AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0867050


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0867050 MtrunA17_Chr4g0070991 84.584 493 18 3 1 492 1 436 0.0 822
Msa0867050 MtrunA17_Chr2g0299671 63.911 496 97 9 21 492 29 466 0.0 611
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0867050 AT2G19450.1 65.686 408 76 4 85 492 105 448 0.0 536

Find 136 sgRNAs with CRISPR-Local

Find 501 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAAGCCTGGCCTACTTTA+TGG 0.102319 5_4:-69711483 Msa0867050:CDS
GATGCAAAATCTGTTATATT+TGG 0.139686 5_4:+69715323 None:intergenic
TATAGAATGTTTCCCTTAAA+AGG 0.165077 5_4:+69710252 None:intergenic
GAAGGGACAAGCAAAATATT+TGG 0.254717 5_4:+69709121 None:intergenic
CTATGAAACAACAAAATAAC+TGG 0.271556 5_4:-69715746 None:intergenic
ATAATATTTACTGGAGTTAT+GGG 0.300470 5_4:-69710483 Msa0867050:CDS
TGAATCTAGGTTGAATATAT+TGG 0.302386 5_4:-69709413 Msa0867050:intron
GTCAAGCTGATAATATTTAC+TGG 0.305250 5_4:-69710492 Msa0867050:CDS
GATAATATTTACTGGAGTTA+TGG 0.318190 5_4:-69710484 Msa0867050:CDS
AATTGGCAGCAGCGATGTTT+TGG 0.324920 5_4:+69715045 None:intergenic
GTTCAAAATCATTGAGAGAT+TGG 0.327935 5_4:-69713692 Msa0867050:CDS
TCTACTGCTTCTTCCACCTT+TGG 0.347716 5_4:-69710170 Msa0867050:intron
CGTTGAGAACCGTTGGGTTC+CGG 0.353692 5_4:+69715204 None:intergenic
CCCTTCCATTCGAAAGGGTT+GGG 0.357388 5_4:-69710529 Msa0867050:CDS
ATTTATTTATTTATTTATAT+AGG 0.360069 5_4:+69715558 None:intergenic
TTGGCAGAGCTTCTTCGATT+TGG 0.360389 5_4:-69709394 Msa0867050:CDS
GTGGGGTATTTATTGTTTGT+GGG 0.366005 5_4:+69715485 None:intergenic
GACCTGAGGATTACTAAAAT+AGG 0.367816 5_4:+69713249 None:intergenic
TGCTACTTGCTTGCATTGTA+TGG 0.370577 5_4:-69711981 Msa0867050:CDS
GCATATTCCATGTGAGTATT+GGG 0.384799 5_4:+69711521 None:intergenic
TCCTTTGGCGGCCTTTATAG+TGG 0.384946 5_4:-69713535 Msa0867050:CDS
GGTGGGGTATTTATTGTTTG+TGG 0.386473 5_4:+69715484 None:intergenic
GTATTGGAGGATGTGGAATA+TGG 0.390765 5_4:-69709207 Msa0867050:CDS
CAGAGCCACACATATAGATT+TGG 0.393170 5_4:+69710198 None:intergenic
TAGTCTTGCAATATTTCCTT+TGG 0.398091 5_4:-69713550 Msa0867050:CDS
CAGACTTTACTTAAACTTGA+AGG 0.399610 5_4:+69715705 None:intergenic
GGTTGATTAAGACTGGCTTT+TGG 0.406433 5_4:-69713719 Msa0867050:CDS
TTCAAGTTGTGGGCGTTTAG+TGG 0.408945 5_4:-69707464 None:intergenic
TTGCATTGTATGGTTAAAAC+TGG 0.410660 5_4:-69711971 Msa0867050:CDS
TGCATATTCCATGTGAGTAT+TGG 0.413902 5_4:+69711520 None:intergenic
CGAATCATCCATTTGTGAAC+AGG 0.426743 5_4:+69708892 None:intergenic
TTGCCACATATTCAAGTTGT+GGG 0.429494 5_4:-69707474 Msa0867050:CDS
CCCCTTCCATTCGAAAGGGT+TGG 0.437480 5_4:-69710530 Msa0867050:CDS
TGAGACAGGTTCGCTAATGC+AGG 0.441272 5_4:+69715416 None:intergenic
AATTTAATCGAAGAAATATC+AGG 0.447275 5_4:+69715005 None:intergenic
GAAGGGGTGCGAGGATATCT+TGG 0.450792 5_4:+69710546 None:intergenic
ATAAAATAAAAGATCGTTTG+AGG 0.454391 5_4:-69715286 Msa0867050:five_prime_UTR
TCTTGCAATATTTCCTTTGG+CGG 0.454969 5_4:-69713547 Msa0867050:CDS
TACGGTTGGTTGATTAAGAC+TGG 0.460510 5_4:-69713726 Msa0867050:CDS
ACTTACAAATTCAATTGAAA+AGG 0.469129 5_4:-69711914 Msa0867050:intron
TTCCTTTGAACATGTCTATG+AGG 0.470837 5_4:-69709096 Msa0867050:CDS
CTTGCCACATATTCAAGTTG+TGG 0.472541 5_4:-69707475 Msa0867050:CDS
CAGCTTCAGAACTCTTTCAA+TGG 0.473289 5_4:+69710227 None:intergenic
TGTTTCCCTTAAAAGGATGC+TGG 0.475871 5_4:+69710259 None:intergenic
TCCTCAGACATGGAAAATAT+AGG 0.477175 5_4:+69708866 None:intergenic
GACATGTTCAAAGGAATTGA+AGG 0.481380 5_4:+69709103 None:intergenic
GAATCGTCTGCCACGGTGGA+AGG 0.484354 5_4:-69715128 Msa0867050:CDS
TATCATTGAGAATTTAATGA+AGG 0.486505 5_4:-69714227 Msa0867050:intron
ATCGGACGTTTACTTTACTT+TGG 0.486645 5_4:+69715257 None:intergenic
TGTTGCAGCCTGTTCACAAA+TGG 0.490462 5_4:-69708900 Msa0867050:intron
CGCACCCCTTCCATTCGAAA+GGG 0.495380 5_4:-69710534 Msa0867050:CDS
TTTATTTATTTATATAGGAA+AGG 0.497180 5_4:+69715563 None:intergenic
ACGGTGGAAGGCGAGAGTTC+CGG 0.499518 5_4:-69715116 Msa0867050:CDS
AAAGCAAAAGGAGTAGTCAC+AGG 0.506292 5_4:-69709062 Msa0867050:CDS
GGCCTTTATAGTGGAAAAGT+TGG 0.508985 5_4:-69713526 Msa0867050:CDS
GAGCACATGCGAAGCGAAGA+AGG 0.509461 5_4:+69715632 None:intergenic
AACCTGACGGAAAATGTTAT+CGG 0.510027 5_4:+69714926 None:intergenic
GCTATGTTACAGAAAGCAAA+AGG 0.515169 5_4:-69709074 Msa0867050:CDS
ATCCTTCACCGACTCTTCAC+CGG 0.518020 5_4:+69715097 None:intergenic
TTATGTAAGCTTCAAAAGCC+TGG 0.519195 5_4:-69711495 Msa0867050:CDS
GAGGAGTCGTTGAGAACCGT+TGG 0.519542 5_4:+69715197 None:intergenic
TTACGATGAGCGGGAACAGA+AGG 0.520023 5_4:+69714972 None:intergenic
GCCATCAGTATTGGAGGATG+TGG 0.524661 5_4:-69709214 Msa0867050:intron
TGCTCCTACGTTATGTTACC+AGG 0.526894 5_4:-69711459 Msa0867050:intron
CATGCGAAGCGAAGAAGGTA+AGG 0.526970 5_4:+69715637 None:intergenic
ACCCAACCCTTTCGAATGGA+AGG 0.531700 5_4:+69710528 None:intergenic
AATCAGTTGCAGAGTCATGC+TGG 0.534169 5_4:-69714298 Msa0867050:intron
GAGCAACCATAAAGTAGGCC+AGG 0.534701 5_4:+69711477 None:intergenic
GATTCGAATTCGAATAGTAA+AGG 0.536571 5_4:+69715460 None:intergenic
ACTGCTGCCATCAGTATTGG+AGG 0.536832 5_4:-69709220 Msa0867050:intron
TCGCACCCCTTCCATTCGAA+AGG 0.538191 5_4:-69710535 Msa0867050:CDS
ACGCCCACAACTTGAATATG+TGG 0.541477 5_4:+69707471 None:intergenic
GACGGCACCGTGAGGGTCGT+CGG 0.542876 5_4:+69715226 None:intergenic
GTTTCCCTTAAAAGGATGCT+GGG 0.543462 5_4:+69710260 None:intergenic
TGGGGTATTTATTGTTTGTG+GGG 0.544117 5_4:+69715486 None:intergenic
TCCCGCTCATCGTAAAATCA+AGG 0.547682 5_4:-69714964 Msa0867050:CDS
CGTAGGAGCAACCATAAAGT+AGG 0.548280 5_4:+69711472 None:intergenic
CTTCTTCGAATCGTCTGCCA+CGG 0.559270 5_4:-69715135 Msa0867050:CDS
GACATTACCAACACATGAAG+AGG 0.559412 5_4:+69713667 None:intergenic
TATTAATAGAGAGTTGAGAC+AGG 0.563429 5_4:+69715402 None:intergenic
ATTGGCCCCTCTTCATGTGT+TGG 0.564337 5_4:-69713674 Msa0867050:intron
GTCAGTGCCGATAGAGTCAT+CGG 0.569995 5_4:+69715067 None:intergenic
TCCACTATAAAGGCCGCCAA+AGG 0.571464 5_4:+69713534 None:intergenic
ATTCGAATAGTAAAGGTGGT+GGG 0.573015 5_4:+69715467 None:intergenic
GTAAAGTCTGTGGTACGTGC+GGG 0.575092 5_4:-69715692 Msa0867050:five_prime_UTR
AGGAGTCGTTGAGAACCGTT+GGG 0.575988 5_4:+69715198 None:intergenic
AATTCGAATAGTAAAGGTGG+TGG 0.577824 5_4:+69715466 None:intergenic
TTCCGGTGAAGAGTCGGTGA+AGG 0.582558 5_4:-69715099 Msa0867050:CDS
TCTAGTTCCGATGACTCTAT+CGG 0.584171 5_4:-69715074 Msa0867050:CDS
CCCAACCCTTTCGAATGGAA+GGG 0.586326 5_4:+69710529 None:intergenic
AAGAGATGGAATACCAAAGG+TGG 0.589844 5_4:+69710157 None:intergenic
TTCGAATAGTAAAGGTGGTG+GGG 0.589950 5_4:+69715468 None:intergenic
GGAAACTACAGAAGCAACAA+TGG 0.592491 5_4:+69709031 None:intergenic
CTACTATACAGAGGTTGAAG+AGG 0.600310 5_4:+69714275 None:intergenic
CTGTTCCAAATCTATATGTG+TGG 0.600615 5_4:-69710203 Msa0867050:CDS
CGAGAGTTCCGGTGAAGAGT+CGG 0.602185 5_4:-69715105 Msa0867050:CDS
CGAAGCGAAGAAGGTAAGGT+GGG 0.607493 5_4:+69715641 None:intergenic
ACATTACCAACACATGAAGA+GGG 0.608800 5_4:+69713668 None:intergenic
GCGAAGCGAAGAAGGTAAGG+TGG 0.609276 5_4:+69715640 None:intergenic
TAACACCCAACCCTTTCGAA+TGG 0.610126 5_4:+69710524 None:intergenic
GGTTCCGGACGGCACCGTGA+GGG 0.610138 5_4:+69715219 None:intergenic
AGTAAAGTCTGTGGTACGTG+CGG 0.610447 5_4:-69715693 Msa0867050:five_prime_UTR
CCAACCCTTTCGAATGGAAG+GGG 0.615118 5_4:+69710530 None:intergenic
GGGTGAATGCAGCAAAGCAA+AGG 0.615745 5_4:+69715661 None:intergenic
TTCGAAGAAGCCGCTGACGG+AGG 0.616528 5_4:+69715148 None:intergenic
ACATGTTCAAAGGAATTGAA+GGG 0.622490 5_4:+69709104 None:intergenic
GAATGCAAGAACTGTTGAAG+AGG 0.622975 5_4:-69709344 Msa0867050:intron
GGGTTCCGGACGGCACCGTG+AGG 0.624853 5_4:+69715218 None:intergenic
AGCCTCATAGACATGTTCAA+AGG 0.626181 5_4:+69709094 None:intergenic
GGTATACCAGTCCTCAGACA+TGG 0.627497 5_4:+69708856 None:intergenic
AGAGTTATACAAGTTTCTCA+CGG 0.634529 5_4:-69707536 Msa0867050:CDS
GGTTTCTGCTTTGTTCCATG+AGG 0.636622 5_4:-69707776 Msa0867050:intron
CACAACTTGAATATGTGGCA+AGG 0.637365 5_4:+69707476 None:intergenic
GAGACAGGTTCGCTAATGCA+GGG 0.637843 5_4:+69715417 None:intergenic
TCGAATTCGAATAGTAAAGG+TGG 0.638976 5_4:+69715463 None:intergenic
GTCTGCTGTTCACTGCAACA+AGG 0.639453 5_4:+69714251 None:intergenic
TTTCGAATGGAAGGGGTGCG+AGG 0.641294 5_4:+69710537 None:intergenic
GAACAAAGCAGAAACCATGA+AGG 0.644488 5_4:+69707783 None:intergenic
GAATGCAGCAAAGCAAAGGA+AGG 0.645118 5_4:+69715665 None:intergenic
TCTGAGGACTGGTATACCAA+AGG 0.652186 5_4:-69708851 Msa0867050:intron
TCAAGTTTAAGTAAAGTCTG+TGG 0.652679 5_4:-69715702 Msa0867050:five_prime_UTR
CTTCGAATCGTCTGCCACGG+TGG 0.653441 5_4:-69715132 Msa0867050:CDS
AAGCAAAAGGAGTAGTCACA+GGG 0.653912 5_4:-69709061 Msa0867050:CDS
AAAGTAAAGTAAACGTCCGA+TGG 0.656329 5_4:-69715255 Msa0867050:exon
CGATTCGAAGAAGCCGCTGA+CGG 0.657388 5_4:+69715145 None:intergenic
TATGAAACAACAAAATAACT+GGG 0.662884 5_4:-69715745 None:intergenic
TATAATCATTGCAACAACTG+CGG 0.672463 5_4:-69713280 Msa0867050:CDS
AGCGCTTCCCAATACTCACA+TGG 0.675287 5_4:-69711528 Msa0867050:CDS
CTGAGTGCAGCTGTGCATCG+CGG 0.700113 5_4:-69707501 Msa0867050:CDS
GATGAGCGGGAACAGAAGGA+CGG 0.707063 5_4:+69714976 None:intergenic
GCTACCTGGTAACATAACGT+AGG 0.709981 5_4:+69711455 None:intergenic
CAACAAGGACTACTATACAG+AGG 0.712127 5_4:+69714266 None:intergenic
CATTACCAACACATGAAGAG+GGG 0.715726 5_4:+69713669 None:intergenic
CGGTCTGCGACGTAAAACAG+AGG 0.728316 5_4:+69715178 None:intergenic
GGAACTCTCGCCTTCCACCG+TGG 0.744840 5_4:+69715118 None:intergenic
AAAATGTTATCGGAGCTGAG+TGG 0.746573 5_4:+69714936 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTATTTATTTATTTATAT+AGG + chr5_4:69707650-69707669 None:intergenic 0.0%
!! AATTATAATATAATTTAAAA+AGG - chr5_4:69714765-69714784 Msa0867050:intron 0.0%
!! ATTATAATATAATTTAAAAA+GGG - chr5_4:69714766-69714785 Msa0867050:intron 0.0%
!! TTTATTTATTTATATAGGAA+AGG + chr5_4:69707645-69707664 None:intergenic 10.0%
!! AAAACTAAAATAAAATAAGA+TGG + chr5_4:69712502-69712521 None:intergenic 10.0%
!! GTATAAGTAATTTAACATAT+TGG + chr5_4:69708377-69708396 None:intergenic 15.0%
!!! AACTTTTTATAAAATAGCAA+TGG + chr5_4:69708614-69708633 None:intergenic 15.0%
!!! ATTGTTTCTATATAAGTTAT+AGG - chr5_4:69709175-69709194 Msa0867050:CDS 15.0%
!!! ATTTCAAAAAACTTTGAAAA+CGG + chr5_4:69709345-69709364 None:intergenic 15.0%
!!! TGAAAATTATTTTAGCTATA+AGG + chr5_4:69709800-69709819 None:intergenic 15.0%
!!! AAATAATTTTCAAATGATGT+AGG - chr5_4:69709808-69709827 Msa0867050:intron 15.0%
!!! TTTTAAATTTTTGATAGACT+CGG + chr5_4:69710638-69710657 None:intergenic 15.0%
!! AATGTCTAGAAAATTATTAT+TGG - chr5_4:69710736-69710755 Msa0867050:intron 15.0%
!! TAAAAGTTAAGAATAAAATG+TGG + chr5_4:69710897-69710916 None:intergenic 15.0%
!!! ATCAATTTTCCTTATTTATT+TGG + chr5_4:69710961-69710980 None:intergenic 15.0%
!! TCTGGTTATTATATATATTT+AGG - chr5_4:69712373-69712392 Msa0867050:intron 15.0%
!! CTGGTTATTATATATATTTA+GGG - chr5_4:69712374-69712393 Msa0867050:intron 15.0%
!! TGGTTATTATATATATTTAG+GGG - chr5_4:69712375-69712394 Msa0867050:intron 15.0%
!!! AATTTTTTCTCTCAAATTTA+CGG + chr5_4:69713139-69713158 None:intergenic 15.0%
!!! TTATTTTTATAGTCTATCAT+TGG - chr5_4:69713401-69713420 Msa0867050:intron 15.0%
!!! AAATTTTATTCTACTAAGTA+GGG + chr5_4:69713457-69713476 None:intergenic 15.0%
!!! TAAATTTTATTCTACTAAGT+AGG + chr5_4:69713458-69713477 None:intergenic 15.0%
!! GAATTTATAGAAGAAAAAAA+AGG + chr5_4:69713633-69713652 None:intergenic 15.0%
!! AAATAAACAACAATGTATTA+AGG + chr5_4:69713898-69713917 None:intergenic 15.0%
!! AAATAATCTTAGTAAAAGAA+TGG + chr5_4:69713930-69713949 None:intergenic 15.0%
!! AAAATGAAAAATTTAGACAT+TGG + chr5_4:69714793-69714812 None:intergenic 15.0%
!! TGAAAATAAAAAATGAAAGA+AGG - chr5_4:69714867-69714886 Msa0867050:intron 15.0%
!! AATTATGGTATAAACAAAAA+GGG + chr5_4:69715496-69715515 None:intergenic 15.0%
!! AAATTATGGTATAAACAAAA+AGG + chr5_4:69715497-69715516 None:intergenic 15.0%
!! ATAAAATAAAAGATCGTTTG+AGG - chr5_4:69707919-69707938 Msa0867050:intron 20.0%
!! AATTTAATCGAAGAAATATC+AGG + chr5_4:69708203-69708222 None:intergenic 20.0%
!! GTTAAATTACTTATACTGTT+TGG - chr5_4:69708381-69708400 Msa0867050:intron 20.0%
!! CATTAATTGATACTAACAAT+TGG + chr5_4:69708788-69708807 None:intergenic 20.0%
!! TATCATTGAGAATTTAATGA+AGG - chr5_4:69708978-69708997 Msa0867050:intron 20.0%
!!! AAAAGTTGATCATATTAAAG+AGG + chr5_4:69709019-69709038 None:intergenic 20.0%
!!! ATTAAGATTTTTATCCAAAC+AGG + chr5_4:69709057-69709076 None:intergenic 20.0%
!! AAAATGAACTATCAAACTTA+GGG + chr5_4:69709423-69709442 None:intergenic 20.0%
!! AAAAATGAACTATCAAACTT+AGG + chr5_4:69709424-69709443 None:intergenic 20.0%
!! AAAAAATCACACATTGAAAA+GGG + chr5_4:69709450-69709469 None:intergenic 20.0%
!!! TTTATTTTGAAGAATGAGTT+AGG - chr5_4:69709577-69709596 Msa0867050:intron 20.0%
!!! ATATTCTTCTGAATAGATTT+TGG - chr5_4:69709994-69710013 Msa0867050:intron 20.0%
!! TTATAAAAAAGTGGGAAAAT+AGG + chr5_4:69710241-69710260 None:intergenic 20.0%
!! AATGGTAGTTATAAAAAAGT+GGG + chr5_4:69710249-69710268 None:intergenic 20.0%
!! ATGTAATAAATAGGAAGAAT+TGG - chr5_4:69710440-69710459 Msa0867050:intron 20.0%
!! TGTAATAAATAGGAAGAATT+GGG - chr5_4:69710441-69710460 Msa0867050:intron 20.0%
!! TTATTATTGGAAAGTTGAAA+TGG - chr5_4:69710749-69710768 Msa0867050:intron 20.0%
!!! AAAATTTTGATAGACTCAAA+TGG + chr5_4:69710815-69710834 None:intergenic 20.0%
!! TGTATCATATTAGGAAAATA+AGG + chr5_4:69711025-69711044 None:intergenic 20.0%
!!! TTATTTTCCTAATATGATAC+AGG - chr5_4:69711024-69711043 Msa0867050:intron 20.0%
!! ACTTACAAATTCAATTGAAA+AGG - chr5_4:69711291-69711310 Msa0867050:intron 20.0%
!! ATAGCTATCTAACAAATTAA+AGG + chr5_4:69711333-69711352 None:intergenic 20.0%
!! TTTGTAGAATAAAATACTTC+AGG - chr5_4:69711374-69711393 Msa0867050:intron 20.0%
!! TGGAAAGATAAGTTAATAAT+TGG + chr5_4:69712100-69712119 None:intergenic 20.0%
!! TATTAACTTATCTTTCCATT+TGG - chr5_4:69712102-69712121 Msa0867050:intron 20.0%
!!! ATGTTACGTTTATATTTTCA+TGG + chr5_4:69712441-69712460 None:intergenic 20.0%
!!! TATTTTAGTTTTGATATCCT+AGG - chr5_4:69712510-69712529 Msa0867050:intron 20.0%
!! ATAATATTTACTGGAGTTAT+GGG - chr5_4:69712722-69712741 Msa0867050:intron 20.0%
!! ACTAACACAATTTATTATCA+AGG + chr5_4:69712773-69712792 None:intergenic 20.0%
!! ATAGAACAACTTAAACATAA+AGG + chr5_4:69712811-69712830 None:intergenic 20.0%
!!! GTTTCATTTGTTTAATGTTT+TGG - chr5_4:69713163-69713182 Msa0867050:intron 20.0%
!! TAGAATCATTTATTAACAGT+AGG + chr5_4:69714198-69714217 None:intergenic 20.0%
!!! TGGTTTTTATTACTTTTAAG+TGG - chr5_4:69714242-69714261 Msa0867050:CDS 20.0%
!!! TATTTTCAATCCATTTTCTT+TGG + chr5_4:69714855-69714874 None:intergenic 20.0%
!! TTGAAAGGATTATTAATTCA+GGG + chr5_4:69714920-69714939 None:intergenic 20.0%
!! TTTGAAAGGATTATTAATTC+AGG + chr5_4:69714921-69714940 None:intergenic 20.0%
!!! ATTAATATTTGCATTTTGCA+GGG + chr5_4:69714948-69714967 None:intergenic 20.0%
!!! AATATTAATCACTTGACTTT+TGG - chr5_4:69714959-69714978 Msa0867050:CDS 20.0%
!!! TTTTTATCATCTTATTGTAC+AGG - chr5_4:69715381-69715400 Msa0867050:five_prime_UTR 20.0%
!!! TTTTATCATCTTATTGTACA+GGG - chr5_4:69715382-69715401 Msa0867050:five_prime_UTR 20.0%
!!! TTTACATGCATACTTTTATT+AGG + chr5_4:69715615-69715634 None:intergenic 20.0%
! GATGCAAAATCTGTTATATT+TGG + chr5_4:69707885-69707904 None:intergenic 25.0%
!! ATTGGTAACAGTTGATATAA+GGG + chr5_4:69708359-69708378 None:intergenic 25.0%
!! TATTGGTAACAGTTGATATA+AGG + chr5_4:69708360-69708379 None:intergenic 25.0%
! TGTTCTTCATTAATGTGAAA+AGG - chr5_4:69708715-69708734 Msa0867050:intron 25.0%
!! ATGCTTTGAATTGAATAGAA+TGG - chr5_4:69708805-69708824 Msa0867050:intron 25.0%
! TTTCTATATAAGTTATAGGC+TGG - chr5_4:69709179-69709198 Msa0867050:CDS 25.0%
! TTTAATTAGCTATGTAGAAG+AGG - chr5_4:69709202-69709221 Msa0867050:CDS 25.0%
! CAAAAAATCACACATTGAAA+AGG + chr5_4:69709451-69709470 None:intergenic 25.0%
!!! ATTTTAGCTATAAGGAAACA+AGG + chr5_4:69709792-69709811 None:intergenic 25.0%
! ACATTTCTGATTAAACTATC+AGG - chr5_4:69710049-69710068 Msa0867050:intron 25.0%
! AATTAGTGTATCATATTCTG+AGG + chr5_4:69710141-69710160 None:intergenic 25.0%
! AATATGATACACTAATTCCT+AGG - chr5_4:69710144-69710163 Msa0867050:intron 25.0%
! CAATGGTAGTTATAAAAAAG+TGG + chr5_4:69710250-69710269 None:intergenic 25.0%
! TGTAACAGAATAACATACAA+TGG + chr5_4:69710267-69710286 None:intergenic 25.0%
!! ATATGGGATTAAAGTTTTCA+GGG + chr5_4:69710300-69710319 None:intergenic 25.0%
!! AATATGGGATTAAAGTTTTC+AGG + chr5_4:69710301-69710320 None:intergenic 25.0%
! TTACATTAGAAAAAGTAAGC+AGG + chr5_4:69710326-69710345 None:intergenic 25.0%
!!! AGTATTTGTTTTTAGCATGT+CGG - chr5_4:69710708-69710727 Msa0867050:intron 25.0%
! TCAGACTTGGAAATTATTAT+CGG - chr5_4:69710922-69710941 Msa0867050:intron 25.0%
! TTATTATCGGAAAGTTGAAA+TGG - chr5_4:69710935-69710954 Msa0867050:intron 25.0%
! TTGAAATGGCCAAATAAATA+AGG - chr5_4:69710949-69710968 Msa0867050:intron 25.0%
! AAAAAATTGAAAACAAGAGC+AGG - chr5_4:69710994-69711013 Msa0867050:intron 25.0%
! TCATATTAGGAAAATAAGGA+AGG + chr5_4:69711021-69711040 None:intergenic 25.0%
! AAAGTAAAGATGACTACTTT+AGG - chr5_4:69711086-69711105 Msa0867050:intron 25.0%
! AAGTAAAGATGACTACTTTA+GGG - chr5_4:69711087-69711106 Msa0867050:intron 25.0%
!!! TTTTGTCACTTCAATAGATA+AGG - chr5_4:69711135-69711154 Msa0867050:intron 25.0%
!!! GTGATATTCAGTTTTAAAAC+AGG - chr5_4:69711421-69711440 Msa0867050:intron 25.0%
! AATATCACCAGAAGTAAATT+TGG + chr5_4:69711852-69711871 None:intergenic 25.0%
! TTCAGTATGGAATATGTTTA+AGG - chr5_4:69711937-69711956 Msa0867050:CDS 25.0%
! GATAATATTTACTGGAGTTA+TGG - chr5_4:69712721-69712740 Msa0867050:intron 25.0%
! TTAAACATAAAGGAACAGAA+CGG + chr5_4:69712801-69712820 None:intergenic 25.0%
! TCAAAATAGAACAACTTAGT+TGG + chr5_4:69712845-69712864 None:intergenic 25.0%
! TATAGAATGTTTCCCTTAAA+AGG + chr5_4:69712956-69712975 None:intergenic 25.0%
! ATGTTTAACTGAATAAGAGA+TGG + chr5_4:69713065-69713084 None:intergenic 25.0%
! AATTTAATAGCTGTTGTCTT+TGG - chr5_4:69713472-69713491 Msa0867050:intron 25.0%
!!! TATGTTTTAGTTGTGGATAT+TGG - chr5_4:69713700-69713719 Msa0867050:CDS 25.0%
!! TATTTGAAGCAATTTATCCA+TGG - chr5_4:69713760-69713779 Msa0867050:intron 25.0%
!! ATTTGAAGCAATTTATCCAT+GGG - chr5_4:69713761-69713780 Msa0867050:intron 25.0%
!! TGAATCTAGGTTGAATATAT+TGG - chr5_4:69713792-69713811 Msa0867050:intron 25.0%
! GAGATAACAAAAACAAAGAA+AGG + chr5_4:69714065-69714084 None:intergenic 25.0%
!!! TTTTAGACTGAAAAAGTACA+GGG + chr5_4:69714412-69714431 None:intergenic 25.0%
!!! TTTTTAGACTGAAAAAGTAC+AGG + chr5_4:69714413-69714432 None:intergenic 25.0%
!!! TGTGAATGGATTTTCTTTTT+TGG - chr5_4:69714439-69714458 Msa0867050:intron 25.0%
!! ATTATCTGAAATGACAGAAT+AGG + chr5_4:69714713-69714732 None:intergenic 25.0%
!! GATTAATATTTGCATTTTGC+AGG + chr5_4:69714949-69714968 None:intergenic 25.0%
! CTATGATAATTGTTCTTCAT+TGG - chr5_4:69715275-69715294 Msa0867050:five_prime_UTR 25.0%
!!! CTTCATTGGTTGATATTTTT+TGG - chr5_4:69715289-69715308 Msa0867050:five_prime_UTR 25.0%
!!! TTGGTTGATATTTTTTGGAT+TGG - chr5_4:69715294-69715313 Msa0867050:five_prime_UTR 25.0%
! AGAGCTCAAGAAAAAAAAAA+TGG + chr5_4:69715341-69715360 None:intergenic 25.0%
CAGACTTTACTTAAACTTGA+AGG + chr5_4:69707503-69707522 None:intergenic 30.0%
TCAAGTTTAAGTAAAGTCTG+TGG - chr5_4:69707503-69707522 Msa0867050:CDS 30.0%
GATTCGAATTCGAATAGTAA+AGG + chr5_4:69707748-69707767 None:intergenic 30.0%
TATTAATAGAGAGTTGAGAC+AGG + chr5_4:69707806-69707825 None:intergenic 30.0%
!! CACTTGATTTTGATCAGAAT+TGG + chr5_4:69708180-69708199 None:intergenic 30.0%
ACAATACGAGCTTAGATTAA+CGG + chr5_4:69708309-69708328 None:intergenic 30.0%
!! ATTGCAATTTTTCAGTCTCA+TGG + chr5_4:69708451-69708470 None:intergenic 30.0%
!! TGCATGTTTGTTATCATGAT+AGG - chr5_4:69708546-69708565 Msa0867050:intron 30.0%
!! GTTTGTTATCATGATAGGAT+AGG - chr5_4:69708551-69708570 Msa0867050:intron 30.0%
TTATCATGATAGGATAGGAT+AGG - chr5_4:69708556-69708575 Msa0867050:intron 30.0%
AGTAAAGAAATACAGTTACC+TGG + chr5_4:69708879-69708898 None:intergenic 30.0%
TTGATCATATTAAAGAGGAG+AGG + chr5_4:69709014-69709033 None:intergenic 30.0%
TTATCCAAACAGGATCTTAA+TGG + chr5_4:69709047-69709066 None:intergenic 30.0%
TATAGCACAATCACTTATCA+TGG - chr5_4:69709085-69709104 Msa0867050:CDS 30.0%
!!! TGATTTTTTGTTCTGCAGTA+CGG - chr5_4:69709461-69709480 Msa0867050:intron 30.0%
GTTCAAAATCATTGAGAGAT+TGG - chr5_4:69709513-69709532 Msa0867050:intron 30.0%
! TAGTCTTGCAATATTTCCTT+TGG - chr5_4:69709655-69709674 Msa0867050:intron 30.0%
TTTGAATTCTGATAGCTTAC+AGG + chr5_4:69709728-69709747 None:intergenic 30.0%
TATAATCATTGCAACAACTG+CGG - chr5_4:69709925-69709944 Msa0867050:intron 30.0%
!!! ATCCTATTTTAGTAATCCTC+AGG - chr5_4:69709954-69709973 Msa0867050:intron 30.0%
AAAAGTAAGCAGGACAATAT+GGG + chr5_4:69710316-69710335 None:intergenic 30.0%
AAAAAGTAAGCAGGACAATA+TGG + chr5_4:69710317-69710336 None:intergenic 30.0%
CTAATGTAAAACTTCTGTAC+TGG - chr5_4:69710337-69710356 Msa0867050:intron 30.0%
CTAACTAACTAAAGGACTTA+TGG + chr5_4:69710406-69710425 None:intergenic 30.0%
TAAGTCCTTTAGTTAGTTAG+TGG - chr5_4:69710406-69710425 Msa0867050:intron 30.0%
AAGTCCTTTAGTTAGTTAGT+GGG - chr5_4:69710407-69710426 Msa0867050:intron 30.0%
GAGGATGTGATGTAATAAAT+AGG - chr5_4:69710431-69710450 Msa0867050:intron 30.0%
GGAAGAATTGGGAAATAAAA+AGG - chr5_4:69710452-69710471 Msa0867050:intron 30.0%
TAATTGAGATATGAAGCTCT+TGG - chr5_4:69710673-69710692 Msa0867050:intron 30.0%
AATTGAGATATGAAGCTCTT+GGG - chr5_4:69710674-69710693 Msa0867050:intron 30.0%
TGATAGACTCAAATGGTATT+GGG + chr5_4:69710808-69710827 None:intergenic 30.0%
TTGATAGACTCAAATGGTAT+TGG + chr5_4:69710809-69710828 None:intergenic 30.0%
! AACTTTTATCATGTCAGACT+TGG - chr5_4:69710909-69710928 Msa0867050:intron 30.0%
TTGCATTGTATGGTTAAAAC+TGG - chr5_4:69711234-69711253 Msa0867050:intron 30.0%
GCTATCTAACAAATTAAAGG+TGG + chr5_4:69711330-69711349 None:intergenic 30.0%
GAATAAAATACTTCAGGATG+AGG - chr5_4:69711380-69711399 Msa0867050:intron 30.0%
ATTTACTAAGCTGTAGCTTT+CGG - chr5_4:69711453-69711472 Msa0867050:intron 30.0%
AGAAAAAAGTAAGAGGTGAA+GGG + chr5_4:69711565-69711584 None:intergenic 30.0%
TCATTCCAGAAAAAAGTAAG+AGG + chr5_4:69711572-69711591 None:intergenic 30.0%
! AAATTTGGTGAAACTAGATG+AGG + chr5_4:69711837-69711856 None:intergenic 30.0%
AGTTTCACCAAATTTACTTC+TGG - chr5_4:69711842-69711861 Msa0867050:intron 30.0%
TTGTTGATGTATCTTCAGTA+TGG - chr5_4:69711924-69711943 Msa0867050:CDS 30.0%
ATCACTTGATTAGTAGGAAA+TGG - chr5_4:69712004-69712023 Msa0867050:CDS 30.0%
TCACTTGATTAGTAGGAAAT+GGG - chr5_4:69712005-69712024 Msa0867050:CDS 30.0%
ATCACTTCATTAGTAGGAAA+TGG - chr5_4:69712072-69712091 Msa0867050:intron 30.0%
TCACTTCATTAGTAGGAAAT+GGG - chr5_4:69712073-69712092 Msa0867050:intron 30.0%
TAAAGGTTAGATATGACTAG+TGG + chr5_4:69712306-69712325 None:intergenic 30.0%
!!! TTTAGTTTTGATATCCTAGG+TGG - chr5_4:69712513-69712532 Msa0867050:intron 30.0%
AAGATACATGTGAGAAAGAT+CGG + chr5_4:69712609-69712628 None:intergenic 30.0%
GTCAAGCTGATAATATTTAC+TGG - chr5_4:69712713-69712732 Msa0867050:intron 30.0%
AATAAGAGATGGAATACCAA+AGG + chr5_4:69713054-69713073 None:intergenic 30.0%
TCAGCATTAGAAAATTGACA+GGG + chr5_4:69713197-69713216 None:intergenic 30.0%
ATCAGCATTAGAAAATTGAC+AGG + chr5_4:69713198-69713217 None:intergenic 30.0%
CTAAGATGGATATGATATTG+AGG + chr5_4:69713268-69713287 None:intergenic 30.0%
GCTTATACTTTACACTAAGA+TGG + chr5_4:69713282-69713301 None:intergenic 30.0%
CCATAAATTATGCACTTTGA+GGG + chr5_4:69713304-69713323 None:intergenic 30.0%
CCTCAAAGTGCATAATTTAT+GGG - chr5_4:69713302-69713321 Msa0867050:intron 30.0%
TCACAATTCTATAATTCCCT+GGG + chr5_4:69713434-69713453 None:intergenic 30.0%
TCACTTAAATTAACCATGAG+TGG + chr5_4:69713502-69713521 None:intergenic 30.0%
TAAGATATTCTCACAAGACA+CGG + chr5_4:69713592-69713611 None:intergenic 30.0%
!!! TGATCTGTATGTTTTAGTTG+TGG - chr5_4:69713693-69713712 Msa0867050:CDS 30.0%
! ATCGTGAATTTTACAAGGAT+TGG - chr5_4:69713836-69713855 Msa0867050:intron 30.0%
ACATGTTCAAAGGAATTGAA+GGG + chr5_4:69714104-69714123 None:intergenic 30.0%
!! TAAGTGGAGTTCTAAATCAT+TGG - chr5_4:69714258-69714277 Msa0867050:CDS 30.0%
TCTAAAAACTTACGTGTGAA+TGG - chr5_4:69714425-69714444 Msa0867050:intron 30.0%
TACACAGGTACATGTTTATT+AGG + chr5_4:69714534-69714553 None:intergenic 30.0%
TAATACATGTTTGATGCACT+TGG - chr5_4:69714634-69714653 Msa0867050:intron 30.0%
AATACATGTTTGATGCACTT+GGG - chr5_4:69714635-69714654 Msa0867050:intron 30.0%
GTCATTTCAGATAATGACTT+TGG - chr5_4:69714718-69714737 Msa0867050:intron 30.0%
! TTGTTTGGAACCAAAGAAAA+TGG - chr5_4:69714842-69714861 Msa0867050:intron 30.0%
ATATTTATACCTTTAGTCCC+TGG - chr5_4:69714893-69714912 Msa0867050:intron 30.0%
ACATTTAGTTAACATAGCAG+TGG + chr5_4:69715074-69715093 None:intergenic 30.0%
ACATAATAAATCGGACACAA+TGG + chr5_4:69715123-69715142 None:intergenic 30.0%
!! TAGTTACTGGATTAGTTAGA+GGG + chr5_4:69715155-69715174 None:intergenic 30.0%
!! GATGGTTAGAATTTAGTTTG+TGG + chr5_4:69715187-69715206 None:intergenic 30.0%
!! TTTTCACTTTTCTTCTTCCT+TGG - chr5_4:69715229-69715248 Msa0867050:CDS 30.0%
! ATGTTTGATAACAAAGACCA+AGG + chr5_4:69715249-69715268 None:intergenic 30.0%
! ACATGCATACTTTTATTAGG+AGG + chr5_4:69715612-69715631 None:intergenic 30.0%
TGTATAACTCTGGTTGTAAT+TGG + chr5_4:69715660-69715679 None:intergenic 30.0%
AGAGTTATACAAGTTTCTCA+CGG - chr5_4:69715669-69715688 Msa0867050:five_prime_UTR 30.0%
! TGGGGTATTTATTGTTTGTG+GGG + chr5_4:69707722-69707741 None:intergenic 35.0%
! GTGGGGTATTTATTGTTTGT+GGG + chr5_4:69707723-69707742 None:intergenic 35.0%
ATTCGAATAGTAAAGGTGGT+GGG + chr5_4:69707741-69707760 None:intergenic 35.0%
AATTCGAATAGTAAAGGTGG+TGG + chr5_4:69707742-69707761 None:intergenic 35.0%
TCGAATTCGAATAGTAAAGG+TGG + chr5_4:69707745-69707764 None:intergenic 35.0%
ATCGGACGTTTACTTTACTT+TGG + chr5_4:69707951-69707970 None:intergenic 35.0%
AAAGTAAAGTAAACGTCCGA+TGG - chr5_4:69707950-69707969 Msa0867050:intron 35.0%
! TTCCTTGATTTTACGATGAG+CGG + chr5_4:69708246-69708265 None:intergenic 35.0%
AACCTGACGGAAAATGTTAT+CGG + chr5_4:69708282-69708301 None:intergenic 35.0%
CCTAGCTTCTGTAAAAATCA+CGG + chr5_4:69708519-69708538 None:intergenic 35.0%
! CGTGATTTTTACAGAAGCTA+GGG - chr5_4:69708517-69708536 Msa0867050:intron 35.0%
! ATTTTTACAGAAGCTAGGGA+GGG - chr5_4:69708521-69708540 Msa0867050:intron 35.0%
ATGATAGGATAGGATAGGTT+AGG - chr5_4:69708561-69708580 Msa0867050:intron 35.0%
!!! TGCTAGCTTTTGCAAAATCA+CGG - chr5_4:69708633-69708652 Msa0867050:intron 35.0%
!! ACATGCACTTTTTGCATGTT+CGG + chr5_4:69708694-69708713 None:intergenic 35.0%
TGTATGTACAGTGTACTAGA+CGG - chr5_4:69708760-69708779 Msa0867050:intron 35.0%
GTTATAAATGAACATGCGTG+CGG - chr5_4:69708852-69708871 Msa0867050:CDS 35.0%
TATTAAAGAGGAGAGGAAGA+GGG + chr5_4:69709007-69709026 None:intergenic 35.0%
ATATTAAAGAGGAGAGGAAG+AGG + chr5_4:69709008-69709027 None:intergenic 35.0%
TATGCCATTAAGATCCTGTT+TGG - chr5_4:69709040-69709059 Msa0867050:CDS 35.0%
CTATTGACATAAGCACTTGT+GGG + chr5_4:69709286-69709305 None:intergenic 35.0%
TCTATTGACATAAGCACTTG+TGG + chr5_4:69709287-69709306 None:intergenic 35.0%
TCAAATAAGCCAATCCAAAC+AGG - chr5_4:69709397-69709416 Msa0867050:CDS 35.0%
ACATTACCAACACATGAAGA+GGG + chr5_4:69709540-69709559 None:intergenic 35.0%
TCTTGCAATATTTCCTTTGG+CGG - chr5_4:69709658-69709677 Msa0867050:intron 35.0%
! TGCCAACTTTTCCACTATAA+AGG + chr5_4:69709684-69709703 None:intergenic 35.0%
! AAGCACTCAAAAAGTACAAC+TGG + chr5_4:69709751-69709770 None:intergenic 35.0%
!!! AGTTGTACTTTTTGAGTGCT+TGG - chr5_4:69709750-69709769 Msa0867050:intron 35.0%
!!! GTTGTACTTTTTGAGTGCTT+GGG - chr5_4:69709751-69709770 Msa0867050:intron 35.0%
!!! TTGTACTTTTTGAGTGCTTG+GGG - chr5_4:69709752-69709771 Msa0867050:intron 35.0%
AAATGATGTAGGTTGCACTT+TGG - chr5_4:69709819-69709838 Msa0867050:intron 35.0%
GACCTGAGGATTACTAAAAT+AGG + chr5_4:69709959-69709978 None:intergenic 35.0%
AAAGTGGGAAAATAGGAACT+GGG + chr5_4:69710234-69710253 None:intergenic 35.0%
AAAAGTGGGAAAATAGGAAC+TGG + chr5_4:69710235-69710254 None:intergenic 35.0%
GTGATAGATGTATGTGAGTT+TGG - chr5_4:69710476-69710495 Msa0867050:CDS 35.0%
TTGTATCATGAACTATTCCC+TGG + chr5_4:69710565-69710584 None:intergenic 35.0%
! AAATTTTTGATAGACTCGGC+TGG + chr5_4:69710634-69710653 None:intergenic 35.0%
GCTAAAAACAAATACTCCCA+TGG + chr5_4:69710704-69710723 None:intergenic 35.0%
! ACATGTGAGTTGCTTTATGA+GGG - chr5_4:69711061-69711080 Msa0867050:intron 35.0%
AAGCTACAGCTTAGTAAATC+AGG + chr5_4:69711452-69711471 None:intergenic 35.0%
GAAAAAAGTAAGAGGTGAAG+GGG + chr5_4:69711564-69711583 None:intergenic 35.0%
CAGAAAAAAGTAAGAGGTGA+AGG + chr5_4:69711566-69711585 None:intergenic 35.0%
!!! CTTCACCTCTTACTTTTTTC+TGG - chr5_4:69711564-69711583 Msa0867050:intron 35.0%
ACAGGAAACAAGATTGAATG+GGG + chr5_4:69711645-69711664 None:intergenic 35.0%
CACAGGAAACAAGATTGAAT+GGG + chr5_4:69711646-69711665 None:intergenic 35.0%
ACACAGGAAACAAGATTGAA+TGG + chr5_4:69711647-69711666 None:intergenic 35.0%
GCATATTCCATGTGAGTATT+GGG + chr5_4:69711687-69711706 None:intergenic 35.0%
TGCATATTCCATGTGAGTAT+TGG + chr5_4:69711688-69711707 None:intergenic 35.0%
TTATGTAAGCTTCAAAAGCC+TGG - chr5_4:69711710-69711729 Msa0867050:intron 35.0%
CTTATATAAGCACAACCGTA+TGG - chr5_4:69711899-69711918 Msa0867050:intron 35.0%
GATACATCAACAAGTCCATA+CGG + chr5_4:69711917-69711936 None:intergenic 35.0%
TGTGTGATCACTTGATTAGT+AGG - chr5_4:69711998-69712017 Msa0867050:CDS 35.0%
CTACTAATGAAGTGATCACA+CGG + chr5_4:69712068-69712087 None:intergenic 35.0%
! ACTCAATGCTTCTTTTCTCA+TGG - chr5_4:69712162-69712181 Msa0867050:intron 35.0%
TGTACAACTGGAACATACAA+GGG + chr5_4:69712268-69712287 None:intergenic 35.0%
TTGTACAACTGGAACATACA+AGG + chr5_4:69712269-69712288 None:intergenic 35.0%
ATATGACTAGTGGAATGCAA+GGG + chr5_4:69712296-69712315 None:intergenic 35.0%
CAAATGTGACAGTGAGATAA+AGG + chr5_4:69712323-69712342 None:intergenic 35.0%
TCTCACTGTCACATTTGATT+TGG - chr5_4:69712326-69712345 Msa0867050:intron 35.0%
TGTCAGAATATCTACAGAGT+TGG + chr5_4:69712875-69712894 None:intergenic 35.0%
!!! TGCTGGGAGTTTTTTACAAT+AGG + chr5_4:69712932-69712951 None:intergenic 35.0%
CTGTTCCAAATCTATATGTG+TGG - chr5_4:69713002-69713021 Msa0867050:intron 35.0%
CCCTCAAAGTGCATAATTTA+TGG - chr5_4:69713301-69713320 Msa0867050:intron 35.0%
CCCATAAATTATGCACTTTG+AGG + chr5_4:69713305-69713324 None:intergenic 35.0%
GATATGATGTTGTGTGCATA+TGG - chr5_4:69713337-69713356 Msa0867050:intron 35.0%
! TTGTCTGAAGTATACACTCA+TGG - chr5_4:69713369-69713388 Msa0867050:intron 35.0%
GTCACAATTCTATAATTCCC+TGG + chr5_4:69713435-69713454 None:intergenic 35.0%
AAGATATTCTCACAAGACAC+GGG + chr5_4:69713591-69713610 None:intergenic 35.0%
TTCAACCTAGATTCAAACAG+TGG + chr5_4:69713787-69713806 None:intergenic 35.0%
! TGGTGATCGTGAATTTTACA+AGG - chr5_4:69713831-69713850 Msa0867050:intron 35.0%
! GTGAATTTTACAAGGATTGG+TGG - chr5_4:69713839-69713858 Msa0867050:intron 35.0%
TGTGACTTACTTGTCTTTCT+TGG - chr5_4:69713949-69713968 Msa0867050:intron 35.0%
GAAGGGACAAGCAAAATATT+TGG + chr5_4:69714087-69714106 None:intergenic 35.0%
GACATGTTCAAAGGAATTGA+AGG + chr5_4:69714105-69714124 None:intergenic 35.0%
TTCCTTTGAACATGTCTATG+AGG - chr5_4:69714109-69714128 Msa0867050:intron 35.0%
GCTATGTTACAGAAAGCAAA+AGG - chr5_4:69714131-69714150 Msa0867050:intron 35.0%
! ACCTATATTTTCCATGTCTG+AGG - chr5_4:69714338-69714357 Msa0867050:intron 35.0%
TCCTCAGACATGGAAAATAT+AGG + chr5_4:69714342-69714361 None:intergenic 35.0%
AGAAGATGCTTGATTACCTT+TGG + chr5_4:69714373-69714392 None:intergenic 35.0%
TCAAGCATCTTCTTGTGTTA+CGG - chr5_4:69714380-69714399 Msa0867050:intron 35.0%
TCGACAGCAATAAATTGAGA+TGG + chr5_4:69714485-69714504 None:intergenic 35.0%
TCTATGAGAATTCTCTACAC+AGG + chr5_4:69714549-69714568 None:intergenic 35.0%
! CATACCCAACACATTTTGTT+TGG - chr5_4:69714827-69714846 Msa0867050:intron 35.0%
GGTTCCAAACAAAATGTGTT+GGG + chr5_4:69714834-69714853 None:intergenic 35.0%
TGGTTCCAAACAAAATGTGT+TGG + chr5_4:69714835-69714854 None:intergenic 35.0%
GATTATTAATTCAGGGACCA+GGG + chr5_4:69714913-69714932 None:intergenic 35.0%
! TTTTGCAGGGAAAGTTTGAA+AGG + chr5_4:69714935-69714954 None:intergenic 35.0%
!! GTAGTTACTGGATTAGTTAG+AGG + chr5_4:69715156-69715175 None:intergenic 35.0%
AAATGTGTTACGACAGAAGA+TGG + chr5_4:69715205-69715224 None:intergenic 35.0%
!!! TGCTGTTTTAATTGCCTTCA+TGG - chr5_4:69715408-69715427 Msa0867050:five_prime_UTR 35.0%
! AGAGTATCTTGGCGAAATTA+TGG + chr5_4:69715511-69715530 None:intergenic 35.0%
CATGCACACAAAATGATTCA+GGG + chr5_4:69715550-69715569 None:intergenic 35.0%
ACATGCACACAAAATGATTC+AGG + chr5_4:69715551-69715570 None:intergenic 35.0%
GTGAGAAACTTGTATAACTC+TGG + chr5_4:69715670-69715689 None:intergenic 35.0%
!! TTGCCACATATTCAAGTTGT+GGG - chr5_4:69715731-69715750 Msa0867050:five_prime_UTR 35.0%
! GGTGGGGTATTTATTGTTTG+TGG + chr5_4:69707724-69707743 None:intergenic 40.0%
TTCGAATAGTAAAGGTGGTG+GGG + chr5_4:69707740-69707759 None:intergenic 40.0%
! TCTAGTTCCGATGACTCTAT+CGG - chr5_4:69708131-69708150 Msa0867050:intron 40.0%
! TCCTTGATTTTACGATGAGC+GGG + chr5_4:69708245-69708264 None:intergenic 40.0%
AAAATGTTATCGGAGCTGAG+TGG + chr5_4:69708272-69708291 None:intergenic 40.0%
AGCTTCTGTAAAAATCACGG+TGG + chr5_4:69708516-69708535 None:intergenic 40.0%
! CCGTGATTTTTACAGAAGCT+AGG - chr5_4:69708516-69708535 Msa0867050:intron 40.0%
! GATTTTTACAGAAGCTAGGG+AGG - chr5_4:69708520-69708539 Msa0867050:intron 40.0%
! TAGCTTTTGCAAAATCACGG+TGG - chr5_4:69708636-69708655 Msa0867050:intron 40.0%
CTACTATACAGAGGTTGAAG+AGG + chr5_4:69708933-69708952 None:intergenic 40.0%
CAACAAGGACTACTATACAG+AGG + chr5_4:69708942-69708961 None:intergenic 40.0%
TATCAAACTTAGGGCCTGTT+TGG + chr5_4:69709414-69709433 None:intergenic 40.0%
! TTTTTGTTCTGCAGTACGGT+TGG - chr5_4:69709465-69709484 Msa0867050:intron 40.0%
! TACGGTTGGTTGATTAAGAC+TGG - chr5_4:69709479-69709498 Msa0867050:intron 40.0%
!!! GGTTGATTAAGACTGGCTTT+TGG - chr5_4:69709486-69709505 Msa0867050:intron 40.0%
CATTACCAACACATGAAGAG+GGG + chr5_4:69709539-69709558 None:intergenic 40.0%
GACATTACCAACACATGAAG+AGG + chr5_4:69709541-69709560 None:intergenic 40.0%
! GGCCTTTATAGTGGAAAAGT+TGG - chr5_4:69709679-69709698 Msa0867050:intron 40.0%
!!! TGTACTTTTTGAGTGCTTGG+GGG - chr5_4:69709753-69709772 Msa0867050:intron 40.0%
AAGGAAACAAGGATCTCATG+TGG + chr5_4:69709781-69709800 None:intergenic 40.0%
CAAAGTACAAAACTGACCTG+AGG + chr5_4:69709973-69709992 None:intergenic 40.0%
AAGTGGGAAAATAGGAACTG+GGG + chr5_4:69710233-69710252 None:intergenic 40.0%
! ACTGTGACATCATCTTTTGC+AGG - chr5_4:69710372-69710391 Msa0867050:intron 40.0%
CTCACCCACTAACTAACTAA+AGG + chr5_4:69710414-69710433 None:intergenic 40.0%
! CTTTAGTTAGTTAGTGGGTG+AGG - chr5_4:69710412-69710431 Msa0867050:intron 40.0%
! GTATGTGAGTTTGGAAGTGT+TGG - chr5_4:69710485-69710504 Msa0867050:CDS 40.0%
! TAGACTCAAATGGTATTGGG+AGG + chr5_4:69710805-69710824 None:intergenic 40.0%
TGGAACCATGATTCACTCAA+GGG + chr5_4:69710877-69710896 None:intergenic 40.0%
CAGGCTTCCTGTATCATATT+AGG + chr5_4:69711034-69711053 None:intergenic 40.0%
CAACTCACATGTCTACAAAC+AGG + chr5_4:69711053-69711072 None:intergenic 40.0%
! GACATGTGAGTTGCTTTATG+AGG - chr5_4:69711060-69711079 Msa0867050:intron 40.0%
!! TGTGATTCTGCTTTTGTGTC+AGG - chr5_4:69711190-69711209 Msa0867050:intron 40.0%
! TGCTACTTGCTTGCATTGTA+TGG - chr5_4:69711224-69711243 Msa0867050:intron 40.0%
! AATCTTGTTTCCTGTGTTGC+AGG - chr5_4:69711650-69711669 Msa0867050:intron 40.0%
! ATCTTGTTTCCTGTGTTGCA+GGG - chr5_4:69711651-69711670 Msa0867050:intron 40.0%
CGTGTGATCACTTCATTAGT+AGG - chr5_4:69712066-69712085 Msa0867050:intron 40.0%
! TCCATTTGGTCTTCAAGTGT+TGG - chr5_4:69712116-69712135 Msa0867050:intron 40.0%
GTGATATGCATGAGGTCAAA+TGG + chr5_4:69712142-69712161 None:intergenic 40.0%
CATTGAGTGTGATATGCATG+AGG + chr5_4:69712150-69712169 None:intergenic 40.0%
GATATGACTAGTGGAATGCA+AGG + chr5_4:69712297-69712316 None:intergenic 40.0%
TTTGTACTTGTCGTTGCTTC+TGG - chr5_4:69712355-69712374 Msa0867050:intron 40.0%
!! TTAGGGGCTGAAGCTATTTT+AGG - chr5_4:69712391-69712410 Msa0867050:intron 40.0%
!! TAGGGGCTGAAGCTATTTTA+GGG - chr5_4:69712392-69712411 Msa0867050:intron 40.0%
!! CTGAAGCTATTTTAGGGGAT+TGG - chr5_4:69712398-69712417 Msa0867050:intron 40.0%
TGCTGCTGAGAATACTGTAT+TGG - chr5_4:69712471-69712490 Msa0867050:intron 40.0%
GAAGTGCAATGCATGTATGT+GGG + chr5_4:69712559-69712578 None:intergenic 40.0%
! AGAAGTGCAATGCATGTATG+TGG + chr5_4:69712560-69712579 None:intergenic 40.0%
ATACATGTGAGAAAGATCGG+AGG + chr5_4:69712606-69712625 None:intergenic 40.0%
! AAACTCCCAGCATCCTTTTA+AGG - chr5_4:69712940-69712959 Msa0867050:intron 40.0%
! AACTCCCAGCATCCTTTTAA+GGG - chr5_4:69712941-69712960 Msa0867050:intron 40.0%
GTTTCCCTTAAAAGGATGCT+GGG + chr5_4:69712948-69712967 None:intergenic 40.0%
TGTTTCCCTTAAAAGGATGC+TGG + chr5_4:69712949-69712968 None:intergenic 40.0%
CAGCTTCAGAACTCTTTCAA+TGG + chr5_4:69712981-69713000 None:intergenic 40.0%
CAGAGCCACACATATAGATT+TGG + chr5_4:69713010-69713029 None:intergenic 40.0%
AAGAGATGGAATACCAAAGG+TGG + chr5_4:69713051-69713070 None:intergenic 40.0%
CAATTCTATAATTCCCTGGG+TGG + chr5_4:69713431-69713450 None:intergenic 40.0%
GAATGCAAGAACTGTTGAAG+AGG - chr5_4:69713861-69713880 Msa0867050:intron 40.0%
GTATTGGAGGATGTGGAATA+TGG - chr5_4:69713998-69714017 Msa0867050:intron 40.0%
AGCCTCATAGACATGTTCAA+AGG + chr5_4:69714114-69714133 None:intergenic 40.0%
AAAGCAAAAGGAGTAGTCAC+AGG - chr5_4:69714143-69714162 Msa0867050:intron 40.0%
AAGCAAAAGGAGTAGTCACA+GGG - chr5_4:69714144-69714163 Msa0867050:intron 40.0%
GGAAACTACAGAAGCAACAA+TGG + chr5_4:69714177-69714196 None:intergenic 40.0%
TGAATGTCAGAACACATCTG+TGG - chr5_4:69714222-69714241 Msa0867050:intron 40.0%
ATCATTGGTGTACATCTGAG+CGG - chr5_4:69714273-69714292 Msa0867050:CDS 40.0%
CGAATCATCCATTTGTGAAC+AGG + chr5_4:69714316-69714335 None:intergenic 40.0%
! TATTTTCCATGTCTGAGGAC+TGG - chr5_4:69714343-69714362 Msa0867050:intron 40.0%
GGATTATTAATTCAGGGACC+AGG + chr5_4:69714914-69714933 None:intergenic 40.0%
GCAGCAATTAAATGACACGA+GGG + chr5_4:69714986-69715005 None:intergenic 40.0%
AAATCGGACACAATGGAAGA+GGG + chr5_4:69715116-69715135 None:intergenic 40.0%
TAAATCGGACACAATGGAAG+AGG + chr5_4:69715117-69715136 None:intergenic 40.0%
GAACAAAGCAGAAACCATGA+AGG + chr5_4:69715425-69715444 None:intergenic 40.0%
AAACAAAAAGGGAGCAGTGA+AGG + chr5_4:69715485-69715504 None:intergenic 40.0%
!! TCACATCATCGAGAGTATCT+TGG + chr5_4:69715522-69715541 None:intergenic 40.0%
CACAACTTGAATATGTGGCA+AGG + chr5_4:69715732-69715751 None:intergenic 40.0%
!! CTTGCCACATATTCAAGTTG+TGG - chr5_4:69715730-69715749 Msa0867050:five_prime_UTR 40.0%
AGTAAAGTCTGTGGTACGTG+CGG - chr5_4:69707512-69707531 Msa0867050:CDS 45.0%
GAATGCAGCAAAGCAAAGGA+AGG + chr5_4:69707543-69707562 None:intergenic 45.0%
! AATTGGCAGCAGCGATGTTT+TGG + chr5_4:69708163-69708182 None:intergenic 45.0%
TCCCGCTCATCGTAAAATCA+AGG - chr5_4:69708241-69708260 Msa0867050:intron 45.0%
! CTCCGATAACATTTTCCGTC+AGG - chr5_4:69708277-69708296 Msa0867050:intron 45.0%
! ACGGTGGCTCATTGCTATTA+TGG - chr5_4:69708652-69708671 Msa0867050:intron 45.0%
AATCAGTTGCAGAGTCATGC+TGG - chr5_4:69708907-69708926 Msa0867050:intron 45.0%
AACTTAGGGCCTGTTTGGAT+TGG + chr5_4:69709409-69709428 None:intergenic 45.0%
!!! GTACTTTTTGAGTGCTTGGG+GGG - chr5_4:69709754-69709773 Msa0867050:intron 45.0%
ACACTAATTCCTAGGTACCC+CGG - chr5_4:69710152-69710171 Msa0867050:intron 45.0%
!! GTCTTTTGGAAGCAGTTGTG+AGG + chr5_4:69710202-69710221 None:intergenic 45.0%
AATAGGAACTGGGGGTTATC+AGG + chr5_4:69710224-69710243 None:intergenic 45.0%
AGTGGGAAAATAGGAACTGG+GGG + chr5_4:69710232-69710251 None:intergenic 45.0%
CCTGGATCAATGTGATCAGA+GGG + chr5_4:69710547-69710566 None:intergenic 45.0%
CCTCTGATCACATTGATCCA+GGG - chr5_4:69710545-69710564 Msa0867050:CDS 45.0%
TGATAGACTCGGCTGGTATT+GGG + chr5_4:69710627-69710646 None:intergenic 45.0%
TTGATAGACTCGGCTGGTAT+TGG + chr5_4:69710628-69710647 None:intergenic 45.0%
TGAAGCCCTTGAGTGAATCA+TGG - chr5_4:69710869-69710888 Msa0867050:intron 45.0%
GTGGAACCATGATTCACTCA+AGG + chr5_4:69710878-69710897 None:intergenic 45.0%
AGATGCTTGTGTTTCTCTGC+AGG - chr5_4:69711167-69711186 Msa0867050:intron 45.0%
AGGTGAAGGGGATAACATTG+TGG + chr5_4:69711552-69711571 None:intergenic 45.0%
CAAAAGCCTGGCCTACTTTA+TGG - chr5_4:69711722-69711741 Msa0867050:intron 45.0%
CGTAGGAGCAACCATAAAGT+AGG + chr5_4:69711736-69711755 None:intergenic 45.0%
TGCTCCTACGTTATGTTACC+AGG - chr5_4:69711746-69711765 Msa0867050:intron 45.0%
GCTACCTGGTAACATAACGT+AGG + chr5_4:69711753-69711772 None:intergenic 45.0%
GCCAACACTTGAAGACCAAA+TGG + chr5_4:69712120-69712139 None:intergenic 45.0%
GCAAGGGAACTTTGTACAAC+TGG + chr5_4:69712280-69712299 None:intergenic 45.0%
!! AGGGGCTGAAGCTATTTTAG+GGG - chr5_4:69712393-69712412 Msa0867050:intron 45.0%
CAGAAAACAATCTGCCACCT+AGG + chr5_4:69712530-69712549 None:intergenic 45.0%
TAACACCCAACCCTTTCGAA+TGG + chr5_4:69712684-69712703 None:intergenic 45.0%
TCTACTGCTTCTTCCACCTT+TGG - chr5_4:69713035-69713054 Msa0867050:intron 45.0%
TCCAATCCCTTTGTGCATCT+GGG + chr5_4:69713533-69713552 None:intergenic 45.0%
TAGATTCAAACAGTGGCCCA+TGG + chr5_4:69713780-69713799 None:intergenic 45.0%
ATGGGCCACTGTTTGAATCT+AGG - chr5_4:69713779-69713798 Msa0867050:intron 45.0%
TTGGCAGAGCTTCTTCGATT+TGG - chr5_4:69713811-69713830 Msa0867050:intron 45.0%
TCCACATCCTCCAATACTGA+TGG + chr5_4:69713995-69714014 None:intergenic 45.0%
TGTTGCAGCCTGTTCACAAA+TGG - chr5_4:69714305-69714324 Msa0867050:intron 45.0%
! TCTGAGGACTGGTATACCAA+AGG - chr5_4:69714354-69714373 Msa0867050:intron 45.0%
GGCAGCAATTAAATGACACG+AGG + chr5_4:69714987-69715006 None:intergenic 45.0%
ACGTCAGCTAATCAGTGACA+TGG + chr5_4:69715008-69715027 None:intergenic 45.0%
! ATGTCACTGATTAGCTGACG+TGG - chr5_4:69715007-69715026 Msa0867050:CDS 45.0%
! GGTTTCTGCTTTGTTCCATG+AGG - chr5_4:69715429-69715448 Msa0867050:five_prime_UTR 45.0%
ACGCCCACAACTTGAATATG+TGG + chr5_4:69715737-69715756 None:intergenic 45.0%
!!! TATTTTATTCTATATAATTT+TGG + chr5_4:69707907-69707926 None:intergenic 5.0%
!! AATTATAATACATAATAAAT+CGG + chr5_4:69715132-69715151 None:intergenic 5.0%
GTAAAGTCTGTGGTACGTGC+GGG - chr5_4:69707513-69707532 Msa0867050:CDS 50.0%
GGGTGAATGCAGCAAAGCAA+AGG + chr5_4:69707547-69707566 None:intergenic 50.0%
CGAAGCGAAGAAGGTAAGGT+GGG + chr5_4:69707567-69707586 None:intergenic 50.0%
CATGCGAAGCGAAGAAGGTA+AGG + chr5_4:69707571-69707590 None:intergenic 50.0%
GAGACAGGTTCGCTAATGCA+GGG + chr5_4:69707791-69707810 None:intergenic 50.0%
TGAGACAGGTTCGCTAATGC+AGG + chr5_4:69707792-69707811 None:intergenic 50.0%
AGGAGTCGTTGAGAACCGTT+GGG + chr5_4:69708010-69708029 None:intergenic 50.0%
CTTCTTCGAATCGTCTGCCA+CGG - chr5_4:69708070-69708089 Msa0867050:intron 50.0%
!! ATCCTTCACCGACTCTTCAC+CGG + chr5_4:69708111-69708130 None:intergenic 50.0%
!! GTCAGTGCCGATAGAGTCAT+CGG + chr5_4:69708141-69708160 None:intergenic 50.0%
TTACGATGAGCGGGAACAGA+AGG + chr5_4:69708236-69708255 None:intergenic 50.0%
GATTAACGGCGAGAACCTGA+CGG + chr5_4:69708295-69708314 None:intergenic 50.0%
GTCTGCTGTTCACTGCAACA+AGG + chr5_4:69708957-69708976 None:intergenic 50.0%
ATTGGCCCCTCTTCATGTGT+TGG - chr5_4:69709531-69709550 Msa0867050:intron 50.0%
TCCTTTGGCGGCCTTTATAG+TGG - chr5_4:69709670-69709689 Msa0867050:intron 50.0%
TCCACTATAAAGGCCGCCAA+AGG + chr5_4:69709674-69709693 None:intergenic 50.0%
CACTAATTCCTAGGTACCCC+GGG - chr5_4:69710153-69710172 Msa0867050:intron 50.0%
! CTGGGGGTTATCAGGTCTTT+TGG + chr5_4:69710216-69710235 None:intergenic 50.0%
CCCTCTGATCACATTGATCC+AGG - chr5_4:69710544-69710563 Msa0867050:CDS 50.0%
CCCTGGATCAATGTGATCAG+AGG + chr5_4:69710548-69710567 None:intergenic 50.0%
TGAAGCTCTTGGGTGAACCA+TGG - chr5_4:69710684-69710703 Msa0867050:intron 50.0%
GAAGCTCTTGGGTGAACCAT+GGG - chr5_4:69710685-69710704 Msa0867050:intron 50.0%
AGCGCTTCCCAATACTCACA+TGG - chr5_4:69711677-69711696 Msa0867050:intron 50.0%
GAGCAACCATAAAGTAGGCC+AGG + chr5_4:69711731-69711750 None:intergenic 50.0%
CACTCGAAAATGCTGCTACC+TGG + chr5_4:69711767-69711786 None:intergenic 50.0%
CCAACCCTTTCGAATGGAAG+GGG + chr5_4:69712678-69712697 None:intergenic 50.0%
CCCAACCCTTTCGAATGGAA+GGG + chr5_4:69712679-69712698 None:intergenic 50.0%
CCCTTCCATTCGAAAGGGTT+GGG - chr5_4:69712676-69712695 Msa0867050:intron 50.0%
ACCCAACCCTTTCGAATGGA+AGG + chr5_4:69712680-69712699 None:intergenic 50.0%
TATCATTGGTGCACCACCCA+GGG - chr5_4:69713415-69713434 Msa0867050:intron 50.0%
CTCTGACCCAGATGCACAAA+GGG - chr5_4:69713524-69713543 Msa0867050:CDS 50.0%
ACCCAGATGCACAAAGGGAT+TGG - chr5_4:69713529-69713548 Msa0867050:CDS 50.0%
CTCCAATCCCTTTGTGCATC+TGG + chr5_4:69713534-69713553 None:intergenic 50.0%
ACCACTGCTGCCATCAGTAT+TGG - chr5_4:69713982-69714001 Msa0867050:intron 50.0%
TCCAATACTGATGGCAGCAG+TGG + chr5_4:69713986-69714005 None:intergenic 50.0%
! ACTGCTGCCATCAGTATTGG+AGG - chr5_4:69713985-69714004 Msa0867050:intron 50.0%
! GCCATCAGTATTGGAGGATG+TGG - chr5_4:69713991-69714010 Msa0867050:intron 50.0%
GGTATACCAGTCCTCAGACA+TGG + chr5_4:69714352-69714371 None:intergenic 50.0%
ATTCAGGGACCAGGGACTAA+AGG + chr5_4:69714905-69714924 None:intergenic 50.0%
GGCACAGCTGAATAGACCAA+TGG - chr5_4:69715028-69715047 Msa0867050:CDS 50.0%
GTTGTGACTCAGCAAGCCAT+TGG + chr5_4:69715047-69715066 None:intergenic 50.0%
GTGGCAGCTAGAGTAGTTAC+TGG + chr5_4:69715168-69715187 None:intergenic 50.0%
GAGACGAACAACACACCTCA+TGG + chr5_4:69715447-69715466 None:intergenic 50.0%
GCGAAGCGAAGAAGGTAAGG+TGG + chr5_4:69707568-69707587 None:intergenic 55.0%
GAGCACATGCGAAGCGAAGA+AGG + chr5_4:69707576-69707595 None:intergenic 55.0%
CGTTGAGAACCGTTGGGTTC+CGG + chr5_4:69708004-69708023 None:intergenic 55.0%
GAGGAGTCGTTGAGAACCGT+TGG + chr5_4:69708011-69708030 None:intergenic 55.0%
CGGTCTGCGACGTAAAACAG+AGG + chr5_4:69708030-69708049 None:intergenic 55.0%
CGATTCGAAGAAGCCGCTGA+CGG + chr5_4:69708063-69708082 None:intergenic 55.0%
CGAGAGTTCCGGTGAAGAGT+CGG - chr5_4:69708100-69708119 Msa0867050:intron 55.0%
TTCCGGTGAAGAGTCGGTGA+AGG - chr5_4:69708106-69708125 Msa0867050:intron 55.0%
GATGAGCGGGAACAGAAGGA+CGG + chr5_4:69708232-69708251 None:intergenic 55.0%
AATGAACATGCGTGCGGACC+AGG - chr5_4:69708858-69708877 Msa0867050:CDS 55.0%
TGCCAGGCTTCTGTAACACC+CGG + chr5_4:69710174-69710193 None:intergenic 55.0%
CAGTTGTGAGGAGAGTTGCC+AGG + chr5_4:69710190-69710209 None:intergenic 55.0%
! TAGACTCGGCTGGTATTGGG+AGG + chr5_4:69710624-69710643 None:intergenic 55.0%
! GAAGGGGTGCGAGGATATCT+TGG + chr5_4:69712662-69712681 None:intergenic 55.0%
! TTTCGAATGGAAGGGGTGCG+AGG + chr5_4:69712671-69712690 None:intergenic 55.0%
TCGCACCCCTTCCATTCGAA+AGG - chr5_4:69712670-69712689 Msa0867050:intron 55.0%
CGCACCCCTTCCATTCGAAA+GGG - chr5_4:69712671-69712690 Msa0867050:intron 55.0%
CCCCTTCCATTCGAAAGGGT+TGG - chr5_4:69712675-69712694 Msa0867050:intron 55.0%
CTATCATTGGTGCACCACCC+AGG - chr5_4:69713414-69713433 Msa0867050:intron 55.0%
! TGTCTTTGGTGCGCCACTCA+TGG - chr5_4:69713486-69713505 Msa0867050:intron 55.0%
GCTCTGACCCAGATGCACAA+AGG - chr5_4:69713523-69713542 Msa0867050:CDS 55.0%
CGGACACAATGGAAGAGGGA+TGG + chr5_4:69715112-69715131 None:intergenic 55.0%
GGGTCGTCGGAAATCGCCAT+CGG + chr5_4:69707969-69707988 None:intergenic 60.0%
GCGATTTCCGACGACCCTCA+CGG - chr5_4:69707972-69707991 Msa0867050:intron 60.0%
GAGAACCGTTGGGTTCCGGA+CGG + chr5_4:69708000-69708019 None:intergenic 60.0%
TTCGAAGAAGCCGCTGACGG+AGG + chr5_4:69708060-69708079 None:intergenic 60.0%
CTTCGAATCGTCTGCCACGG+TGG - chr5_4:69708073-69708092 Msa0867050:intron 60.0%
GAATCGTCTGCCACGGTGGA+AGG - chr5_4:69708077-69708096 Msa0867050:intron 60.0%
ACGGTGGAAGGCGAGAGTTC+CGG - chr5_4:69708089-69708108 Msa0867050:intron 60.0%
! CTGTAACACCCGGGGTACCT+AGG + chr5_4:69710164-69710183 None:intergenic 60.0%
CCAGGCTTCTGTAACACCCG+GGG + chr5_4:69710172-69710191 None:intergenic 60.0%
GCCAGGCTTCTGTAACACCC+GGG + chr5_4:69710173-69710192 None:intergenic 60.0%
AGCGCTTCTCCCTGCAACAC+AGG + chr5_4:69711663-69711682 None:intergenic 60.0%
CTGAGTGCAGCTGTGCATCG+CGG - chr5_4:69715704-69715723 Msa0867050:five_prime_UTR 60.0%
GGAACTCTCGCCTTCCACCG+TGG + chr5_4:69708090-69708109 None:intergenic 65.0%
! CCCCGGGTGTTACAGAAGCC+TGG - chr5_4:69710169-69710188 Msa0867050:intron 65.0%
! GGAGCGCTCACGAAGCAGCA+TGG - chr5_4:69710506-69710525 Msa0867050:CDS 65.0%
GACGGCACCGTGAGGGTCGT+CGG + chr5_4:69707982-69708001 None:intergenic 70.0%
!! ACGACCCTCACGGTGCCGTC+CGG - chr5_4:69707982-69708001 Msa0867050:intron 70.0%
GGTTCCGGACGGCACCGTGA+GGG + chr5_4:69707989-69708008 None:intergenic 70.0%
!! CGGTGCCGTCCGGAACCCAA+CGG - chr5_4:69707992-69708011 Msa0867050:intron 70.0%
GGGTTCCGGACGGCACCGTG+AGG + chr5_4:69707990-69708009 None:intergenic 75.0%
CCGCTGACGGAGGCTGCGCT+CGG + chr5_4:69708050-69708069 None:intergenic 75.0%
CCGAGCGCAGCCTCCGTCAG+CGG - chr5_4:69708047-69708066 Msa0867050:intron 75.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 69707467 69715760 69707467 ID=Msa0867050;Name=Msa0867050
chr5_4 mRNA 69707467 69715760 69707467 ID=Msa0867050-mRNA-1;Parent=Msa0867050;Name=Msa0867050-mRNA-1;_AED=0.26;_eAED=0.29;_QI=502|0.76|0.78|1|1|1|14|0|521
chr5_4 exon 69707467 69707556 69707467 ID=Msa0867050-mRNA-1:exon:21922;Parent=Msa0867050-mRNA-1
chr5_4 exon 69707777 69707824 69707777 ID=Msa0867050-mRNA-1:exon:21921;Parent=Msa0867050-mRNA-1
chr5_4 exon 69708852 69708914 69708852 ID=Msa0867050-mRNA-1:exon:21920;Parent=Msa0867050-mRNA-1
chr5_4 exon 69709040 69709228 69709040 ID=Msa0867050-mRNA-1:exon:21919;Parent=Msa0867050-mRNA-1
chr5_4 exon 69709345 69709426 69709345 ID=Msa0867050-mRNA-1:exon:21918;Parent=Msa0867050-mRNA-1
chr5_4 exon 69710171 69710307 69710171 ID=Msa0867050-mRNA-1:exon:21917;Parent=Msa0867050-mRNA-1
chr5_4 exon 69710467 69710568 69710467 ID=Msa0867050-mRNA-1:exon:21916;Parent=Msa0867050-mRNA-1
chr5_4 exon 69711460 69711555 69711460 ID=Msa0867050-mRNA-1:exon:21915;Parent=Msa0867050-mRNA-1
chr5_4 exon 69711915 69712038 69711915 ID=Msa0867050-mRNA-1:exon:21914;Parent=Msa0867050-mRNA-1
chr5_4 exon 69713252 69713319 69713252 ID=Msa0867050-mRNA-1:exon:21913;Parent=Msa0867050-mRNA-1
chr5_4 exon 69713500 69713575 69713500 ID=Msa0867050-mRNA-1:exon:21912;Parent=Msa0867050-mRNA-1
chr5_4 exon 69713675 69713748 69713675 ID=Msa0867050-mRNA-1:exon:21911;Parent=Msa0867050-mRNA-1
chr5_4 exon 69714228 69714314 69714228 ID=Msa0867050-mRNA-1:exon:21910;Parent=Msa0867050-mRNA-1
chr5_4 exon 69714929 69715760 69714929 ID=Msa0867050-mRNA-1:exon:21909;Parent=Msa0867050-mRNA-1
chr5_4 five_prime_UTR 69715259 69715760 69715259 ID=Msa0867050-mRNA-1:five_prime_utr;Parent=Msa0867050-mRNA-1
chr5_4 CDS 69714929 69715258 69714929 ID=Msa0867050-mRNA-1:cds;Parent=Msa0867050-mRNA-1
chr5_4 CDS 69714228 69714314 69714228 ID=Msa0867050-mRNA-1:cds;Parent=Msa0867050-mRNA-1
chr5_4 CDS 69713675 69713748 69713675 ID=Msa0867050-mRNA-1:cds;Parent=Msa0867050-mRNA-1
chr5_4 CDS 69713500 69713575 69713500 ID=Msa0867050-mRNA-1:cds;Parent=Msa0867050-mRNA-1
chr5_4 CDS 69713252 69713319 69713252 ID=Msa0867050-mRNA-1:cds;Parent=Msa0867050-mRNA-1
chr5_4 CDS 69711915 69712038 69711915 ID=Msa0867050-mRNA-1:cds;Parent=Msa0867050-mRNA-1
chr5_4 CDS 69711460 69711555 69711460 ID=Msa0867050-mRNA-1:cds;Parent=Msa0867050-mRNA-1
chr5_4 CDS 69710467 69710568 69710467 ID=Msa0867050-mRNA-1:cds;Parent=Msa0867050-mRNA-1
chr5_4 CDS 69710171 69710307 69710171 ID=Msa0867050-mRNA-1:cds;Parent=Msa0867050-mRNA-1
chr5_4 CDS 69709345 69709426 69709345 ID=Msa0867050-mRNA-1:cds;Parent=Msa0867050-mRNA-1
chr5_4 CDS 69709040 69709228 69709040 ID=Msa0867050-mRNA-1:cds;Parent=Msa0867050-mRNA-1
chr5_4 CDS 69708852 69708914 69708852 ID=Msa0867050-mRNA-1:cds;Parent=Msa0867050-mRNA-1
chr5_4 CDS 69707777 69707824 69707777 ID=Msa0867050-mRNA-1:cds;Parent=Msa0867050-mRNA-1
chr5_4 CDS 69707467 69707556 69707467 ID=Msa0867050-mRNA-1:cds;Parent=Msa0867050-mRNA-1
Gene Sequence

>Msa0867050

ATGGCGATTTCCGACGACCCTCACGGTGCCGTCCGGAACCCAACGGTTCTCAACGACTCCTCTGTTTTACGTCGCAGACCGAGCGCAGCCTCCGTCAGCGGCTTCTTCGAATCGTCTGCCACGGTGGAAGGCGAGAGTTCCGGTGAAGAGTCGGTGAAGGATTCTAGTTCCGATGACTCTATCGGCACTGACCAAAACATCGCTGCTGCCAATTCTGATCAAAATCAAGTGCCTGATATTTCTTCGATTAAATTCACTTACCGTCCTTCTGTTCCCGCTCATCGTAAAATCAAGGAAAGTCCACTCAGCTCCGATAACATTTTCCGTCAGTTGCAGAGTCATGCTGGCCTCTTCAACCTCTGTATAGTAGTCCTTGTTGCAGTGAACAGCAGACTTATCATTGAGAATTTAATGAAGTACGGTTGGTTGATTAAGACTGGCTTTTGGTTTAGTTCAAAATCATTGAGAGATTGGCCCCTCTTCATGTGTTGTCTTAGTCTTGCAATATTTCCTTTGGCGGCCTTTATAGTGGAAAAGTTGGCACAACAAAAGTGTATTTATGAACCTATTGTTGTTCTACTTCATATAATCATTGCAACAACTGCGGTTCTCTATCCTATTTTAGTAATCCTCAGGTGTGATTCTGCTTTTGTGTCAGGCGTCACATTGATGCTACTTGCTTGCATTGTATGGTTAAAACTGGTTTCTTATGCACATACGAACTATGATTTGAGAGCACTTACAAATTCAATTGAAAAGGGAGAAGCGCTTCCCAATACTCACATGGAATATGCATATTATGTAAGCTTCAAAAGCCTGGCCTACTTTATGGTTGCTCCTACGTTATGTTACCAGCCAAGATATCCTCGCACCCCTTCCATTCGAAAGGGTTGGGTGTTACGTCAATTTGTCAAGCTGATAATATTTACTGGAGTTATGGGATTTATAATAGAACAATATATTAATCCTATTGTAAAAAACTCCCAGCATCCTTTTAAGGGAAACATTCTATATGCCATTGAAAGAGTTCTGAAGCTGTCTGTTCCAAATCTATATGTGTGGCTCTGCATGTTCTACTGCTTCTTCCACCTTTGGTTGAATATATTGGCAGAGCTTCTTCGATTTGGTGATCGTGAATTTTACAAGGATTGGTGGAATGCAAGAACTGTTGAAGAGTATTGGAGGATGTGGAATATGGTATGTCTTTCAGACTTAATTTTAATGATCAAGTTGTATAAGCCTTTCTTTGTTTTTGTTATCTCCAAATATTTTGCTTGTCCCTTCAATTCCTTTGAACATGTCTATGAGGCTATGTTACAGAAAGCAAAAGGAGTAGTCACAGGGCTTGTCTCCATTGTTGCTTCTCCTGTTCACAAATGGATGATTCGTCACCTATATTTTCCATGTCTGAGGACTGGTATACCAAAGGGTGCTGCTGTTTTAATTGCCTTCATGGTTTCTGCTTTGTTCCATGAGAGTTATACAAGTTTCTCACGGTTTTTAGTCTGTCTGAGTGCAGCTGTGCATCGCGGTTCCTTGCCACATATTCAAGTTGTGGGCGTTTAG

Protein sequence

>Msa0867050

MAISDDPHGAVRNPTVLNDSSVLRRRPSAASVSGFFESSATVEGESSGEESVKDSSSDDSIGTDQNIAAANSDQNQVPDISSIKFTYRPSVPAHRKIKESPLSSDNIFRQLQSHAGLFNLCIVVLVAVNSRLIIENLMKYGWLIKTGFWFSSKSLRDWPLFMCCLSLAIFPLAAFIVEKLAQQKCIYEPIVVLLHIIIATTAVLYPILVILRCDSAFVSGVTLMLLACIVWLKLVSYAHTNYDLRALTNSIEKGEALPNTHMEYAYYVSFKSLAYFMVAPTLCYQPRYPRTPSIRKGWVLRQFVKLIIFTGVMGFIIEQYINPIVKNSQHPFKGNILYAIERVLKLSVPNLYVWLCMFYCFFHLWLNILAELLRFGDREFYKDWWNARTVEEYWRMWNMVCLSDLILMIKLYKPFFVFVISKYFACPFNSFEHVYEAMLQKAKGVVTGLVSIVASPVHKWMIRHLYFPCLRTGIPKGAAVLIAFMVSALFHESYTSFSRFLVCLSAAVHRGSLPHIQVVGV*