802421-42802440 Msa0641900:five_prime_UTR 25.0%
! GGTTTACGAAAAATGTATAA+AGG - chr4_3:42803160-42803179 None:intergenic 25.0%
!!! ATCGATTTTATGAACAACAT+GGG + chr4_3:42803336-42803355 Msa0641900:five_prime_UTR 25.0%
!!! CATACAAAGTTTGATTTTAC+AGG + chr4_3:42803817-42803836 Msa0641900:intron 25.0%
! CCATAAATGTAGTCATATAT+AGG - chr4_3:42803894-42803913 None:intergenic 25.0%
! CCTATATATGACTACATTTA+TGG + chr4_3:42803891-42803910 Msa0641900:five_prime_UTR 25.0%
!!! CATACTTGTGTTTTAAATCT+TGG - chr4_3:42804200-42804219 None:intergenic 25.0%
!! ACGATTTTATCACAAAACTT+TGG + chr4_3:42804445-42804464 Msa0641900:intron 25.0%
! TGTATATATGTGTAACATTG+AGG + chr4_3:42804512-42804531 Msa0641900:intron 25.0%
! GTATATATGTGTAACATTGA+GGG + chr4_3:42804513-42804532 Msa0641900:intron 25.0%
! ACAACTTTAATCTTCAGATT+TGG - chr4_3:42804619-42804638 None:intergenic 25.0%
! AAATTAAAGAAGCCGTAAAT+AGG + chr4_3:42804935-42804954 Msa0641900:intron 25.0%
!!! GTTTTTAGGGTGTTTATTTT+TGG - chr4_3:42804969-42804988 None:intergenic 25.0%
! ATCAAAGGAAAATACAATAG+GGG - chr4_3:42805031-42805050 None:intergenic 25.0%
! GATCAAAGGAAAATACAATA+GGG - chr4_3:42805032-42805051 None:intergenic 25.0%
! AACCATCTAACTGAATTAAA+TGG + chr4_3:42805092-42805111 Msa0641900:intron 25.0%
! ACCATCTAACTGAATTAAAT+GGG + chr4_3:42805093-42805112 Msa0641900:intron 25.0%
! AATAGGTGACTGTATTATAT+AGG + chr4_3:42805296-42805315 Msa0641900:intron 25.0%
! ATAGGTGACTGTATTATATA+GGG + chr4_3:42805297-42805316 Msa0641900:intron 25.0%
! TTAACTTCAAATTCCAATGA+AGG - chr4_3:42805419-42805438 None:intergenic 25.0%
! GGGACAAAAATAAAATCAAA+TGG - chr4_3:42805512-42805531 None:intergenic 25.0%
! TGAAAAGGAGTTTACATTTA+GGG - chr4_3:42805532-42805551 None:intergenic 25.0%
! TTGAAAAGGAGTTTACATTT+AGG - chr4_3:42805533-42805552 None:intergenic 25.0%
! ATGCATCTAGTAATTTGAAA+AGG - chr4_3:42805547-42805566 None:intergenic 25.0%
!! TATTAATTAGGGGTATGTTT+AGG - chr4_3:42805584-42805603 None:intergenic 25.0%
! TTTACTACACATACAAACAA+AGG + chr4_3:42805637-42805656 Msa0641900:intron 25.0%
! AAATGTGAAAAAAGCAAAGA+GGG + chr4_3:42805722-42805741 Msa0641900:intron 25.0%
!!! TATAATTTTTGAAGTAGGCT+AGG - chr4_3:42806069-42806088 None:intergenic 25.0%
! TAGCCTACTTCAAAAATTAT+AGG + chr4_3:42806068-42806087 Msa0641900:intron 25.0%
!!! AGACCTATAATTTTTGAAGT+AGG - chr4_3:42806074-42806093 None:intergenic 25.0%
! AAAAAGGCCAAAACTTATTA+AGG + chr4_3:42806229-42806248 Msa0641900:intron 25.0%
! AACATAAGTCTTTGTATGAT+TGG - chr4_3:42806336-42806355 None:intergenic 25.0%
! CATGACCTGTTTAATTAAAT+AGG + chr4_3:42806463-42806482 Msa0641900:intron 25.0%
! TAATACTCTAACAAATAGGT+TGG - chr4_3:42807331-42807350 None:intergenic 25.0%
!! ATGGTGTTTTCCTTTATTAT+AGG + chr4_3:42807433-42807452 Msa0641900:intron 25.0%
!! TGGTGTTTTCCTTTATTATA+GGG + chr4_3:42807434-42807453 Msa0641900:intron 25.0%
!! CATTTTTCACCCTATAATAA+AGG - chr4_3:42807446-42807465 None:intergenic 25.0%
! CTTTATTATAGGGTGAAAAA+TGG + chr4_3:42807444-42807463 Msa0641900:intron 25.0%
!! AATGGAGTTATAGATTTTTC+CGG + chr4_3:42807462-42807481 Msa0641900:intron 25.0%
!! AGTTTTCAGATTACAAAATC+CGG - chr4_3:42807484-42807503 None:intergenic 25.0%
!!! TAACATGTATAGCCATTTTA+GGG + chr4_3:42807636-42807655 Msa0641900:intron 25.0%
! AAAACAAAAGGATATGAGTT+AGG - chr4_3:42807676-42807695 None:intergenic 25.0%
! TAACAATGACTCAAAACAAA+AGG - chr4_3:42807688-42807707 None:intergenic 25.0%
!! ATGAAATTTTGGATTTTGAG+GGG - chr4_3:42807835-42807854 None:intergenic 25.0%
!! GATGAAATTTTGGATTTTGA+GGG - chr4_3:42807836-42807855 None:intergenic 25.0%
! CTTGAAACTTTCAAAACATA+AGG - chr4_3:42808237-42808256 None:intergenic 25.0%
!!! ATGTTTTGAAAGTTTCAAGT+TGG + chr4_3:42808238-42808257 Msa0641900:intron 25.0%
! TTGAAACTTTCAAAACGTAA+GGG - chr4_3:42808497-42808516 None:intergenic 25.0%
! TTGAAACTTTCAAAACGTAA+GGG + chr4_3:42808497-42808516 Msa0641900:intron 25.0%
!!! CGTTTTAAAAGTTTTCAAGT+TGG - chr4_3:42808524-42808543 None:intergenic 25.0%
!! ATTTAGCAATATGGGTTAAT+AGG + chr4_3:42808668-42808687 Msa0641900:intron 25.0%
!!! TAAATTGTTGACTTGATTTG+GGG + chr4_3:42808987-42809006 Msa0641900:intron 25.0%
! TTTGTTGAAATGTTATTGAG+TGG - chr4_3:42809110-42809129 None:intergenic 25.0%
! ATCGAAGGTTTATATCTTAA+AGG + chr4_3:42809156-42809175 Msa0641900:intron 25.0%
! TCGAAGGTTTATATCTTAAA+GGG + chr4_3:42809157-42809176 Msa0641900:intron 25.0%
! ATAAATGACCTATATTACAG+GGG - chr4_3:42809198-42809217 None:intergenic 25.0%
! CATAAATGACCTATATTACA+GGG - chr4_3:42809199-42809218 None:intergenic 25.0%
!! CCCCTGTAAAATATTATTTT+TGG + chr4_3:42809226-42809245 Msa0641900:intron 25.0%
!! CGAAATTTTCTCAAATTAAC+AGG - chr4_3:42809371-42809390 None:intergenic 25.0%
!!! CCTTGTAATTTGAAGTTTTT+TGG - chr4_3:42809451-42809470 None:intergenic 25.0%
! CCAAAAAACTTCAAATTACA+AGG + chr4_3:42809448-42809467 Msa0641900:intron 25.0%
! AAAACTTCAAATTACAAGGA+CGG + chr4_3:42809452-42809471 Msa0641900:intron 25.0%
!! TCCCTGTAAAATTTTCTTTT+TGG - chr4_3:42809481-42809500 None:intergenic 25.0%
!! AAAATTTTACAGGGAAAAAC+CGG + chr4_3:42809486-42809505 Msa0641900:intron 25.0%
! GAAAATGACCTATATTACAT+TGG + chr4_3:42809814-42809833 Msa0641900:intron 25.0%
! AAATGACCTATATTACATTG+GGG + chr4_3:42809816-42809835 Msa0641900:intron 25.0%
! CTATTAATGTACAACAGAAT+TGG + chr4_3:42810210-42810229 Msa0641900:intron 25.0%
! TATTTGACATTGAGAAAGTA+TGG + chr4_3:42810321-42810340 Msa0641900:intron 25.0%
!! ATTTGACATTGAGAAAGTAT+GGG + chr4_3:42810322-42810341 Msa0641900:intron 25.0%
!!! CTTACATTTTAAGTGAAAAC+AGG - chr4_3:42810490-42810509 None:intergenic 25.0%
! ACATCAATAAGCCAAATATT+TGG + chr4_3:42810717-42810736 Msa0641900:intron 25.0%
TCTATTACTTTCTTGTTGAG+AGG - chr4_3:42801576-42801595 None:intergenic 30.0%
!! AAAGAGAAAGTTGATGTATG+TGG - chr4_3:42801700-42801719 None:intergenic 30.0%
! CACTTGCAAATTTGTTTATG+TGG + chr4_3:42801866-42801885 Msa0641900:intron 30.0%
TTTATGTGGCAGATTCTAAT+TGG + chr4_3:42801880-42801899 Msa0641900:intron 30.0%
AGAATAGCCTAGAAAAAACT+AGG + chr4_3:42801931-42801950 Msa0641900:intron 30.0%
TCAGTCAACATCAATACTTA+AGG - chr4_3:42802194-42802213 None:intergenic 30.0%
! CATATACACTTTTATATGGG+TGG + chr4_3:42802297-42802316 Msa0641900:five_prime_UTR 30.0%
GGAATATGAGATAGTATGTT+GGG - chr4_3:42802330-42802349 None:intergenic 30.0%
GCATTCTGACCAATATATAA+GGG - chr4_3:42802351-42802370 None:intergenic 30.0%
AGCATTCTGACCAATATATA+AGG - chr4_3:42802352-42802371 None:intergenic 30.0%
AAAAAGTTCATACCAGTGAT+AGG - chr4_3:42803040-42803059 None:intergenic 30.0%
!!! TTGTTGGTTTTTTATGACAG+CGG + chr4_3:42803197-42803216 Msa0641900:intron 30.0%
TGAACAATGTTGTCAACATT+GGG - chr4_3:42803272-42803291 None:intergenic 30.0%
ATGAACAATGTTGTCAACAT+TGG - chr4_3:42803273-42803292 None:intergenic 30.0%
!!! CATCGATTTTATGAACAACA+TGG + chr4_3:42803335-42803354 Msa0641900:five_prime_UTR 30.0%
TATGTGAGATACTTCAATTG+GGG - chr4_3:42803408-42803427 None:intergenic 30.0%
GTATGTGAGATACTTCAATT+GGG - chr4_3:42803409-42803428 None:intergenic 30.0%
TGTATGTGAGATACTTCAAT+TGG - chr4_3:42803410-42803429 None:intergenic 30.0%
GTTTGTATTATCTGTTTCAC+CGG + chr4_3:42803604-42803623 Msa0641900:intron 30.0%
AATGGTACCTCAATTTAATG+TGG + chr4_3:42804072-42804091 Msa0641900:five_prime_UTR 30.0%
TAAAAGGCCACATTAAATTG+AGG - chr4_3:42804082-42804101 None:intergenic 30.0%
!! GGAGTTACTTTCTAAAACAA+AGG - chr4_3:42804144-42804163 None:intergenic 30.0%
ACAAAAAGCAAGAAACCAAA+CGG - chr4_3:42804285-42804304 None:intergenic 30.0%
GATTGAAGAGACAATAATGA+TGG + chr4_3:42804345-42804364 Msa0641900:five_prime_UTR 30.0%
! ATAATGATGGCTGATTTAAG+TGG + chr4_3:42804358-42804377 Msa0641900:five_prime_UTR 30.0%
ATGAAAGAGATGAATTTACC+TGG - chr4_3:42804414-42804433 None:intergenic 30.0%
! CATTGAGGGTTTTCAAATTT+CGG + chr4_3:42804527-42804546 Msa0641900:intron 30.0%
CTGAAGATTAAAGTTGTAGA+TGG + chr4_3:42804622-42804641 Msa0641900:five_prime_UTR 30.0%
CAAGTTTAATAAGGTTGCTT+TGG + chr4_3:42804714-42804733 Msa0641900:five_prime_UTR 30.0%
TTTATGCAGCAAAAATGTAC+AGG + chr4_3:42804750-42804769 Msa0641900:CDS 30.0%
!! TTGTCCTCATGATGTTTTTA+GGG - chr4_3:42804982-42805001 None:intergenic 30.0%
!! AATACAATAGGGGTATCTTT+GGG - chr4_3:42805021-42805040 None:intergenic 30.0%
!! AAATACAATAGGGGTATCTT+TGG - chr4_3:42805022-42805041 None:intergenic 30.0%
GGATCAAAGGAAAATACAAT+AGG - chr4_3:42805033-42805052 None:intergenic 30.0%
TAATTCAGTTAGATGGTTAC+TGG - chr4_3:42805090-42805109 None:intergenic 30.0%
TCCCATTTAATTCAGTTAGA+TGG - chr4_3:42805097-42805116 None:intergenic 30.0%
ATGGAGAGTAAATTGCAAAT+AGG + chr4_3:42805279-42805298 Msa0641900:intron 30.0%
!! TTAACCTTTGGAGTATTGAT+TGG - chr4_3:42805382-42805401 None:intergenic 30.0%
CATACAAACAAAGGACAATT+TGG + chr4_3:42805646-42805665 Msa0641900:intron 30.0%
GAAATGTGAAAAAAGCAAAG+AGG + chr4_3:42805721-42805740 Msa0641900:intron 30.0%
AATGTGAAAAAAGCAAAGAG+GGG + chr4_3:42805723-42805742 Msa0641900:intron 30.0%
! TTAAATTTGAAATCAGAGGG+AGG + chr4_3:42805992-42806011 Msa0641900:intron 30.0%
AAAAATTATAGGTCTGAGCT+TGG + chr4_3:42806079-42806098 Msa0641900:intron 30.0%
! AGACTTTTAAATAGGCTTTC+AGG - chr4_3:42806168-42806187 None:intergenic 30.0%
! ATGTAAGCCTACTTCTAAAA+AGG + chr4_3:42806213-42806232 Msa0641900:intron 30.0%
! CTTTAGGCCTTAATAAGTTT+TGG - chr4_3:42806239-42806258 None:intergenic 30.0%
CAAACATATTTGTGTGCTTT+AGG - chr4_3:42806255-42806274 None:intergenic 30.0%
TAATTAAACAGGTCATGCTA+AGG - chr4_3:42806460-42806479 None:intergenic 30.0%
CAAGGCCTATTTAATTAAAC+AGG - chr4_3:42806471-42806490 None:intergenic 30.0%
ATCTAACAGATATGGTTAGT+TGG + chr4_3:42806969-42806988 Msa0641900:intron 30.0%
TTTGGAGGAAAATGAGAAAA+AGG - chr4_3:42807050-42807069 None:intergenic 30.0%
!! TTATCATTGATGGTGTATAG+TGG - chr4_3:42807097-42807116 None:intergenic 30.0%
GATAAAACTGTCAAATGAGA+TGG + chr4_3:42807250-42807269 Msa0641900:intron 30.0%
!!! CCCATTTGTTTTTTTGTTAG+GGG - chr4_3:42807298-42807317 None:intergenic 30.0%
CCCCTAACAAAAAAACAAAT+GGG + chr4_3:42807295-42807314 Msa0641900:intron 30.0%
!!! GCCCATTTGTTTTTTTGTTA+GGG - chr4_3:42807299-42807318 None:intergenic 30.0%
!!! AGCCCATTTGTTTTTTTGTT+AGG - chr4_3:42807300-42807319 None:intergenic 30.0%
!! TATTACTTTTCTCACCCTAT+AGG + chr4_3:42807346-42807365 Msa0641900:intron 30.0%
AATAAAGGAAAACACCATTC+CGG - chr4_3:42807431-42807450 None:intergenic 30.0%
TGTTTCCTGATTACATAATC+CGG + chr4_3:42807528-42807547 Msa0641900:intron 30.0%
!! ACCTTGAAAAAGAGTGTTTA+GGG - chr4_3:42807559-42807578 None:intergenic 30.0%
!! TACCTTGAAAAAGAGTGTTT+AGG - chr4_3:42807560-42807579 None:intergenic 30.0%
!! GTAACATGTATAGCCATTTT+AGG + chr4_3:42807635-42807654 Msa0641900:intron 30.0%
ACCTGTTCTTAGTCAAAAAT+CGG + chr4_3:42807707-42807726 Msa0641900:intron 30.0%
! TTAGTCAAAAATCGGGTTTT+CGG + chr4_3:42807715-42807734 Msa0641900:intron 30.0%
! CGATGAAATTTTGGATTTTG+AGG - chr4_3:42807837-42807856 None:intergenic 30.0%
TGGGAAAAGTAATACTCTAT+TGG + chr4_3:42808161-42808180 Msa0641900:intron 30.0%
!! TATTGGCTTAATTGCATGTT+TGG + chr4_3:42808178-42808197 Msa0641900:intron 30.0%
CTTGAAACTTTCAAAACGTA+AGG - chr4_3:42808496-42808515 None:intergenic 30.0%
!!! ACGTTTTGAAAGTTTCAAGT+TGG - chr4_3:42808298-42808317 None:intergenic 30.0%
CTTGAAACTTTCAAAACGTA+AGG + chr4_3:42808496-42808515 Msa0641900:intron 30.0%
TTGAAACTTCCAAAACGTAA+GGG + chr4_3:42808556-42808575 Msa0641900:intron 30.0%
!! AAGCCTACTCTATTTGTTAT+TGG + chr4_3:42808625-42808644 Msa0641900:intron 30.0%
!! AGCCTACTCTATTTGTTATT+GGG + chr4_3:42808626-42808645 Msa0641900:intron 30.0%
ATCCCAATAACAAATAGAGT+AGG - chr4_3:42808631-42808650 None:intergenic 30.0%
! ATTAGGTTTGTTCAGTTGAA+GGG - chr4_3:42808889-42808908 None:intergenic 30.0%
! TATTAGGTTTGTTCAGTTGA+AGG - chr4_3:42808890-42808909 None:intergenic 30.0%
GATATAAACCTTCGATTCAA+TGG - chr4_3:42809152-42809171 None:intergenic 30.0%
TAAATGACCTATATTACAGG+GGG - chr4_3:42809197-42809216 None:intergenic 30.0%
CCATAAATGACCTATATTAC+AGG - chr4_3:42809200-42809219 None:intergenic 30.0%
CCTGTAATATAGGTCATTTA+TGG + chr4_3:42809197-42809216 Msa0641900:intron 30.0%
! AAATTTGCTCAAATTGCAGA+GGG - chr4_3:42809339-42809358 None:intergenic 30.0%
TCTGCAATTTGAGCAAATTT+CGG + chr4_3:42809339-42809358 Msa0641900:intron 30.0%
ACAAAATCGATGATATGGTA+GGG - chr4_3:42809401-42809420 None:intergenic 30.0%
TACAAAATCGATGATATGGT+AGG - chr4_3:42809402-42809421 None:intergenic 30.0%
ACTGTACAAAATCGATGATA+TGG - chr4_3:42809406-42809425 None:intergenic 30.0%
AAATGACCTATATTACAGTG+GGG - chr4_3:42809586-42809605 None:intergenic 30.0%
GAAATGACCTATATTACAGT+GGG - chr4_3:42809587-42809606 None:intergenic 30.0%
ACTGTAATATAGGTCATTTC+CGG + chr4_3:42809587-42809606 Msa0641900:intron 30.0%
!! ATTTTTGTTTGGCCTATTAG+GGG - chr4_3:42809675-42809694 None:intergenic 30.0%
!! CATTTTTGTTTGGCCTATTA+GGG - chr4_3:42809676-42809695 None:intergenic 30.0%
!! TCATTTTTGTTTGGCCTATT+AGG - chr4_3:42809677-42809696 None:intergenic 30.0%
!! TGGTTTTTGTTTGACCTATT+AGG + chr4_3:42809721-42809740 Msa0641900:intron 30.0%
!! GGTTTTTGTTTGACCTATTA+GGG + chr4_3:42809722-42809741 Msa0641900:intron 30.0%
!! GTTTTTGTTTGACCTATTAG+GGG + chr4_3:42809723-42809742 Msa0641900:intron 30.0%
!! TTTTTGTTTGACCTATTAGG+GGG + chr4_3:42809724-42809743 Msa0641900:intron 30.0%
AATGACCTATATTACATTGG+GGG + chr4_3:42809817-42809836 Msa0641900:intron 30.0%
TAATTCATGCCTTAGAAAGA+TGG + chr4_3:42810273-42810292 Msa0641900:CDS 30.0%
ATGAACATTCCATCTTTCTA+AGG - chr4_3:42810285-42810304 None:intergenic 30.0%
TCGTTATTTGTGCATCTATT+TGG + chr4_3:42810663-42810682 Msa0641900:intron 30.0%
TGGCTTATTGATGTAAAACA+TGG - chr4_3:42810711-42810730 None:intergenic 30.0%
AATAAGCCAAATATTTGGCA+TGG + chr4_3:42810722-42810741 Msa0641900:intron 30.0%
GAAAAACCATGCCAAATATT+TGG - chr4_3:42810731-42810750 None:intergenic 30.0%
! TAATTTGTGGAAAGGGTCAA+GGG - chr4_3:42801377-42801396 None:intergenic 35.0%
!! TTAATTTGTGGAAAGGGTCA+AGG - chr4_3:42801378-42801397 None:intergenic 35.0%
CGAACTTAGTGTTCATAATC+AGG - chr4_3:42802249-42802268 None:intergenic 35.0%
GGGAATATGAGATAGTATGT+TGG - chr4_3:42802331-42802350 None:intergenic 35.0%
! TTCTTTTCCCTTTAGCAGTT+TGG - chr4_3:42802408-42802427 None:intergenic 35.0%
TTTCATTGTGTGACATTTGC+AGG + chr4_3:42802792-42802811 Msa0641900:intron 35.0%
TTCATTGTGTGACATTTGCA+GGG + chr4_3:42802793-42802812 Msa0641900:intron 35.0%
CAGTAGTATAAGAATTCCAC+TGG - chr4_3:42802941-42802960 None:intergenic 35.0%
CAGTGGAATTCTTATACTAC+TGG + chr4_3:42802939-42802958 Msa0641900:five_prime_UTR 35.0%
! TTGAAGAATGATGGTGAGAA+TGG - chr4_3:42803006-42803025 None:intergenic 35.0%
CAGTGACAATTGAAGAATGA+TGG - chr4_3:42803015-42803034 None:intergenic 35.0%
GTTCATGAAAAAATCGTCTG+TGG + chr4_3:42803287-42803306 Msa0641900:five_prime_UTR 35.0%
AAGTAGGAGAAGAGTTTCTT+AGG - chr4_3:42803384-42803403 None:intergenic 35.0%
ATACTTCAATTGGGGAAAGT+AGG - chr4_3:42803400-42803419 None:intergenic 35.0%
GTTGTAATGCAAACTTACGA+TGG - chr4_3:42803435-42803454 None:intergenic 35.0%
!!! TTCCAATTATTTTAGGGGTG+TGG + chr4_3:42803471-42803490 Msa0641900:intron 35.0%
TGACTACATTTATGGTACTG+TGG + chr4_3:42803899-42803918 Msa0641900:five_prime_UTR 35.0%
GGTACCATTTAGATGTTTGA+GGG - chr4_3:42804061-42804080 None:intergenic 35.0%
AGGTACCATTTAGATGTTTG+AGG - chr4_3:42804062-42804081 None:intergenic 35.0%
! AGCAAAGAGCACATTGTAAA+AGG - chr4_3:42804098-42804117 None:intergenic 35.0%
!!! TTGCTTTTGAGTTGGATTAG+TGG + chr4_3:42804113-42804132 Msa0641900:five_prime_UTR 35.0%
!! GTTGTTGCTTGTTATCCTTA+TGG - chr4_3:42804260-42804279 None:intergenic 35.0%
CAAAAAGCAAGAAACCAAAC+GGG - chr4_3:42804284-42804303 None:intergenic 35.0%
!! AAGTCTAGGACTTTTAAACC+AGG + chr4_3:42804393-42804412 Msa0641900:five_prime_UTR 35.0%
ACTGCGCACTTTATATTGAA+AGG + chr4_3:42804590-42804609 Msa0641900:five_prime_UTR 35.0%
TGCTTAACAACATTCCCAAA+GGG + chr4_3:42804668-42804687 Msa0641900:five_prime_UTR 35.0%
! GCTGCATAAAGCATTAGTAA+TGG - chr4_3:42804740-42804759 None:intergenic 35.0%
!! GTTAGTCTTGAACATGAATC+TGG - chr4_3:42804891-42804910 None:intergenic 35.0%
TTAAAGAAGCCGTAAATAGG+CGG + chr4_3:42804938-42804957 Msa0641900:intron 35.0%
AACACCCTAAAAACATCATG+AGG + chr4_3:42804975-42804994 Msa0641900:intron 35.0%
! GTTGTCCTCATGATGTTTTT+AGG - chr4_3:42804983-42805002 None:intergenic 35.0%
!!! ATCTTTGGGTGTATTTTGGT+GGG - chr4_3:42805007-42805026 None:intergenic 35.0%
!! TATCTTTGGGTGTATTTTGG+TGG - chr4_3:42805008-42805027 None:intergenic 35.0%
GATGTCATAGAAGACGTTAA+GGG - chr4_3:42805054-42805073 None:intergenic 35.0%
TGATGTCATAGAAGACGTTA+AGG - chr4_3:42805055-42805074 None:intergenic 35.0%
ATCACCAATCAATACTCCAA+AGG + chr4_3:42805375-42805394 Msa0641900:CDS 35.0%
TGTTTAGATATAGAGACGGA+GGG - chr4_3:42805488-42805507 None:intergenic 35.0%
TGGGTGTTTAGATATAGAGA+CGG - chr4_3:42805492-42805511 None:intergenic 35.0%
!! GGGAGTATTAAACTATGAGA+AGG + chr4_3:42805763-42805782 Msa0641900:intron 35.0%
! GCTTTATCAGGCCTTTAAAA+AGG - chr4_3:42806146-42806165 None:intergenic 35.0%
!! GTTTTGGCCTTTTTAGAAGT+AGG - chr4_3:42806223-42806242 None:intergenic 35.0%
! AGCCTATTTAAAGCCTAGTT+CGG - chr4_3:42806534-42806553 None:intergenic 35.0%
!! AACTAGGCTTTAAATAGGCT+AGG + chr4_3:42806534-42806553 Msa0641900:intron 35.0%
!! AAGAGGAAGTACCACAATTA+GGG - chr4_3:42806597-42806616 None:intergenic 35.0%
!! TAAGAGGAAGTACCACAATT+AGG - chr4_3:42806598-42806617 None:intergenic 35.0%
!!! TGCTTCCTCTTCTTTGTTTT+TGG + chr4_3:42806712-42806731 Msa0641900:intron 35.0%
!!! TTCCTCTTCTTTGTTTTTGG+TGG + chr4_3:42806715-42806734 Msa0641900:intron 35.0%
CATAAAATATGCAAAGTCCC+CGG - chr4_3:42806744-42806763 None:intergenic 35.0%
! TATGGTTAGTTGGAGATGAA+TGG + chr4_3:42806979-42806998 Msa0641900:CDS 35.0%
! ATGGTTAGTTGGAGATGAAT+GGG + chr4_3:42806980-42806999 Msa0641900:CDS 35.0%
! CAACCTTTTCGCATTTTCTT+TGG - chr4_3:42807068-42807087 None:intergenic 35.0%
!!! TTTTTTTGTTAGGGGCCTTT+CGG - chr4_3:42807290-42807309 None:intergenic 35.0%
GCCCCTAACAAAAAAACAAA+TGG + chr4_3:42807294-42807313 Msa0641900:intron 35.0%
!! GCATTTTTGGAAAAAACGCA+GGG - chr4_3:42808118-42808137 None:intergenic 35.0%
! TTTTTCCAAAAATGCCCTTG+AGG + chr4_3:42807388-42807407 Msa0641900:intron 35.0%
!! CTTGAAAAAGAGTGTTTAGG+GGG - chr4_3:42807557-42807576 None:intergenic 35.0%
!! CCTTGAAAAAGAGTGTTTAG+GGG - chr4_3:42807558-42807577 None:intergenic 35.0%
! TGATTTGTGCTGATACAGTT+CGG - chr4_3:42807604-42807623 None:intergenic 35.0%
CCTGTTCTTAGTCAAAAATC+GGG + chr4_3:42807708-42807727 Msa0641900:intron 35.0%
! TAGTCAAAAATCGGGTTTTC+GGG + chr4_3:42807716-42807735 Msa0641900:intron 35.0%
! GGGTCTAAACGATGAAATTT+TGG - chr4_3:42807846-42807865 None:intergenic 35.0%
! TTTAAAATCCAGACTGCACA+AGG + chr4_3:42808095-42808114 Msa0641900:intron 35.0%
TTAAAATCCAGACTGCACAA+GGG + chr4_3:42808096-42808115 Msa0641900:intron 35.0%
!! GCATTTTTGGAAAAAACGCA+GGG + chr4_3:42808118-42808137 Msa0641900:intron 35.0%
!! TATTACTTTTCCCACCCTAT+AGG - chr4_3:42808155-42808174 None:intergenic 35.0%
!!! ACGTTTTGGAAGTTTCAAGT+TGG - chr4_3:42808554-42808573 None:intergenic 35.0%
CTTGAAACTTCCAAAACGTA+AGG + chr4_3:42808555-42808574 Msa0641900:intron 35.0%
AGTAGGCTTAATTGCATGTT+TGG - chr4_3:42808614-42808633 None:intergenic 35.0%
!! TTTGGGGTACTACTTTTACT+CGG + chr4_3:42809003-42809022 Msa0641900:intron 35.0%
! TACTCGGATTGAAGTTGTTT+TGG + chr4_3:42809019-42809038 Msa0641900:intron 35.0%
!! ACTCGGATTGAAGTTGTTTT+GGG + chr4_3:42809020-42809039 Msa0641900:intron 35.0%
AGAATCTACCATTGAATCGA+AGG + chr4_3:42809141-42809160 Msa0641900:intron 35.0%
! TGTTTTACCCCCTGTAATAT+AGG + chr4_3:42809187-42809206 Msa0641900:intron 35.0%
AAAGCTTCCTCAAATTACAG+GGG - chr4_3:42809309-42809328 None:intergenic 35.0%
CAAAGCTTCCTCAAATTACA+GGG - chr4_3:42809310-42809329 None:intergenic 35.0%
! AATTTGCTCAAATTGCAGAG+GGG - chr4_3:42809338-42809357 None:intergenic 35.0%
! GAAATTTGCTCAAATTGCAG+AGG - chr4_3:42809340-42809359 None:intergenic 35.0%
AAAATCGATGATATGGTAGG+GGG - chr4_3:42809399-42809418 None:intergenic 35.0%
CAAAATCGATGATATGGTAG+GGG - chr4_3:42809400-42809419 None:intergenic 35.0%
TCTTTACCCCACTGTAATAT+AGG + chr4_3:42809577-42809596 Msa0641900:intron 35.0%
GGAAATGACCTATATTACAG+TGG - chr4_3:42809588-42809607 None:intergenic 35.0%
AAAATTTACAGGGGGAAAAC+CGG - chr4_3:42809609-42809628 None:intergenic 35.0%
!!! TTTTGATTTACCCCCCTAAT+AGG + chr4_3:42809660-42809679 Msa0641900:intron 35.0%
!! TTTTTGTTTGGCCTATTAGG+GGG - chr4_3:42809674-42809693 None:intergenic 35.0%
!! TTTTGTTTGACCTATTAGGG+GGG + chr4_3:42809725-42809744 Msa0641900:intron 35.0%
!!! TTTTGATTTACCCCCCTAAT+AGG - chr4_3:42809660-42809679 None:intergenic 35.0%
CTTTACCCCCAATGTAATAT+AGG - chr4_3:42809825-42809844 None:intergenic 35.0%
!! GATTAGTTTGGAGTCTTAAG+AGG - chr4_3:42810374-42810393 None:intergenic 35.0%
! CCAAACTTGTCTGATTAGTT+TGG - chr4_3:42810386-42810405 None:intergenic 35.0%
CCAAACTAATCAGACAAGTT+TGG + chr4_3:42810383-42810402 Msa0641900:intron 35.0%
! AATGACTTGTCAAACTGCTT+TGG - chr4_3:42810600-42810619 None:intergenic 35.0%
TAACGAGAACTCGTCATTAA+AGG - chr4_3:42810649-42810668 None:intergenic 35.0%
TCATACTATGGCTTCCAAAG+CGG + chr4_3:42801219-42801238 Msa0641900:five_prime_UTR 40.0%
AATTTGTGGAAAGGGTCAAG+GGG - chr4_3:42801376-42801395 None:intergenic 40.0%
AGTTGAAAGGTCAATGTTCG+TGG + chr4_3:42801661-42801680 Msa0641900:intron 40.0%
! TTTTCTTTAGCTAGTGCCTC+GGG - chr4_3:42802053-42802072 None:intergenic 40.0%
! GTTTTCTTTAGCTAGTGCCT+CGG - chr4_3:42802054-42802073 None:intergenic 40.0%
TATATGCTACGAGCAATCCA+CGG - chr4_3:42802283-42802302 None:intergenic 40.0%
GAATGCTGCACAATCAGATA+TGG + chr4_3:42802365-42802384 Msa0641900:five_prime_UTR 40.0%
AAGAATTGTTGACAAAGGCC+TGG + chr4_3:42802426-42802445 Msa0641900:five_prime_UTR 40.0%
! AATTGGTTTCTCTGTCGACT+TGG - chr4_3:42802459-42802478 None:intergenic 40.0%
AAGTCGACAGAGAAACCAAT+TGG + chr4_3:42802458-42802477 Msa0641900:five_prime_UTR 40.0%
! ACATCCATTTGCTGAGATGT+TGG + chr4_3:42803224-42803243 Msa0641900:five_prime_UTR 40.0%
TATGCCAACATCTCAGCAAA+TGG - chr4_3:42803231-42803250 None:intergenic 40.0%
CACCACACCCCTAAAATAAT+TGG - chr4_3:42803476-42803495 None:intergenic 40.0%
! TTGACTAGGTGTTGTGTGTA+AGG + chr4_3:42803521-42803540 Msa0641900:intron 40.0%
! TGACTAGGTGTTGTGTGTAA+GGG + chr4_3:42803522-42803541 Msa0641900:intron 40.0%
!! AAACTAAAGGTGCCCTATGT+AGG - chr4_3:42803588-42803607 None:intergenic 40.0%
CGCTGCATCACACAAAATTT+AGG + chr4_3:42803847-42803866 Msa0641900:five_prime_UTR 40.0%
AGCTTCATATGTAGCATCTG+AGG - chr4_3:42803931-42803950 None:intergenic 40.0%
TCCATCTTTCAACTACGCTT+AGG + chr4_3:42804014-42804033 Msa0641900:five_prime_UTR 40.0%
CCATCTTTCAACTACGCTTA+GGG + chr4_3:42804015-42804034 Msa0641900:five_prime_UTR 40.0%
TTTAGATGTTTGAGGGTTGG+AGG - chr4_3:42804054-42804073 None:intergenic 40.0%
CCATTTAGATGTTTGAGGGT+TGG - chr4_3:42804057-42804076 None:intergenic 40.0%
CCAACCCTCAAACATCTAAA+TGG + chr4_3:42804054-42804073 Msa0641900:five_prime_UTR 40.0%
!! TGTGCTCTTTGCTTTTGAGT+TGG + chr4_3:42804105-42804124 Msa0641900:five_prime_UTR 40.0%
!!! CTTTTGAGTTGGATTAGTGG+AGG + chr4_3:42804116-42804135 Msa0641900:five_prime_UTR 40.0%
! GGCTGATTTAAGTGGAGTAA+AGG + chr4_3:42804366-42804385 Msa0641900:five_prime_UTR 40.0%
GGAGTAAAGGTGATAAGTCT+AGG + chr4_3:42804379-42804398 Msa0641900:five_prime_UTR 40.0%
GTGCTTAACAACATTCCCAA+AGG + chr4_3:42804667-42804686 Msa0641900:five_prime_UTR 40.0%
ACTCAGGGGCAAGTTTAATA+AGG + chr4_3:42804705-42804724 Msa0641900:five_prime_UTR 40.0%
GTCTTGAACATGAATCTGGT+TGG - chr4_3:42804887-42804906 None:intergenic 40.0%
TTGGATGTTCCGCCTATTTA+CGG - chr4_3:42804950-42804969 None:intergenic 40.0%
! GGGTATCTTTGGGTGTATTT+TGG - chr4_3:42805011-42805030 None:intergenic 40.0%
AGAAGACGTTAAGGGATCAA+AGG - chr4_3:42805046-42805065 None:intergenic 40.0%
GTGTTTAGATATAGAGACGG+AGG - chr4_3:42805489-42805508 None:intergenic 40.0%
AGCAAAGAGGGGTTACATTA+AGG + chr4_3:42805734-42805753 Msa0641900:intron 40.0%
GCAAAGAGGGGTTACATTAA+GGG + chr4_3:42805735-42805754 Msa0641900:intron 40.0%
! GTCTGACCTGACCTTTTTAA+AGG + chr4_3:42806132-42806151 Msa0641900:intron 40.0%
! ATCAGGCCTTTAAAAAGGTC+AGG - chr4_3:42806141-42806160 None:intergenic 40.0%
! ATAGGCTTTCAGGCTTTATC+AGG - chr4_3:42806158-42806177 None:intergenic 40.0%
AAAAGCCTATTAAGCCCATC+AGG - chr4_3:42806430-42806449 None:intergenic 40.0%
! CCAGACTCAAGCTTTTTACA+AGG - chr4_3:42806489-42806508 None:intergenic 40.0%
CCTTGTAAAAAGCTTGAGTC+TGG + chr4_3:42806486-42806505 Msa0641900:intron 40.0%
! GCCTTGTTAATAAACGAGCT+GGG + chr4_3:42806508-42806527 Msa0641900:intron 40.0%
!! AGAGGAAGTACCACAATTAG+GGG - chr4_3:42806596-42806615 None:intergenic 40.0%
TTGTGGTACTTCCTCTTACA+AGG + chr4_3:42806600-42806619 Msa0641900:intron 40.0%
AAAGAAGAGGAAGCAGTTAG+GGG - chr4_3:42806707-42806726 None:intergenic 40.0%
CAAAGAAGAGGAAGCAGTTA+GGG - chr4_3:42806708-42806727 None:intergenic 40.0%
ACAAAGAAGAGGAAGCAGTT+AGG - chr4_3:42806709-42806728 None:intergenic 40.0%
CACCACCAAAAACAAAGAAG+AGG - chr4_3:42806720-42806739 None:intergenic 40.0%
!!! CTCTTCTTTGTTTTTGGTGG+TGG + chr4_3:42806718-42806737 Msa0641900:intron 40.0%
! CCTTTTCGCATTTTCTTTGG+AGG - chr4_3:42807065-42807084 None:intergenic 40.0%
CCTCCAAAGAAAATGCGAAA+AGG + chr4_3:42807062-42807081 Msa0641900:CDS 40.0%
GCAGTAGGACTTATCATTGA+TGG - chr4_3:42807107-42807126 None:intergenic 40.0%
!!! TTTTTTGTTAGGGGCCTTTC+GGG - chr4_3:42807289-42807308 None:intergenic 40.0%
!! GGCATTTTTGGAAAAAACGC+AGG - chr4_3:42808117-42808136 None:intergenic 40.0%
AAAAATGCCCTTGAGGTTTC+CGG + chr4_3:42807395-42807414 Msa0641900:intron 40.0%
ATGAAATCCGGAAACCTCAA+GGG - chr4_3:42807405-42807424 None:intergenic 40.0%
TATGAAATCCGGAAACCTCA+AGG - chr4_3:42807406-42807425 None:intergenic 40.0%
GGTTTCCGGATTTCATAATC+CGG + chr4_3:42807409-42807428 Msa0641900:intron 40.0%
CCATTCCGGATTATGAAATC+CGG - chr4_3:42807417-42807436 None:intergenic 40.0%
GGTTTCCGGATTATGTAATC+AGG - chr4_3:42807536-42807555 None:intergenic 40.0%
!! CCCCTAAACACTCTTTTTCA+AGG + chr4_3:42807555-42807574 Msa0641900:intron 40.0%
!! CCCGATTTTTGACTAAGAAC+AGG - chr4_3:42807711-42807730 None:intergenic 40.0%
TGAAATGTGAGAGAGTCTGA+TGG + chr4_3:42808045-42808064 Msa0641900:intron 40.0%
!! GGCATTTTTGGAAAAAACGC+AGG + chr4_3:42808117-42808136 Msa0641900:intron 40.0%
!!! CAAGTTGGTCCCTTATGTTT+TGG + chr4_3:42808224-42808243 Msa0641900:intron 40.0%
CAAGTCGGTCCAAAACATAA+GGG - chr4_3:42808418-42808437 None:intergenic 40.0%
TCAAGTCGGTCCAAAACATA+AGG - chr4_3:42808419-42808438 None:intergenic 40.0%
! GGGGGCAAAAATTTTCATGA+AGG - chr4_3:42809290-42809309 None:intergenic 40.0%
! TTTTTGCCCCCTGTAATTTG+AGG + chr4_3:42809299-42809318 Msa0641900:intron 40.0%
AAGCTTCCTCAAATTACAGG+GGG - chr4_3:42809308-42809327 None:intergenic 40.0%
CCAAAGCTTCCTCAAATTAC+AGG - chr4_3:42809311-42809330 None:intergenic 40.0%
CCTGTAATTTGAGGAAGCTT+TGG + chr4_3:42809308-42809327 Msa0641900:intron 40.0%
CCTGTAATATAGGTCGTTTC+CGG - chr4_3:42809508-42809527 None:intergenic 40.0%
CGGAAACGACCTATATTACA+GGG + chr4_3:42809506-42809525 Msa0641900:intron 40.0%
GGAAACGACCTATATTACAG+GGG + chr4_3:42809507-42809526 Msa0641900:intron 40.0%
GAAACGACCTATATTACAGG+GGG + chr4_3:42809508-42809527 Msa0641900:intron 40.0%
TGCTTTACCCCCTGTAATAT+AGG - chr4_3:42809518-42809537 None:intergenic 40.0%
!! TTTTGTTTGGCCTATTAGGG+GGG - chr4_3:42809673-42809692 None:intergenic 40.0%
AGATGGAATGTTCATGAGTG+TGG + chr4_3:42810290-42810309 Msa0641900:CDS 40.0%
TCTTAAGAGGTAGGTAACCA+TGG - chr4_3:42810361-42810380 None:intergenic 40.0%
! AGTTTGGAGTCTTAAGAGGT+AGG - chr4_3:42810370-42810389 None:intergenic 40.0%
! TGTTCATAGACTCTCTAGAG+TGG - chr4_3:42810526-42810545 None:intergenic 40.0%
CATACTATGGCTTCCAAAGC+GGG + chr4_3:42801220-42801239 Msa0641900:five_prime_UTR 45.0%
GTTTCCAAGGCCAGTTTGTA+AGG - chr4_3:42801249-42801268 None:intergenic 45.0%
TTTCTTTAGCTAGTGCCTCG+GGG - chr4_3:42802052-42802071 None:intergenic 45.0%
ATATGCTACGAGCAATCCAC+GGG - chr4_3:42802282-42802301 None:intergenic 45.0%
TCACGCTACCAAACTGCTAA+AGG + chr4_3:42802397-42802416 Msa0641900:five_prime_UTR 45.0%
CACGCTACCAAACTGCTAAA+GGG + chr4_3:42802398-42802417 Msa0641900:five_prime_UTR 45.0%
! CATGGTAAGTTGGCAAGCAT+AGG - chr4_3:42802872-42802891 None:intergenic 45.0%
CTATGCTTGCCAACTTACCA+TGG + chr4_3:42802870-42802889 Msa0641900:five_prime_UTR 45.0%
TGTTCTCCACCATGGTAAGT+TGG - chr4_3:42802882-42802901 None:intergenic 45.0%
! TTACCATGGTGGAGAACAGA+TGG + chr4_3:42802884-42802903 Msa0641900:five_prime_UTR 45.0%
ATTGTCACTGAGCCTATCAC+TGG + chr4_3:42803025-42803044 Msa0641900:five_prime_UTR 45.0%
CCTACATGCAACATCCATGA+GGG - chr4_3:42803499-42803518 None:intergenic 45.0%
CCTCATGGATGTTGCATGTA+GGG + chr4_3:42803497-42803516 Msa0641900:intron 45.0%
GTTGCATGTAGGGTTTGACT+AGG + chr4_3:42803507-42803526 Msa0641900:intron 45.0%
TACTCAAGACGAACAGAGAC+CGG - chr4_3:42803626-42803645 None:intergenic 45.0%
TGTGTTAAGTGCACCACATC+TGG - chr4_3:42803978-42803997 None:intergenic 45.0%
CCCTAAGCGTAGTTGAAAGA+TGG - chr4_3:42804018-42804037 None:intergenic 45.0%
CTGCAGCTTGAGATCTTTGA+AGG - chr4_3:42804165-42804184 None:intergenic 45.0%
AAGATCTCAAGCTGCAGTGT+TGG + chr4_3:42804168-42804187 Msa0641900:five_prime_UTR 45.0%
AACAAGCAACAACACCCGTT+TGG + chr4_3:42804267-42804286 Msa0641900:intron 45.0%
! AGCACTTGATTGGTCCCTTT+GGG - chr4_3:42804685-42804704 None:intergenic 45.0%
! TAGCACTTGATTGGTCCCTT+TGG - chr4_3:42804686-42804705 None:intergenic 45.0%
! GACCAATCAAGTGCTACTCA+GGG + chr4_3:42804690-42804709 Msa0641900:five_prime_UTR 45.0%
! ACCAATCAAGTGCTACTCAG+GGG + chr4_3:42804691-42804710 Msa0641900:five_prime_UTR 45.0%
AGCTGAAAGAGCTTGAACGA+AGG + chr4_3:42805323-42805342 Msa0641900:CDS 45.0%
GCTGAAAGAGCTTGAACGAA+GGG + chr4_3:42805324-42805343 Msa0641900:CDS 45.0%
TGATAGAGCCAAGCTTCCAT+TGG - chr4_3:42805359-42805378 None:intergenic 45.0%
AGAGGGGTTACATTAAGGGA+CGG + chr4_3:42805739-42805758 Msa0641900:intron 45.0%
TGAAATCAGAGGGAGGATTG+TGG + chr4_3:42805999-42806018 Msa0641900:intron 45.0%
GAAATCAGAGGGAGGATTGT+GGG + chr4_3:42806000-42806019 Msa0641900:intron 45.0%
AAATCAGAGGGAGGATTGTG+GGG + chr4_3:42806001-42806020 Msa0641900:intron 45.0%
!!! TTTTGAAGTAGGCTAGGCTC+AGG - chr4_3:42806063-42806082 None:intergenic 45.0%
!! ATGAGCCTATGAGGGGTATT+AGG - chr4_3:42806105-42806124 None:intergenic 45.0%
CTCGAAAATGAGCCTATGAG+GGG - chr4_3:42806112-42806131 None:intergenic 45.0%
CCTCGAAAATGAGCCTATGA+GGG - chr4_3:42806113-42806132 None:intergenic 45.0%
ACCTCGAAAATGAGCCTATG+AGG - chr4_3:42806114-42806133 None:intergenic 45.0%
!! GGCCTTGTTAATAAACGAGC+TGG + chr4_3:42806507-42806526 Msa0641900:intron 45.0%
GCCCAGCTCGTTTATTAACA+AGG - chr4_3:42806512-42806531 None:intergenic 45.0%
!! GGCCGAACTAGGCTTTAAAT+AGG + chr4_3:42806529-42806548 Msa0641900:intron 45.0%
CTTTAAATAGGCTAGGCCGT+AGG + chr4_3:42806541-42806560 Msa0641900:intron 45.0%
! GAAGTACCACAATTAGGGGT+GGG - chr4_3:42806592-42806611 None:intergenic 45.0%
TGGTACTTCCTCTTACAAGG+TGG + chr4_3:42806603-42806622 Msa0641900:intron 45.0%
AAACAAGAAAATGGGCCCTC+CGG - chr4_3:42806629-42806648 None:intergenic 45.0%
!!! TCTTTGTTTTTGGTGGTGGC+CGG + chr4_3:42806722-42806741 Msa0641900:intron 45.0%
GAGCAAATGCAAGCATCAGA+AGG + chr4_3:42807011-42807030 Msa0641900:CDS 45.0%
TGCAGGTTTATGACTGCAGT+AGG - chr4_3:42807122-42807141 None:intergenic 45.0%
CATAAACCTGCATTCGTGTG+AGG + chr4_3:42807130-42807149 Msa0641900:CDS 45.0%
AATGAGATGGTTGATCCGAG+AGG + chr4_3:42807263-42807282 Msa0641900:intron 45.0%
!!! GGAAACCTCAAGGGCATTTT+TGG - chr4_3:42807396-42807415 None:intergenic 45.0%
CCGGATTTCATAATCCGGAA+TGG + chr4_3:42807414-42807433 Msa0641900:intron 45.0%
!! AAGAGTGTTTAGGGGGTTTC+CGG - chr4_3:42807550-42807569 None:intergenic 45.0%
CCGTAAGAAGTCCATTCTAC+GGG - chr4_3:42807805-42807824 None:intergenic 45.0%
! CCCGTAGAATGGACTTCTTA+CGG + chr4_3:42807802-42807821 Msa0641900:intron 45.0%
CCCGTAAGAAGTCCATTCTA+CGG - chr4_3:42807806-42807825 None:intergenic 45.0%
! CCGTAGAATGGACTTCTTAC+GGG + chr4_3:42807803-42807822 Msa0641900:intron 45.0%
AAAAATGCCCTTGTGCAGTC+TGG - chr4_3:42808106-42808125 None:intergenic 45.0%
!!! AGACTGCACAAGGGCATTTT+TGG + chr4_3:42808105-42808124 Msa0641900:intron 45.0%
!!! CAAGTTGGTCCCTTACGTTT+TGG - chr4_3:42808284-42808303 None:intergenic 45.0%
CCGGAAACGACCTATATTAC+AGG + chr4_3:42809505-42809524 Msa0641900:intron 45.0%
CAAGCACTCATGACTCTTCT+TGG - chr4_3:42810239-42810258 None:intergenic 45.0%
CAAGAAGAGTCATGAGTGCT+TGG + chr4_3:42810237-42810256 Msa0641900:CDS 45.0%
!!! TTCTTTAAAAAAAATAAAAT+TGG + chr4_3:42809701-42809720 Msa0641900:intron 5.0%
!! TAATGTTTATATTAATTATA+GGG - chr4_3:42809857-42809876 None:intergenic 5.0%
!! TTAATGTTTATATTAATTAT+AGG - chr4_3:42809858-42809877 None:intergenic 5.0%
!! ATTAATATAAACATTAATTT+CGG + chr4_3:42809861-42809880 Msa0641900:intron 5.0%
GTTTGTAAGGATGCCCGCTT+TGG - chr4_3:42801236-42801255 None:intergenic 50.0%
AAGCGGGCATCCTTACAAAC+TGG + chr4_3:42801236-42801255 Msa0641900:five_prime_UTR 50.0%
! GCATCCTTACAAACTGGCCT+TGG + chr4_3:42801242-42801261 Msa0641900:five_prime_UTR 50.0%
!! AACTGGCCTTGGAAACCTCT+TGG + chr4_3:42801253-42801272 Msa0641900:five_prime_UTR 50.0%
!! ACTGGCCTTGGAAACCTCTT+GGG + chr4_3:42801254-42801273 Msa0641900:five_prime_UTR 50.0%
AAGCTCCCAAGAGGTTTCCA+AGG - chr4_3:42801262-42801281 None:intergenic 50.0%
GAAACCTCTTGGGAGCTTCA+AGG + chr4_3:42801264-42801283 Msa0641900:five_prime_UTR 50.0%
ACAACCTTGAAGCTCCCAAG+AGG - chr4_3:42801271-42801290 None:intergenic 50.0%
TTCTTTAGCTAGTGCCTCGG+GGG - chr4_3:42802051-42802070 None:intergenic 50.0%
AGTTCGTGATTCTAAGCCCG+TGG + chr4_3:42802263-42802282 Msa0641900:intron 50.0%
!! TGTCGACTTGGTCGAATTCC+AGG - chr4_3:42802447-42802466 None:intergenic 50.0%
TGCTTGCCAACTTACCATGG+TGG + chr4_3:42802873-42802892 Msa0641900:five_prime_UTR 50.0%
ACACCATCTGTTCTCCACCA+TGG - chr4_3:42802890-42802909 None:intergenic 50.0%
! ATGGTGGAGAACAGATGGTG+TGG + chr4_3:42802889-42802908 Msa0641900:five_prime_UTR 50.0%
CTTACAGCTCTCTTGCATGC+TGG + chr4_3:42802914-42802933 Msa0641900:five_prime_UTR 50.0%
CCCTCATGGATGTTGCATGT+AGG + chr4_3:42803496-42803515 Msa0641900:intron 50.0%
CCCTACATGCAACATCCATG+AGG - chr4_3:42803500-42803519 None:intergenic 50.0%
!! CTAAAGGTGCCCTATGTAGG+CGG - chr4_3:42803585-42803604 None:intergenic 50.0%
AGCTTGTGTGAAGAGACCAG+AGG + chr4_3:42803947-42803966 Msa0641900:five_prime_UTR 50.0%
ACCAGAGGAATCACCAGATG+TGG + chr4_3:42803962-42803981 Msa0641900:five_prime_UTR 50.0%
ACCACATCTGGTGATTCCTC+TGG - chr4_3:42803966-42803985 None:intergenic 50.0%
! GGACCAATCAAGTGCTACTC+AGG + chr4_3:42804689-42804708 Msa0641900:five_prime_UTR 50.0%
AGCCAAGCTTCCATTGGACA+CGG - chr4_3:42805353-42805372 None:intergenic 50.0%
GGGTTACATTAAGGGACGGA+GGG + chr4_3:42805743-42805762 Msa0641900:intron 50.0%
AATCAGAGGGAGGATTGTGG+GGG + chr4_3:42806002-42806021 Msa0641900:intron 50.0%
AGGATTGTGGGGGTGGAAAT+GGG + chr4_3:42806012-42806031 Msa0641900:intron 50.0%
CTTGGCCTAATACCCCTCAT+AGG + chr4_3:42806097-42806116 Msa0641900:intron 50.0%
! CCCTCATAGGCTCATTTTCG+AGG + chr4_3:42806110-42806129 Msa0641900:intron 50.0%
AGCTTAATAGGCCAGCCTGA+TGG + chr4_3:42806412-42806431 Msa0641900:intron 50.0%
GCTTAATAGGCCAGCCTGAT+GGG + chr4_3:42806413-42806432 Msa0641900:intron 50.0%
CATGTTCCCACCCCTAATTG+TGG + chr4_3:42806583-42806602 Msa0641900:intron 50.0%
!! GGAAGTACCACAATTAGGGG+TGG - chr4_3:42806593-42806612 None:intergenic 50.0%
ACTTCCTCTTACAAGGTGGC+CGG + chr4_3:42806607-42806626 Msa0641900:intron 50.0%
!!! CTTTGTTTTTGGTGGTGGCC+GGG + chr4_3:42806723-42806742 Msa0641900:intron 50.0%
!!! TTTGTTTTTGGTGGTGGCCG+GGG + chr4_3:42806724-42806743 Msa0641900:intron 50.0%
AACCTGCATTCGTGTGAGGT+TGG + chr4_3:42807134-42807153 Msa0641900:intron 50.0%
TACCAACCTCACACGAATGC+AGG - chr4_3:42807139-42807158 None:intergenic 50.0%
!! GGGTTTTCGGGCTACTTGAT+CGG + chr4_3:42807728-42807747 Msa0641900:intron 50.0%
AGTCCATTCTACGGGAGTCA+TGG - chr4_3:42807797-42807816 None:intergenic 50.0%
TGGGAAGCAAGTATTCGCCA+TGG + chr4_3:42810341-42810360 Msa0641900:intron 50.0%
TCTCTTGCATGCTGGACCAG+TGG + chr4_3:42802922-42802941 Msa0641900:five_prime_UTR 55.0%
! ACCAGAGTGTCTCAGAGCAC+CGG - chr4_3:42803095-42803114 None:intergenic 55.0%
TCGTCTGTGGCTGCACTGTA+TGG + chr4_3:42803300-42803319 Msa0641900:five_prime_UTR 55.0%
TTCGGGTGTTCCGCCTACAT+AGG + chr4_3:42803572-42803591 Msa0641900:intron 55.0%
TCGGGTGTTCCGCCTACATA+GGG + chr4_3:42803573-42803592 Msa0641900:intron 55.0%
GCCCCTGAGTAGCACTTGAT+TGG - chr4_3:42804695-42804714 None:intergenic 55.0%
GGGGTTACATTAAGGGACGG+AGG + chr4_3:42805742-42805761 Msa0641900:intron 55.0%
GAGGATTGTGGGGGTGGAAA+TGG + chr4_3:42806011-42806030 Msa0641900:intron 55.0%
!! GCCAGCCTGATGGGCTTAAT+AGG + chr4_3:42806422-42806441 Msa0641900:intron 55.0%
GCCTATTAAGCCCATCAGGC+TGG - chr4_3:42806426-42806445 None:intergenic 55.0%
TAAACGAGCTGGGCCGAACT+AGG + chr4_3:42806518-42806537 Msa0641900:intron 55.0%
AAGAGGAGTCCTCGTGAGCT+TGG - chr4_3:42806787-42806806 None:intergenic 55.0%
GGACCATGACTCCCGTAGAA+TGG + chr4_3:42807791-42807810 Msa0641900:intron 55.0%
GCGCGAGAAACCTATAGGGT+GGG + chr4_3:42808142-42808161 Msa0641900:intron 55.0%
ATGAGTGCTTGGCGCATTGC+TGG + chr4_3:42810248-42810267 Msa0641900:CDS 55.0%
CATGCTAACTAGTGCCCCCG+AGG + chr4_3:42802034-42802053 Msa0641900:intron 60.0%
!! ACCGGTGCTCTGAGACACTC+TGG + chr4_3:42803091-42803110 Msa0641900:intron 60.0%
! TTAGGGGTGTGGTGCCCTCA+TGG + chr4_3:42803482-42803501 Msa0641900:intron 60.0%
CGCCGTGTCCAATGGAAGCT+TGG + chr4_3:42805348-42805367 Msa0641900:CDS 60.0%
! TGTGGGGGTGGAAATGGGCT+AGG + chr4_3:42806017-42806036 Msa0641900:intron 60.0%
GGCTCAGGCCTTACAAAGCC+CGG - chr4_3:42806048-42806067 None:intergenic 60.0%
ACATGCCAGACCGTCCGACA+GGG - chr4_3:42806568-42806587 None:intergenic 60.0%
AACATGCCAGACCGTCCGAC+AGG - chr4_3:42806569-42806588 None:intergenic 60.0%
TCCTCTTACAAGGTGGCCGG+AGG + chr4_3:42806610-42806629 Msa0641900:intron 60.0%
CCTCTTACAAGGTGGCCGGA+GGG + chr4_3:42806611-42806630 Msa0641900:intron 60.0%
CCTCGTGAGCTTGGCTCAGT+TGG - chr4_3:42806778-42806797 None:intergenic 60.0%
CCAACTGAGCCAAGCTCACG+AGG + chr4_3:42806775-42806794 Msa0641900:intron 60.0%
GTTGATCCGAGAGGCCCGAA+AGG + chr4_3:42807272-42807291 Msa0641900:intron 60.0%
GGGCGCGCGAGAATCCTATA+GGG - chr4_3:42807363-42807382 None:intergenic 60.0%
AGGGCGCGCGAGAATCCTAT+AGG - chr4_3:42807364-42807383 None:intergenic 60.0%
AGGGCGCGCGAGAAACCTAT+AGG + chr4_3:42808137-42808156 Msa0641900:intron 60.0%
GGGCGCGCGAGAAACCTATA+GGG + chr4_3:42808138-42808157 Msa0641900:intron 60.0%
CGCGCGAGAAACCTATAGGG+TGG + chr4_3:42808141-42808160 Msa0641900:intron 60.0%
CGAAGGGTCGCCGTGTCCAA+TGG + chr4_3:42805340-42805359 Msa0641900:CDS 65.0%
CAGAGGGAGGATTGTGGGGG+TGG + chr4_3:42806005-42806024 Msa0641900:intron 65.0%
!! GGGGTGGAAATGGGCTAGGC+CGG + chr4_3:42806021-42806040 Msa0641900:intron 65.0%
!! GGGTGGAAATGGGCTAGGCC+GGG + chr4_3:42806022-42806041 Msa0641900:intron 65.0%
AGGCCTTACAAAGCCCGGCC+CGG - chr4_3:42806043-42806062 None:intergenic 65.0%
CATGCCAGACCGTCCGACAG+GGG - chr4_3:42806567-42806586 None:intergenic 65.0%
CCCTCCGGCCACCTTGTAAG+AGG - chr4_3:42806614-42806633 None:intergenic 65.0%
TAGGGGCCTTTCGGGCCTCT+CGG - chr4_3:42807281-42807300 None:intergenic 65.0%
!! GGAAATGGGCTAGGCCGGGC+CGG + chr4_3:42806026-42806045 Msa0641900:intron 70.0%
!! GAAATGGGCTAGGCCGGGCC+GGG + chr4_3:42806027-42806046 Msa0641900:intron 70.0%
! AGGCCGGGCCGGGCTTTGTA+AGG + chr4_3:42806037-42806056 Msa0641900:intron 70.0%
GCTAGGCCGTAGGCCCCTGT+CGG + chr4_3:42806551-42806570 Msa0641900:intron 70.0%
GACCGTCCGACAGGGGCCTA+CGG - chr4_3:42806560-42806579 None:intergenic 70.0%
TAGGCCCCTGTCGGACGGTC+TGG + chr4_3:42806560-42806579 Msa0641900:intron 70.0%
GGCCGTAGGCCCCTGTCGGA+CGG + chr4_3:42806555-42806574 Msa0641900:intron 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 42801210 42810881 42801210 ID=Msa0641900;Name=Msa0641900
chr4_3 mRNA 42801210 42810881 42801210 ID=Msa0641900-mRNA-1;Parent=Msa0641900;Name=Msa0641900-mRNA-1;_AED=0.27;_eAED=0.27;_QI=1403|0.63|0.66|0.83|0.90|0.83|12|0|135
chr4_3 exon 42801210 42801285 42801210 ID=Msa0641900-mRNA-1:exon:9705;Parent=Msa0641900-mRNA-1
chr4_3 exon 42802265 42802479 42802265 ID=Msa0641900-mRNA-1:exon:9706;Parent=Msa0641900-mRNA-1
chr4_3 exon 42802814 42803046 42802814 ID=Msa0641900-mRNA-1:exon:9707;Parent=Msa0641900-mRNA-1
chr4_3 exon 42803217 42803436 42803217 ID=Msa0641900-mRNA-1:exon:9708;Parent=Msa0641900-mRNA-1
chr4_3 exon 42803839 42804214 42803839 ID=Msa0641900-mRNA-1:exon:9709;Parent=Msa0641900-mRNA-1
chr4_3 exon 42804307 42804414 42804307 ID=Msa0641900-mRNA-1:exon:9710;Parent=Msa0641900-mRNA-1
chr4_3 exon 42804571 42804771 42804571 ID=Msa0641900-mRNA-1:exon:9711;Parent=Msa0641900-mRNA-1
chr4_3 exon 42805318 42805396 42805318 ID=Msa0641900-mRNA-1:exon:9712;Parent=Msa0641900-mRNA-1
chr4_3 exon 42805843 42805848 42805843 ID=Msa0641900-mRNA-1:exon:9713;Parent=Msa0641900-mRNA-1
chr4_3 exon 42806978 42807151 42806978 ID=Msa0641900-mRNA-1:exon:9714;Parent=Msa0641900-mRNA-1
chr4_3 exon 42810227 42810337 42810227 ID=Msa0641900-mRNA-1:exon:9715;Parent=Msa0641900-mRNA-1
chr4_3 exon 42810870 42810881 42810870 ID=Msa0641900-mRNA-1:exon:9716;Parent=Msa0641900-mRNA-1
chr4_3 five_prime_UTR 42801210 42801285 42801210 ID=Msa0641900-mRNA-1:five_prime_utr;Parent=Msa0641900-mRNA-1
chr4_3 five_prime_UTR 42802265 42802479 42802265 ID=Msa0641900-mRNA-1:five_prime_utr;Parent=Msa0641900-mRNA-1
chr4_3 five_prime_UTR 42802814 42803046 42802814 ID=Msa0641900-mRNA-1:five_prime_utr;Parent=Msa0641900-mRNA-1
chr4_3 five_prime_UTR 42803217 42803436 42803217 ID=Msa0641900-mRNA-1:five_prime_utr;Parent=Msa0641900-mRNA-1
chr4_3 five_prime_UTR 42803839 42804214 42803839 ID=Msa0641900-mRNA-1:five_prime_utr;Parent=Msa0641900-mRNA-1
chr4_3 five_prime_UTR 42804307 42804414 42804307 ID=Msa0641900-mRNA-1:five_prime_utr;Parent=Msa0641900-mRNA-1
chr4_3 five_prime_UTR 42804571 42804745 42804571 ID=Msa0641900-mRNA-1:five_prime_utr;Parent=Msa0641900-mRNA-1
chr4_3 CDS 42804746 42804771 42804746 ID=Msa0641900-mRNA-1:cds;Parent=Msa0641900-mRNA-1
chr4_3 CDS 42805318 42805396 42805318 ID=Msa0641900-mRNA-1:cds;Parent=Msa0641900-mRNA-1
chr4_3 CDS 42805843 42805848 42805843 ID=Msa0641900-mRNA-1:cds;Parent=Msa0641900-mRNA-1
chr4_3 CDS 42806978 42807151 42806978 ID=Msa0641900-mRNA-1:cds;Parent=Msa0641900-mRNA-1
chr4_3 CDS 42810227 42810337 42810227 ID=Msa0641900-mRNA-1:cds;Parent=Msa0641900-mRNA-1
chr4_3 CDS 42810870 42810881 42810870 ID=Msa0641900-mRNA-1:cds;Parent=Msa0641900-mRNA-1
Gene Sequence

>Msa0641900

ATGCTTTATGCAGCAAAAATGTACAGGGATGAGCTGAAAGAGCTTGAACGAAGGGTCGCCGTGTCCAATGGAAGCTTGGCTCTATCACCAATCAATACTCCAAAGAAAAATATATGGTTAGTTGGAGATGAATGGGATGAAGATGAGCAAATGCAAGCATCAGAAGGATCATTGTTCATACCTTTTTCTCATTTTCCTCCAAAGAAAATGCGAAAAGGTTGCTTCTACCACTATACACCATCAATGATAAGTCCTACTGCAGTCATAAACCTGCATTCGTGTGAGAATTGGCTTCCAAGAAGAGTCATGAGTGCTTGGCGCATTGCTGGAATAATTCATGCCTTAGAAAGATGGAATGTTCATGAGTGTGGTGACACTGTATTTGACATTGAGAAATACATTTTATGA
Protein sequence

>Msa0641900

MLYAAKMYRDELKELERRVAVSNGSLALSPINTPKKNIWLVGDEWDEDEQMQASEGSLFIPFSHFPPKKMRKGCFYHYTPSMISPTAVINLHSCENWLPRRVMSAWRIAGIIHALERWNVHECGDTVFDIEKYIL*