AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0166800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0166800 MtrunA17_Chr1g0181811 95.276 762 22 2 1 762 1 748 0.0 1495
Msa0166800 MtrunA17_Chr4g0030271 42.680 724 363 11 56 750 63 763 2.57e-147 450
Msa0166800 MtrunA17_Chr3g0127941 32.345 708 370 22 73 750 44 672 2.02e-71 246
Msa0166800 MtrunA17_Chr7g0276361 58.915 129 53 0 78 206 7 135 3.46e-46 174
Msa0166800 MtrunA17_Chr3g0091641 42.188 128 74 0 79 206 18 145 8.46e-26 112
Msa0166800 MtrunA17_Chr4g0061021 41.406 128 75 0 79 206 27 154 1.13e-25 112
Msa0166800 MtrunA17_Chr2g0304841 38.525 122 72 2 85 206 22 140 1.15e-22 103
Msa0166800 MtrunA17_Chr1g0161431 35.366 164 91 3 85 247 15 164 3.75e-22 101
Msa0166800 MtrunA17_Chr3g0134481 39.200 125 73 2 85 209 12 133 1.28e-21 93.2
Msa0166800 MtrunA17_Chr3g0137101 37.705 122 73 2 85 206 12 130 2.86e-21 99.0
Msa0166800 MtrunA17_Chr2g0294911 39.344 122 71 1 85 206 33 151 5.28e-21 97.8
Msa0166800 MtrunA17_Chr4g0067981 33.121 157 102 1 85 241 35 188 5.39e-21 98.2
Msa0166800 MtrunA17_Chr4g0074411 37.705 122 73 1 85 206 22 140 2.25e-20 95.9
Msa0166800 MtrunA17_Chr1g0149841 34.586 133 84 2 85 217 9 138 2.55e-19 92.0
Msa0166800 MtrunA17_Chr4g0074401 36.066 122 75 1 85 206 21 139 6.32e-19 91.3
Msa0166800 MtrunA17_Chr3g0123131 36.066 122 75 1 85 206 17 135 1.54e-18 90.1
Msa0166800 MtrunA17_Chr7g0275401 34.848 132 83 2 85 216 9 137 3.07e-18 86.3
Msa0166800 MtrunA17_Chr1g0149851 35.246 122 76 2 85 206 9 127 1.50e-17 86.7
Msa0166800 MtrunA17_Chr8g0376881 35.246 122 76 1 85 206 29 147 6.29e-17 84.7
Msa0166800 MtrunA17_Chr7g0256551 30.935 139 78 2 85 205 9 147 4.78e-15 75.5
Msa0166800 MtrunA17_Chr7g0275891 32.331 133 86 3 85 216 9 138 9.70e-15 76.6
Msa0166800 MtrunA17_Chr5g0414931 27.957 186 101 4 83 252 14 182 1.61e-13 70.9
Msa0166800 MtrunA17_Chr8g0383961 32.520 123 78 2 85 206 18 136 2.46e-13 70.9
Msa0166800 MtrunA17_Chr3g0128691 35.200 125 68 2 87 199 20 143 2.59e-13 68.2
Msa0166800 MtrunA17_Chr3g0134461 31.469 143 94 2 85 226 12 151 2.82e-13 69.3
Msa0166800 MtrunA17_Chr4g0074421 40.789 76 42 1 131 206 2 74 1.00e-12 67.8
Msa0166800 MtrunA17_Chr3g0082861 29.197 137 79 1 87 205 6 142 1.45e-12 66.6
Msa0166800 MtrunA17_Chr4g0059571 31.538 130 80 3 85 205 26 155 7.90e-12 65.5
Msa0166800 MtrunA17_Chr1g0170741 31.496 127 75 2 85 199 8 134 1.22e-11 64.7
Msa0166800 MtrunA17_Chr3g0118211 28.477 151 93 4 82 223 20 164 2.76e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0166800 AT5G02810.1 48.617 759 267 24 36 752 36 713 7.16e-172 512
Msa0166800 AT5G02810.2 45.268 634 231 22 161 752 10 569 8.81e-106 336
Msa0166800 AT5G60100.5 46.804 438 162 13 73 495 52 433 1.80e-91 295
Msa0166800 AT5G60100.5 40.708 113 38 5 647 750 392 484 5.69e-11 66.2
Msa0166800 AT5G60100.3 46.804 438 162 13 73 495 52 433 1.80e-91 295
Msa0166800 AT5G60100.3 40.708 113 38 5 647 750 392 484 5.69e-11 66.2
Msa0166800 AT5G60100.1 46.804 438 162 13 73 495 52 433 1.80e-91 295
Msa0166800 AT5G60100.1 40.708 113 38 5 647 750 392 484 5.69e-11 66.2
Msa0166800 AT5G60100.7 48.462 390 137 11 73 448 52 391 1.98e-89 287
Msa0166800 AT5G60100.6 48.462 390 137 11 73 448 52 391 1.98e-89 287
Msa0166800 AT5G60100.4 48.462 390 137 11 73 448 52 391 1.98e-89 287
Msa0166800 AT5G60100.2 44.086 465 162 14 73 495 52 460 1.75e-85 280
Msa0166800 AT5G60100.2 40.708 113 38 5 647 750 419 511 4.18e-11 66.6
Msa0166800 AT2G46790.3 57.463 134 57 0 73 206 25 158 4.62e-51 185
Msa0166800 AT2G46790.1 57.463 134 57 0 73 206 25 158 6.88e-51 185
Msa0166800 AT2G46790.1 43.478 115 45 5 643 757 371 465 2.74e-14 76.6
Msa0166800 AT5G24470.1 59.701 134 54 0 73 206 38 171 9.61e-50 184
Msa0166800 AT5G61380.1 40.625 128 76 0 79 206 13 140 9.38e-24 107
Msa0166800 AT3G16857.1 35.227 176 103 3 85 254 37 207 2.90e-22 102
Msa0166800 AT3G16857.2 35.227 176 103 3 85 254 37 207 2.93e-22 102
Msa0166800 AT2G25180.1 33.702 181 87 5 85 261 17 168 1.37e-21 100
Msa0166800 AT4G31920.1 38.017 121 72 2 85 205 17 134 2.43e-19 92.8
Msa0166800 AT2G01760.1 37.705 122 74 1 85 206 11 130 4.83e-18 87.4
Msa0166800 AT1G67710.1 35.252 139 83 2 85 219 11 146 8.90e-18 87.8
Msa0166800 AT3G16857.3 35.461 141 80 3 120 254 2 137 1.03e-15 81.6
Msa0166800 AT2G46670.1 43.478 115 45 5 643 757 86 180 3.26e-15 75.1
Msa0166800 AT2G46790.2 70.732 41 12 0 166 206 1 41 4.54e-15 77.8
Msa0166800 AT2G46790.2 43.478 115 45 5 643 757 254 348 4.87e-14 74.7
Msa0166800 AT1G10470.1 31.724 145 84 2 80 212 29 170 1.24e-14 75.1
Msa0166800 AT3G62670.1 34.524 168 101 6 77 242 34 194 1.29e-14 77.4
Msa0166800 AT2G46790.5 43.478 115 45 5 643 757 214 308 4.72e-14 74.3
Msa0166800 AT2G46790.4 43.478 115 45 5 643 757 214 308 4.72e-14 74.3
Msa0166800 AT2G01760.2 37.168 113 68 2 94 206 49 158 6.77e-14 75.1
Msa0166800 AT5G58080.1 31.967 122 79 1 85 206 18 135 8.22e-14 75.5
Msa0166800 AT1G59940.2 34.351 131 71 2 87 205 127 254 1.98e-13 72.8
Msa0166800 AT1G10470.3 31.944 144 87 2 80 213 15 157 3.05e-13 70.9
Msa0166800 AT5G62920.1 35.772 123 64 4 77 199 41 148 4.00e-13 68.9
Msa0166800 AT1G59940.1 33.835 133 73 2 85 205 33 162 6.65e-13 69.3
Msa0166800 AT3G56380.1 33.077 130 77 2 85 204 20 149 1.03e-12 67.0
Msa0166800 AT3G48100.1 35.433 127 68 4 85 199 25 149 1.52e-12 67.4
Msa0166800 AT1G19050.1 33.333 132 75 2 85 205 24 153 2.16e-12 67.4
Msa0166800 AT2G40670.1 32.593 135 79 2 81 203 25 159 5.75e-12 65.1
Msa0166800 AT3G56380.2 32.824 131 77 3 85 204 20 150 1.23e-11 63.9
Msa0166800 AT3G57040.2 28.986 138 79 2 87 205 11 148 1.75e-11 65.5
Msa0166800 AT3G57040.1 28.986 138 79 2 87 205 11 148 1.75e-11 65.5
Msa0166800 AT1G74890.1 31.618 136 78 2 77 212 34 154 4.00e-11 63.5

Find 242 sgRNAs with CRISPR-Local

Find 828 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTGATTTAATAGATTTC+TGG 0.104631 1_4:-48397176 None:intergenic
TGCACTTCTATACAAGATTA+TGG 0.158802 1_4:+48396535 Msa0166800:CDS
AGAAGTTGGGTCTTCTATTT+AGG 0.167561 1_4:-48400206 None:intergenic
CCAGATTGATTCTCACAATT+AGG 0.182320 1_4:-48400099 None:intergenic
TAGTGTCTTGCAGTTGTATT+TGG 0.195227 1_4:+48394016 Msa0166800:intron
TCCTAACCTGGGATGAGTTT+GGG 0.198333 1_4:+48403362 Msa0166800:three_prime_UTR
CGATGCAACTATTCTGGTTT+TGG 0.215949 1_4:+48392913 Msa0166800:five_prime_UTR
ATTGCAAGCTTGGAAGATTT+TGG 0.231070 1_4:+48396448 Msa0166800:CDS
GATGGTTCCTCCAGTCTTAA+AGG 0.244142 1_4:+48399029 Msa0166800:CDS
CTCTCTCCACGTGGCACATT+TGG 0.258607 1_4:+48392474 Msa0166800:five_prime_UTR
TGCTAGCATCATTTGAGTTC+TGG 0.274365 1_4:-48400610 None:intergenic
AGAAAGCGATGCAACTATTC+TGG 0.277886 1_4:+48392907 Msa0166800:five_prime_UTR
AATGGAAGCAATGGACAAAA+TGG 0.284536 1_4:+48401055 Msa0166800:CDS
CTCTCTTATAACTGCAGATT+TGG 0.286096 1_4:-48400672 None:intergenic
TTCCTAACCTGGGATGAGTT+TGG 0.289056 1_4:+48403361 Msa0166800:three_prime_UTR
TGCTAGCAACAACATTGATA+TGG 0.296871 1_4:+48400625 Msa0166800:CDS
AAAGGAGTGTCTAGAGAAAA+AGG 0.305223 1_4:+48399047 Msa0166800:CDS
CAGATTGATTCTCACAATTA+GGG 0.310638 1_4:-48400098 None:intergenic
AAAACCTGTGGCAGCATGTT+TGG 0.312351 1_4:+48396795 Msa0166800:CDS
CCTTGATTTAATAGATTTCT+GGG 0.316876 1_4:-48397175 None:intergenic
AATAATCGGTAATTGAATTA+TGG 0.321560 1_4:-48392650 None:intergenic
GAAGTTGGGTCTTCTATTTA+GGG 0.323812 1_4:-48400205 None:intergenic
GAAGATAATGCGGAAGTTAG+AGG 0.324713 1_4:-48392557 None:intergenic
CTTGCAGTTGTATTTGGGTT+GGG 0.327297 1_4:+48394022 Msa0166800:intron
AGAAGCTGGTCCTGCAATTC+AGG 0.327601 1_4:+48400311 Msa0166800:CDS
GTGGCAATGCCTGGTTTATC+AGG 0.332763 1_4:+48396509 Msa0166800:CDS
TGAAAAGTTTGATAACAATT+CGG 0.339114 1_4:+48397203 Msa0166800:CDS
GAAAAGTTTGATAACAATTC+GGG 0.346605 1_4:+48397204 Msa0166800:CDS
CAGCAAATGGATTGCAAGCT+TGG 0.350061 1_4:+48396438 Msa0166800:CDS
TAATGTTGCAGAACCTGAAC+TGG 0.350615 1_4:-48403315 None:intergenic
GCATTTGACACAATGGCGTT+TGG 0.350777 1_4:+48402948 Msa0166800:three_prime_UTR
GATGTCATCTCATGACTCTA+TGG 0.359807 1_4:+48396700 Msa0166800:CDS
GACAGCAACAATGGACTTGC+TGG 0.359847 1_4:+48401115 Msa0166800:CDS
TTTACATATTAGATCCCTTA+AGG 0.361725 1_4:+48394359 Msa0166800:CDS
GAGCAAGATAATGGAAGTTT+AGG 0.362759 1_4:+48397237 Msa0166800:CDS
GTAACTTCTAAGCTGTTATT+AGG 0.363149 1_4:-48400533 None:intergenic
GATAGGTGAACCTCAACTTT+TGG 0.363982 1_4:-48402610 None:intergenic
TCCCACTGAGAGCCTGATTT+AGG 0.367118 1_4:-48398934 None:intergenic
ACGTGGAGAGAGATATTTCC+AGG 0.369726 1_4:-48392463 None:intergenic
TGACAAGGGTTCTGCTACTC+AGG 0.372499 1_4:+48400838 Msa0166800:CDS
AATTTGCTCATTGAATTTAG+AGG 0.373603 1_4:-48400058 None:intergenic
TTGGTTGTTGATGCCTCTGC+TGG 0.385063 1_4:-48400695 None:intergenic
CTCAAGGGGCAATTATTTGT+TGG 0.386253 1_4:+48394328 Msa0166800:CDS
GCACTTCTATACAAGATTAT+GGG 0.386285 1_4:+48396536 Msa0166800:CDS
TTTAAGCTCATTCTTGCGTA+TGG 0.388945 1_4:-48396774 None:intergenic
CACTACCATCACCATTGTTC+AGG 0.390653 1_4:-48397260 None:intergenic
GGTTATAATTATCGCGAGCT+TGG 0.390997 1_4:+48394091 Msa0166800:five_prime_UTR
CTGGGTTTGGTCACCGCAAC+GGG 0.391335 1_4:-48403296 None:intergenic
ACAATGGCGTTTGGGATAAC+CGG 0.391367 1_4:+48402957 Msa0166800:three_prime_UTR
TTCCGTTCATCCTGAATTGC+AGG 0.392365 1_4:-48400321 None:intergenic
ACTCCACAAGCAAGACCTTA+AGG 0.392485 1_4:-48394374 None:intergenic
CATTTGACACAATGGCGTTT+GGG 0.392547 1_4:+48402949 Msa0166800:three_prime_UTR
GTTATAATTATCGCGAGCTT+GGG 0.393066 1_4:+48394092 Msa0166800:five_prime_UTR
GTTGTCAATATCTGAGAAGT+TGG 0.394245 1_4:-48400220 None:intergenic
AGCAATGATGAGCAAGATAA+TGG 0.400711 1_4:+48397228 Msa0166800:CDS
GCGGTTCCAGTCAAAATTGC+AGG 0.406686 1_4:+48400003 Msa0166800:intron
GCGGTGACCAAACCCAGTTC+AGG 0.406785 1_4:+48403302 Msa0166800:three_prime_UTR
TGGAGTGACTGATGGAGTTA+AGG 0.413525 1_4:+48394245 Msa0166800:CDS
GCATCATTTGAGTTCTGGTT+AGG 0.415598 1_4:-48400605 None:intergenic
GTCAACTTCTACAGCTCGTT+TGG 0.415675 1_4:-48398908 None:intergenic
AAATATTACATGAAGACTTC+TGG 0.415703 1_4:-48402992 None:intergenic
CTCACTTGCATTACCATTCG+AGG 0.416999 1_4:-48402902 None:intergenic
TCAAGGGGCAATTATTTGTT+GGG 0.420288 1_4:+48394329 Msa0166800:CDS
TTGGTCAGCGTTTGCGGGAT+GGG 0.420714 1_4:+48394169 Msa0166800:CDS
GAAGCAACGCAGTGACAATA+TGG 0.423326 1_4:-48394413 None:intergenic
GTCTTTAAGTGTTTGTCAAA+GGG 0.426456 1_4:+48396728 Msa0166800:CDS
TACTACATCATAGTAATAAT+CGG 0.427736 1_4:-48392664 None:intergenic
AAGAACTTGGTCAGCGTTTG+CGG 0.431358 1_4:+48394163 Msa0166800:CDS
TTGGGATAACCGGACGGAAA+AGG 0.431972 1_4:+48402967 Msa0166800:three_prime_UTR
CTTCGCAATTGTAGTTATGA+AGG 0.432435 1_4:+48394432 Msa0166800:CDS
AGTGTCTTGCAGTTGTATTT+GGG 0.434979 1_4:+48394017 Msa0166800:intron
CTTTCTTTCCTTCAGTCTAG+TGG 0.435646 1_4:+48397126 Msa0166800:intron
ATCCCTTAAGGTCTTGCTTG+TGG 0.436804 1_4:+48394371 Msa0166800:CDS
TTAACTGAGGTGGCAATGCC+TGG 0.438214 1_4:+48396500 Msa0166800:CDS
GAAGATTCGGCATCATGCTC+AGG 0.440741 1_4:-48400920 None:intergenic
TTCCCTGCATATTTCAGCAT+TGG 0.441824 1_4:-48399004 None:intergenic
TAAAATGAGATCAATATGAT+TGG 0.443706 1_4:-48396480 None:intergenic
GGAGTTAAGGTTGGTGAGGG+AGG 0.444636 1_4:+48394258 Msa0166800:CDS
TTCTACAGCTCGTTTGGTCC+AGG 0.448107 1_4:-48398902 None:intergenic
AACTTAAATGAAGGAGTAGC+TGG 0.450112 1_4:+48394198 Msa0166800:CDS
TCTTGCAGTTGTATTTGGGT+TGG 0.452421 1_4:+48394021 Msa0166800:intron
AATGGACTTGCTGGGAATAG+TGG 0.453499 1_4:+48401124 Msa0166800:CDS
TGGGCTGGAAAGCAGACGTT+TGG 0.453554 1_4:-48400727 None:intergenic
AGAACTTGGTCAGCGTTTGC+GGG 0.454509 1_4:+48394164 Msa0166800:CDS
TTTCTTTCCTTCAGTCTAGT+GGG 0.456206 1_4:+48397127 Msa0166800:intron
TCTAGACACTCCTTTAAGAC+TGG 0.457847 1_4:-48399039 None:intergenic
AGATTGAGTTGGTGAGGGAT+TGG 0.461397 1_4:-48392528 None:intergenic
TTCCTTCAGTCTAGTGGGAG+TGG 0.461821 1_4:+48397132 Msa0166800:intron
GAAGTTGACAGTCCTAAATC+AGG 0.462528 1_4:+48398922 Msa0166800:CDS
CTCCACAAGCAAGACCTTAA+GGG 0.463153 1_4:-48394373 None:intergenic
TCAGTTATTGAAGCAGCAAA+TGG 0.463336 1_4:+48396425 Msa0166800:intron
AGTATCAATAGAAGTGCTTC+AGG 0.463935 1_4:+48401025 Msa0166800:CDS
CCTAATTGTGAGAATCAATC+TGG 0.463977 1_4:+48400099 Msa0166800:CDS
AGTGCCAGTTGAAGGTAATA+CGG 0.464184 1_4:+48400994 Msa0166800:CDS
TGCAGAACCTGAACTGGGTT+TGG 0.466814 1_4:-48403309 None:intergenic
CATCATGCTCAGGTAGCAAC+TGG 0.467241 1_4:-48400910 None:intergenic
AGAGAGAGATTGAGTTGGTG+AGG 0.472417 1_4:-48392534 None:intergenic
CTCTTGAGCTCAGTTTAAAG+AGG 0.474120 1_4:+48400274 Msa0166800:CDS
AGTGGTGATGCTAGTGGAAA+TGG 0.475297 1_4:+48401148 Msa0166800:CDS
ATTCCAATGCTGAAATATGC+AGG 0.475867 1_4:+48399001 Msa0166800:CDS
TTCAATGAGCAAATTAATAG+AGG 0.478804 1_4:+48400066 Msa0166800:CDS
TTGCAGTTGTATTTGGGTTG+GGG 0.479778 1_4:+48394023 Msa0166800:intron
AGTCTTTAAGTGTTTGTCAA+AGG 0.479846 1_4:+48396727 Msa0166800:CDS
AGTCACCATTGACACTCATC+TGG 0.480036 1_4:-48394137 None:intergenic
AAGGTTGGTGAGGGAGGGAA+TGG 0.483694 1_4:+48394264 Msa0166800:CDS
AGAGGAGAGAGAGATTGAGT+TGG 0.484260 1_4:-48392539 None:intergenic
TTGTCAATATCTGAGAAGTT+GGG 0.484449 1_4:-48400219 None:intergenic
TTAAGCTCATTCTTGCGTAT+GGG 0.487300 1_4:-48396773 None:intergenic
TTTCCCGTATTACCTTCAAC+TGG 0.488361 1_4:-48400998 None:intergenic
TGGGATAACCGGACGGAAAA+GGG 0.489534 1_4:+48402968 Msa0166800:three_prime_UTR
TGAAATATGCAGGGAAAAGA+TGG 0.491685 1_4:+48399011 Msa0166800:CDS
AGTGGGAGTGGCAGTGAAAG+TGG 0.491905 1_4:+48397144 Msa0166800:CDS
GAGAGAGATTGAGTTGGTGA+GGG 0.494164 1_4:-48392533 None:intergenic
TCAAAACAAGAATTCTCAAA+GGG 0.500542 1_4:+48401189 Msa0166800:CDS
CCCAGAAATCTATTAAATCA+AGG 0.500800 1_4:+48397175 Msa0166800:CDS
TCATCAAATCATTGCCAACC+TGG 0.502204 1_4:+48392445 Msa0166800:five_prime_UTR
CCTAACCTGGGATGAGTTTG+GGG 0.502579 1_4:+48403363 Msa0166800:three_prime_UTR
AGCAGCGCTGCAATTAATGC+TGG 0.502976 1_4:+48401079 Msa0166800:CDS
GCTAGCAACAACATTGATAT+GGG 0.503896 1_4:+48400626 Msa0166800:CDS
CCCCAAACTCATCCCAGGTT+AGG 0.504119 1_4:-48403363 None:intergenic
CTTGGTCAGCGTTTGCGGGA+TGG 0.504234 1_4:+48394168 Msa0166800:CDS
GGGAGACTTCTTAGCATTGA+AGG 0.505204 1_4:-48400483 None:intergenic
TTATAATAATGACTTAGTAA+TGG 0.506016 1_4:+48392715 Msa0166800:five_prime_UTR
TCCTCCAAACATGCTGCCAC+AGG 0.506809 1_4:-48396799 None:intergenic
GTGGTCAAAGTGCCAGTTGA+AGG 0.508886 1_4:+48400986 Msa0166800:CDS
ATTTGCTCATTGAATTTAGA+GGG 0.509233 1_4:-48400057 None:intergenic
GGTAAAAGCATTATTAGCAG+TGG 0.510774 1_4:-48400651 None:intergenic
AAAACAGCTATATATATAAG+TGG 0.512540 1_4:-48403412 None:intergenic
GATTGGTGACGTGGATGAAG+TGG 0.512582 1_4:-48392511 None:intergenic
ATGGAAGCAATGGACAAAAT+GGG 0.515017 1_4:+48401056 Msa0166800:CDS
AGAGAGGTGCTTTCATAAGC+AGG 0.516010 1_4:+48401255 Msa0166800:CDS
CAACATTATAGAGACGGCTT+AGG 0.516236 1_4:+48403330 Msa0166800:three_prime_UTR
GCAAATTAATAGAGGACAGA+TGG 0.519442 1_4:+48400074 Msa0166800:CDS
AGAGTTGCTTCCGACACATC+CGG 0.520860 1_4:-48400507 None:intergenic
GGGCAATTATTTGTTGGGAG+AGG 0.522794 1_4:+48394334 Msa0166800:CDS
TAGTGATACTTATTATGAGC+TGG 0.524480 1_4:+48392742 Msa0166800:five_prime_UTR
TCATTTGAGTTCTGGTTAGG+AGG 0.525127 1_4:-48400602 None:intergenic
GATGATGAAGTGAAATGTAA+TGG 0.525442 1_4:+48394225 Msa0166800:CDS
TTCAGGTTCGATATCAGAGC+AGG 0.528122 1_4:+48402827 Msa0166800:intron
GGAAGCAACAATGGAAGCAA+TGG 0.529487 1_4:+48401046 Msa0166800:CDS
GGGAAGAACAACTTAAATGA+AGG 0.530123 1_4:+48394189 Msa0166800:CDS
GAGTTAAGGTTGGTGAGGGA+GGG 0.530743 1_4:+48394259 Msa0166800:CDS
AACTTGAGCACAAGTGCTGT+CGG 0.532765 1_4:-48398974 None:intergenic
ATGTCATCTCATGACTCTAT+GGG 0.536687 1_4:+48396701 Msa0166800:CDS
CTGATCAGTCTGCTTTCTCA+AGG 0.536827 1_4:+48400358 Msa0166800:CDS
CTTTGCATTTGAGAGTCAGA+AGG 0.538723 1_4:-48400168 None:intergenic
GTGCCAGTTGAAGGTAATAC+GGG 0.540221 1_4:+48400995 Msa0166800:CDS
TACCGCAGCAACAGTCTCAA+GGG 0.542656 1_4:+48394313 Msa0166800:CDS
ACTTGAGCACAAGTGCTGTC+GGG 0.543651 1_4:-48398973 None:intergenic
CCTAGAAAAGTTGAAGAAGC+TGG 0.545226 1_4:+48400297 Msa0166800:CDS
TTCATTGCAATGTCCACCTG+TGG 0.545322 1_4:+48392393 Msa0166800:five_prime_UTR
GTTATGCACAGGAAGAAGAT+TGG 0.546948 1_4:-48392987 None:intergenic
ACCTGTGGCAGCATGTTTGG+AGG 0.552529 1_4:+48396798 Msa0166800:CDS
GGTATCCAGATGAGTGTCAA+TGG 0.554780 1_4:+48394132 Msa0166800:CDS
ACGTGGATAAGATCAAAAGA+AGG 0.556582 1_4:-48392420 None:intergenic
ACATGTCAACAGACTTGATG+TGG 0.557814 1_4:+48400032 Msa0166800:CDS
ACTGGGTTTGGTCACCGCAA+CGG 0.563586 1_4:-48403297 None:intergenic
GCTATATATATAAGTGGAGA+GGG 0.563591 1_4:-48403406 None:intergenic
GTACCGCAGCAACAGTCTCA+AGG 0.568297 1_4:+48394312 Msa0166800:CDS
ATCAAAACAAGAATTCTCAA+AGG 0.571810 1_4:+48401188 Msa0166800:CDS
AAATGTAATGGAGTGACTGA+TGG 0.573227 1_4:+48394237 Msa0166800:CDS
AAAAGAAGGGTGGCCACAGG+TGG 0.575359 1_4:-48392406 None:intergenic
AATAAAACACAGTTATGCAC+AGG 0.575884 1_4:-48392998 None:intergenic
ATCAAAAGAAGGGTGGCCAC+AGG 0.579564 1_4:-48392409 None:intergenic
GGAGAGAGATATTTCCAGGT+TGG 0.579669 1_4:-48392459 None:intergenic
TGACAATGGTAGTGGCACTC+AGG 0.582901 1_4:+48397281 Msa0166800:CDS
GTCCTGCAATTCAGGATGAA+CGG 0.586027 1_4:+48400319 Msa0166800:CDS
GATGGAGTTAAGGTTGGTGA+GGG 0.589139 1_4:+48394255 Msa0166800:CDS
GTGACTGATGGAGTTAAGGT+TGG 0.591130 1_4:+48394249 Msa0166800:CDS
TCCTAAATCAGGCTCTCAGT+GGG 0.591373 1_4:+48398933 Msa0166800:CDS
AAGTCTCCCACCGGATGTGT+CGG 0.592788 1_4:+48400497 Msa0166800:CDS
AGTGCTTCAGGAAGCAACAA+TGG 0.594073 1_4:+48401037 Msa0166800:CDS
AGATACGACAACAACAATCC+TGG 0.594626 1_4:+48400802 Msa0166800:CDS
AGCGCTGCAATTAATGCTGG+AGG 0.596114 1_4:+48401082 Msa0166800:CDS
TTCCAATGCTGAAATATGCA+GGG 0.597764 1_4:+48399002 Msa0166800:CDS
GCATGTTAGCAACATTGCTG+TGG 0.597791 1_4:-48400883 None:intergenic
AGTGCAATGCCTGATAAACC+AGG 0.599268 1_4:-48396518 None:intergenic
CTGTTGTTGCTCCACACTGT+GGG 0.599543 1_4:+48400954 Msa0166800:CDS
TTGGTGAGGGATTGGTGACG+TGG 0.601091 1_4:-48392520 None:intergenic
ACTGTTGTTGCTCCACACTG+TGG 0.604864 1_4:+48400953 Msa0166800:CDS
TTTGCATTTGAGAGTCAGAA+GGG 0.605063 1_4:-48400167 None:intergenic
TACTTGCTGCTGAACAGAAG+AGG 0.605168 1_4:-48394292 None:intergenic
AATGTTGCAGAACCTGAACT+GGG 0.605954 1_4:-48403314 None:intergenic
GATGCTAGTGGAAATGGAAG+TGG 0.606551 1_4:+48401154 Msa0166800:CDS
TGATGGAGTTAAGGTTGGTG+AGG 0.607226 1_4:+48394254 Msa0166800:CDS
AAAGAAAGGAGAGAAAAGAG+AGG 0.608085 1_4:+48401239 Msa0166800:CDS
ACAAACATAGACAGCAACAA+TGG 0.609596 1_4:+48401106 Msa0166800:CDS
ACAGCAACAATGGACTTGCT+GGG 0.609766 1_4:+48401116 Msa0166800:CDS
GACAACCCCAAACTCATCCC+AGG 0.610162 1_4:-48403368 None:intergenic
CTTGCTGGGAATAGTGGCAG+TGG 0.611874 1_4:+48401130 Msa0166800:CDS
GATATTCAATCTCATTCTAG+TGG 0.613980 1_4:+48400575 Msa0166800:CDS
TTTGTGCGACAGTCCTCGAA+TGG 0.614472 1_4:+48402889 Msa0166800:CDS
TTTAAACTGAGCTCAAGAGA+TGG 0.614604 1_4:-48400270 None:intergenic
AGCTATATATATAAGTGGAG+AGG 0.615242 1_4:-48403407 None:intergenic
CAACGCAGTGACAATATGGC+GGG 0.615660 1_4:-48394409 None:intergenic
GTTTGGTCACCGCAACGGGT+AGG 0.616084 1_4:-48403292 None:intergenic
TGGTGACGTGGATGAAGTGG+AGG 0.616745 1_4:-48392508 None:intergenic
AATGGTGACTGTAAAGAACT+TGG 0.617086 1_4:+48394150 Msa0166800:CDS
GTTCTGCAACATTATAGAGA+CGG 0.618524 1_4:+48403324 Msa0166800:three_prime_UTR
CTCGAATGGTAATGCAAGTG+AGG 0.619394 1_4:+48402903 Msa0166800:CDS
GCCCCTTGAGACTGTTGCTG+CGG 0.622409 1_4:-48394315 None:intergenic
ATGTGAGACAACTTGTTGAG+AGG 0.623924 1_4:-48400771 None:intergenic
AAATGAAGGAGTAGCTGGAG+AGG 0.626419 1_4:+48394203 Msa0166800:CDS
AGTGGCAGTGGTGATGCTAG+TGG 0.626932 1_4:+48401142 Msa0166800:CDS
GAACAACGACCACGATATCG+AGG 0.628327 1_4:+48402862 Msa0166800:CDS
GATGGTAGTGACAATGGTAG+TGG 0.629804 1_4:+48397273 Msa0166800:CDS
ACAAATTGCCCTCGATATCG+TGG 0.630115 1_4:-48402871 None:intergenic
GTTGCTTCCGACACATCCGG+TGG 0.630609 1_4:-48400504 None:intergenic
TGTTCAAGACCTACCCGTTG+CGG 0.631381 1_4:+48403283 Msa0166800:three_prime_UTR
ACTTCTAAGCTGTTATTAGG+CGG 0.632200 1_4:-48400530 None:intergenic
TTAGGCCTGAACAATGGTGA+TGG 0.633257 1_4:+48397255 Msa0166800:CDS
AGATTATGGGCCACCCAACA+CGG 0.633500 1_4:+48396549 Msa0166800:CDS
GGCACCACCTAAAATTGACA+AGG 0.635166 1_4:+48400823 Msa0166800:CDS
CGTGGATAAGATCAAAAGAA+GGG 0.635974 1_4:-48392419 None:intergenic
CAAAGGTACTAATAATGATG+AGG 0.638016 1_4:+48400242 Msa0166800:CDS
ACACTGTGGGTCATCAAATG+TGG 0.640190 1_4:+48400967 Msa0166800:CDS
AGACACTCCTTTAAGACTGG+AGG 0.640992 1_4:-48399036 None:intergenic
GCGCTGCAATTAATGCTGGA+GGG 0.641325 1_4:+48401083 Msa0166800:CDS
TTTGCTCATTGAATTTAGAG+GGG 0.646894 1_4:-48400056 None:intergenic
GTCCTAAATCAGGCTCTCAG+TGG 0.647285 1_4:+48398932 Msa0166800:CDS
AATGGTGATGGTAGTGACAA+TGG 0.650813 1_4:+48397267 Msa0166800:CDS
TCACAGAGCATTTGACACAA+TGG 0.656014 1_4:+48402941 Msa0166800:three_prime_UTR
AGACTTCTTAGCATTGAAGG+TGG 0.657516 1_4:-48400480 None:intergenic
AGTTATAAGAGAGCCAGCAG+AGG 0.658218 1_4:+48400682 Msa0166800:CDS
TGGCGTTTGGGATAACCGGA+CGG 0.658886 1_4:+48402961 Msa0166800:three_prime_UTR
TTCTCAGATATTGACAACAA+AGG 0.660645 1_4:+48400225 Msa0166800:CDS
AATGCTAAGAAGTCTCCCAC+CGG 0.662726 1_4:+48400488 Msa0166800:CDS
ACCGCAGCAACAGTCTCAAG+GGG 0.669084 1_4:+48394314 Msa0166800:CDS
GGAAGTTTAGGCCTGAACAA+TGG 0.671051 1_4:+48397249 Msa0166800:CDS
AACAACGACCACGATATCGA+GGG 0.671078 1_4:+48402863 Msa0166800:CDS
GGATAAGATCAAAAGAAGGG+TGG 0.680724 1_4:-48392416 None:intergenic
TTGCTTCCGACACATCCGGT+GGG 0.683631 1_4:-48400503 None:intergenic
GCAACGCAGTGACAATATGG+CGG 0.685975 1_4:-48394410 None:intergenic
CATGTCAACAGACTTGATGT+GGG 0.686791 1_4:+48400033 Msa0166800:CDS
GCAATGATTTGATGATGACG+TGG 0.691661 1_4:-48392437 None:intergenic
ACATTTGATGACCCACAGTG+TGG 0.694810 1_4:-48400965 None:intergenic
TCTGACTCTCAAATGCAAAG+CGG 0.707947 1_4:+48400171 Msa0166800:CDS
GAGCTTAGGAGAAGATAATG+CGG 0.718976 1_4:-48392567 None:intergenic
CTTGTTGAGAGGTACACATG+AGG 0.720635 1_4:-48400760 None:intergenic
GCACCACCTAAAATTGACAA+GGG 0.725107 1_4:+48400824 Msa0166800:CDS
TGGAAATATCTCTCTCCACG+TGG 0.727285 1_4:+48392465 Msa0166800:five_prime_UTR
AATGTTCCAAATGTGCCACG+TGG 0.756293 1_4:-48392480 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTAATTAAGATAAGAT+AGG - chr1_4:48393721-48393740 None:intergenic 10.0%
!! GAAAAAAAAGATTAATAATA+TGG - chr1_4:48401373-48401392 None:intergenic 10.0%
!! TTATAATAATGACTTAGTAA+TGG + chr1_4:48392715-48392734 Msa0166800:five_prime_UTR 15.0%
!!! TTATTGAAATTTTTAGTGTT+TGG + chr1_4:48393371-48393390 Msa0166800:intron 15.0%
!!! ATATCTCATTTAATCTTTTT+TGG - chr1_4:48394910-48394929 None:intergenic 15.0%
!! AGTATAATATTGTTTATGTT+AGG + chr1_4:48396193-48396212 Msa0166800:intron 15.0%
!! GTATAATATTGTTTATGTTA+GGG + chr1_4:48396194-48396213 Msa0166800:intron 15.0%
!! TAATATATATAGCTATGTAT+TGG - chr1_4:48396892-48396911 None:intergenic 15.0%
!!! TCTATCCAAATTTTTTTAAA+AGG - chr1_4:48397009-48397028 None:intergenic 15.0%
!!! TTATGTATGTAATATTTTGT+TGG + chr1_4:48397312-48397331 Msa0166800:intron 15.0%
!! AAATACTATAAGTCAAATTA+TGG - chr1_4:48397899-48397918 None:intergenic 15.0%
!! AAATTAAAATATTGTACACA+TGG - chr1_4:48399482-48399501 None:intergenic 15.0%
!! TTAAATAAGGAAATTAACAT+AGG - chr1_4:48399519-48399538 None:intergenic 15.0%
!!! ACTTATAAGTATTTTTTTAC+AGG + chr1_4:48400450-48400469 Msa0166800:intron 15.0%
!! CTAATGTGTAATTAAATATT+TGG + chr1_4:48403045-48403064 Msa0166800:intron 15.0%
!! AGAAAATAGTTTGACAAAAA+TGG - chr1_4:48392615-48392634 None:intergenic 20.0%
!! AATAATCGGTAATTGAATTA+TGG - chr1_4:48392653-48392672 None:intergenic 20.0%
!! TACTACATCATAGTAATAAT+CGG - chr1_4:48392667-48392686 None:intergenic 20.0%
!! TTAAGTAATTCACCTTAATT+AGG + chr1_4:48393035-48393054 Msa0166800:intron 20.0%
!! TAAGTAATTCACCTTAATTA+GGG + chr1_4:48393036-48393055 Msa0166800:intron 20.0%
!! TTTCAAAGTTACTTCAATTA+AGG + chr1_4:48393059-48393078 Msa0166800:intron 20.0%
!!! TAATTTTTTCCAAGATAACA+TGG + chr1_4:48393460-48393479 Msa0166800:intron 20.0%
!!! AATTTTTTCCAAGATAACAT+GGG + chr1_4:48393461-48393480 Msa0166800:intron 20.0%
!! TAGCTTATCAAAATAAGAAT+AGG + chr1_4:48393533-48393552 Msa0166800:intron 20.0%
!! TATAAGTTTGTGAGAAAAAA+AGG + chr1_4:48393571-48393590 Msa0166800:intron 20.0%
!!! CTATCATCTATTTTTTGTTA+TGG + chr1_4:48393860-48393879 Msa0166800:intron 20.0%
!!! GTTTTATTGAAATACTCTTA+AGG + chr1_4:48394512-48394531 Msa0166800:intron 20.0%
!!! AATTAATTGAAGAGTATGTT+AGG - chr1_4:48394799-48394818 None:intergenic 20.0%
!! TTCTATGATAATAAATACTC+AGG - chr1_4:48394976-48394995 None:intergenic 20.0%
!!! ATATATTCAAGTGTTGTATT+TGG - chr1_4:48395142-48395161 None:intergenic 20.0%
!! AAAATTAAAGAAAAATAGGC+AGG - chr1_4:48396355-48396374 None:intergenic 20.0%
!! GAGGAAAATTAAAGAAAAAT+AGG - chr1_4:48396359-48396378 None:intergenic 20.0%
!! TAAAATGAGATCAATATGAT+TGG - chr1_4:48396483-48396502 None:intergenic 20.0%
!! TAAAACAGTAATGTAATGTT+AGG - chr1_4:48396859-48396878 None:intergenic 20.0%
!!! ATCCAAATTTTTTTAAAAGG+TGG - chr1_4:48397006-48397025 None:intergenic 20.0%
!!! AAGTTTTTGTGATATTTTCA+TGG + chr1_4:48397048-48397067 Msa0166800:intron 20.0%
!!! TGAAAAGTTTGATAACAATT+CGG + chr1_4:48397203-48397222 Msa0166800:CDS 20.0%
!!! ATCTTCTGGAAAAATAATTA+TGG - chr1_4:48397581-48397600 None:intergenic 20.0%
!!! TGTTCTTATTTTTGTCATTT+TGG + chr1_4:48397634-48397653 Msa0166800:intron 20.0%
!! ATAATGATAACTAAGTAGTA+TGG + chr1_4:48398155-48398174 Msa0166800:intron 20.0%
!! TCGTATAATATCTTTATATC+AGG - chr1_4:48398247-48398266 None:intergenic 20.0%
!! ATATAAAGATATTATACGAG+TGG + chr1_4:48398248-48398267 Msa0166800:intron 20.0%
!!! TTTTCAACACAATATAATGT+TGG - chr1_4:48398388-48398407 None:intergenic 20.0%
!!! CATTTTTACATTATGTGAAA+AGG - chr1_4:48398440-48398459 None:intergenic 20.0%
!! TAGTTTAAACTTTAATGCAA+AGG + chr1_4:48398607-48398626 Msa0166800:intron 20.0%
!!! ATAACACAAATACAGTTTTT+GGG - chr1_4:48399145-48399164 None:intergenic 20.0%
!! TTTAAACAATTTCTTCATGA+TGG + chr1_4:48399287-48399306 Msa0166800:intron 20.0%
!!! ATTTAGATTTTGAATTCATC+TGG + chr1_4:48399408-48399427 Msa0166800:intron 20.0%
!!! TTTAGATTTTGAATTCATCT+GGG + chr1_4:48399409-48399428 Msa0166800:intron 20.0%
!! GATAATTTACTGTAAAAATG+CGG + chr1_4:48399984-48400003 Msa0166800:intron 20.0%
!!! ATTCTGAGTTTTTTTGAAAA+TGG + chr1_4:48400407-48400426 Msa0166800:intron 20.0%
!!! TTCTGAGTTTTTTTGAAAAT+GGG + chr1_4:48400408-48400427 Msa0166800:intron 20.0%
!!! TTTTTGGCGAAATTTAATTA+GGG - chr1_4:48401221-48401240 None:intergenic 20.0%
!!! TTTTTTGGCGAAATTTAATT+AGG - chr1_4:48401222-48401241 None:intergenic 20.0%
!! TTATTCATTGAGCTTAAATA+TGG + chr1_4:48401312-48401331 Msa0166800:intron 20.0%
!!! AAAACATCATATTCTTTTGT+GGG - chr1_4:48401344-48401363 None:intergenic 20.0%
!!! AAAAACATCATATTCTTTTG+TGG - chr1_4:48401345-48401364 None:intergenic 20.0%
!!! AGATAGTTTAAACAGTTTTT+GGG - chr1_4:48401498-48401517 None:intergenic 20.0%
!! TAAAATATGCATCCATTATA+AGG + chr1_4:48402332-48402351 Msa0166800:intron 20.0%
!!! TTTTATATATTGCCTTCATA+TGG - chr1_4:48402464-48402483 None:intergenic 20.0%
!! AAAAACTGATATTTGATATG+CGG + chr1_4:48402480-48402499 Msa0166800:intron 20.0%
!! ATGAGAATTAATAGAAACTA+TGG - chr1_4:48403146-48403165 None:intergenic 20.0%
!! AAAACAGCTATATATATAAG+TGG - chr1_4:48403415-48403434 None:intergenic 20.0%
! AAGAAAAAAATGTTGAGCTT+AGG - chr1_4:48392584-48392603 None:intergenic 25.0%
!!! TGAATTTTTGTTTAGTGTGA+AGG + chr1_4:48392873-48392892 Msa0166800:intron 25.0%
!!! TAACTTTGAAACCCTAATTA+AGG - chr1_4:48393050-48393069 None:intergenic 25.0%
! ACTTCAATTAAGGAATAGAT+TGG + chr1_4:48393069-48393088 Msa0166800:intron 25.0%
! AAGCTATAAGCTCAAATAAT+TGG - chr1_4:48393168-48393187 None:intergenic 25.0%
! AAAAAATAAGCCAATCCAAA+CGG + chr1_4:48393257-48393276 Msa0166800:intron 25.0%
! TTTACCAAACAAAGCATATA+AGG - chr1_4:48393332-48393351 None:intergenic 25.0%
!! CTTTGTTTGGTAAAAAATAG+TGG + chr1_4:48393338-48393357 Msa0166800:intron 25.0%
! GGTAAAATTGAGAGAAAAAA+TGG + chr1_4:48393482-48393501 Msa0166800:intron 25.0%
! GAGAAAAAATGGTAAGTTAT+AGG + chr1_4:48393493-48393512 Msa0166800:intron 25.0%
!! ATGACAAAAAAAGACTTGTT+TGG - chr1_4:48393599-48393618 None:intergenic 25.0%
!!! GAACAAAGCCTTTTTAATTT+TGG + chr1_4:48393882-48393901 Msa0166800:intron 25.0%
! TTTACATATTAGATCCCTTA+AGG + chr1_4:48394359-48394378 Msa0166800:CDS 25.0%
! TAACATTAAGAACAAACTTG+TGG + chr1_4:48394554-48394573 Msa0166800:intron 25.0%
! ATAATACTACTCTGATTTAC+TGG + chr1_4:48394683-48394702 Msa0166800:intron 25.0%
! ATTTACTGGAATATAAGGAA+TGG + chr1_4:48394697-48394716 Msa0166800:intron 25.0%
! ACTTGTTTCATAAAGATAAG+TGG - chr1_4:48394842-48394861 None:intergenic 25.0%
! TAGAGAGATATCTATACAAT+AGG + chr1_4:48395005-48395024 Msa0166800:intron 25.0%
! GTATTGCAATTTACATACAA+TGG + chr1_4:48395485-48395504 Msa0166800:intron 25.0%
! TACAAATTTCTCAAAACCTT+AGG - chr1_4:48395814-48395833 None:intergenic 25.0%
! ATTAGTCCATGATGTTTAAT+TGG + chr1_4:48396039-48396058 Msa0166800:intron 25.0%
! TTAGTCCATGATGTTTAATT+GGG + chr1_4:48396040-48396059 Msa0166800:intron 25.0%
! AAATTCTAATTCTAGTGAGT+TGG + chr1_4:48396130-48396149 Msa0166800:intron 25.0%
!! TATCAGTATTGAAAATCACT+TGG + chr1_4:48396304-48396323 Msa0166800:intron 25.0%
! ATCTGTTTCAAAAACAATTG+AGG - chr1_4:48396378-48396397 None:intergenic 25.0%
!!! TATTGATCTCATTTTAACTG+AGG + chr1_4:48396487-48396506 Msa0166800:CDS 25.0%
! TGGAAAAACTTACTAATTAC+TGG - chr1_4:48396584-48396603 None:intergenic 25.0%
!!! AGCCACCTTTTAAAAAAATT+TGG + chr1_4:48397001-48397020 Msa0166800:intron 25.0%
! GTCATAATTAACAAAGTAAC+TGG - chr1_4:48397097-48397116 None:intergenic 25.0%
! CCTTGATTTAATAGATTTCT+GGG - chr1_4:48397178-48397197 None:intergenic 25.0%
! TCCTTGATTTAATAGATTTC+TGG - chr1_4:48397179-48397198 None:intergenic 25.0%
!! GAAAAGTTTGATAACAATTC+GGG + chr1_4:48397204-48397223 Msa0166800:CDS 25.0%
! ATATTATCATTTCATCACGA+TGG + chr1_4:48397385-48397404 Msa0166800:intron 25.0%
! ACTATAAGTCAAATTATGGA+AGG - chr1_4:48397895-48397914 None:intergenic 25.0%
!!! TCCCTCTATTTCTAATTATT+GGG + chr1_4:48397926-48397945 Msa0166800:intron 25.0%
! GTCTTGTATTCCTTTAAATA+GGG - chr1_4:48398096-48398115 None:intergenic 25.0%
!! AGTCTTGTATTCCTTTAAAT+AGG - chr1_4:48398097-48398116 None:intergenic 25.0%
! ACTCTTGATCCTAAATAAAT+AGG + chr1_4:48398114-48398133 Msa0166800:intron 25.0%
! CTCTTGATCCTAAATAAATA+GGG + chr1_4:48398115-48398134 Msa0166800:intron 25.0%
! CATGATTTCCCTATTTATTT+AGG - chr1_4:48398126-48398145 None:intergenic 25.0%
!! TAGTTTGAAACGATTATCTA+AGG + chr1_4:48398182-48398201 Msa0166800:intron 25.0%
! ACTTACTCAAATAAAAGAAG+GGG - chr1_4:48398299-48398318 None:intergenic 25.0%
! CACTTACTCAAATAAAAGAA+GGG - chr1_4:48398300-48398319 None:intergenic 25.0%
! TTTAAACTTTAATGCAAAGG+TGG + chr1_4:48398610-48398629 Msa0166800:intron 25.0%
! GCTAGTATTTGATAAAGTAA+AGG + chr1_4:48398688-48398707 Msa0166800:intron 25.0%
! CCAAATGTTTGATCAATTAA+AGG - chr1_4:48398734-48398753 None:intergenic 25.0%
! CCTTTAATTGATCAAACATT+TGG + chr1_4:48398731-48398750 Msa0166800:intron 25.0%
! TAGTTAGTAATGTCATATAG+AGG + chr1_4:48398812-48398831 Msa0166800:intron 25.0%
!! CATAACACAAATACAGTTTT+TGG - chr1_4:48399146-48399165 None:intergenic 25.0%
!! AACATAACTTGTAATTCAAC+AGG - chr1_4:48399252-48399271 None:intergenic 25.0%
!! GAATTACAAGTTATGTTTTG+TGG + chr1_4:48399255-48399274 Msa0166800:intron 25.0%
! TCATAATGAAAACAATGAAG+AGG - chr1_4:48399326-48399345 None:intergenic 25.0%
! AGGAAATTAACATAGGAATA+GGG - chr1_4:48399512-48399531 None:intergenic 25.0%
! AAGGAAATTAACATAGGAAT+AGG - chr1_4:48399513-48399532 None:intergenic 25.0%
! ATCAGATGCACTATTAAATA+AGG - chr1_4:48399532-48399551 None:intergenic 25.0%
! TATTTAATAGTGCATCTGAT+AGG + chr1_4:48399532-48399551 Msa0166800:intron 25.0%
!!! ATTAGTTTTAATTGCTGATG+TGG + chr1_4:48399652-48399671 Msa0166800:intron 25.0%
! TAATTGCATATACAAATTGC+TGG - chr1_4:48399835-48399854 None:intergenic 25.0%
! ATTTGCTCATTGAATTTAGA+GGG - chr1_4:48400060-48400079 None:intergenic 25.0%
!! AATTTGCTCATTGAATTTAG+AGG - chr1_4:48400061-48400080 None:intergenic 25.0%
! TTCAATGAGCAAATTAATAG+AGG + chr1_4:48400066-48400085 Msa0166800:CDS 25.0%
!!! AGTCATTTTCTTTGAAGATT+CGG - chr1_4:48400936-48400955 None:intergenic 25.0%
! ATCAAAACAAGAATTCTCAA+AGG + chr1_4:48401188-48401207 Msa0166800:CDS 25.0%
! TCAAAACAAGAATTCTCAAA+GGG + chr1_4:48401189-48401208 Msa0166800:CDS 25.0%
! TAAATTTCGCCAAAAAAGAA+AGG + chr1_4:48401225-48401244 Msa0166800:CDS 25.0%
!!! GCATATTTTTGTCAGAAATA+GGG - chr1_4:48401404-48401423 None:intergenic 25.0%
!! CAGATAGTTTAAACAGTTTT+TGG - chr1_4:48401499-48401518 None:intergenic 25.0%
! TGTTTAAACTATCTGTTGTA+TGG + chr1_4:48401504-48401523 Msa0166800:intron 25.0%
! TGTTGTATGGATATACTAAT+AGG + chr1_4:48401517-48401536 Msa0166800:intron 25.0%
! AAATCTGTATTTACTGAAGT+TGG - chr1_4:48401591-48401610 None:intergenic 25.0%
! TCAGTAAATACAGATTTCTA+AGG + chr1_4:48401594-48401613 Msa0166800:intron 25.0%
! ATCCTAATTCTACTTCAAAA+GGG - chr1_4:48402054-48402073 None:intergenic 25.0%
! AAAGAATTGATACAGTATGT+TGG + chr1_4:48402092-48402111 Msa0166800:intron 25.0%
! TCAGTTTAACAAAATCTAAC+TGG - chr1_4:48402422-48402441 None:intergenic 25.0%
!! AGATTTTGTTAAACTGAGAA+TGG + chr1_4:48402425-48402444 Msa0166800:intron 25.0%
!! GATTTTGTTAAACTGAGAAT+GGG + chr1_4:48402426-48402445 Msa0166800:intron 25.0%
!!! ACTTCATTTAGTTTTGCTTT+TGG + chr1_4:48402583-48402602 Msa0166800:CDS 25.0%
!!! CTTCATTTAGTTTTGCTTTT+GGG + chr1_4:48402584-48402603 Msa0166800:CDS 25.0%
! GTTTGGCATTTCTATAAAAT+AGG + chr1_4:48402663-48402682 Msa0166800:intron 25.0%
! ATGTATATTATACTTCACAC+AGG + chr1_4:48402692-48402711 Msa0166800:intron 25.0%
! TGTATATTATACTTCACACA+GGG + chr1_4:48402693-48402712 Msa0166800:intron 25.0%
! AAATATTACATGAAGACTTC+TGG - chr1_4:48402995-48403014 None:intergenic 25.0%
! AGAAGTCTTCATGTAATATT+TGG + chr1_4:48402994-48403013 Msa0166800:intron 25.0%
! GAAGTCTTCATGTAATATTT+GGG + chr1_4:48402995-48403014 Msa0166800:intron 25.0%
TAGTGATACTTATTATGAGC+TGG + chr1_4:48392742-48392761 Msa0166800:five_prime_UTR 30.0%
!! GTTTTGGATGTTTATGTTCA+AGG + chr1_4:48392929-48392948 Msa0166800:five_prime_UTR 30.0%
AATAAAACACAGTTATGCAC+AGG - chr1_4:48393001-48393020 None:intergenic 30.0%
AACAAATTGTTACCAACAAG+GGG - chr1_4:48393283-48393302 None:intergenic 30.0%
GAACAAATTGTTACCAACAA+GGG - chr1_4:48393284-48393303 None:intergenic 30.0%
AGAACAAATTGTTACCAACA+AGG - chr1_4:48393285-48393304 None:intergenic 30.0%
! ACTACCTTATATGCTTTGTT+TGG + chr1_4:48393325-48393344 Msa0166800:intron 30.0%
! CAATTTTACCCATGTTATCT+TGG - chr1_4:48393472-48393491 None:intergenic 30.0%
AGGCTTATCAAAAAATGCTA+TGG - chr1_4:48393669-48393688 None:intergenic 30.0%
GATAAAAAATGATAAGCTGC+AGG - chr1_4:48393689-48393708 None:intergenic 30.0%
!!! AGCCTTTTTAATTTTGGTTG+AGG + chr1_4:48393888-48393907 Msa0166800:intron 30.0%
AGCCTCAACCAAAATTAAAA+AGG - chr1_4:48393893-48393912 None:intergenic 30.0%
GGTTGTGTGAGTAAAAAATA+TGG + chr1_4:48393931-48393950 Msa0166800:intron 30.0%
GATGATGAAGTGAAATGTAA+TGG + chr1_4:48394225-48394244 Msa0166800:CDS 30.0%
TCTTAAATGCATTTCTAAGC+TGG + chr1_4:48394577-48394596 Msa0166800:intron 30.0%
CTTAAATGCATTTCTAAGCT+GGG + chr1_4:48394578-48394597 Msa0166800:intron 30.0%
CTCTGATTTACTGGAATATA+AGG + chr1_4:48394692-48394711 Msa0166800:intron 30.0%
TCATAAAGATAAGTGGTTCT+TGG - chr1_4:48394835-48394854 None:intergenic 30.0%
ATCTATACAATAGGTTATGC+AGG + chr1_4:48395014-48395033 Msa0166800:intron 30.0%
! AATCTCTTGATGATCATTGA+AGG - chr1_4:48395404-48395423 None:intergenic 30.0%
TTCAATGATCATCAAGAGAT+TGG + chr1_4:48395403-48395422 Msa0166800:intron 30.0%
TTGCAGTAAATAATGTGTGT+TGG - chr1_4:48395437-48395456 None:intergenic 30.0%
ACACACATTATTTACTGCAA+TGG + chr1_4:48395437-48395456 Msa0166800:intron 30.0%
TACAATGGATCAAAATAGAG+TGG + chr1_4:48395500-48395519 Msa0166800:intron 30.0%
ACAATGGATCAAAATAGAGT+GGG + chr1_4:48395501-48395520 Msa0166800:intron 30.0%
AATGCCAAAACATCCTAATT+CGG - chr1_4:48395546-48395565 None:intergenic 30.0%
GAAATTTGTAATCCAGATGA+TGG + chr1_4:48395824-48395843 Msa0166800:intron 30.0%
GTTCAGTTGAAAGAAAACAT+AGG - chr1_4:48395993-48396012 None:intergenic 30.0%
AAAGTAGCTCTTATAAGACT+TGG + chr1_4:48396084-48396103 Msa0166800:intron 30.0%
AAGTAGCTCTTATAAGACTT+GGG + chr1_4:48396085-48396104 Msa0166800:intron 30.0%
TGCACTTCTATACAAGATTA+TGG + chr1_4:48396535-48396554 Msa0166800:CDS 30.0%
GCACTTCTATACAAGATTAT+GGG + chr1_4:48396536-48396555 Msa0166800:CDS 30.0%
TGCTCAAACCAAACATATAT+AGG - chr1_4:48396611-48396630 None:intergenic 30.0%
TAAAAGAGCTACTCTTTCTA+TGG + chr1_4:48396653-48396672 Msa0166800:intron 30.0%
AGTCTTTAAGTGTTTGTCAA+AGG + chr1_4:48396727-48396746 Msa0166800:CDS 30.0%
GTCTTTAAGTGTTTGTCAAA+GGG + chr1_4:48396728-48396747 Msa0166800:CDS 30.0%
CCCAGAAATCTATTAAATCA+AGG + chr1_4:48397175-48397194 Msa0166800:CDS 30.0%
GACATGTTAAAACTTCTTGT+TGG + chr1_4:48397552-48397571 Msa0166800:intron 30.0%
CAAAAATGAAACACATCTTC+TGG - chr1_4:48397595-48397614 None:intergenic 30.0%
! CAGAAGATGTGTTTCATTTT+TGG + chr1_4:48397593-48397612 Msa0166800:intron 30.0%
CCTAGATGATAATAAGTAAG+TGG - chr1_4:48397872-48397891 None:intergenic 30.0%
CCACTTACTTATTATCATCT+AGG + chr1_4:48397869-48397888 Msa0166800:intron 30.0%
!! CTCCCTCTATTTCTAATTAT+TGG + chr1_4:48397925-48397944 Msa0166800:intron 30.0%
GCCCAATAATTAGAAATAGA+GGG - chr1_4:48397930-48397949 None:intergenic 30.0%
AGCCCAATAATTAGAAATAG+AGG - chr1_4:48397931-48397950 None:intergenic 30.0%
!!! TGAAGTTTTGGGTTTTAGAT+AGG + chr1_4:48397994-48398013 Msa0166800:intron 30.0%
AACACTAACTCCCTATTTAA+AGG + chr1_4:48398083-48398102 Msa0166800:intron 30.0%
TTACTCAAATAAAAGAAGGG+GGG - chr1_4:48398297-48398316 None:intergenic 30.0%
CTTACTCAAATAAAAGAAGG+GGG - chr1_4:48398298-48398317 None:intergenic 30.0%
GCACTTACTCAAATAAAAGA+AGG - chr1_4:48398301-48398320 None:intergenic 30.0%
ATAATGTGTATCAGAGAAGT+AGG + chr1_4:48398325-48398344 Msa0166800:intron 30.0%
TGTTGGAATATTTCACTTCT+CGG - chr1_4:48398371-48398390 None:intergenic 30.0%
ACTTGTAATTGTGTAACTGT+CGG + chr1_4:48398407-48398426 Msa0166800:intron 30.0%
! GCTTTTGTGGAATTAATAAC+AGG + chr1_4:48398560-48398579 Msa0166800:intron 30.0%
AGTTTAAACTAATCCCAACA+CGG - chr1_4:48398598-48398617 None:intergenic 30.0%
! TGAAATTGACAAGCAGTTTT+TGG - chr1_4:48398858-48398877 None:intergenic 30.0%
CTAGAGAAAAAGGAACAAAT+AGG + chr1_4:48399057-48399076 Msa0166800:CDS 30.0%
AAAAATAAAACCCACGAGTA+TGG - chr1_4:48399351-48399370 None:intergenic 30.0%
!!! ATACTCGTGGGTTTTATTTT+TGG + chr1_4:48399350-48399369 Msa0166800:intron 30.0%
!!! ATTTTTGGAACTTCATTCAC+CGG + chr1_4:48399365-48399384 Msa0166800:intron 30.0%
ATCTGATAGGATAGAATACT+GGG + chr1_4:48399545-48399564 Msa0166800:intron 30.0%
TATTACTCTGCCCAATATTT+GGG - chr1_4:48399582-48399601 None:intergenic 30.0%
AGAGTAATAGGATAGAATAC+TGG + chr1_4:48399593-48399612 Msa0166800:intron 30.0%
GAGTAATAGGATAGAATACT+GGG + chr1_4:48399594-48399613 Msa0166800:intron 30.0%
TTTGCTCATTGAATTTAGAG+GGG - chr1_4:48400059-48400078 None:intergenic 30.0%
! CAGATTGATTCTCACAATTA+GGG - chr1_4:48400101-48400120 None:intergenic 30.0%
TTGTCAATATCTGAGAAGTT+GGG - chr1_4:48400222-48400241 None:intergenic 30.0%
TTCTCAGATATTGACAACAA+AGG + chr1_4:48400225-48400244 Msa0166800:CDS 30.0%
!! CAAAGGTACTAATAATGATG+AGG + chr1_4:48400242-48400261 Msa0166800:CDS 30.0%
GTAACTTCTAAGCTGTTATT+AGG - chr1_4:48400536-48400555 None:intergenic 30.0%
GATATTCAATCTCATTCTAG+TGG + chr1_4:48400575-48400594 Msa0166800:CDS 30.0%
AGACGTTTGGTACAAAAATT+TGG - chr1_4:48400717-48400736 None:intergenic 30.0%
!!! CACATGAGGTTGTTTTTTAT+GGG - chr1_4:48400749-48400768 None:intergenic 30.0%
!!! ACACATGAGGTTGTTTTTTA+TGG - chr1_4:48400750-48400769 None:intergenic 30.0%
! CTTTTCTCTCCTTTCTTTTT+TGG - chr1_4:48401237-48401256 None:intergenic 30.0%
!! GGCATATTTTTGTCAGAAAT+AGG - chr1_4:48401405-48401424 None:intergenic 30.0%
ATGGATATACTAATAGGAAC+AGG + chr1_4:48401523-48401542 Msa0166800:intron 30.0%
GACATCATACGAAAATATTG+TGG + chr1_4:48401545-48401564 Msa0166800:intron 30.0%
!! TTTGATGTTGAGTTGAACTA+GGG + chr1_4:48401976-48401995 Msa0166800:intron 30.0%
!!! TACCCTTTTGAAGTAGAATT+AGG + chr1_4:48402049-48402068 Msa0166800:intron 30.0%
CATCCTAATTCTACTTCAAA+AGG - chr1_4:48402055-48402074 None:intergenic 30.0%
AAGTAGAATTAGGATGATGT+AGG + chr1_4:48402059-48402078 Msa0166800:intron 30.0%
AACAAGAAATGGAGATAAGA+AGG - chr1_4:48402157-48402176 None:intergenic 30.0%
!! ACAGTTTTATACCTCAAAGA+TGG - chr1_4:48402264-48402283 None:intergenic 30.0%
CTTTGACATATTTCAAGACA+TGG - chr1_4:48402386-48402405 None:intergenic 30.0%
ATGTTCTTGATACCATATGA+AGG + chr1_4:48402449-48402468 Msa0166800:intron 30.0%
ACATTTATCCTCATATGGAT+AGG - chr1_4:48402630-48402649 None:intergenic 30.0%
! TCCTGTTATGATCTGTATTT+TGG + chr1_4:48402781-48402800 Msa0166800:intron 30.0%
TCCAAAATACAGATCATAAC+AGG - chr1_4:48402785-48402804 None:intergenic 30.0%
CTCAACATGATTTGAATTTC+AGG + chr1_4:48402810-48402829 Msa0166800:intron 30.0%
TGTCACAACAGAAATGTATT+CGG - chr1_4:48403074-48403093 None:intergenic 30.0%
GCTATATATATAAGTGGAGA+GGG - chr1_4:48403409-48403428 None:intergenic 30.0%
AGCTATATATATAAGTGGAG+AGG - chr1_4:48403410-48403429 None:intergenic 30.0%
CGTGGATAAGATCAAAAGAA+GGG - chr1_4:48392422-48392441 None:intergenic 35.0%
ACGTGGATAAGATCAAAAGA+AGG - chr1_4:48392423-48392442 None:intergenic 35.0%
TCGTATGACTAAAGTAGACT+TGG + chr1_4:48393202-48393221 Msa0166800:intron 35.0%
CGTATGACTAAAGTAGACTT+GGG + chr1_4:48393203-48393222 Msa0166800:intron 35.0%
GTATGACTAAAGTAGACTTG+GGG + chr1_4:48393204-48393223 Msa0166800:intron 35.0%
AATGCAAGATTTCGAGCTTA+TGG - chr1_4:48393635-48393654 None:intergenic 35.0%
! CGAATTGATTTCGTAGTGTT+TGG - chr1_4:48393813-48393832 None:intergenic 35.0%
TAGTGTCTTGCAGTTGTATT+TGG + chr1_4:48394016-48394035 Msa0166800:intron 35.0%
AGTGTCTTGCAGTTGTATTT+GGG + chr1_4:48394017-48394036 Msa0166800:intron 35.0%
!!! TAGCATTTGCTGTTTTGCTT+TGG + chr1_4:48394059-48394078 Msa0166800:five_prime_UTR 35.0%
GTTATAATTATCGCGAGCTT+GGG + chr1_4:48394092-48394111 Msa0166800:five_prime_UTR 35.0%
! TTGGGCATTTTGAATGACAA+GGG + chr1_4:48394110-48394129 Msa0166800:exon 35.0%
AATGGTGACTGTAAAGAACT+TGG + chr1_4:48394150-48394169 Msa0166800:CDS 35.0%
GGGAAGAACAACTTAAATGA+AGG + chr1_4:48394189-48394208 Msa0166800:CDS 35.0%
AACTTAAATGAAGGAGTAGC+TGG + chr1_4:48394198-48394217 Msa0166800:CDS 35.0%
! AAATGTAATGGAGTGACTGA+TGG + chr1_4:48394237-48394256 Msa0166800:CDS 35.0%
TCAAGGGGCAATTATTTGTT+GGG + chr1_4:48394329-48394348 Msa0166800:CDS 35.0%
CTTCGCAATTGTAGTTATGA+AGG + chr1_4:48394432-48394451 Msa0166800:CDS 35.0%
CTGACAGTTGTAAACAGTTA+GGG - chr1_4:48395053-48395072 None:intergenic 35.0%
ACTGACAGTTGTAAACAGTT+AGG - chr1_4:48395054-48395073 None:intergenic 35.0%
TGTTTACAACTGTCAGTAAC+AGG + chr1_4:48395057-48395076 Msa0166800:intron 35.0%
! AAGTGTTGTATTTGGACCTT+CGG - chr1_4:48395134-48395153 None:intergenic 35.0%
ACTGTTTGACAAGTTGTCAT+TGG - chr1_4:48395212-48395231 None:intergenic 35.0%
GTGAATCTTGAAGATAACAG+TGG + chr1_4:48395253-48395272 Msa0166800:intron 35.0%
ACGATACCATTACAAAACCT+GGG - chr1_4:48395467-48395486 None:intergenic 35.0%
TACGATACCATTACAAAACC+TGG - chr1_4:48395468-48395487 None:intergenic 35.0%
!!! GAATTAGGATGTTTTGGCAT+TGG + chr1_4:48395545-48395564 Msa0166800:intron 35.0%
!! GTTTTGGCATTGGAAATCAT+AGG + chr1_4:48395555-48395574 Msa0166800:intron 35.0%
CATTTGTATACTTCGTGGTT+AGG + chr1_4:48395741-48395760 Msa0166800:intron 35.0%
! ATTTGTAATCCAGATGATGG+TGG + chr1_4:48395827-48395846 Msa0166800:intron 35.0%
! ATGGTGGAATAGTAGGAAAT+AGG + chr1_4:48395843-48395862 Msa0166800:intron 35.0%
TGGTGGAATAGTAGGAAATA+GGG + chr1_4:48395844-48395863 Msa0166800:intron 35.0%
! CAATTAACCCTACCGATTAT+GGG - chr1_4:48395932-48395951 None:intergenic 35.0%
CATAGGTATGTAGTTTAAGC+CGG - chr1_4:48395976-48395995 None:intergenic 35.0%
!! AACTGAACCGTTTTGATGAT+GGG + chr1_4:48396005-48396024 Msa0166800:intron 35.0%
AGACTTGGGCAATTCTTAAT+TGG + chr1_4:48396099-48396118 Msa0166800:intron 35.0%
TCATATGTTCAGTGTTAGAC+TGG + chr1_4:48396221-48396240 Msa0166800:intron 35.0%
! TTGGTCTTTGTTTAGTGGAT+TGG + chr1_4:48396257-48396276 Msa0166800:intron 35.0%
!! AGAAAAATAGGCAGGTTGAT+GGG - chr1_4:48396347-48396366 None:intergenic 35.0%
! AAGAAAAATAGGCAGGTTGA+TGG - chr1_4:48396348-48396367 None:intergenic 35.0%
TCAGTTATTGAAGCAGCAAA+TGG + chr1_4:48396425-48396444 Msa0166800:intron 35.0%
! ATTGCAAGCTTGGAAGATTT+TGG + chr1_4:48396448-48396467 Msa0166800:CDS 35.0%
!!! TGATCTCATTTTAACTGAGG+TGG + chr1_4:48396490-48396509 Msa0166800:CDS 35.0%
TCCAAGTGCCTATATATGTT+TGG + chr1_4:48396600-48396619 Msa0166800:intron 35.0%
ACCAAACATATATAGGCACT+TGG - chr1_4:48396604-48396623 None:intergenic 35.0%
ACTCTTTCTATGGCTTCTAA+TGG + chr1_4:48396663-48396682 Msa0166800:intron 35.0%
CTCTTTCTATGGCTTCTAAT+GGG + chr1_4:48396664-48396683 Msa0166800:intron 35.0%
ATGTCATCTCATGACTCTAT+GGG + chr1_4:48396701-48396720 Msa0166800:CDS 35.0%
TTAAGCTCATTCTTGCGTAT+GGG - chr1_4:48396776-48396795 None:intergenic 35.0%
TTTAAGCTCATTCTTGCGTA+TGG - chr1_4:48396777-48396796 None:intergenic 35.0%
AGAATGAGCTTAAAAACCTG+TGG + chr1_4:48396783-48396802 Msa0166800:CDS 35.0%
!!! TGACAACGTTGATTTTGCAA+AGG - chr1_4:48396946-48396965 None:intergenic 35.0%
TGGATTGTATGAAATGACAC+AGG + chr1_4:48397068-48397087 Msa0166800:intron 35.0%
TTTCTTTCCTTCAGTCTAGT+GGG + chr1_4:48397127-48397146 Msa0166800:intron 35.0%
AGCAATGATGAGCAAGATAA+TGG + chr1_4:48397228-48397247 Msa0166800:CDS 35.0%
!! GAGCAAGATAATGGAAGTTT+AGG + chr1_4:48397237-48397256 Msa0166800:CDS 35.0%
TTGTTGGAAAATCTCATGCA+TGG + chr1_4:48397328-48397347 Msa0166800:intron 35.0%
TATCATTTCATCACGATGGT+TGG + chr1_4:48397389-48397408 Msa0166800:intron 35.0%
ATCATTTCATCACGATGGTT+GGG + chr1_4:48397390-48397409 Msa0166800:intron 35.0%
AAACTCTAGATACCACTTCA+GGG - chr1_4:48397489-48397508 None:intergenic 35.0%
AAACCTAACCTGGAAAAACT+TGG + chr1_4:48397519-48397538 Msa0166800:intron 35.0%
ACAAAAATAAGAACACGCAG+AGG - chr1_4:48397629-48397648 None:intergenic 35.0%
!!! TTGTCATTTTGGACGTCTTA+TGG + chr1_4:48397645-48397664 Msa0166800:intron 35.0%
! TCTCTAAATGGTGCTAAAAG+CGG - chr1_4:48397671-48397690 None:intergenic 35.0%
AGCACCATTTAGAGAGATTT+AGG + chr1_4:48397676-48397695 Msa0166800:intron 35.0%
GCAACCTAAATCTCTCTAAA+TGG - chr1_4:48397683-48397702 None:intergenic 35.0%
!!! TTTTTGAGACTGGAAACACA+AGG - chr1_4:48397732-48397751 None:intergenic 35.0%
TTTCCAGTCTCAAAAACCTT+TGG + chr1_4:48397736-48397755 Msa0166800:intron 35.0%
ATAATTGTACGTCGAGGAAA+AGG - chr1_4:48397791-48397810 None:intergenic 35.0%
! TATTGTGGTGGTTGAAGTTT+TGG + chr1_4:48397982-48398001 Msa0166800:intron 35.0%
! ATTGTGGTGGTTGAAGTTTT+GGG + chr1_4:48397983-48398002 Msa0166800:intron 35.0%
CTTGTAATTGTGTAACTGTC+GGG + chr1_4:48398408-48398427 Msa0166800:intron 35.0%
TTGTAATTGTGTAACTGTCG+GGG + chr1_4:48398409-48398428 Msa0166800:intron 35.0%
! TAATTCCACAAAAGCCGTTT+TGG - chr1_4:48398555-48398574 None:intergenic 35.0%
CAAACAGAAAACACTACAGA+AGG + chr1_4:48398764-48398783 Msa0166800:intron 35.0%
TAGCTTAACAAGAAGACAGA+TGG - chr1_4:48398790-48398809 None:intergenic 35.0%
ATTCCAATGCTGAAATATGC+AGG + chr1_4:48399001-48399020 Msa0166800:CDS 35.0%
TTCCAATGCTGAAATATGCA+GGG + chr1_4:48399002-48399021 Msa0166800:CDS 35.0%
TGAAATATGCAGGGAAAAGA+TGG + chr1_4:48399011-48399030 Msa0166800:CDS 35.0%
!! AAAGGAGTGTCTAGAGAAAA+AGG + chr1_4:48399047-48399066 Msa0166800:CDS 35.0%
CTGTATTTGTGTTATGCTTG+TGG + chr1_4:48399150-48399169 Msa0166800:intron 35.0%
CAGTCAAAATCAAGAAAAGC+TGG - chr1_4:48399198-48399217 None:intergenic 35.0%
TACATGTTCGCTATATGTTG+AGG - chr1_4:48399227-48399246 None:intergenic 35.0%
TCATTATGATACCATACTCG+TGG + chr1_4:48399337-48399356 Msa0166800:intron 35.0%
CATTATGATACCATACTCGT+GGG + chr1_4:48399338-48399357 Msa0166800:intron 35.0%
CATCTGATAGGATAGAATAC+TGG + chr1_4:48399544-48399563 Msa0166800:intron 35.0%
ATAGGATAGAATACTGGGTT+GGG + chr1_4:48399550-48399569 Msa0166800:intron 35.0%
CTATTACTCTGCCCAATATT+TGG - chr1_4:48399583-48399602 None:intergenic 35.0%
CAAATATTGGGCAGAGTAAT+AGG + chr1_4:48399581-48399600 Msa0166800:intron 35.0%
AATAGGATAGAATACTGGGT+TGG + chr1_4:48399598-48399617 Msa0166800:intron 35.0%
ATAGGATAGAATACTGGGTT+GGG + chr1_4:48399550-48399569 Msa0166800:intron 35.0%
CTTTACTCTGCCCAATATTT+GGG - chr1_4:48399631-48399650 None:intergenic 35.0%
TCTTTACTCTGCCCAATATT+TGG - chr1_4:48399632-48399651 None:intergenic 35.0%
AACACATAATCCACAAAACG+AGG - chr1_4:48399906-48399925 None:intergenic 35.0%
!! TTTGAACCTGCAATTTTGAC+TGG - chr1_4:48400012-48400031 None:intergenic 35.0%
GCAAATTAATAGAGGACAGA+TGG + chr1_4:48400074-48400093 Msa0166800:CDS 35.0%
! CCAGATTGATTCTCACAATT+AGG - chr1_4:48400102-48400121 None:intergenic 35.0%
CCTAATTGTGAGAATCAATC+TGG + chr1_4:48400099-48400118 Msa0166800:CDS 35.0%
TTTGCATTTGAGAGTCAGAA+GGG - chr1_4:48400170-48400189 None:intergenic 35.0%
GAAGTTGGGTCTTCTATTTA+GGG - chr1_4:48400208-48400227 None:intergenic 35.0%
AGAAGTTGGGTCTTCTATTT+AGG - chr1_4:48400209-48400228 None:intergenic 35.0%
GTTGTCAATATCTGAGAAGT+TGG - chr1_4:48400223-48400242 None:intergenic 35.0%
TTTAAACTGAGCTCAAGAGA+TGG - chr1_4:48400273-48400292 None:intergenic 35.0%
TTTCTCAAGGTATGGTGATT+TGG + chr1_4:48400371-48400390 Msa0166800:intron 35.0%
!! TGGTGATTTGGTGTTATGTT+TGG + chr1_4:48400383-48400402 Msa0166800:intron 35.0%
ACTTCTAAGCTGTTATTAGG+CGG - chr1_4:48400533-48400552 None:intergenic 35.0%
TGCTAGCAACAACATTGATA+TGG + chr1_4:48400625-48400644 Msa0166800:CDS 35.0%
GCTAGCAACAACATTGATAT+GGG + chr1_4:48400626-48400645 Msa0166800:CDS 35.0%
!! GGTAAAAGCATTATTAGCAG+TGG - chr1_4:48400654-48400673 None:intergenic 35.0%
CTCTCTTATAACTGCAGATT+TGG - chr1_4:48400675-48400694 None:intergenic 35.0%
! CATTGCTGTGGTTTTCATAA+TGG - chr1_4:48400874-48400893 None:intergenic 35.0%
!! AGTATCAATAGAAGTGCTTC+AGG + chr1_4:48401025-48401044 Msa0166800:CDS 35.0%
AATGGAAGCAATGGACAAAA+TGG + chr1_4:48401055-48401074 Msa0166800:CDS 35.0%
ATGGAAGCAATGGACAAAAT+GGG + chr1_4:48401056-48401075 Msa0166800:CDS 35.0%
ACAAACATAGACAGCAACAA+TGG + chr1_4:48401106-48401125 Msa0166800:CDS 35.0%
AAAGAAAGGAGAGAAAAGAG+AGG + chr1_4:48401239-48401258 Msa0166800:CDS 35.0%
TTTCATAAGCAGGTAAACTG+AGG + chr1_4:48401265-48401284 Msa0166800:intron 35.0%
GCTACACATTTAAGGACTAA+AGG - chr1_4:48401426-48401445 None:intergenic 35.0%
! ATTTACTGAAGTTGGTCTCT+GGG - chr1_4:48401583-48401602 None:intergenic 35.0%
! TATTTACTGAAGTTGGTCTC+TGG - chr1_4:48401584-48401603 None:intergenic 35.0%
TGGGATAAATACATATGGTG+GGG - chr1_4:48401748-48401767 None:intergenic 35.0%
GTGGGATAAATACATATGGT+GGG - chr1_4:48401749-48401768 None:intergenic 35.0%
GAAGGTGGGATAAATACATA+TGG - chr1_4:48401753-48401772 None:intergenic 35.0%
TATGTATTTATCCCACCTTC+TGG + chr1_4:48401753-48401772 Msa0166800:intron 35.0%
GAAAAGAGAATACCAAGAGA+AGG - chr1_4:48401838-48401857 None:intergenic 35.0%
! CTTTTCCCTGATTGTATCAT+AGG + chr1_4:48401852-48401871 Msa0166800:intron 35.0%
AACCTCCTATGATACAATCA+GGG - chr1_4:48401860-48401879 None:intergenic 35.0%
ATGTAAGAGAGTAGAACCTA+AGG - chr1_4:48401889-48401908 None:intergenic 35.0%
AAAGCTCAAGCTCAAATACT+CGG - chr1_4:48401925-48401944 None:intergenic 35.0%
!! CTTTGATGTTGAGTTGAACT+AGG + chr1_4:48401975-48401994 Msa0166800:intron 35.0%
!! AGTTGAACTAGGGCTTTATT+TGG + chr1_4:48401986-48402005 Msa0166800:intron 35.0%
!! GTTGAACTAGGGCTTTATTT+GGG + chr1_4:48401987-48402006 Msa0166800:intron 35.0%
AGTATATACCTCACTCTACT+GGG - chr1_4:48402024-48402043 None:intergenic 35.0%
TGTTGGACTATACACTACTT+TGG + chr1_4:48402109-48402128 Msa0166800:intron 35.0%
ATGGAGATAAGAAGGAAATG+CGG - chr1_4:48402149-48402168 None:intergenic 35.0%
! TCCATTTCTTGTTTCTTTCC+CGG + chr1_4:48402164-48402183 Msa0166800:intron 35.0%
!! CATTTGTTTGCCTTTTGGAA+TGG - chr1_4:48402193-48402212 None:intergenic 35.0%
! CACATCATTTGTTTGCCTTT+TGG - chr1_4:48402198-48402217 None:intergenic 35.0%
ACCTTATTCAACCATCTTTG+AGG + chr1_4:48402250-48402269 Msa0166800:intron 35.0%
ACCTCAAAGATGGTTGAATA+AGG - chr1_4:48402254-48402273 None:intergenic 35.0%
GGTAGATGATGAATAAAACC+AGG + chr1_4:48402501-48402520 Msa0166800:intron 35.0%
!! AGAAATGCCAAACTTGCTAT+CGG - chr1_4:48402656-48402675 None:intergenic 35.0%
TGCATGTTTCCATCATTATG+TGG + chr1_4:48402719-48402738 Msa0166800:intron 35.0%
TGTTTCCATCATTATGTGGA+CGG + chr1_4:48402723-48402742 Msa0166800:intron 35.0%
GAATACACGAAGAAACAGAA+CGG - chr1_4:48403023-48403042 None:intergenic 35.0%
GTCACAACAGAAATGTATTC+GGG - chr1_4:48403073-48403092 None:intergenic 35.0%
GTTCTGCAACATTATAGAGA+CGG + chr1_4:48403324-48403343 Msa0166800:three_prime_UTR 35.0%
GGATAAGATCAAAAGAAGGG+TGG - chr1_4:48392419-48392438 None:intergenic 40.0%
!! GCAATGATTTGATGATGACG+TGG - chr1_4:48392440-48392459 None:intergenic 40.0%
TCATCAAATCATTGCCAACC+TGG + chr1_4:48392445-48392464 Msa0166800:five_prime_UTR 40.0%
GAAGATAATGCGGAAGTTAG+AGG - chr1_4:48392560-48392579 None:intergenic 40.0%
GAGCTTAGGAGAAGATAATG+CGG - chr1_4:48392570-48392589 None:intergenic 40.0%
AGAAAGCGATGCAACTATTC+TGG + chr1_4:48392907-48392926 Msa0166800:five_prime_UTR 40.0%
!!! CGATGCAACTATTCTGGTTT+TGG + chr1_4:48392913-48392932 Msa0166800:five_prime_UTR 40.0%
GTTATGCACAGGAAGAAGAT+TGG - chr1_4:48392990-48393009 None:intergenic 40.0%
ACAACCCAACTAAACATCCA+TGG - chr1_4:48393917-48393936 None:intergenic 40.0%
TCTTGCAGTTGTATTTGGGT+TGG + chr1_4:48394021-48394040 Msa0166800:intron 40.0%
! CTTGCAGTTGTATTTGGGTT+GGG + chr1_4:48394022-48394041 Msa0166800:intron 40.0%
!! TTGCAGTTGTATTTGGGTTG+GGG + chr1_4:48394023-48394042 Msa0166800:intron 40.0%
!!! TTGCTGTTTTGCTTTGGATG+AGG + chr1_4:48394065-48394084 Msa0166800:five_prime_UTR 40.0%
!! TGTTTTGCTTTGGATGAGGA+CGG + chr1_4:48394069-48394088 Msa0166800:five_prime_UTR 40.0%
GGTTATAATTATCGCGAGCT+TGG + chr1_4:48394091-48394110 Msa0166800:five_prime_UTR 40.0%
! CTTGGGCATTTTGAATGACA+AGG + chr1_4:48394109-48394128 Msa0166800:exon 40.0%
! TGGGCATTTTGAATGACAAG+GGG + chr1_4:48394111-48394130 Msa0166800:exon 40.0%
CTCAAGGGGCAATTATTTGT+TGG + chr1_4:48394328-48394347 Msa0166800:CDS 40.0%
ACAACTGTCAGTAACAGGAT+TGG + chr1_4:48395062-48395081 Msa0166800:intron 40.0%
TCATGCTGTAAGCCCTTTAA+GGG - chr1_4:48395108-48395127 None:intergenic 40.0%
AGTGTTGTATTTGGACCTTC+GGG - chr1_4:48395133-48395152 None:intergenic 40.0%
GGGGGATATTATGAGTATAG+GGG - chr1_4:48395167-48395186 None:intergenic 40.0%
GGGGGGATATTATGAGTATA+GGG - chr1_4:48395168-48395187 None:intergenic 40.0%
AGGGGGGATATTATGAGTAT+AGG - chr1_4:48395169-48395188 None:intergenic 40.0%
GCAAAAGTGACTCTCAATCA+AGG - chr1_4:48395365-48395384 None:intergenic 40.0%
CTAATTCGGTTCCAATTGCA+TGG - chr1_4:48395532-48395551 None:intergenic 40.0%
CATGCAATTGGAACCGAATT+AGG + chr1_4:48395530-48395549 Msa0166800:intron 40.0%
! GGAACCGAATTAGGATGTTT+TGG + chr1_4:48395539-48395558 Msa0166800:intron 40.0%
TCAAACATGGCTTCACCAAA+GGG - chr1_4:48395591-48395610 None:intergenic 40.0%
TTTGGTGAAGCCATGTTTGA+GGG + chr1_4:48395591-48395610 Msa0166800:intron 40.0%
TACAAATGCATGGACTCTAG+TGG - chr1_4:48395729-48395748 None:intergenic 40.0%
CCACGAAGTATACAAATGCA+TGG - chr1_4:48395739-48395758 None:intergenic 40.0%
CCATGCATTTGTATACTTCG+TGG + chr1_4:48395736-48395755 Msa0166800:intron 40.0%
TCAAAGGAATGCATCTTCCT+GGG - chr1_4:48395774-48395793 None:intergenic 40.0%
AGAGTTGCCATTAACTGTGA+TGG + chr1_4:48395867-48395886 Msa0166800:intron 40.0%
GAGTTGCCATTAACTGTGAT+GGG + chr1_4:48395868-48395887 Msa0166800:intron 40.0%
! CCAATTAACCCTACCGATTA+TGG - chr1_4:48395933-48395952 None:intergenic 40.0%
CCATAATCGGTAGGGTTAAT+TGG + chr1_4:48395930-48395949 Msa0166800:intron 40.0%
!! TTAATTGGCTTGAGCAAGCA+AGG + chr1_4:48395945-48395964 Msa0166800:intron 40.0%
!! CAACTGAACCGTTTTGATGA+TGG + chr1_4:48396004-48396023 Msa0166800:intron 40.0%
CCTCATACCCATCATCAAAA+CGG - chr1_4:48396015-48396034 None:intergenic 40.0%
! AAGAGCTACTTTGACCTAGA+AGG - chr1_4:48396076-48396095 None:intergenic 40.0%
!!! GTGAGTTGGTATTTTGCTTG+TGG + chr1_4:48396144-48396163 Msa0166800:intron 40.0%
!! GCTTGTTGGTCTTTGTTTAG+TGG + chr1_4:48396252-48396271 Msa0166800:intron 40.0%
! CTGGAATGTTTTTCCGTGTT+GGG - chr1_4:48396565-48396584 None:intergenic 40.0%
! ACTGGAATGTTTTTCCGTGT+TGG - chr1_4:48396566-48396585 None:intergenic 40.0%
TCTATGGCTTCTAATGGGAT+TGG + chr1_4:48396669-48396688 Msa0166800:intron 40.0%
GATGTCATCTCATGACTCTA+TGG + chr1_4:48396700-48396719 Msa0166800:CDS 40.0%
CTTTCTTTCCTTCAGTCTAG+TGG + chr1_4:48397126-48397145 Msa0166800:intron 40.0%
!! AATGGTGATGGTAGTGACAA+TGG + chr1_4:48397267-48397286 Msa0166800:CDS 40.0%
CAAACTCTAGATACCACTTC+AGG - chr1_4:48397490-48397509 None:intergenic 40.0%
! CTGAAGTGGTATCTAGAGTT+TGG + chr1_4:48397488-48397507 Msa0166800:intron 40.0%
! GAACCAAGTTTTTCCAGGTT+AGG - chr1_4:48397525-48397544 None:intergenic 40.0%
! CAGTAGAACCAAGTTTTTCC+AGG - chr1_4:48397530-48397549 None:intergenic 40.0%
!!! ATGCCAAAGGTTTTTGAGAC+TGG - chr1_4:48397742-48397761 None:intergenic 40.0%
! GAAGATTTGGAGTGATGACT+GGG - chr1_4:48397816-48397835 None:intergenic 40.0%
! TGAAGATTTGGAGTGATGAC+TGG - chr1_4:48397817-48397836 None:intergenic 40.0%
!! ATGATGGAGCCAAAGTATTG+TGG + chr1_4:48397967-48397986 Msa0166800:intron 40.0%
CTTCAACCACCACAATACTT+TGG - chr1_4:48397979-48397998 None:intergenic 40.0%
AAAACTGCCGCATTCCAAAA+CGG + chr1_4:48398538-48398557 Msa0166800:intron 40.0%
!!! ACAAAAGCCGTTTTGGAATG+CGG - chr1_4:48398548-48398567 None:intergenic 40.0%
ATCTGCCTGACTAACAAGAA+AGG + chr1_4:48398646-48398665 Msa0166800:intron 40.0%
AACTGCCTTTCTTGTTAGTC+AGG - chr1_4:48398654-48398673 None:intergenic 40.0%
GAAGTTGACAGTCCTAAATC+AGG + chr1_4:48398922-48398941 Msa0166800:CDS 40.0%
TTCCCTGCATATTTCAGCAT+TGG - chr1_4:48399007-48399026 None:intergenic 40.0%
!! TCTAGACACTCCTTTAAGAC+TGG - chr1_4:48399042-48399061 None:intergenic 40.0%
TCCTCTAATGCATTACTTGC+CGG - chr1_4:48399387-48399406 None:intergenic 40.0%
GATAGGATAGAATACTGGGT+TGG + chr1_4:48399549-48399568 Msa0166800:intron 40.0%
CATTGCTTTCTCTAACGAAC+TGG - chr1_4:48399678-48399697 None:intergenic 40.0%
TCCTATTTCCTCCATCACTT+GGG - chr1_4:48399719-48399738 None:intergenic 40.0%
TTCCTATTTCCTCCATCACT+TGG - chr1_4:48399720-48399739 None:intergenic 40.0%
ATGTGCATACACAAGCACAT+AGG - chr1_4:48399862-48399881 None:intergenic 40.0%
GTCAACTTTCAACTCTTACG+TGG - chr1_4:48399945-48399964 None:intergenic 40.0%
ACATGTCAACAGACTTGATG+TGG + chr1_4:48400032-48400051 Msa0166800:CDS 40.0%
CATGTCAACAGACTTGATGT+GGG + chr1_4:48400033-48400052 Msa0166800:CDS 40.0%
CTTTGCATTTGAGAGTCAGA+AGG - chr1_4:48400171-48400190 None:intergenic 40.0%
TCTGACTCTCAAATGCAAAG+CGG + chr1_4:48400171-48400190 Msa0166800:CDS 40.0%
CTCTTGAGCTCAGTTTAAAG+AGG + chr1_4:48400274-48400293 Msa0166800:CDS 40.0%
! CCAGCTTCTTCAACTTTTCT+AGG - chr1_4:48400300-48400319 None:intergenic 40.0%
CCTAGAAAAGTTGAAGAAGC+TGG + chr1_4:48400297-48400316 Msa0166800:CDS 40.0%
! AGACTTCTTAGCATTGAAGG+TGG - chr1_4:48400483-48400502 None:intergenic 40.0%
! TCATTTGAGTTCTGGTTAGG+AGG - chr1_4:48400605-48400624 None:intergenic 40.0%
! GCATCATTTGAGTTCTGGTT+AGG - chr1_4:48400608-48400627 None:intergenic 40.0%
! TGCTAGCATCATTTGAGTTC+TGG - chr1_4:48400613-48400632 None:intergenic 40.0%
!!! TGAGGTTGTTTTTTATGGGC+TGG - chr1_4:48400745-48400764 None:intergenic 40.0%
!! ATGTGAGACAACTTGTTGAG+AGG - chr1_4:48400774-48400793 None:intergenic 40.0%
AGATACGACAACAACAATCC+TGG + chr1_4:48400802-48400821 Msa0166800:CDS 40.0%
GCACCACCTAAAATTGACAA+GGG + chr1_4:48400824-48400843 Msa0166800:CDS 40.0%
! GAACCCTTGTCAATTTTAGG+TGG - chr1_4:48400830-48400849 None:intergenic 40.0%
! GCAGAACCCTTGTCAATTTT+AGG - chr1_4:48400833-48400852 None:intergenic 40.0%
AGTGCCAGTTGAAGGTAATA+CGG + chr1_4:48400994-48401013 Msa0166800:CDS 40.0%
TTTCCCGTATTACCTTCAAC+TGG - chr1_4:48401001-48401020 None:intergenic 40.0%
!!! TTGGGGTTTTTTTTTGGGGA+GGG - chr1_4:48401451-48401470 None:intergenic 40.0%
ATTAGAATCCTGCTATGCAC+AGG + chr1_4:48401660-48401679 Msa0166800:intron 40.0%
TTAGAATCCTGCTATGCACA+GGG + chr1_4:48401661-48401680 Msa0166800:intron 40.0%
GTGGGGAATACAAAAGAGTA+GGG - chr1_4:48401731-48401750 None:intergenic 40.0%
GGTGGGATAAATACATATGG+TGG - chr1_4:48401750-48401769 None:intergenic 40.0%
TTCCCTGATTGTATCATAGG+AGG + chr1_4:48401855-48401874 Msa0166800:intron 40.0%
CAACCTCCTATGATACAATC+AGG - chr1_4:48401861-48401880 None:intergenic 40.0%
CTGATTGTATCATAGGAGGT+TGG + chr1_4:48401859-48401878 Msa0166800:intron 40.0%
AAGCTCAAGCTCAAATACTC+GGG - chr1_4:48401924-48401943 None:intergenic 40.0%
!! GCTTGAGCTTTTAGAAGAGT+TGG + chr1_4:48401934-48401953 Msa0166800:intron 40.0%
CAGTATATACCTCACTCTAC+TGG - chr1_4:48402025-48402044 None:intergenic 40.0%
TGGAGATAAGAAGGAAATGC+GGG - chr1_4:48402148-48402167 None:intergenic 40.0%
TCCGGGAAAGAAACAAGAAA+TGG - chr1_4:48402168-48402187 None:intergenic 40.0%
!!! TTGCCTTTTGGAATGGAATC+CGG - chr1_4:48402186-48402205 None:intergenic 40.0%
GAGATTATCACTAACTGCAG+TGG + chr1_4:48402289-48402308 Msa0166800:intron 40.0%
TGTGGCAGGAATCCTTATAA+TGG - chr1_4:48402347-48402366 None:intergenic 40.0%
GATGAATAAAACCAGGACTG+AGG + chr1_4:48402508-48402527 Msa0166800:intron 40.0%
!! TTTTGGGTCACCAAAAGTTG+AGG + chr1_4:48402600-48402619 Msa0166800:CDS 40.0%
! GATAGGTGAACCTCAACTTT+TGG - chr1_4:48402613-48402632 None:intergenic 40.0%
CAGACTACTGCTCTACAAAT+TGG + chr1_4:48402748-48402767 Msa0166800:intron 40.0%
! TCACAGAGCATTTGACACAA+TGG + chr1_4:48402941-48402960 Msa0166800:three_prime_UTR 40.0%
CATTTGACACAATGGCGTTT+GGG + chr1_4:48402949-48402968 Msa0166800:three_prime_UTR 40.0%
TGTGTAGTTCATCAACCAAC+TGG + chr1_4:48403202-48403221 Msa0166800:intron 40.0%
GCACACAAAAAGTAACCAGT+TGG - chr1_4:48403220-48403239 None:intergenic 40.0%
!!! ACTGGTTACTTTTTGTGTGC+AGG + chr1_4:48403220-48403239 Msa0166800:intron 40.0%
!!! CTGGTTACTTTTTGTGTGCA+GGG + chr1_4:48403221-48403240 Msa0166800:intron 40.0%
!! CTTGAACAGCGCTTGTTTTT+AGG - chr1_4:48403271-48403290 None:intergenic 40.0%
AATGTTGCAGAACCTGAACT+GGG - chr1_4:48403317-48403336 None:intergenic 40.0%
TAATGTTGCAGAACCTGAAC+TGG - chr1_4:48403318-48403337 None:intergenic 40.0%
CAACATTATAGAGACGGCTT+AGG + chr1_4:48403330-48403349 Msa0166800:three_prime_UTR 40.0%
! AGGATCACATTTTCCTAACC+TGG + chr1_4:48403350-48403369 Msa0166800:three_prime_UTR 40.0%
! GGATCACATTTTCCTAACCT+GGG + chr1_4:48403351-48403370 Msa0166800:three_prime_UTR 40.0%
TTCATTGCAATGTCCACCTG+TGG + chr1_4:48392393-48392412 Msa0166800:five_prime_UTR 45.0%
GGAGAGAGATATTTCCAGGT+TGG - chr1_4:48392462-48392481 None:intergenic 45.0%
ACGTGGAGAGAGATATTTCC+AGG - chr1_4:48392466-48392485 None:intergenic 45.0%
TGGAAATATCTCTCTCCACG+TGG + chr1_4:48392465-48392484 Msa0166800:five_prime_UTR 45.0%
AATGTTCCAAATGTGCCACG+TGG - chr1_4:48392483-48392502 None:intergenic 45.0%
!! AGATTGAGTTGGTGAGGGAT+TGG - chr1_4:48392531-48392550 None:intergenic 45.0%
!! GAGAGAGATTGAGTTGGTGA+GGG - chr1_4:48392536-48392555 None:intergenic 45.0%
!! AGAGAGAGATTGAGTTGGTG+AGG - chr1_4:48392537-48392556 None:intergenic 45.0%
AGAGGAGAGAGAGATTGAGT+TGG - chr1_4:48392542-48392561 None:intergenic 45.0%
TGAGCAGAAAGAGCTCTGTT+TGG + chr1_4:48393137-48393156 Msa0166800:intron 45.0%
AGAAAGAGCTCTGTTTGGCA+AGG + chr1_4:48393142-48393161 Msa0166800:intron 45.0%
AGACTTGGGGCTGTTTAGAT+TGG + chr1_4:48393217-48393236 Msa0166800:intron 45.0%
!!! AATTTTGGTTGAGGCTGCCA+TGG + chr1_4:48393897-48393916 Msa0166800:intron 45.0%
GCTGCCATGGATGTTTAGTT+GGG + chr1_4:48393910-48393929 Msa0166800:intron 45.0%
!! GTTTTGCTTTGGATGAGGAC+GGG + chr1_4:48394070-48394089 Msa0166800:five_prime_UTR 45.0%
GGTATCCAGATGAGTGTCAA+TGG + chr1_4:48394132-48394151 Msa0166800:CDS 45.0%
AGTCACCATTGACACTCATC+TGG - chr1_4:48394140-48394159 None:intergenic 45.0%
AAGAACTTGGTCAGCGTTTG+CGG + chr1_4:48394163-48394182 Msa0166800:CDS 45.0%
AAATGAAGGAGTAGCTGGAG+AGG + chr1_4:48394203-48394222 Msa0166800:CDS 45.0%
TGGAGTGACTGATGGAGTTA+AGG + chr1_4:48394245-48394264 Msa0166800:CDS 45.0%
GTGACTGATGGAGTTAAGGT+TGG + chr1_4:48394249-48394268 Msa0166800:CDS 45.0%
!! TGATGGAGTTAAGGTTGGTG+AGG + chr1_4:48394254-48394273 Msa0166800:CDS 45.0%
!! GATGGAGTTAAGGTTGGTGA+GGG + chr1_4:48394255-48394274 Msa0166800:CDS 45.0%
! TACTTGCTGCTGAACAGAAG+AGG - chr1_4:48394295-48394314 None:intergenic 45.0%
! GGGCAATTATTTGTTGGGAG+AGG + chr1_4:48394334-48394353 Msa0166800:CDS 45.0%
ATCCCTTAAGGTCTTGCTTG+TGG + chr1_4:48394371-48394390 Msa0166800:CDS 45.0%
CTCCACAAGCAAGACCTTAA+GGG - chr1_4:48394376-48394395 None:intergenic 45.0%
ACTCCACAAGCAAGACCTTA+AGG - chr1_4:48394377-48394396 None:intergenic 45.0%
GAAGCAACGCAGTGACAATA+TGG - chr1_4:48394416-48394435 None:intergenic 45.0%
AGAAGTAGAGCCACCCTTAA+AGG + chr1_4:48395092-48395111 Msa0166800:intron 45.0%
GAAGTAGAGCCACCCTTAAA+GGG + chr1_4:48395093-48395112 Msa0166800:intron 45.0%
CTCATGCTGTAAGCCCTTTA+AGG - chr1_4:48395109-48395128 None:intergenic 45.0%
CTTAAAGGGCTTACAGCATG+AGG + chr1_4:48395107-48395126 Msa0166800:intron 45.0%
ATAATATCCCCCCTTTGAGC+TGG + chr1_4:48395175-48395194 Msa0166800:intron 45.0%
TGTTAGCAACATTCGTGCTC+AGG - chr1_4:48395305-48395324 None:intergenic 45.0%
GAGCACGAATGTTGCTAACA+AGG + chr1_4:48395305-48395324 Msa0166800:intron 45.0%
TTTACTGCAATGGAGATCCC+AGG + chr1_4:48395447-48395466 Msa0166800:intron 45.0%
!! GGAGATCCCAGGTTTTGTAA+TGG + chr1_4:48395458-48395477 Msa0166800:intron 45.0%
AGTGGGATCATCCATGCAAT+TGG + chr1_4:48395518-48395537 Msa0166800:intron 45.0%
CTCAAACATGGCTTCACCAA+AGG - chr1_4:48395592-48395611 None:intergenic 45.0%
CTTTGGTGAAGCCATGTTTG+AGG + chr1_4:48395590-48395609 Msa0166800:intron 45.0%
ATGAACCAATCCCTAGTCAC+TGG - chr1_4:48395653-48395672 None:intergenic 45.0%
!! AGTGACTAGGGATTGGTTCA+TGG + chr1_4:48395652-48395671 Msa0166800:intron 45.0%
CTCAAAGGAATGCATCTTCC+TGG - chr1_4:48395775-48395794 None:intergenic 45.0%
GGAAGATGCATTCCTTTGAG+TGG + chr1_4:48395775-48395794 Msa0166800:intron 45.0%
CCTACTATTCCACCATCATC+TGG - chr1_4:48395839-48395858 None:intergenic 45.0%
!! CCAGATGATGGTGGAATAGT+AGG + chr1_4:48395836-48395855 Msa0166800:intron 45.0%
! TTGCCATTAACTGTGATGGG+TGG + chr1_4:48395871-48395890 Msa0166800:intron 45.0%
CAACCACCCATCACAGTTAA+TGG - chr1_4:48395877-48395896 None:intergenic 45.0%
ATGGGTGGTTGCAAGAAGTT+AGG + chr1_4:48395886-48395905 Msa0166800:intron 45.0%
GAAGTTAGGTGGCCATAAGA+AGG + chr1_4:48395900-48395919 Msa0166800:intron 45.0%
TATGGGACCATGCCTTCTTA+TGG - chr1_4:48395915-48395934 None:intergenic 45.0%
! AGAAGGCATGGTCCCATAAT+CGG + chr1_4:48395917-48395936 Msa0166800:intron 45.0%
!!! CCGTTTTGATGATGGGTATG+AGG + chr1_4:48396012-48396031 Msa0166800:intron 45.0%
GCGTGCCCAATTAAACATCA+TGG - chr1_4:48396048-48396067 None:intergenic 45.0%
!! AAAATAGGCAGGTTGATGGG+AGG - chr1_4:48396344-48396363 None:intergenic 45.0%
!! CAGCAAATGGATTGCAAGCT+TGG + chr1_4:48396438-48396457 Msa0166800:CDS 45.0%
! GCAAGCTTGGAAGATTTTGG+AGG + chr1_4:48396451-48396470 Msa0166800:CDS 45.0%
AGTGCAATGCCTGATAAACC+AGG - chr1_4:48396521-48396540 None:intergenic 45.0%
! GAATGTTTTTCCGTGTTGGG+TGG - chr1_4:48396562-48396581 None:intergenic 45.0%
AAAACCTGTGGCAGCATGTT+TGG + chr1_4:48396795-48396814 Msa0166800:CDS 45.0%
GGAAGTTTAGGCCTGAACAA+TGG + chr1_4:48397249-48397268 Msa0166800:CDS 45.0%
TTAGGCCTGAACAATGGTGA+TGG + chr1_4:48397255-48397274 Msa0166800:CDS 45.0%
CACTACCATCACCATTGTTC+AGG - chr1_4:48397263-48397282 None:intergenic 45.0%
! GATGGTAGTGACAATGGTAG+TGG + chr1_4:48397273-48397292 Msa0166800:CDS 45.0%
! TGTTTTCCTCTTCCCTGAAG+TGG + chr1_4:48397474-48397493 Msa0166800:intron 45.0%
TAGATACCACTTCAGGGAAG+AGG - chr1_4:48397483-48397502 None:intergenic 45.0%
TAAGAACACGCAGAGGAGTT+TGG - chr1_4:48397622-48397641 None:intergenic 45.0%
CTTCAGCATAGCTCAACCTT+GGG + chr1_4:48397706-48397725 Msa0166800:intron 45.0%
TTTGGCATGTCCTCATTCGT+GGG + chr1_4:48397754-48397773 Msa0166800:intron 45.0%
TGGGTGATAATTGTACGTCG+AGG - chr1_4:48397797-48397816 None:intergenic 45.0%
ATCCCCCTCACTTTGTATGA+TGG + chr1_4:48397951-48397970 Msa0166800:intron 45.0%
CTCCATCATACAAAGTGAGG+GGG - chr1_4:48397956-48397975 None:intergenic 45.0%
GCTCCATCATACAAAGTGAG+GGG - chr1_4:48397957-48397976 None:intergenic 45.0%
GGCTCCATCATACAAAGTGA+GGG - chr1_4:48397958-48397977 None:intergenic 45.0%
TGGCTCCATCATACAAAGTG+AGG - chr1_4:48397959-48397978 None:intergenic 45.0%
!! ATGGAGCCAAAGTATTGTGG+TGG + chr1_4:48397970-48397989 Msa0166800:intron 45.0%
ATACGAGTGGTGTAACATGC+TGG + chr1_4:48398261-48398280 Msa0166800:intron 45.0%
CAACTTAAGAGCCTAAGCCT+AGG + chr1_4:48398493-48398512 Msa0166800:intron 45.0%
TTAAGAGCCTAAGCCTAGGA+AGG + chr1_4:48398497-48398516 Msa0166800:intron 45.0%
TACAGAACTTCCACCTTCCT+AGG - chr1_4:48398513-48398532 None:intergenic 45.0%
! GCATTCCAAAACGGCTTTTG+TGG + chr1_4:48398547-48398566 Msa0166800:intron 45.0%
GTGTAGAAGAATGCCGTGTT+GGG + chr1_4:48398582-48398601 Msa0166800:intron 45.0%
GTCAACTTCTACAGCTCGTT+TGG - chr1_4:48398911-48398930 None:intergenic 45.0%
TCCTAAATCAGGCTCTCAGT+GGG + chr1_4:48398933-48398952 Msa0166800:CDS 45.0%
! AACTTGAGCACAAGTGCTGT+CGG - chr1_4:48398977-48398996 None:intergenic 45.0%
GATGGTTCCTCCAGTCTTAA+AGG + chr1_4:48399029-48399048 Msa0166800:CDS 45.0%
!! AGACACTCCTTTAAGACTGG+AGG - chr1_4:48399039-48399058 None:intergenic 45.0%
GAAAGAGTTTATGCAGCGAC+AGG - chr1_4:48399109-48399128 None:intergenic 45.0%
ACCGGCAAGTAATGCATTAG+AGG + chr1_4:48399383-48399402 Msa0166800:intron 45.0%
TTGGGCCTTAGCCCAAATAT+TGG + chr1_4:48399568-48399587 Msa0166800:intron 45.0%
TGGGCCTTAGCCCAAATATT+GGG + chr1_4:48399569-48399588 Msa0166800:intron 45.0%
TCTGCCCAATATTTGGGCTA+AGG - chr1_4:48399576-48399595 None:intergenic 45.0%
TTGGGCCTTAGCCCAAATAT+TGG + chr1_4:48399568-48399587 Msa0166800:intron 45.0%
TGGGCCTTAGCCCAAATATT+GGG + chr1_4:48399569-48399588 Msa0166800:intron 45.0%
TCTGCCCAATATTTGGGCTA+AGG - chr1_4:48399576-48399595 None:intergenic 45.0%
GTCCTGCAATTCAGGATGAA+CGG + chr1_4:48400319-48400338 Msa0166800:CDS 45.0%
TTCCGTTCATCCTGAATTGC+AGG - chr1_4:48400324-48400343 None:intergenic 45.0%
CTGATCAGTCTGCTTTCTCA+AGG + chr1_4:48400358-48400377 Msa0166800:CDS 45.0%
CAGTCTGCTTTCTCAAGGTA+TGG + chr1_4:48400363-48400382 Msa0166800:intron 45.0%
! GGGAGACTTCTTAGCATTGA+AGG - chr1_4:48400486-48400505 None:intergenic 45.0%
AATGCTAAGAAGTCTCCCAC+CGG + chr1_4:48400488-48400507 Msa0166800:CDS 45.0%
AGTTATAAGAGAGCCAGCAG+AGG + chr1_4:48400682-48400701 Msa0166800:CDS 45.0%
! CTTGTTGAGAGGTACACATG+AGG - chr1_4:48400763-48400782 None:intergenic 45.0%
!! TGTCAATTTTAGGTGGTGCC+AGG - chr1_4:48400823-48400842 None:intergenic 45.0%
GGCACCACCTAAAATTGACA+AGG + chr1_4:48400823-48400842 Msa0166800:CDS 45.0%
GCATGTTAGCAACATTGCTG+TGG - chr1_4:48400886-48400905 None:intergenic 45.0%
! ACATTTGATGACCCACAGTG+TGG - chr1_4:48400968-48400987 None:intergenic 45.0%
ACACTGTGGGTCATCAAATG+TGG + chr1_4:48400967-48400986 Msa0166800:CDS 45.0%
GTGCCAGTTGAAGGTAATAC+GGG + chr1_4:48400995-48401014 Msa0166800:CDS 45.0%
AGTGCTTCAGGAAGCAACAA+TGG + chr1_4:48401037-48401056 Msa0166800:CDS 45.0%
GGAAGCAACAATGGAAGCAA+TGG + chr1_4:48401046-48401065 Msa0166800:CDS 45.0%
! ACAGCAACAATGGACTTGCT+GGG + chr1_4:48401116-48401135 Msa0166800:CDS 45.0%
!! AATGGACTTGCTGGGAATAG+TGG + chr1_4:48401124-48401143 Msa0166800:CDS 45.0%
! AGTGGTGATGCTAGTGGAAA+TGG + chr1_4:48401148-48401167 Msa0166800:CDS 45.0%
GATGCTAGTGGAAATGGAAG+TGG + chr1_4:48401154-48401173 Msa0166800:CDS 45.0%
!! AGAGAGGTGCTTTCATAAGC+AGG + chr1_4:48401255-48401274 Msa0166800:CDS 45.0%
!!! TGGGGTTTTTTTTTGGGGAG+GGG - chr1_4:48401450-48401469 None:intergenic 45.0%
!!! GTTGGGGTTTTTTTTTGGGG+AGG - chr1_4:48401452-48401471 None:intergenic 45.0%
!!! GGGGTTGGGGTTTTTTTTTG+GGG - chr1_4:48401455-48401474 None:intergenic 45.0%
!!! GGGGGTTGGGGTTTTTTTTT+GGG - chr1_4:48401456-48401475 None:intergenic 45.0%
!!! TGGGGGTTGGGGTTTTTTTT+TGG - chr1_4:48401457-48401476 None:intergenic 45.0%
AGAGTAGGGAAAGAATCGAG+AGG - chr1_4:48401717-48401736 None:intergenic 45.0%
GGTGGGGAATACAAAAGAGT+AGG - chr1_4:48401732-48401751 None:intergenic 45.0%
GTATTTATCCCACCTTCTGG+TGG + chr1_4:48401756-48401775 Msa0166800:intron 45.0%
CAGTATTACCACCAGAAGGT+GGG - chr1_4:48401767-48401786 None:intergenic 45.0%
CTTGCAGTATTACCACCAGA+AGG - chr1_4:48401771-48401790 None:intergenic 45.0%
ATAGGAGGTTGGATCTCCTT+AGG + chr1_4:48401870-48401889 Msa0166800:intron 45.0%
TTCCCGGATTCCATTCCAAA+AGG + chr1_4:48402180-48402199 Msa0166800:intron 45.0%
!!! TGCCTTTTGGAATGGAATCC+GGG - chr1_4:48402185-48402204 None:intergenic 45.0%
GAGGTTCACCTATCCATATG+AGG + chr1_4:48402619-48402638 Msa0166800:intron 45.0%
GGCGGACATTTATCCTCATA+TGG - chr1_4:48402635-48402654 None:intergenic 45.0%
!! AATGCCAAACTTGCTATCGG+CGG - chr1_4:48402653-48402672 None:intergenic 45.0%
! TTCAGGTTCGATATCAGAGC+AGG + chr1_4:48402827-48402846 Msa0166800:intron 45.0%
AACAACGACCACGATATCGA+GGG + chr1_4:48402863-48402882 Msa0166800:CDS 45.0%
ACAAATTGCCCTCGATATCG+TGG - chr1_4:48402874-48402893 None:intergenic 45.0%
CTCACTTGCATTACCATTCG+AGG - chr1_4:48402905-48402924 None:intergenic 45.0%
! CTCGAATGGTAATGCAAGTG+AGG + chr1_4:48402903-48402922 Msa0166800:CDS 45.0%
GCATTTGACACAATGGCGTT+TGG + chr1_4:48402948-48402967 Msa0166800:three_prime_UTR 45.0%
! ACAATGGCGTTTGGGATAAC+CGG + chr1_4:48402957-48402976 Msa0166800:three_prime_UTR 45.0%
TTCCTAACCTGGGATGAGTT+TGG + chr1_4:48403361-48403380 Msa0166800:three_prime_UTR 45.0%
TCCTAACCTGGGATGAGTTT+GGG + chr1_4:48403362-48403381 Msa0166800:three_prime_UTR 45.0%
ATCAAAAGAAGGGTGGCCAC+AGG - chr1_4:48392412-48392431 None:intergenic 50.0%
!! GATTGGTGACGTGGATGAAG+TGG - chr1_4:48392514-48392533 None:intergenic 50.0%
GGCTGCCATGGATGTTTAGT+TGG + chr1_4:48393909-48393928 Msa0166800:intron 50.0%
AGAACTTGGTCAGCGTTTGC+GGG + chr1_4:48394164-48394183 Msa0166800:CDS 50.0%
!! GAGTTAAGGTTGGTGAGGGA+GGG + chr1_4:48394259-48394278 Msa0166800:CDS 50.0%
TACCGCAGCAACAGTCTCAA+GGG + chr1_4:48394313-48394332 Msa0166800:CDS 50.0%
CAACGCAGTGACAATATGGC+GGG - chr1_4:48394412-48394431 None:intergenic 50.0%
GCAACGCAGTGACAATATGG+CGG - chr1_4:48394413-48394432 None:intergenic 50.0%
! TGCTGTAAGCCCTTTAAGGG+TGG - chr1_4:48395105-48395124 None:intergenic 50.0%
ATAGGTGCAGAGATGCCCTT+TGG + chr1_4:48395573-48395592 Msa0166800:intron 50.0%
!!! GAAGTGGTTTTGACCGGAGA+GGG + chr1_4:48395618-48395637 Msa0166800:intron 50.0%
!!! AAGTGGTTTTGACCGGAGAG+GGG + chr1_4:48395619-48395638 Msa0166800:intron 50.0%
GGTCAGCATTCCAGTGACTA+GGG + chr1_4:48395640-48395659 Msa0166800:intron 50.0%
GCATTCCAGTGACTAGGGAT+TGG + chr1_4:48395645-48395664 Msa0166800:intron 50.0%
!! CTAGGGATTGGTTCATGGCA+AGG + chr1_4:48395657-48395676 Msa0166800:intron 50.0%
TGTGCGTGCTTTCCACTCAA+AGG - chr1_4:48395790-48395809 None:intergenic 50.0%
! TGGAAAGCACGCACAACCTA+AGG + chr1_4:48395795-48395814 Msa0166800:intron 50.0%
GGTGGTTGCAAGAAGTTAGG+TGG + chr1_4:48395889-48395908 Msa0166800:intron 50.0%
TAGGTGGCCATAAGAAGGCA+TGG + chr1_4:48395905-48395924 Msa0166800:intron 50.0%
GCATGGTCCCATAATCGGTA+GGG + chr1_4:48395922-48395941 Msa0166800:intron 50.0%
TGGCTTGAGCAAGCAAGGTA+AGG + chr1_4:48395950-48395969 Msa0166800:intron 50.0%
TTGAGCAAGCAAGGTAAGGC+CGG + chr1_4:48395954-48395973 Msa0166800:intron 50.0%
!! GACTGGCGTACTTAGCTTGT+TGG + chr1_4:48396238-48396257 Msa0166800:intron 50.0%
TTAACTGAGGTGGCAATGCC+TGG + chr1_4:48396500-48396519 Msa0166800:CDS 50.0%
GTGGCAATGCCTGGTTTATC+AGG + chr1_4:48396509-48396528 Msa0166800:CDS 50.0%
AGATTATGGGCCACCCAACA+CGG + chr1_4:48396549-48396568 Msa0166800:CDS 50.0%
TTCCTTCAGTCTAGTGGGAG+TGG + chr1_4:48397132-48397151 Msa0166800:intron 50.0%
!! TGACAATGGTAGTGGCACTC+AGG + chr1_4:48397281-48397300 Msa0166800:CDS 50.0%
GGCAAACGACAAACCTAACC+TGG + chr1_4:48397509-48397528 Msa0166800:intron 50.0%
AGGTTGAGCTATGCTGAAGG+AGG - chr1_4:48397705-48397724 None:intergenic 50.0%
CCAAGGTTGAGCTATGCTGA+AGG - chr1_4:48397708-48397727 None:intergenic 50.0%
CCTTCAGCATAGCTCAACCT+TGG + chr1_4:48397705-48397724 Msa0166800:intron 50.0%
CACGAATGAGGACATGCCAA+AGG - chr1_4:48397755-48397774 None:intergenic 50.0%
CTTTGGCATGTCCTCATTCG+TGG + chr1_4:48397753-48397772 Msa0166800:intron 50.0%
TAAGGAACCACCCACGAATG+AGG - chr1_4:48397767-48397786 None:intergenic 50.0%
GTACGTCGAGGAAAAGGCTA+AGG - chr1_4:48397785-48397804 None:intergenic 50.0%
CAAGGCAGGGACTGAAGATT+TGG - chr1_4:48397829-48397848 None:intergenic 50.0%
TTCAGTCCCTGCCTTGAACT+AGG + chr1_4:48397833-48397852 Msa0166800:intron 50.0%
GCAAAGCCTAGTTCAAGGCA+GGG - chr1_4:48397842-48397861 None:intergenic 50.0%
CTGCCTTGAACTAGGCTTTG+CGG + chr1_4:48397841-48397860 Msa0166800:intron 50.0%
ACACCGCAAAGCCTAGTTCA+AGG - chr1_4:48397847-48397866 None:intergenic 50.0%
ACTTCCACCTTCCTAGGCTT+AGG - chr1_4:48398507-48398526 None:intergenic 50.0%
GGTGTAGAAGAATGCCGTGT+TGG + chr1_4:48398581-48398600 Msa0166800:intron 50.0%
GTCAGGCAGATGCATCTACA+CGG - chr1_4:48398637-48398656 None:intergenic 50.0%
! TTCTCCTTTTGCAGAGCTCC+TGG + chr1_4:48398884-48398903 Msa0166800:intron 50.0%
TTCTACAGCTCGTTTGGTCC+AGG - chr1_4:48398905-48398924 None:intergenic 50.0%
GTCCTAAATCAGGCTCTCAG+TGG + chr1_4:48398932-48398951 Msa0166800:CDS 50.0%
TCCCACTGAGAGCCTGATTT+AGG - chr1_4:48398937-48398956 None:intergenic 50.0%
! ACTTGAGCACAAGTGCTGTC+GGG - chr1_4:48398976-48398995 None:intergenic 50.0%
CAGCGACAGGAGGAAAATCA+AGG - chr1_4:48399096-48399115 None:intergenic 50.0%
AGAGTTTATGCAGCGACAGG+AGG - chr1_4:48399106-48399125 None:intergenic 50.0%
TTTCCTCCATCACTTGGGCA+GGG - chr1_4:48399714-48399733 None:intergenic 50.0%
ATTTCCTCCATCACTTGGGC+AGG - chr1_4:48399715-48399734 None:intergenic 50.0%
! GCCCAAGTGATGGAGGAAAT+AGG + chr1_4:48399715-48399734 Msa0166800:intron 50.0%
! CATGCACGTACCTCGTTTTG+TGG + chr1_4:48399893-48399912 Msa0166800:intron 50.0%
GCGGTTCCAGTCAAAATTGC+AGG + chr1_4:48400003-48400022 Msa0166800:intron 50.0%
AGAAGCTGGTCCTGCAATTC+AGG + chr1_4:48400311-48400330 Msa0166800:CDS 50.0%
AGAGTTGCTTCCGACACATC+CGG - chr1_4:48400510-48400529 None:intergenic 50.0%
TTGGTTGTTGATGCCTCTGC+TGG - chr1_4:48400698-48400717 None:intergenic 50.0%
TGACAAGGGTTCTGCTACTC+AGG + chr1_4:48400838-48400857 Msa0166800:CDS 50.0%
CATCATGCTCAGGTAGCAAC+TGG - chr1_4:48400913-48400932 None:intergenic 50.0%
GAAGATTCGGCATCATGCTC+AGG - chr1_4:48400923-48400942 None:intergenic 50.0%
ACTGTTGTTGCTCCACACTG+TGG + chr1_4:48400953-48400972 Msa0166800:CDS 50.0%
CTGTTGTTGCTCCACACTGT+GGG + chr1_4:48400954-48400973 Msa0166800:CDS 50.0%
! GTGGTCAAAGTGCCAGTTGA+AGG + chr1_4:48400986-48401005 Msa0166800:CDS 50.0%
AGCAGCGCTGCAATTAATGC+TGG + chr1_4:48401079-48401098 Msa0166800:CDS 50.0%
AGCGCTGCAATTAATGCTGG+AGG + chr1_4:48401082-48401101 Msa0166800:CDS 50.0%
GCGCTGCAATTAATGCTGGA+GGG + chr1_4:48401083-48401102 Msa0166800:CDS 50.0%
! GACAGCAACAATGGACTTGC+TGG + chr1_4:48401115-48401134 Msa0166800:CDS 50.0%
!!! GGGTTTTTTTTTGGGGAGGG+GGG - chr1_4:48401448-48401467 None:intergenic 50.0%
!!! GGGGTTTTTTTTTGGGGAGG+GGG - chr1_4:48401449-48401468 None:intergenic 50.0%
TTGGGTCCATGATGCTCATG+CGG - chr1_4:48401480-48401499 None:intergenic 50.0%
! TACTGAAGTTGGTCTCTGGG+TGG - chr1_4:48401580-48401599 None:intergenic 50.0%
CTGCTATGCACAGGGAATCA+CGG + chr1_4:48401669-48401688 Msa0166800:intron 50.0%
GCAGTATTACCACCAGAAGG+TGG - chr1_4:48401768-48401787 None:intergenic 50.0%
!! GAAAACTGGCTTGATGGGCA+TGG - chr1_4:48401804-48401823 None:intergenic 50.0%
!! GCCAGGAAAACTGGCTTGAT+GGG - chr1_4:48401809-48401828 None:intergenic 50.0%
!! AGCCAGGAAAACTGGCTTGA+TGG - chr1_4:48401810-48401829 None:intergenic 50.0%
AGGTTCACAGCCAGGAAAAC+TGG - chr1_4:48401818-48401837 None:intergenic 50.0%
GATGATCTCAACCTCAGTCC+TGG - chr1_4:48402522-48402541 None:intergenic 50.0%
ATGTCCGCCGATAGCAAGTT+TGG + chr1_4:48402646-48402665 Msa0166800:intron 50.0%
CTGCACCGTCCACATAATGA+TGG - chr1_4:48402731-48402750 None:intergenic 50.0%
GAACAACGACCACGATATCG+AGG + chr1_4:48402862-48402881 Msa0166800:CDS 50.0%
TTTGTGCGACAGTCCTCGAA+TGG + chr1_4:48402889-48402908 Msa0166800:CDS 50.0%
TTGGGATAACCGGACGGAAA+AGG + chr1_4:48402967-48402986 Msa0166800:three_prime_UTR 50.0%
TGGGATAACCGGACGGAAAA+GGG + chr1_4:48402968-48402987 Msa0166800:three_prime_UTR 50.0%
TGTTCAAGACCTACCCGTTG+CGG + chr1_4:48403283-48403302 Msa0166800:three_prime_UTR 50.0%
TGCAGAACCTGAACTGGGTT+TGG - chr1_4:48403312-48403331 None:intergenic 50.0%
CCTAACCTGGGATGAGTTTG+GGG + chr1_4:48403363-48403382 Msa0166800:three_prime_UTR 50.0%
AAAAGAAGGGTGGCCACAGG+TGG - chr1_4:48392409-48392428 None:intergenic 55.0%
CTCTCTCCACGTGGCACATT+TGG + chr1_4:48392474-48392493 Msa0166800:five_prime_UTR 55.0%
! TGGTGACGTGGATGAAGTGG+AGG - chr1_4:48392511-48392530 None:intergenic 55.0%
!! TTGGTGAGGGATTGGTGACG+TGG - chr1_4:48392523-48392542 None:intergenic 55.0%
CAACAAGGGGCCGTTTGGAT+TGG - chr1_4:48393270-48393289 None:intergenic 55.0%
CAATCCAAACGGCCCCTTGT+TGG + chr1_4:48393268-48393287 Msa0166800:intron 55.0%
GTTACCAACAAGGGGCCGTT+TGG - chr1_4:48393275-48393294 None:intergenic 55.0%
TTGGTCAGCGTTTGCGGGAT+GGG + chr1_4:48394169-48394188 Msa0166800:CDS 55.0%
!! GGAGTTAAGGTTGGTGAGGG+AGG + chr1_4:48394258-48394277 Msa0166800:CDS 55.0%
!! AAGGTTGGTGAGGGAGGGAA+TGG + chr1_4:48394264-48394283 Msa0166800:CDS 55.0%
GTACCGCAGCAACAGTCTCA+AGG + chr1_4:48394312-48394331 Msa0166800:CDS 55.0%
ACCGCAGCAACAGTCTCAAG+GGG + chr1_4:48394314-48394333 Msa0166800:CDS 55.0%
ATATCCCCCCTTTGAGCTGG+AGG + chr1_4:48395178-48395197 Msa0166800:intron 55.0%
CATTCGTGCTCAGGAGCAGT+GGG - chr1_4:48395296-48395315 None:intergenic 55.0%
ACATTCGTGCTCAGGAGCAG+TGG - chr1_4:48395297-48395316 None:intergenic 55.0%
TGAAGCCATGTTTGAGGGCG+AGG + chr1_4:48395596-48395615 Msa0166800:intron 55.0%
CACTTCCTCGCCCTCAAACA+TGG - chr1_4:48395604-48395623 None:intergenic 55.0%
CATGTTTGAGGGCGAGGAAG+TGG + chr1_4:48395602-48395621 Msa0166800:intron 55.0%
!!! GGCGAGGAAGTGGTTTTGAC+CGG + chr1_4:48395612-48395631 Msa0166800:intron 55.0%
!!! GGAAGTGGTTTTGACCGGAG+AGG + chr1_4:48395617-48395636 Msa0166800:intron 55.0%
GGGTCAGCATTCCAGTGACT+AGG + chr1_4:48395639-48395658 Msa0166800:intron 55.0%
CGTGGTTAGGTGAATGACCC+AGG + chr1_4:48395754-48395773 Msa0166800:intron 55.0%
GGCATGGTCCCATAATCGGT+AGG + chr1_4:48395921-48395940 Msa0166800:intron 55.0%
ACCTGTGGCAGCATGTTTGG+AGG + chr1_4:48396798-48396817 Msa0166800:CDS 55.0%
TCCTCCAAACATGCTGCCAC+AGG - chr1_4:48396802-48396821 None:intergenic 55.0%
TGCCACTCCCACTAGACTGA+AGG - chr1_4:48397137-48397156 None:intergenic 55.0%
AGTGGGAGTGGCAGTGAAAG+TGG + chr1_4:48397144-48397163 Msa0166800:CDS 55.0%
GACTGGAAACACAAGGCCCA+AGG - chr1_4:48397725-48397744 None:intergenic 55.0%
CGCAAAGCCTAGTTCAAGGC+AGG - chr1_4:48397843-48397862 None:intergenic 55.0%
AGAGCCTAAGCCTAGGAAGG+TGG + chr1_4:48398500-48398519 Msa0166800:intron 55.0%
TGGTCCAGGAGCTCTGCAAA+AGG - chr1_4:48398891-48398910 None:intergenic 55.0%
TTCCTCCATCACTTGGGCAG+GGG - chr1_4:48399713-48399732 None:intergenic 55.0%
! ATTGCTGGCCTCCAGCTCTT+GGG - chr1_4:48399820-48399839 None:intergenic 55.0%
! AATTGCTGGCCTCCAGCTCT+TGG - chr1_4:48399821-48399840 None:intergenic 55.0%
AAGTCTCCCACCGGATGTGT+CGG + chr1_4:48400497-48400516 Msa0166800:CDS 55.0%
TTGCTTCCGACACATCCGGT+GGG - chr1_4:48400506-48400525 None:intergenic 55.0%
! TGGGCTGGAAAGCAGACGTT+TGG - chr1_4:48400730-48400749 None:intergenic 55.0%
CTTGCTGGGAATAGTGGCAG+TGG + chr1_4:48401130-48401149 Msa0166800:CDS 55.0%
! AGTGGCAGTGGTGATGCTAG+TGG + chr1_4:48401142-48401161 Msa0166800:CDS 55.0%
GGAGGGGGGCTACACATTTA+AGG - chr1_4:48401434-48401453 None:intergenic 55.0%
TCCATGATGCTCATGCGGTG+GGG - chr1_4:48401475-48401494 None:intergenic 55.0%
GTCCATGATGCTCATGCGGT+GGG - chr1_4:48401476-48401495 None:intergenic 55.0%
! TGAAGTTGGTCTCTGGGTGG+AGG - chr1_4:48401577-48401596 None:intergenic 55.0%
CGTGATTCCCTGTGCATAGC+AGG - chr1_4:48401671-48401690 None:intergenic 55.0%
! TGGCTTGATGGGCATGGAGA+GGG - chr1_4:48401798-48401817 None:intergenic 55.0%
! GCCCATCAAGCCAGTTTTCC+TGG + chr1_4:48401805-48401824 Msa0166800:intron 55.0%
CCAAGAGAAGGTTCACAGCC+AGG - chr1_4:48401826-48401845 None:intergenic 55.0%
CCTGGCTGTGAACCTTCTCT+TGG + chr1_4:48401823-48401842 Msa0166800:intron 55.0%
TCGTGAAGCCCAGTAGAGTG+AGG + chr1_4:48402013-48402032 Msa0166800:intron 55.0%
! TGGCGTTTGGGATAACCGGA+CGG + chr1_4:48402961-48402980 Msa0166800:three_prime_UTR 55.0%
! CTTCTGGACCCTTTTCCGTC+CGG - chr1_4:48402979-48402998 None:intergenic 55.0%
! ACTGGGTTTGGTCACCGCAA+CGG - chr1_4:48403300-48403319 None:intergenic 55.0%
CCCCAAACTCATCCCAGGTT+AGG - chr1_4:48403366-48403385 None:intergenic 55.0%
GACAACCCCAAACTCATCCC+AGG - chr1_4:48403371-48403390 None:intergenic 55.0%
CTTGGTCAGCGTTTGCGGGA+TGG + chr1_4:48394168-48394187 Msa0166800:CDS 60.0%
GCCCCTTGAGACTGTTGCTG+CGG - chr1_4:48394318-48394337 None:intergenic 60.0%
GCTTACAGCATGAGGCCCGA+AGG + chr1_4:48395115-48395134 Msa0166800:intron 60.0%
CACTCCTCCAGCTCAAAGGG+GGG - chr1_4:48395185-48395204 None:intergenic 60.0%
CCACTCCTCCAGCTCAAAGG+GGG - chr1_4:48395186-48395205 None:intergenic 60.0%
GCCACTCCTCCAGCTCAAAG+GGG - chr1_4:48395187-48395206 None:intergenic 60.0%
CGCCACTCCTCCAGCTCAAA+GGG - chr1_4:48395188-48395207 None:intergenic 60.0%
CCTTTGAGCTGGAGGAGTGG+CGG + chr1_4:48395186-48395205 Msa0166800:intron 60.0%
CTGGAATGCTGACCCCTCTC+CGG - chr1_4:48395634-48395653 None:intergenic 60.0%
! TGGGCACGCTCTAGCCTTCT+AGG + chr1_4:48396059-48396078 Msa0166800:intron 60.0%
GGCATGTCCTCATTCGTGGG+TGG + chr1_4:48397757-48397776 Msa0166800:intron 60.0%
TGCAACCCCTGCCCAAGTGA+TGG + chr1_4:48399705-48399724 Msa0166800:intron 60.0%
AACCCCTGCCCAAGTGATGG+AGG + chr1_4:48399708-48399727 Msa0166800:intron 60.0%
GTATCCCCTTCCCCAAGAGC+TGG + chr1_4:48399806-48399825 Msa0166800:intron 60.0%
! TTGCTGGCCTCCAGCTCTTG+GGG - chr1_4:48399819-48399838 None:intergenic 60.0%
GTTGCTTCCGACACATCCGG+TGG - chr1_4:48400507-48400526 None:intergenic 60.0%
ATGCTCATGCGGTGGGGGTT+GGG - chr1_4:48401469-48401488 None:intergenic 60.0%
CCATGATGCTCATGCGGTGG+GGG - chr1_4:48401474-48401493 None:intergenic 60.0%
GGTCCATGATGCTCATGCGG+TGG - chr1_4:48401477-48401496 None:intergenic 60.0%
! CTGGCTTGATGGGCATGGAG+AGG - chr1_4:48401799-48401818 None:intergenic 60.0%
GTTTGGTCACCGCAACGGGT+AGG - chr1_4:48403295-48403314 None:intergenic 60.0%
! CTGGGTTTGGTCACCGCAAC+GGG - chr1_4:48403299-48403318 None:intergenic 60.0%
GCGGTGACCAAACCCAGTTC+AGG + chr1_4:48403302-48403321 Msa0166800:three_prime_UTR 60.0%
CCCCCTTTGAGCTGGAGGAG+TGG + chr1_4:48395183-48395202 Msa0166800:intron 65.0%
CCGCCACTCCTCCAGCTCAA+AGG - chr1_4:48395189-48395208 None:intergenic 65.0%
TCCCCTTCCCCAAGAGCTGG+AGG + chr1_4:48399809-48399828 Msa0166800:intron 65.0%
GCCTCCAGCTCTTGGGGAAG+GGG - chr1_4:48399813-48399832 None:intergenic 65.0%
GGCCTCCAGCTCTTGGGGAA+GGG - chr1_4:48399814-48399833 None:intergenic 65.0%
TGGCCTCCAGCTCTTGGGGA+AGG - chr1_4:48399815-48399834 None:intergenic 65.0%
TGCTCATGCGGTGGGGGTTG+GGG - chr1_4:48401468-48401487 None:intergenic 65.0%
GATGCTCATGCGGTGGGGGT+TGG - chr1_4:48401470-48401489 None:intergenic 65.0%
CCCCCACCGCATGAGCATCA+TGG + chr1_4:48401471-48401490 Msa0166800:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 48392371 48403567 48392371 ID=Msa0166800;Name=Msa0166800
chr1_4 mRNA 48392371 48403567 48392371 ID=Msa0166800-mRNA-1;Parent=Msa0166800;Name=Msa0166800-mRNA-1;_AED=0.18;_eAED=0.18;_QI=624|0.81|0.91|0.91|0.72|0.66|12|392|762
chr1_4 exon 48392371 48392763 48392371 ID=Msa0166800-mRNA-1:exon:14082;Parent=Msa0166800-mRNA-1
chr1_4 exon 48392888 48393024 48392888 ID=Msa0166800-mRNA-1:exon:14083;Parent=Msa0166800-mRNA-1
chr1_4 exon 48394029 48394453 48394029 ID=Msa0166800-mRNA-1:exon:14084;Parent=Msa0166800-mRNA-1
chr1_4 exon 48396429 48396590 48396429 ID=Msa0166800-mRNA-1:exon:14085;Parent=Msa0166800-mRNA-1
chr1_4 exon 48396699 48396832 48396699 ID=Msa0166800-mRNA-1:exon:14086;Parent=Msa0166800-mRNA-1
chr1_4 exon 48397141 48397302 48397141 ID=Msa0166800-mRNA-1:exon:14087;Parent=Msa0166800-mRNA-1
chr1_4 exon 48398898 48399078 48398898 ID=Msa0166800-mRNA-1:exon:14088;Parent=Msa0166800-mRNA-1
chr1_4 exon 48400013 48400379 48400013 ID=Msa0166800-mRNA-1:exon:14089;Parent=Msa0166800-mRNA-1
chr1_4 exon 48400472 48401276 48400472 ID=Msa0166800-mRNA-1:exon:14090;Parent=Msa0166800-mRNA-1
chr1_4 exon 48402583 48402621 48402583 ID=Msa0166800-mRNA-1:exon:14091;Parent=Msa0166800-mRNA-1
chr1_4 exon 48402832 48403005 48402832 ID=Msa0166800-mRNA-1:exon:14092;Parent=Msa0166800-mRNA-1
chr1_4 exon 48403242 48403567 48403242 ID=Msa0166800-mRNA-1:exon:14093;Parent=Msa0166800-mRNA-1
chr1_4 five_prime_UTR 48392371 48392763 48392371 ID=Msa0166800-mRNA-1:five_prime_utr;Parent=Msa0166800-mRNA-1
chr1_4 five_prime_UTR 48392888 48393024 48392888 ID=Msa0166800-mRNA-1:five_prime_utr;Parent=Msa0166800-mRNA-1
chr1_4 five_prime_UTR 48394029 48394122 48394029 ID=Msa0166800-mRNA-1:five_prime_utr;Parent=Msa0166800-mRNA-1
chr1_4 CDS 48394123 48394453 48394123 ID=Msa0166800-mRNA-1:cds;Parent=Msa0166800-mRNA-1
chr1_4 CDS 48396429 48396590 48396429 ID=Msa0166800-mRNA-1:cds;Parent=Msa0166800-mRNA-1
chr1_4 CDS 48396699 48396832 48396699 ID=Msa0166800-mRNA-1:cds;Parent=Msa0166800-mRNA-1
chr1_4 CDS 48397141 48397302 48397141 ID=Msa0166800-mRNA-1:cds;Parent=Msa0166800-mRNA-1
chr1_4 CDS 48398898 48399078 48398898 ID=Msa0166800-mRNA-1:cds;Parent=Msa0166800-mRNA-1
chr1_4 CDS 48400013 48400379 48400013 ID=Msa0166800-mRNA-1:cds;Parent=Msa0166800-mRNA-1
chr1_4 CDS 48400472 48401276 48400472 ID=Msa0166800-mRNA-1:cds;Parent=Msa0166800-mRNA-1
chr1_4 CDS 48402583 48402621 48402583 ID=Msa0166800-mRNA-1:cds;Parent=Msa0166800-mRNA-1
chr1_4 CDS 48402832 48402939 48402832 ID=Msa0166800-mRNA-1:cds;Parent=Msa0166800-mRNA-1
chr1_4 three_prime_UTR 48402940 48403005 48402940 ID=Msa0166800-mRNA-1:three_prime_utr;Parent=Msa0166800-mRNA-1
chr1_4 three_prime_UTR 48403242 48403567 48403242 ID=Msa0166800-mRNA-1:three_prime_utr;Parent=Msa0166800-mRNA-1
Gene Sequence

>Msa0166800

ATGACAAGGGGTATCCAGATGAGTGTCAATGGTGACTGTAAAGAACTTGGTCAGCGTTTGCGGGATGGGAAGAACAACTTAAATGAAGGAGTAGCTGGAGAGGATGATGAAGTGAAATGTAATGGAGTGACTGATGGAGTTAAGGTTGGTGAGGGAGGGAATGGCGAATCCTCTTCTGTTCAGCAGCAAGTACCGCAGCAACAGTCTCAAGGGGCAATTATTTGTTGGGAGAGGTTTTTACATATTAGATCCCTTAAGGTCTTGCTTGTGGAGTATGATGACTGTACCCGCCATATTGTCACTGCGTTGCTTCGCAATTGTAGTTATGAAGTTATTGAAGCAGCAAATGGATTGCAAGCTTGGAAGATTTTGGAGGATTTAACCAATCATATTGATCTCATTTTAACTGAGGTGGCAATGCCTGGTTTATCAGGCATTGCACTTCTATACAAGATTATGGGCCACCCAACACGGAAAAACATTCCAGTAATTATGATGTCATCTCATGACTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGTGCTGTCGACTTTCTAGTAAAACCCATACGCAAGAATGAGCTTAAAAACCTGTGGCAGCATGTTTGGAGGAGATGTCATAGTTCTAGTGGGAGTGGCAGTGAAAGTGGAACACAAACCCAGAAATCTATTAAATCAAGGAGTCTTGAAAAGTTTGATAACAATTCGGGAAGCAATGATGAGCAAGATAATGGAAGTTTAGGCCTGAACAATGGTGATGGTAGTGACAATGGTAGTGGCACTCAGAGCTCCTGGACCAAACGAGCTGTAGAAGTTGACAGTCCTAAATCAGGCTCTCAGTGGGATCAGATAGCTGAGTGTCCCGACAGCACTTGTGCTCAAGTTGTTCATTCCAATGCTGAAATATGCAGGGAAAAGATGGTTCCTCCAGTCTTAAAGGAGTGTCTAGAGAAAAAGGAACAAATAGTCAAAATTGCAGGTTCAAAACATGTCAACAGACTTGATGTGGGCCCCTCTAAATTCAATGAGCAAATTAATAGAGGACAGATGGACCCTAATTGTGAGAATCAATCTGGCAAACTAAGATGCAAAGTGCTTTCATTATCTGATGCAGTTACTAGCCCTTCTGACTCTCAAATGCAAAGCGGAGAAATTGAAGCCCTAAATAGAAGACCCAACTTCTCAGATATTGACAACAAAGGTACTAATAATGATGAGGAGTTGCCATCTCTTGAGCTCAGTTTAAAGAGGCCTAGAAAAGTTGAAGAAGCTGGTCCTGCAATTCAGGATGAACGGAACATTTTAAGACGTTCTGATCAGTCTGCTTTCTCAAGGTACAATGCCACCTTCAATGCTAAGAAGTCTCCCACCGGATGTGTCGGAAGCAACTCTCCGCCTAATAACAGCTTAGAAGTTACAAAGAAAGATTCATCTCGCGATATTCAATCTCATTCTAGTGGCAATCCTCCTAACCAGAACTCAAATGATGCTAGCAACAACATTGATATGGGTTCCACTGCTAATAATGCTTTTACCAAATCTGCAGTTATAAGAGAGCCAGCAGAGGCATCAACAACCAAATTTTTGTACCAAACGTCTGCTTTCCAGCCCATAAAAAACAACCTCATGTGTACCTCTCAACAAGTTGTCTCACATACTAATGAAGATACGACAACAACAATCCTGGCACCACCTAAAATTGACAAGGGTTCTGCTACTCAGGATTTGCATCACCATTATGAAAACCACAGCAATGTTGCTAACATGCAGCACCAGTTGCTACCTGAGCATGATGCCGAATCTTCAAAGAAAATGACTGTTGTTGCTCCACACTGTGGGTCATCAAATGTGGTCAAAGTGCCAGTTGAAGGTAATACGGGAAATTACAGTATCAATAGAAGTGCTTCAGGAAGCAACAATGGAAGCAATGGACAAAATGGGAGCAGCGCTGCAATTAATGCTGGAGGGACAAACATAGACAGCAACAATGGACTTGCTGGGAATAGTGGCAGTGGTGATGCTAGTGGAAATGGAAGTGGCAACAGAGTAGATCAAAACAAGAATTCTCAAAGGGAAGCAGCCCTAATTAAATTTCGCCAAAAAAGAAAGGAGAGAAAAGAGAGGTGCTTTCATAAGCAGACTTCATTTAGTTTTGCTTTTGGGTCACCAAAAGTTGAGGTTCGATATCAGAGCAGGCAGAAATTAGCTGAACAACGACCACGATATCGAGGGCAATTTGTGCGACAGTCCTCGAATGGTAATGCAAGTGAGGCAACAGATAGTTGA
Protein sequence

>Msa0166800

MTRGIQMSVNGDCKELGQRLRDGKNNLNEGVAGEDDEVKCNGVTDGVKVGEGGNGESSSVQQQVPQQQSQGAIICWERFLHIRSLKVLLVEYDDCTRHIVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLILTEVAMPGLSGIALLYKIMGHPTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSIKSRSLEKFDNNSGSNDEQDNGSLGLNNGDGSDNGSGTQSSWTKRAVEVDSPKSGSQWDQIAECPDSTCAQVVHSNAEICREKMVPPVLKECLEKKEQIVKIAGSKHVNRLDVGPSKFNEQINRGQMDPNCENQSGKLRCKVLSLSDAVTSPSDSQMQSGEIEALNRRPNFSDIDNKGTNNDEELPSLELSLKRPRKVEEAGPAIQDERNILRRSDQSAFSRYNATFNAKKSPTGCVGSNSPPNNSLEVTKKDSSRDIQSHSSGNPPNQNSNDASNNIDMGSTANNAFTKSAVIREPAEASTTKFLYQTSAFQPIKNNLMCTSQQVVSHTNEDTTTTILAPPKIDKGSATQDLHHHYENHSNVANMQHQLLPEHDAESSKKMTVVAPHCGSSNVVKVPVEGNTGNYSINRSASGSNNGSNGQNGSSAAINAGGTNIDSNNGLAGNSGSGDASGNGSGNRVDQNKNSQREAALIKFRQKRKERKERCFHKQTSFSFAFGSPKVEVRYQSRQKLAEQRPRYRGQFVRQSSNGNASEATDS*