AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0613690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0613690 MtrunA17_Chr4g0049501 98.815 675 8 0 1 675 1 675 0.0 1352
Msa0613690 MtrunA17_Chr2g0279901 90.490 673 62 2 3 675 6 676 0.0 1217
Msa0613690 MtrunA17_Chr2g0277021 54.588 643 287 3 27 666 45 685 0.0 695
Msa0613690 MtrunA17_Chr8g0388761 53.448 580 244 10 53 614 38 609 0.0 581
Msa0613690 MtrunA17_Chr8g0388671 53.448 580 244 10 53 614 38 609 0.0 579
Msa0613690 MtrunA17_Chr4g0031301 49.298 641 283 12 54 659 10 643 0.0 570
Msa0613690 MtrunA17_Chr4g0031321 48.986 641 285 12 54 659 10 643 0.0 568
Msa0613690 MtrunA17_Chr7g0262821 49.373 638 287 11 54 662 10 640 0.0 568
Msa0613690 MtrunA17_Chr7g0223291 49.383 648 291 11 54 673 10 648 0.0 567
Msa0613690 MtrunA17_Chr7g0223181 50.325 616 273 10 54 643 10 618 0.0 567
Msa0613690 MtrunA17_Chr4g0073741 50.081 621 281 10 54 652 9 622 0.0 566
Msa0613690 MtrunA17_Chr2g0284681 45.258 601 294 12 51 630 6 592 4.34e-165 486
Msa0613690 MtrunA17_Chr7g0223721 46.769 588 285 13 46 613 2 581 4.02e-162 479
Msa0613690 MtrunA17_Chr7g0233311 46.299 581 281 12 54 612 10 581 3.23e-161 477
Msa0613690 MtrunA17_Chr7g0223781 44.020 602 305 11 54 629 10 605 1.69e-160 475
Msa0613690 MtrunA17_Chr7g0223711 45.552 562 276 10 54 595 10 561 2.16e-160 475
Msa0613690 MtrunA17_Chr2g0298851 44.828 580 292 12 54 613 10 581 7.03e-159 471
Msa0613690 MtrunA17_Chr7g0221661 45.675 578 290 11 54 613 10 581 2.77e-157 467
Msa0613690 MtrunA17_Chr8g0350731 44.538 595 291 13 17 595 17 588 6.78e-157 468
Msa0613690 MtrunA17_Chr7g0223851 45.189 582 287 14 54 613 19 590 8.20e-157 466
Msa0613690 MtrunA17_Chr7g0223751 45.161 558 283 11 54 595 10 560 5.17e-156 464
Msa0613690 MtrunA17_Chr6g0462601 44.345 557 289 9 54 595 10 560 5.57e-156 464
Msa0613690 MtrunA17_Chr4g0040931 45.876 582 283 14 54 613 10 581 4.57e-155 461
Msa0613690 MtrunA17_Chr7g0223621 43.486 591 309 12 54 626 10 593 4.51e-154 459
Msa0613690 MtrunA17_Chr2g0293581 44.845 582 290 12 54 613 11 583 6.56e-154 459
Msa0613690 MtrunA17_Chr5g0427901 42.810 612 292 14 54 634 10 594 3.01e-153 457
Msa0613690 MtrunA17_Chr7g0223731 44.624 558 286 10 54 595 10 560 9.74e-152 453
Msa0613690 MtrunA17_Chr7g0225671 46.359 563 269 15 52 593 15 565 1.32e-151 453
Msa0613690 MtrunA17_Chr7g0223741 44.821 560 283 10 54 595 10 561 1.55e-150 449
Msa0613690 MtrunA17_Chr7g0223701 44.092 567 285 13 54 595 10 569 3.50e-149 447
Msa0613690 MtrunA17_Chr2g0287631 45.455 583 279 12 54 606 10 583 4.30e-149 446
Msa0613690 MtrunA17_Chr7g0223031 45.161 558 283 11 54 595 10 560 4.31e-149 446
Msa0613690 MtrunA17_Chr7g0223801 43.067 613 320 15 54 647 10 612 8.90e-149 445
Msa0613690 MtrunA17_Chr6g0462681 43.806 557 292 10 54 595 10 560 3.73e-148 446
Msa0613690 MtrunA17_Chr2g0296391 45.180 529 265 9 54 564 10 531 5.06e-148 441
Msa0613690 MtrunA17_Chr2g0298861 44.167 600 295 17 46 613 2 593 8.65e-148 443
Msa0613690 MtrunA17_Chr7g0248131 44.029 561 288 13 54 595 10 563 5.03e-145 436
Msa0613690 MtrunA17_Chr7g0223631 43.063 555 285 12 54 595 10 546 6.66e-144 432
Msa0613690 MtrunA17_Chr7g0233301 44.563 561 249 14 54 593 10 529 1.22e-142 429
Msa0613690 MtrunA17_Chr7g0223821 46.857 525 244 13 40 544 1 510 3.87e-142 431
Msa0613690 MtrunA17_Chr6g0462641 40.925 562 306 9 54 595 10 565 7.84e-142 429
Msa0613690 MtrunA17_Chr6g0462771 41.459 562 303 9 54 595 10 565 1.46e-141 428
Msa0613690 MtrunA17_Chr6g0462711 41.509 583 310 12 54 612 11 586 3.12e-141 428
Msa0613690 MtrunA17_Chr7g0217971 43.604 555 268 13 54 593 10 534 1.02e-139 421
Msa0613690 MtrunA17_Chr7g0248151 43.828 559 290 12 54 595 10 561 1.27e-138 419
Msa0613690 MtrunA17_Chr4g0012541 42.096 582 296 14 54 613 10 572 2.46e-136 413
Msa0613690 MtrunA17_Chr7g0223831 42.246 561 264 17 54 593 10 531 1.53e-129 395
Msa0613690 MtrunA17_Chr2g0293601 43.478 506 232 8 54 544 10 476 2.17e-129 391
Msa0613690 MtrunA17_Chr7g0223541 44.008 509 262 10 105 595 15 518 1.59e-128 392
Msa0613690 MtrunA17_Chr7g0228281 40.760 579 272 14 54 613 71 597 5.87e-128 392
Msa0613690 MtrunA17_Chr7g0215261 41.935 558 264 13 54 593 10 525 2.17e-127 389
Msa0613690 MtrunA17_Chr6g0462611 42.147 503 273 8 106 595 11 508 2.92e-126 387
Msa0613690 MtrunA17_Chr8g0390821 37.666 677 324 22 40 645 1 650 6.26e-124 382
Msa0613690 MtrunA17_Chr7g0223681 43.949 471 244 8 137 593 5 469 8.34e-121 370
Msa0613690 MtrunA17_Chr2g0331381 39.963 543 240 12 53 578 6 479 1.47e-119 365
Msa0613690 MtrunA17_Chr2g0299921 48.346 393 186 6 43 425 1019 1404 1.51e-104 349
Msa0613690 MtrunA17_Chr2g0299921 47.727 396 187 8 54 436 1414 1802 2.30e-95 323
Msa0613690 MtrunA17_Chr2g0293561 44.792 384 191 7 54 423 10 386 1.01e-103 321
Msa0613690 MtrunA17_Chr2g0299791 46.875 384 187 6 54 427 1043 1419 3.77e-102 340
Msa0613690 MtrunA17_Chr6g0462861 36.313 537 307 12 54 577 10 524 1.90e-101 324
Msa0613690 MtrunA17_Chr2g0299851 46.842 380 189 5 54 425 1039 1413 1.43e-100 336
Msa0613690 MtrunA17_Chr2g0299821 45.407 381 187 7 54 420 10 383 5.83e-98 309
Msa0613690 MtrunA17_Chr2g0299821 50.562 89 36 1 493 573 396 484 9.91e-18 86.7
Msa0613690 MtrunA17_Chr2g0299881 43.508 439 210 12 10 427 998 1419 3.20e-95 321
Msa0613690 MtrunA17_Chr1g0151991 50.182 275 125 5 54 317 10 283 5.08e-86 271
Msa0613690 MtrunA17_Chr7g0245521 48.864 264 123 4 54 306 10 272 4.90e-79 253
Msa0613690 MtrunA17_Chr1g0166551 33.737 578 251 19 52 613 4 465 2.63e-76 253
Msa0613690 MtrunA17_Chr2g0293271 35.616 438 198 8 65 491 45 409 1.29e-72 240
Msa0613690 MtrunA17_Chr5g0394391 29.358 545 313 12 29 529 5 521 1.02e-69 237
Msa0613690 MtrunA17_Chr3g0098761 33.990 406 251 6 53 446 3 403 1.29e-67 236
Msa0613690 MtrunA17_Chr4g0004331 32.598 408 258 5 53 448 3 405 4.41e-66 233
Msa0613690 MtrunA17_Chr5g0444001 31.640 433 270 7 53 466 3 428 4.33e-64 221
Msa0613690 MtrunA17_Chr2g0331901 31.683 404 259 6 53 444 3 401 3.54e-63 225
Msa0613690 MtrunA17_Chr7g0245531 44.922 256 135 4 343 593 2 256 8.30e-63 211
Msa0613690 MtrunA17_Chr7g0223671 52.151 186 80 2 119 295 10 195 1.30e-58 196
Msa0613690 MtrunA17_Chr1g0188601 50.532 188 84 2 135 313 1 188 1.69e-55 187
Msa0613690 MtrunA17_Chr6g0462791 51.807 166 76 1 156 317 10 175 2.16e-51 176
Msa0613690 MtrunA17_Chr6g0462751 33.333 357 159 11 107 446 9 303 4.23e-51 180
Msa0613690 MtrunA17_Chr6g0462631 37.500 304 136 6 156 450 39 297 6.80e-51 179
Msa0613690 MtrunA17_Chr4g0060241 29.771 524 316 15 38 531 5 506 2.30e-50 184
Msa0613690 MtrunA17_Chr1g0152001 41.313 259 138 9 364 613 12 265 2.41e-49 175
Msa0613690 MtrunA17_Chr4g0064621 30.361 527 324 12 48 540 135 652 7.54e-49 182
Msa0613690 MtrunA17_Chr7g0223761 34.758 351 166 9 275 613 3 302 2.13e-47 171
Msa0613690 MtrunA17_Chr4g0046881 51.634 153 63 2 156 303 2 148 1.27e-45 159
Msa0613690 MtrunA17_Chr7g0223771 52.667 150 62 2 139 279 4 153 1.19e-43 154
Msa0613690 MtrunA17_Chr1g0188611 43.600 250 124 7 365 602 6 250 8.90e-43 156
Msa0613690 MtrunA17_Chr5g0442171 31.231 333 198 7 209 523 1 320 3.20e-41 152
Msa0613690 MtrunA17_Chr3g0120101 29.017 417 263 11 40 430 15 424 3.87e-38 152
Msa0613690 MtrunA17_Chr7g0223861 51.145 131 55 3 121 242 4 134 1.06e-35 131
Msa0613690 MtrunA17_Chr5g0394221 31.381 239 159 5 339 573 71 308 5.42e-32 127
Msa0613690 MtrunA17_Chr7g0245541 46.099 141 74 2 454 593 4 143 6.75e-31 120
Msa0613690 MtrunA17_Chr6g0462701 40.909 154 62 3 156 304 39 168 2.34e-29 114
Msa0613690 MtrunA17_Chr6g0462691 45.588 136 69 2 364 494 5 140 6.43e-29 112
Msa0613690 MtrunA17_Chr4g0046871 50.515 97 44 2 377 469 9 105 1.58e-22 92.8
Msa0613690 MtrunA17_Chr4g0064651 45.652 92 50 0 432 523 30 121 4.03e-19 84.0
Msa0613690 MtrunA17_Chr5g0394231 29.493 217 95 6 119 326 7 174 1.03e-18 84.7
Msa0613690 MtrunA17_Chr6g0481391 32.520 123 75 2 80 198 13 131 1.15e-17 79.7
Msa0613690 MtrunA17_Chr2g0284661 52.381 84 36 2 404 483 60 143 1.17e-17 80.1
Msa0613690 MtrunA17_Chr6g0481381 52.703 74 30 1 215 283 1 74 2.42e-15 74.7
Msa0613690 MtrunA17_Chr7g0223691 56.061 66 26 2 54 117 10 74 2.31e-14 68.6
Msa0613690 MtrunA17_Chr6g0462621 50.000 64 31 1 54 117 10 72 1.03e-13 66.6
Msa0613690 MtrunA17_Chr1g0188591 50.000 66 30 2 54 117 10 74 3.33e-13 65.9
Msa0613690 MtrunA17_Chr2g0299941 60.000 55 22 0 433 487 23 77 1.58e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0613690 AT5G09590.1 83.505 679 107 2 2 675 4 682 0.0 1142
Msa0613690 AT4G37910.1 82.318 673 115 2 3 672 5 676 0.0 1093
Msa0613690 AT4G37910.2 82.318 673 115 2 3 672 5 676 0.0 1093
Msa0613690 AT4G24280.1 57.711 603 248 4 47 645 74 673 0.0 692
Msa0613690 AT5G49910.1 56.613 620 262 4 47 663 74 689 0.0 691
Msa0613690 AT5G42020.1 54.301 558 232 9 53 595 37 586 0.0 582
Msa0613690 AT5G42020.3 50.949 632 273 13 53 662 42 658 0.0 580
Msa0613690 AT5G28540.1 54.301 558 232 9 53 595 37 586 0.0 578
Msa0613690 AT5G02500.1 50.489 614 275 10 54 643 10 618 0.0 569
Msa0613690 AT3G12580.1 49.525 632 283 12 54 661 10 629 0.0 567
Msa0613690 AT3G09440.1 51.903 578 252 9 54 612 10 580 0.0 562
Msa0613690 AT3G09440.4 51.903 578 252 9 54 612 10 580 0.0 562
Msa0613690 AT3G09440.2 51.903 578 252 9 54 612 10 580 0.0 562
Msa0613690 AT3G09440.3 51.903 578 252 9 54 612 10 580 0.0 562
Msa0613690 AT1G16030.1 48.738 634 289 11 54 663 9 630 0.0 561
Msa0613690 AT1G56410.1 49.431 615 284 10 54 648 10 617 0.0 560
Msa0613690 AT5G02490.1 48.860 614 285 10 54 643 10 618 0.0 560
Msa0613690 AT1G09080.2 52.900 569 245 10 53 607 42 601 0.0 555
Msa0613690 AT1G09080.1 52.900 569 245 10 53 607 52 611 0.0 555
Msa0613690 AT5G42020.2 55.967 486 191 9 53 523 37 514 4.13e-177 518
Msa0613690 AT5G02500.2 50.895 391 177 6 54 434 10 395 3.26e-124 379
Msa0613690 AT1G79930.2 32.274 409 260 5 53 449 3 406 5.44e-67 235
Msa0613690 AT1G79930.1 32.274 409 260 5 53 449 3 406 7.60e-67 235
Msa0613690 AT1G79920.3 32.029 409 261 5 53 449 3 406 9.73e-67 233
Msa0613690 AT1G79920.2 32.029 409 261 5 53 449 3 406 9.73e-67 233
Msa0613690 AT1G79920.4 32.029 409 261 5 53 449 3 406 9.73e-67 233
Msa0613690 AT1G79920.1 32.029 409 261 5 53 449 3 406 1.01e-66 233
Msa0613690 AT2G32120.1 30.502 518 304 12 45 531 21 513 7.86e-66 227
Msa0613690 AT2G32120.2 30.502 518 304 12 45 531 21 513 7.86e-66 227
Msa0613690 AT1G11660.4 31.220 410 264 5 53 449 3 407 5.51e-62 221
Msa0613690 AT1G11660.3 31.220 410 264 5 53 449 3 407 5.51e-62 221
Msa0613690 AT1G11660.1 31.220 410 264 5 53 449 3 407 5.51e-62 221
Msa0613690 AT1G11660.2 31.467 375 239 5 88 449 1 370 1.02e-54 199
Msa0613690 AT4G16660.1 27.571 457 291 11 48 469 21 472 2.02e-42 165
Msa0613690 AT4G16660.2 27.571 457 291 11 48 469 45 496 2.84e-42 165
Msa0613690 AT4G32208.1 69.444 108 32 1 569 675 46 153 9.75e-36 132

Find 194 sgRNAs with CRISPR-Local

Find 296 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATTCATGTGTTTCTTTAA+TGG 0.139612 4_2:+62519458 Msa0613690:CDS
CAACAAGCAGCTCTCCTTTC+TGG 0.152574 4_2:-62519635 None:intergenic
CAAGTTTGGCTCGACCTTTC+AGG 0.154885 4_2:+62519300 Msa0613690:CDS
ACCGTTTGAAATTTCTAAAA+TGG 0.216877 4_2:-62520108 None:intergenic
TGCAATGGGAGCAGCTCTTC+AGG 0.222059 4_2:+62520692 Msa0613690:CDS
GGGTGCCTTGACAATCTTAT+AGG 0.230055 4_2:-62519775 None:intergenic
TTTGGCTGTGAAGTGAAATT+AGG 0.232878 4_2:-62518487 None:intergenic
TCAGAATTCTCAATAACTTT+AGG 0.250981 4_2:-62519576 None:intergenic
ATCTTTCAAGCAGCTCTTAC+AGG 0.256743 4_2:-62520535 None:intergenic
TAAGAACAAAAGCACCAATT+TGG 0.281100 4_2:-62519845 None:intergenic
GTGAAGTGAAATTAGGGTTT+AGG 0.284191 4_2:-62518480 None:intergenic
AGCTCAAAAGTGGGCAAGTT+TGG 0.290535 4_2:+62519286 Msa0613690:CDS
GAAATTAGGGTTTAGGGTTT+TGG 0.297029 4_2:-62518473 None:intergenic
ATTACCTGACTCTTCTTTGT+AGG 0.299624 4_2:-62520834 None:intergenic
GAAACCACCTCCTGCACTTT+AGG 0.305254 4_2:-62520618 None:intergenic
TAGATCGAAGTTTGAGGCTT+TGG 0.315791 4_2:+62520482 Msa0613690:CDS
AAAGAGTTTGAGCGAGTATA+GGG 0.317690 4_2:+62521851 Msa0613690:CDS
TGATGTTATTGGAATTGATT+TGG 0.319512 4_2:+62519428 Msa0613690:CDS
TGAAGTGAAATTAGGGTTTA+GGG 0.320670 4_2:-62518479 None:intergenic
TACCAATGGTGACACTTTCT+TGG 0.320696 4_2:+62520239 Msa0613690:CDS
ATGTGCGGTTGTAATAATAT+AGG 0.321543 4_2:-62518428 None:intergenic
TCCAACAGTACGACAAAATA+AGG 0.346294 4_2:-62522196 None:intergenic
AAAAGAGTTTGAGCGAGTAT+AGG 0.348496 4_2:+62521850 Msa0613690:CDS
ACTGCAGCTGCACTTTCATA+TGG 0.352369 4_2:+62520023 Msa0613690:CDS
CAATCTGAGGCAAACCTCTT+GGG 0.354482 4_2:-62521605 None:intergenic
ATCCCTGGGTATTGAGACTT+TGG 0.357413 4_2:+62520770 Msa0613690:CDS
CTTGGAGAATTTGACCTTGT+TGG 0.357711 4_2:+62521570 Msa0613690:CDS
AGATGATGAAATTAATAATA+TGG 0.357883 4_2:+62521734 Msa0613690:CDS
AAAGATGCTGGTAGAATTGC+CGG 0.362237 4_2:+62519969 Msa0613690:CDS
TCCTCTGATGGAGGTTCTCC+AGG 0.365670 4_2:+62522038 Msa0613690:CDS
CAATATTCTCCCAGCCAAAT+TGG 0.366163 4_2:+62519831 Msa0613690:CDS
GAGGTGGTTTCAGAGATCTT+TGG 0.369528 4_2:+62520630 Msa0613690:CDS
AACACAAAAGGAGATGAAAA+TGG 0.372682 4_2:+62519749 Msa0613690:CDS
GATGTTATTGGAATTGATTT+GGG 0.373282 4_2:+62519429 Msa0613690:CDS
TTCTCCAGGTGGTGGTGAAC+AGG 0.375092 4_2:+62522052 Msa0613690:CDS
CCTGCTGGTAGTGATGTTAT+TGG 0.376880 4_2:+62519417 Msa0613690:CDS
GGTGCCTTGACAATCTTATA+GGG 0.378876 4_2:-62519774 None:intergenic
TTGGCTGTGAAGTGAAATTA+GGG 0.383544 4_2:-62518486 None:intergenic
TCCCTGGGTATTGAGACTTT+GGG 0.389902 4_2:+62520771 Msa0613690:CDS
GTGCCTTTGTCCTTTCAATC+AGG 0.391952 4_2:-62520512 None:intergenic
CAGCTCTCCTTTCTGGTTGA+AGG 0.397732 4_2:-62519628 None:intergenic
CATTAAAGAAACACATGAAT+TGG 0.405929 4_2:-62519457 None:intergenic
ACCTCTTCATACTCTGCCTC+TGG 0.409681 4_2:-62522077 None:intergenic
TGTAGGAATTGTTGTGTTGC+GGG 0.416658 4_2:-62520817 None:intergenic
CAGCCATTTCACGCTCCCCT+TGG 0.422244 4_2:-62521533 None:intergenic
CAGATTACCATCCGCTCATC+AGG 0.424767 4_2:+62521702 Msa0613690:CDS
GGGATAGAGGAGTGACATCT+AGG 0.427451 4_2:-62520752 None:intergenic
CAAGATCGCGGCGGAGAGCA+CGG 0.429764 4_2:-62518591 None:intergenic
AGATGTCACTCCTCTATCCC+TGG 0.430112 4_2:+62520755 Msa0613690:CDS
ACCAATGGTGACACTTTCTT+GGG 0.432955 4_2:+62520240 Msa0613690:CDS
TCAATCTGAGGCAAACCTCT+TGG 0.435495 4_2:-62521606 None:intergenic
GCTCCAAGGGGAGCGTGAAA+TGG 0.435720 4_2:+62521530 Msa0613690:CDS
CCCATTGCAACAGCCTCATC+AGG 0.435835 4_2:-62520678 None:intergenic
TTTGGCACCAAACGTTTGAT+TGG 0.438874 4_2:+62519705 Msa0613690:CDS
GCACCAAACGTTTGATTGGT+AGG 0.443834 4_2:+62519709 Msa0613690:CDS
AACAAAAGCACCAATTTGGC+TGG 0.450750 4_2:-62519841 None:intergenic
AACAAAGCCGTGTCAAAGAT+TGG 0.451841 4_2:+62521984 Msa0613690:CDS
CTCTGTCTCTGCCTTTCGAT+CGG 0.453056 4_2:+62518621 Msa0613690:CDS
TTCATCACTGCTGATGCATC+CGG 0.456355 4_2:+62520432 Msa0613690:CDS
TTCAACCCATGCATCTCCAT+TGG 0.460739 4_2:-62519796 None:intergenic
TCAACCCATGCATCTCCATT+GGG 0.462137 4_2:-62519795 None:intergenic
GCGCCTACCAATCAAACGTT+TGG 0.472555 4_2:-62519712 None:intergenic
GTTAAACTTTCGTCGGAGAA+AGG 0.475478 4_2:+62522365 Msa0613690:three_prime_UTR
ATTTCCTTCGCAACCTCACT+AGG 0.475574 4_2:-62521882 None:intergenic
CAGAAAGGAGAGCTGCTTGT+TGG 0.476199 4_2:+62519636 Msa0613690:CDS
GTTGACTAGATCGAAGTTTG+AGG 0.481396 4_2:+62520476 Msa0613690:CDS
AACATCCTTGATAGATATGT+TGG 0.482621 4_2:-62520559 None:intergenic
TGGTACACCTGCCAAGCGTC+AGG 0.482660 4_2:+62519656 Msa0613690:CDS
AATTTCAAACGGTGTATTTG+AGG 0.485239 4_2:+62520118 Msa0613690:CDS
TCAAGTGGAGGTTCCTCTGA+TGG 0.485714 4_2:+62522026 Msa0613690:CDS
GTCTCAATACCCAGGGATAG+AGG 0.485922 4_2:-62520765 None:intergenic
TACTACAGTTCTAGGCCTGC+TGG 0.490672 4_2:+62519402 Msa0613690:intron
GCGGAGAGCACGGCGCAAGA+AGG 0.491117 4_2:-62518581 None:intergenic
GAGAGCACGGCGCAAGAAGG+CGG 0.491165 4_2:-62518578 None:intergenic
CTGCAGCTGCACTTTCATAT+GGG 0.491179 4_2:+62520024 Msa0613690:CDS
GCAATGGGAGCAGCTCTTCA+GGG 0.497054 4_2:+62520693 Msa0613690:CDS
GTTACAGCCTGACGCTTGGC+AGG 0.501358 4_2:-62519663 None:intergenic
CTTCAATGATGCTCAGAGGC+AGG 0.501906 4_2:+62519941 Msa0613690:CDS
TGCTGAAAGTTATCTACCAT+TGG 0.509311 4_2:+62522291 Msa0613690:three_prime_UTR
AGATGCCAACATATCTATCA+AGG 0.510131 4_2:+62520554 Msa0613690:CDS
CTCAGATTTGAGAACGGCTA+TGG 0.512317 4_2:+62521917 Msa0613690:CDS
TGATGATCCGCAAACACAAA+AGG 0.515016 4_2:+62519737 Msa0613690:CDS
TGAGGCAAACCTCTTGGGGC+AGG 0.516215 4_2:-62521600 None:intergenic
AATTCCTACAAAGAAGAGTC+AGG 0.516535 4_2:+62520830 Msa0613690:CDS
AAGATTGGTCAGCATATGTC+AGG 0.517534 4_2:+62521999 Msa0613690:CDS
TGAGCATCATTGAAGTAAGC+TGG 0.518266 4_2:-62519933 None:intergenic
TGGTAAATAACCTGATTGAA+AGG 0.518643 4_2:+62520502 Msa0613690:CDS
TGTTTCTTTAATGGAGGGAA+AGG 0.519248 4_2:+62519467 Msa0613690:CDS
TCAGGATTTACTCCTTTGCT+AGG 0.519309 4_2:-62520660 None:intergenic
CATTTGACATAGATGCCAAT+GGG 0.519858 4_2:+62521634 Msa0613690:CDS
TCATGTGTTTCTTTAATGGA+GGG 0.521862 4_2:+62519462 Msa0613690:CDS
GCTGCAGACAACAAGAGTCT+TGG 0.523262 4_2:+62521552 Msa0613690:CDS
TTCATGTGTTTCTTTAATGG+AGG 0.523829 4_2:+62519461 Msa0613690:CDS
TCAGACTCAAGTGGGTATCA+AGG 0.524218 4_2:+62521506 Msa0613690:CDS
ATGAGGTTCTTCTCGTCGGA+GGG 0.525590 4_2:+62520583 Msa0613690:CDS
GAAACTGCTGAGGCATACCT+TGG 0.527311 4_2:+62519879 Msa0613690:CDS
CATCATATGCAGCTCAAAAG+TGG 0.528387 4_2:+62519276 Msa0613690:CDS
TCCTGATGAGGCTGTTGCAA+TGG 0.529665 4_2:+62520677 Msa0613690:CDS
GTTGCATGCTCAGAGAGATC+AGG 0.532569 4_2:+62521770 Msa0613690:CDS
AGAAGGCGGCCATAGTGAAT+CGG 0.535245 4_2:-62518564 None:intergenic
GACTCGTGTACCTAAAGTGC+AGG 0.535807 4_2:+62520608 Msa0613690:CDS
TTGTAGGAATTGTTGTGTTG+CGG 0.536039 4_2:-62520818 None:intergenic
CCTGATGAGGCTGTTGCAAT+GGG 0.536816 4_2:+62520678 Msa0613690:CDS
TATGGGATGAACAGCAAAGA+GGG 0.537258 4_2:+62520041 Msa0613690:CDS
TGGGTATCAAGGTGCTCCAA+GGG 0.538510 4_2:+62521517 Msa0613690:CDS
GATGTCACTCCTCTATCCCT+GGG 0.540459 4_2:+62520756 Msa0613690:CDS
GGCAAACCTCTTGGGGCAGG+AGG 0.540636 4_2:-62521597 None:intergenic
AAAGTTATTGAGAATTCTGA+AGG 0.542496 4_2:+62519579 Msa0613690:CDS
CTGGGTATTGAGACTTTGGG+TGG 0.543172 4_2:+62520774 Msa0613690:CDS
AATTCTCAGCACTTCAAGAC+CGG 0.543184 4_2:-62519988 None:intergenic
GATTTGAGAACGGCTATGGC+AGG 0.546663 4_2:+62521921 Msa0613690:CDS
GTTGGTTACAGCCTGACGCT+TGG 0.547556 4_2:-62519667 None:intergenic
GGCACCCAATGGAGATGCAT+GGG 0.549734 4_2:+62519791 Msa0613690:CDS
GATGGAGGTTCTCCAGGTGG+TGG 0.550859 4_2:+62522044 Msa0613690:CDS
TTGAGAATTCTGAAGGAGCT+CGG 0.556650 4_2:+62519586 Msa0613690:CDS
GGAGCCTGTTCACCACCACC+TGG 0.557888 4_2:-62522056 None:intergenic
GTTGATGAGGTTCTTCTCGT+CGG 0.558124 4_2:+62520579 Msa0613690:CDS
ATCATATGCAGCTCAAAAGT+GGG 0.564862 4_2:+62519277 Msa0613690:CDS
CATATGTCAGGTGGGTCAAG+TGG 0.568288 4_2:+62522011 Msa0613690:CDS
TCTTTCAAGCAGCTCTTACA+GGG 0.569460 4_2:-62520534 None:intergenic
TCTGCCAAAGACAAATCCAC+TGG 0.570529 4_2:+62521669 Msa0613690:CDS
GTGGGTATCAAGGTGCTCCA+AGG 0.570815 4_2:+62521516 Msa0613690:CDS
GATGAGGTTCTTCTCGTCGG+AGG 0.572161 4_2:+62520582 Msa0613690:CDS
GATATTCAAATGCTTTGCAC+CGG 0.572709 4_2:-62520451 None:intergenic
GGCATTCCTCCTGCCCCAAG+AGG 0.573254 4_2:+62521591 Msa0613690:CDS
AATCTGAGGCAAACCTCTTG+GGG 0.574961 4_2:-62521604 None:intergenic
ATATGAAAGTGCAGCTGCAG+TGG 0.575044 4_2:-62520021 None:intergenic
AGGCACCCAATGGAGATGCA+TGG 0.577576 4_2:+62519790 Msa0613690:CDS
AGGATAAGCTTGCGTTGCAG+AGG 0.578244 4_2:+62520340 Msa0613690:CDS
GGCAAAACAAAGCACCTGAA+AGG 0.578986 4_2:-62519314 None:intergenic
AGTTATCTACCATTGGTTGG+TGG 0.579146 4_2:+62522298 Msa0613690:three_prime_UTR
AGGCAGGCAACAAAAGATGC+TGG 0.579182 4_2:+62519957 Msa0613690:CDS
TCCCAAGAAAGTGTCACCAT+TGG 0.580142 4_2:-62520241 None:intergenic
GATTCCTAGTGAGGTTGCGA+AGG 0.581066 4_2:+62521878 Msa0613690:CDS
AATCGAGTAGATTGATGTGT+CGG 0.581607 4_2:-62521826 None:intergenic
TGGTGGTGAACAGGCTCCAG+AGG 0.582066 4_2:+62522061 Msa0613690:CDS
ACATTTGACATAGATGCCAA+TGG 0.582385 4_2:+62521633 Msa0613690:CDS
TGGTTGAAGGCAACCACTGA+TGG 0.582430 4_2:-62519615 None:intergenic
AATGGTGACACTTTCTTGGG+AGG 0.584699 4_2:+62520243 Msa0613690:CDS
CATCAGCAGTGATGAAAGGA+AGG 0.584878 4_2:-62520425 None:intergenic
ACAAAAGCACCAATTTGGCT+GGG 0.595143 4_2:-62519840 None:intergenic
ATCTATCAAGGATGTTGATG+AGG 0.595284 4_2:+62520566 Msa0613690:CDS
TGTACCTAAAGTGCAGGAGG+TGG 0.596493 4_2:+62520614 Msa0613690:CDS
GTGGTTGCCTTCAACCAGAA+AGG 0.597350 4_2:+62519621 Msa0613690:CDS
GATGCATCAGCAGTGATGAA+AGG 0.598218 4_2:-62520429 None:intergenic
CGATCGAAAGGCAGAGACAG+AGG 0.598907 4_2:-62518620 None:intergenic
AGCTCGGACAACACCATCAG+TGG 0.601686 4_2:+62519602 Msa0613690:CDS
TATGAAAGTGCAGCTGCAGT+GGG 0.601744 4_2:-62520020 None:intergenic
AAGATTGTCAAGGCACCCAA+TGG 0.601896 4_2:+62519780 Msa0613690:CDS
GAAAGTTATCTACCATTGGT+TGG 0.603185 4_2:+62522295 Msa0613690:three_prime_UTR
CACCCAAAGTCTCAATACCC+AGG 0.604506 4_2:-62520773 None:intergenic
ACCTGGAGAACCTCCATCAG+AGG 0.605516 4_2:-62522039 None:intergenic
CCAATAACATCACTACCAGC+AGG 0.608458 4_2:-62519417 None:intergenic
GGGCAGGAGGAATGCCAACA+AGG 0.608917 4_2:-62521584 None:intergenic
TGCGAAGGAAATTGAAGATG+CGG 0.608991 4_2:+62521893 Msa0613690:CDS
ATTGGTCAGCATATGTCAGG+TGG 0.609221 4_2:+62522002 Msa0613690:CDS
AGAGACAGTAACAATCCCAT+TGG 0.610713 4_2:-62521649 None:intergenic
ATAGAGATTTACCGATCGAA+AGG 0.613056 4_2:-62518632 None:intergenic
GAGTCCTCCTGATGAGCGGA+TGG 0.614772 4_2:-62521709 None:intergenic
TTTCAGGTGAAAGCTACCAA+TGG 0.616098 4_2:+62520225 Msa0613690:intron
AGTGGAGGTTCCTCTGATGG+AGG 0.616462 4_2:+62522029 Msa0613690:CDS
ATATATTAACCACCAACCAA+TGG 0.616768 4_2:-62522307 None:intergenic
AGCTGACAATCAGACTCAAG+TGG 0.624033 4_2:+62521497 Msa0613690:CDS
ATGTCAGGTGGGTCAAGTGG+AGG 0.625917 4_2:+62522014 Msa0613690:CDS
ATGCTGACCAATCTTTGACA+CGG 0.628232 4_2:-62521991 None:intergenic
ACCCAAAGTCTCAATACCCA+GGG 0.628381 4_2:-62520772 None:intergenic
CTGAGAGTCCTCCTGATGAG+CGG 0.628649 4_2:-62521713 None:intergenic
TAGGGAAAAGATTCCTAGTG+AGG 0.630551 4_2:+62521869 Msa0613690:CDS
ATTACCATCCGCTCATCAGG+AGG 0.634993 4_2:+62521705 Msa0613690:CDS
CAGAGGAAGAAGCAAGATCG+CGG 0.635260 4_2:-62518603 None:intergenic
TGATAGTATTGATCTTGCAA+AGG 0.635285 4_2:+62520320 Msa0613690:CDS
TCTGATGGAGGTTCTCCAGG+TGG 0.636312 4_2:+62522041 Msa0613690:CDS
TCCAGAGGCAGAGTATGAAG+AGG 0.637119 4_2:+62522076 Msa0613690:CDS
TTGGTCAGCATATGTCAGGT+GGG 0.640684 4_2:+62522003 Msa0613690:CDS
GCTGACAATCAGACTCAAGT+GGG 0.641874 4_2:+62521498 Msa0613690:CDS
TAAGATGAAGGAAACTGCTG+AGG 0.643269 4_2:+62519869 Msa0613690:CDS
TCAAATGTGACTTCAATCTG+AGG 0.646753 4_2:-62521618 None:intergenic
ATGTTATTGGAATTGATTTG+GGG 0.649149 4_2:+62519430 Msa0613690:CDS
ATGCTCAGAGAGATCAGGAA+AGG 0.649172 4_2:+62521775 Msa0613690:CDS
CAAAGGAGTAAATCCTGATG+AGG 0.650174 4_2:+62520665 Msa0613690:CDS
TGCGGTCTCAGATTTGAGAA+CGG 0.650827 4_2:+62521911 Msa0613690:CDS
TTTGGAAAGAGTCCTAGCAA+AGG 0.662243 4_2:+62520648 Msa0613690:CDS
TAACCTGATTGAAAGGACAA+AGG 0.662910 4_2:+62520509 Msa0613690:CDS
GGTACCCTATAAGATTGTCA+AGG 0.671230 4_2:+62519770 Msa0613690:CDS
TCGTGTACCTAAAGTGCAGG+AGG 0.674141 4_2:+62520611 Msa0613690:CDS
ATATGGGATGAACAGCAAAG+AGG 0.685497 4_2:+62520040 Msa0613690:CDS
CTTCAGGGTGGTATTCTCCG+TGG 0.686079 4_2:+62520708 Msa0613690:CDS
ATGGGATGAACAGCAAAGAG+GGG 0.688004 4_2:+62520042 Msa0613690:CDS
AGGAAGAAGCAAGATCGCGG+CGG 0.707753 4_2:-62518600 None:intergenic
GGGTATCAAGGTGCTCCAAG+GGG 0.712553 4_2:+62521518 Msa0613690:CDS
CTTACTTCAATGATGCTCAG+AGG 0.714640 4_2:+62519937 Msa0613690:CDS
ATGGGAGCAGCTCTTCAGGG+TGG 0.716807 4_2:+62520696 Msa0613690:CDS
GCAGCTCTTTAACATCACCA+CGG 0.761484 4_2:-62520725 None:intergenic
GAATGAGGTTATGAAATGTG+CGG 0.775661 4_2:-62518443 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTGTATTTTTTAGTAAA+AGG + chr4_2:62522171-62522190 Msa0613690:three_prime_UTR 10.0%
!! AAAATTATGAAAAATTAGAC+TGG - chr4_2:62519049-62519068 None:intergenic 15.0%
!! AAAATTATGAAAAATTAGAC+TGG - chr4_2:62519049-62519068 None:intergenic 15.0%
!!! TTTTTCTTAAAAACAGTTTT+TGG - chr4_2:62521102-62521121 None:intergenic 15.0%
!! TACATTAAATAAATCTGAAT+AGG - chr4_2:62521427-62521446 None:intergenic 15.0%
!! AGATGATGAAATTAATAATA+TGG + chr4_2:62521734-62521753 Msa0613690:CDS 15.0%
!!! ATATTATTTTGCAATTTGAT+TGG + chr4_2:62522326-62522345 Msa0613690:three_prime_UTR 15.0%
!!! AATAATAACTGTTGATAACA+TGG + chr4_2:62519136-62519155 Msa0613690:intron 20.0%
!!! TCCATTTTAGAAATTTCAAA+CGG + chr4_2:62520107-62520126 Msa0613690:CDS 20.0%
!! ACATAATTATTCCTAATGAT+AGG - chr4_2:62520183-62520202 None:intergenic 20.0%
!! ATTAGGAATAATTATGTAAG+TGG + chr4_2:62520186-62520205 Msa0613690:intron 20.0%
!! ATTTAAAAACAAAATCTGCT+TGG + chr4_2:62521122-62521141 Msa0613690:intron 20.0%
!!! TTCAAAAACTGATTTTGAAA+AGG + chr4_2:62521247-62521266 Msa0613690:intron 20.0%
!! TCAGATTTATTTAATGTAAC+AGG + chr4_2:62521429-62521448 Msa0613690:intron 20.0%
!!! AATTTTGAAATCATTGTTTC+AGG + chr4_2:62521461-62521480 Msa0613690:intron 20.0%
!!! CAAATTTTGATGATGTTATT+CGG - chr4_2:62522239-62522258 None:intergenic 20.0%
!!! TATTTTTGTTAAACTTTCGT+CGG + chr4_2:62522358-62522377 Msa0613690:three_prime_UTR 20.0%
!! TTTAACAGCAAAAAAAAACA+AGG - chr4_2:62522406-62522425 None:intergenic 20.0%
! TGATGTTATTGGAATTGATT+TGG + chr4_2:62519428-62519447 Msa0613690:CDS 25.0%
!! GATGTTATTGGAATTGATTT+GGG + chr4_2:62519429-62519448 Msa0613690:CDS 25.0%
!!! ATGTTATTGGAATTGATTTG+GGG + chr4_2:62519430-62519449 Msa0613690:CDS 25.0%
! CATTAAAGAAACACATGAAT+TGG - chr4_2:62519460-62519479 None:intergenic 25.0%
! CAATTCATGTGTTTCTTTAA+TGG + chr4_2:62519458-62519477 Msa0613690:CDS 25.0%
!!! CTATTTCTCTTGATTACTTT+TGG + chr4_2:62519497-62519516 Msa0613690:intron 25.0%
!!! ATTACTTTTGGACATGTTTT+TGG + chr4_2:62519509-62519528 Msa0613690:intron 25.0%
!!! TAACTTTAGGATTCTGAAAA+GGG - chr4_2:62519566-62519585 None:intergenic 25.0%
!!! ATAACTTTAGGATTCTGAAA+AGG - chr4_2:62519567-62519586 None:intergenic 25.0%
! TCAGAATTCTCAATAACTTT+AGG - chr4_2:62519579-62519598 None:intergenic 25.0%
! AAAGTTATTGAGAATTCTGA+AGG + chr4_2:62519579-62519598 Msa0613690:CDS 25.0%
!! TTTTGTTCTTACTAAGATGA+AGG + chr4_2:62519857-62519876 Msa0613690:CDS 25.0%
!!! CTTTAGAAATTGTTTTTCCA+AGG - chr4_2:62519899-62519918 None:intergenic 25.0%
!! ACCGTTTGAAATTTCTAAAA+TGG - chr4_2:62520111-62520130 None:intergenic 25.0%
! TAATGATAGGTTAAGAAAGA+TGG - chr4_2:62520170-62520189 None:intergenic 25.0%
! ATCTTTCTTAACCTATCATT+AGG + chr4_2:62520169-62520188 Msa0613690:intron 25.0%
!! TCACTGATAACATATTTTTC+AGG + chr4_2:62520209-62520228 Msa0613690:intron 25.0%
!!! AGATTTTGATAATGCTTTGT+TGG + chr4_2:62520269-62520288 Msa0613690:CDS 25.0%
!!! AGAATTGTTTTCTATTTCTG+AGG + chr4_2:62520897-62520916 Msa0613690:intron 25.0%
!!! AGTAAGATACTTTTTTTGGA+GGG - chr4_2:62520977-62520996 None:intergenic 25.0%
!!! TGTCAGTAAGATACTTTTTT+TGG - chr4_2:62520981-62521000 None:intergenic 25.0%
! AAACCAAAATAAAACCAAAC+AGG - chr4_2:62521045-62521064 None:intergenic 25.0%
!!! TTTTGAAAAGGAAATCAAAC+AGG + chr4_2:62521259-62521278 Msa0613690:intron 25.0%
! GAAAACAAAAGAGAAATCTA+GGG - chr4_2:62521285-62521304 None:intergenic 25.0%
!!! GTAACATGTAGATTTTGAAA+AGG + chr4_2:62521343-62521362 Msa0613690:intron 25.0%
!!! TTTTGAAAAGGAAATCAAAC+AGG + chr4_2:62521259-62521278 Msa0613690:intron 25.0%
TGAAGTGAAATTAGGGTTTA+GGG - chr4_2:62518482-62518501 None:intergenic 30.0%
!!! AAGAAGGGTTTAGTTTTGTT+TGG - chr4_2:62518508-62518527 None:intergenic 30.0%
!! TCTACTTTTCACATAATCTG+TGG + chr4_2:62518863-62518882 Msa0613690:intron 30.0%
!!! TTTTTTGTGTTACCGATCAT+TGG + chr4_2:62518940-62518959 Msa0613690:intron 30.0%
! TTTTTGTGTTACCGATCATT+GGG + chr4_2:62518941-62518960 Msa0613690:intron 30.0%
AATATACATGACCCAATGAT+CGG - chr4_2:62518955-62518974 None:intergenic 30.0%
ATTGGGTCATGTATATTTGT+TGG + chr4_2:62518958-62518977 Msa0613690:intron 30.0%
TGATAACATGGTATCATTCA+TGG + chr4_2:62519148-62519167 Msa0613690:intron 30.0%
CTGCAAAACAATCAAAAGAA+AGG - chr4_2:62519237-62519256 None:intergenic 30.0%
TTCATGTGTTTCTTTAATGG+AGG + chr4_2:62519461-62519480 Msa0613690:CDS 30.0%
TCATGTGTTTCTTTAATGGA+GGG + chr4_2:62519462-62519481 Msa0613690:CDS 30.0%
!! AAAAAGAGTATTTGTTGGGT+TGG - chr4_2:62519688-62519707 None:intergenic 30.0%
! AACCCAACAAATACTCTTTT+TGG + chr4_2:62519687-62519706 Msa0613690:CDS 30.0%
!! TGCCAAAAAGAGTATTTGTT+GGG - chr4_2:62519692-62519711 None:intergenic 30.0%
AACACAAAAGGAGATGAAAA+TGG + chr4_2:62519749-62519768 Msa0613690:CDS 30.0%
!! TAAGAACAAAAGCACCAATT+TGG - chr4_2:62519848-62519867 None:intergenic 30.0%
AATTTCAAACGGTGTATTTG+AGG + chr4_2:62520118-62520137 Msa0613690:CDS 30.0%
!! TGATAGTATTGATCTTGCAA+AGG + chr4_2:62520320-62520339 Msa0613690:CDS 30.0%
TGGTAAATAACCTGATTGAA+AGG + chr4_2:62520502-62520521 Msa0613690:CDS 30.0%
AACATCCTTGATAGATATGT+TGG - chr4_2:62520562-62520581 None:intergenic 30.0%
!!! GTAAGATACTTTTTTTGGAG+GGG - chr4_2:62520976-62520995 None:intergenic 30.0%
!!! CAGTAAGATACTTTTTTTGG+AGG - chr4_2:62520978-62520997 None:intergenic 30.0%
GAACCATTGTAAATAACTGA+AGG + chr4_2:62521019-62521038 Msa0613690:intron 30.0%
GTTCACATAGAATCAGAAAA+AGG + chr4_2:62521186-62521205 Msa0613690:intron 30.0%
ATAAAACAGAAACACCTTCT+AGG - chr4_2:62521218-62521237 None:intergenic 30.0%
CGAAAACAAAAGAGAAATCT+AGG - chr4_2:62521286-62521305 None:intergenic 30.0%
GAATAGTGAATCGATAAAAC+AGG - chr4_2:62521309-62521328 None:intergenic 30.0%
CTTTCAGCACAAACAAAAAA+TGG - chr4_2:62522280-62522299 None:intergenic 30.0%
ATATATTAACCACCAACCAA+TGG - chr4_2:62522310-62522329 None:intergenic 30.0%
GAATGAGGTTATGAAATGTG+CGG - chr4_2:62518446-62518465 None:intergenic 35.0%
!! GAAATTAGGGTTTAGGGTTT+TGG - chr4_2:62518476-62518495 None:intergenic 35.0%
GTGAAGTGAAATTAGGGTTT+AGG - chr4_2:62518483-62518502 None:intergenic 35.0%
TTGGCTGTGAAGTGAAATTA+GGG - chr4_2:62518489-62518508 None:intergenic 35.0%
TTTGGCTGTGAAGTGAAATT+AGG - chr4_2:62518490-62518509 None:intergenic 35.0%
! CTCTATTTTCCGATTCACTA+TGG + chr4_2:62518555-62518574 Msa0613690:intron 35.0%
ATAGAGATTTACCGATCGAA+AGG - chr4_2:62518635-62518654 None:intergenic 35.0%
TGAGCAAAAATAGTGAAGTG+AGG - chr4_2:62518660-62518679 None:intergenic 35.0%
TTGCATAGTGTATCAATCTG+TGG + chr4_2:62518727-62518746 Msa0613690:intron 35.0%
TGCATAGTGTATCAATCTGT+GGG + chr4_2:62518728-62518747 Msa0613690:intron 35.0%
GTTCCGTGATACTATCATTT+GGG + chr4_2:62518885-62518904 Msa0613690:intron 35.0%
AGACCCAAATGATAGTATCA+CGG - chr4_2:62518891-62518910 None:intergenic 35.0%
CTGTTACTATGTTCAATGAC+AGG + chr4_2:62519003-62519022 Msa0613690:intron 35.0%
!! TTGATTGTTTTGCAGTTGAC+AGG + chr4_2:62519242-62519261 Msa0613690:intron 35.0%
ATCATATGCAGCTCAAAAGT+GGG + chr4_2:62519277-62519296 Msa0613690:CDS 35.0%
! TGCTTTTGTACTACAGTTCT+AGG + chr4_2:62519394-62519413 Msa0613690:intron 35.0%
TGTTTCTTTAATGGAGGGAA+AGG + chr4_2:62519467-62519486 Msa0613690:CDS 35.0%
!! GTGCCAAAAAGAGTATTTGT+TGG - chr4_2:62519693-62519712 None:intergenic 35.0%
! TTCATCTCCTTTTGTGTTTG+CGG - chr4_2:62519747-62519766 None:intergenic 35.0%
!!! CTCATTGCTGTTTTTGATCT+CGG + chr4_2:62520065-62520084 Msa0613690:CDS 35.0%
GATATTCAAATGCTTTGCAC+CGG - chr4_2:62520454-62520473 None:intergenic 35.0%
TAACCTGATTGAAAGGACAA+AGG + chr4_2:62520509-62520528 Msa0613690:CDS 35.0%
AGATGCCAACATATCTATCA+AGG + chr4_2:62520554-62520573 Msa0613690:CDS 35.0%
ATCTATCAAGGATGTTGATG+AGG + chr4_2:62520566-62520585 Msa0613690:CDS 35.0%
TTGTAGGAATTGTTGTGTTG+CGG - chr4_2:62520821-62520840 None:intergenic 35.0%
AATTCCTACAAAGAAGAGTC+AGG + chr4_2:62520830-62520849 Msa0613690:CDS 35.0%
ATTACCTGACTCTTCTTTGT+AGG - chr4_2:62520837-62520856 None:intergenic 35.0%
!!! ATACTTTTTTTGGAGGGGTT+GGG - chr4_2:62520971-62520990 None:intergenic 35.0%
AGTATCTTACTGACATTCCA+AGG + chr4_2:62520986-62521005 Msa0613690:intron 35.0%
GTATCTTACTGACATTCCAA+GGG + chr4_2:62520987-62521006 Msa0613690:intron 35.0%
AGGCCTTCAGTTATTTACAA+TGG - chr4_2:62521025-62521044 None:intergenic 35.0%
TAAATAACTGAAGGCCTGTT+TGG + chr4_2:62521028-62521047 Msa0613690:intron 35.0%
!!! AGGCCTGTTTGGTTTTATTT+TGG + chr4_2:62521039-62521058 Msa0613690:intron 35.0%
GAAAAAGGATAACACCTAGA+AGG + chr4_2:62521201-62521220 Msa0613690:intron 35.0%
TCAAATGTGACTTCAATCTG+AGG - chr4_2:62521621-62521640 None:intergenic 35.0%
ACATTTGACATAGATGCCAA+TGG + chr4_2:62521633-62521652 Msa0613690:CDS 35.0%
CATTTGACATAGATGCCAAT+GGG + chr4_2:62521634-62521653 Msa0613690:CDS 35.0%
!! TTTTCCAGTGGATTTGTCTT+TGG - chr4_2:62521676-62521695 None:intergenic 35.0%
! AATCTGTTGTTCTTTTCCAG+TGG - chr4_2:62521688-62521707 None:intergenic 35.0%
AATCGAGTAGATTGATGTGT+CGG - chr4_2:62521829-62521848 None:intergenic 35.0%
AAAAGAGTTTGAGCGAGTAT+AGG + chr4_2:62521850-62521869 Msa0613690:CDS 35.0%
AAAGAGTTTGAGCGAGTATA+GGG + chr4_2:62521851-62521870 Msa0613690:CDS 35.0%
!!! TCCTTATTTTGTCGTACTGT+TGG + chr4_2:62522195-62522214 Msa0613690:three_prime_UTR 35.0%
TCCAACAGTACGACAAAATA+AGG - chr4_2:62522199-62522218 None:intergenic 35.0%
TGCTGAAAGTTATCTACCAT+TGG + chr4_2:62522291-62522310 Msa0613690:three_prime_UTR 35.0%
GAAAGTTATCTACCATTGGT+TGG + chr4_2:62522295-62522314 Msa0613690:three_prime_UTR 35.0%
AGAGAGAGAGAGAGAAAGAA+GGG - chr4_2:62518523-62518542 None:intergenic 40.0%
GGTTCCGTGATACTATCATT+TGG + chr4_2:62518884-62518903 Msa0613690:intron 40.0%
TGTGTGTTAGGGATGATGAA+AGG + chr4_2:62518914-62518933 Msa0613690:intron 40.0%
TGGTATCATTCATGGAACAG+CGG + chr4_2:62519156-62519175 Msa0613690:intron 40.0%
! CACTTTTGAGCTGCATATGA+TGG - chr4_2:62519278-62519297 None:intergenic 40.0%
CATCATATGCAGCTCAAAAG+TGG + chr4_2:62519276-62519295 Msa0613690:CDS 40.0%
TGCCTTTGTTCTGTACTGTA+TGG + chr4_2:62519333-62519352 Msa0613690:intron 40.0%
TGCCATACAGTACAGAACAA+AGG - chr4_2:62519338-62519357 None:intergenic 40.0%
CTTTAATGGAGGGAAAGGTA+AGG + chr4_2:62519472-62519491 Msa0613690:intron 40.0%
!!! TTGGACATGTTTTTGGTGCA+TGG + chr4_2:62519516-62519535 Msa0613690:intron 40.0%
! AAGGGCATAAACATTAGTCC+AGG - chr4_2:62519548-62519567 None:intergenic 40.0%
! TTGAGAATTCTGAAGGAGCT+CGG + chr4_2:62519586-62519605 Msa0613690:CDS 40.0%
TTTGGCACCAAACGTTTGAT+TGG + chr4_2:62519705-62519724 Msa0613690:CDS 40.0%
TGATGATCCGCAAACACAAA+AGG + chr4_2:62519737-62519756 Msa0613690:CDS 40.0%
GGTACCCTATAAGATTGTCA+AGG + chr4_2:62519770-62519789 Msa0613690:CDS 40.0%
GGTGCCTTGACAATCTTATA+GGG - chr4_2:62519777-62519796 None:intergenic 40.0%
CAATATTCTCCCAGCCAAAT+TGG + chr4_2:62519831-62519850 Msa0613690:CDS 40.0%
!! ACAAAAGCACCAATTTGGCT+GGG - chr4_2:62519843-62519862 None:intergenic 40.0%
!! AACAAAAGCACCAATTTGGC+TGG - chr4_2:62519844-62519863 None:intergenic 40.0%
TAAGATGAAGGAAACTGCTG+AGG + chr4_2:62519869-62519888 Msa0613690:CDS 40.0%
TGAGCATCATTGAAGTAAGC+TGG - chr4_2:62519936-62519955 None:intergenic 40.0%
CTTACTTCAATGATGCTCAG+AGG + chr4_2:62519937-62519956 Msa0613690:CDS 40.0%
AAAGATGCTGGTAGAATTGC+CGG + chr4_2:62519969-62519988 Msa0613690:CDS 40.0%
AATTCTCAGCACTTCAAGAC+CGG - chr4_2:62519991-62520010 None:intergenic 40.0%
ATATGGGATGAACAGCAAAG+AGG + chr4_2:62520040-62520059 Msa0613690:CDS 40.0%
TATGGGATGAACAGCAAAGA+GGG + chr4_2:62520041-62520060 Msa0613690:CDS 40.0%
!!! ATTGCTGTTTTTGATCTCGG+AGG + chr4_2:62520068-62520087 Msa0613690:CDS 40.0%
! TTTCAGGTGAAAGCTACCAA+TGG + chr4_2:62520225-62520244 Msa0613690:intron 40.0%
TACCAATGGTGACACTTTCT+TGG + chr4_2:62520239-62520258 Msa0613690:CDS 40.0%
ACCAATGGTGACACTTTCTT+GGG + chr4_2:62520240-62520259 Msa0613690:CDS 40.0%
GTTGACTAGATCGAAGTTTG+AGG + chr4_2:62520476-62520495 Msa0613690:CDS 40.0%
! TAGATCGAAGTTTGAGGCTT+TGG + chr4_2:62520482-62520501 Msa0613690:CDS 40.0%
TCTTTCAAGCAGCTCTTACA+GGG - chr4_2:62520537-62520556 None:intergenic 40.0%
ATCTTTCAAGCAGCTCTTAC+AGG - chr4_2:62520538-62520557 None:intergenic 40.0%
TTTGGAAAGAGTCCTAGCAA+AGG + chr4_2:62520648-62520667 Msa0613690:CDS 40.0%
TCAGGATTTACTCCTTTGCT+AGG - chr4_2:62520663-62520682 None:intergenic 40.0%
CAAAGGAGTAAATCCTGATG+AGG + chr4_2:62520665-62520684 Msa0613690:CDS 40.0%
TGTAGGAATTGTTGTGTTGC+GGG - chr4_2:62520820-62520839 None:intergenic 40.0%
!!! TACTTTTTTTGGAGGGGTTG+GGG - chr4_2:62520970-62520989 None:intergenic 40.0%
!!! GATACTTTTTTTGGAGGGGT+TGG - chr4_2:62520972-62520991 None:intergenic 40.0%
ATGGTTCTCTTCTTTACCCT+TGG - chr4_2:62521006-62521025 None:intergenic 40.0%
TCGCGAAAACGAGAAACTTA+GGG - chr4_2:62521381-62521400 None:intergenic 40.0%
CTTGGAGAATTTGACCTTGT+TGG + chr4_2:62521570-62521589 Msa0613690:CDS 40.0%
AGAGACAGTAACAATCCCAT+TGG - chr4_2:62521652-62521671 None:intergenic 40.0%
TAGGGAAAAGATTCCTAGTG+AGG + chr4_2:62521869-62521888 Msa0613690:CDS 40.0%
TGCGAAGGAAATTGAAGATG+CGG + chr4_2:62521893-62521912 Msa0613690:CDS 40.0%
AACAAAGCCGTGTCAAAGAT+TGG + chr4_2:62521984-62522003 Msa0613690:CDS 40.0%
ATGCTGACCAATCTTTGACA+CGG - chr4_2:62521994-62522013 None:intergenic 40.0%
! AAGATTGGTCAGCATATGTC+AGG + chr4_2:62521999-62522018 Msa0613690:CDS 40.0%
! AGTTATCTACCATTGGTTGG+TGG + chr4_2:62522298-62522317 Msa0613690:three_prime_UTR 40.0%
GTTAAACTTTCGTCGGAGAA+AGG + chr4_2:62522365-62522384 Msa0613690:three_prime_UTR 40.0%
!!! GGTTTTGGTAGTGACGAATG+AGG - chr4_2:62518461-62518480 None:intergenic 45.0%
GAGAGAGAGAGAGAGAAAGA+AGG - chr4_2:62518524-62518543 None:intergenic 45.0%
! ATCTGTGTGAATCTGAGACG+TGG + chr4_2:62518811-62518830 Msa0613690:intron 45.0%
TTTGGGTCTCTGTGTGTGTT+AGG + chr4_2:62518902-62518921 Msa0613690:intron 45.0%
TTGGGTCTCTGTGTGTGTTA+GGG + chr4_2:62518903-62518922 Msa0613690:intron 45.0%
TGTTGGATTACCTTTGCGAC+TGG + chr4_2:62518975-62518994 Msa0613690:intron 45.0%
AACAGTATAGCCAGTCGCAA+AGG - chr4_2:62518988-62519007 None:intergenic 45.0%
AGCTCAAAAGTGGGCAAGTT+TGG + chr4_2:62519286-62519305 Msa0613690:CDS 45.0%
! GGCAAAACAAAGCACCTGAA+AGG - chr4_2:62519317-62519336 None:intergenic 45.0%
CCAATAACATCACTACCAGC+AGG - chr4_2:62519420-62519439 None:intergenic 45.0%
! CCTGCTGGTAGTGATGTTAT+TGG + chr4_2:62519417-62519436 Msa0613690:CDS 45.0%
!! TTTGGTGCATGGTTTTTGCC+TGG + chr4_2:62519527-62519546 Msa0613690:intron 45.0%
GCACCAAACGTTTGATTGGT+AGG + chr4_2:62519709-62519728 Msa0613690:CDS 45.0%
GGGTGCCTTGACAATCTTAT+AGG - chr4_2:62519778-62519797 None:intergenic 45.0%
! AAGATTGTCAAGGCACCCAA+TGG + chr4_2:62519780-62519799 Msa0613690:CDS 45.0%
TCAACCCATGCATCTCCATT+GGG - chr4_2:62519798-62519817 None:intergenic 45.0%
TTCAACCCATGCATCTCCAT+TGG - chr4_2:62519799-62519818 None:intergenic 45.0%
! TATGAAAGTGCAGCTGCAGT+GGG - chr4_2:62520023-62520042 None:intergenic 45.0%
! ATATGAAAGTGCAGCTGCAG+TGG - chr4_2:62520024-62520043 None:intergenic 45.0%
ACTGCAGCTGCACTTTCATA+TGG + chr4_2:62520023-62520042 Msa0613690:CDS 45.0%
CTGCAGCTGCACTTTCATAT+GGG + chr4_2:62520024-62520043 Msa0613690:CDS 45.0%
ATGGGATGAACAGCAAAGAG+GGG + chr4_2:62520042-62520061 Msa0613690:CDS 45.0%
GGTTAAGAAAGATGGCAGCA+TGG - chr4_2:62520162-62520181 None:intergenic 45.0%
!! TCCCAAGAAAGTGTCACCAT+TGG - chr4_2:62520244-62520263 None:intergenic 45.0%
AATGGTGACACTTTCTTGGG+AGG + chr4_2:62520243-62520262 Msa0613690:CDS 45.0%
CATCAGCAGTGATGAAAGGA+AGG - chr4_2:62520428-62520447 None:intergenic 45.0%
GATGCATCAGCAGTGATGAA+AGG - chr4_2:62520432-62520451 None:intergenic 45.0%
TTCATCACTGCTGATGCATC+CGG + chr4_2:62520432-62520451 Msa0613690:CDS 45.0%
GTGCCTTTGTCCTTTCAATC+AGG - chr4_2:62520515-62520534 None:intergenic 45.0%
! GTTGATGAGGTTCTTCTCGT+CGG + chr4_2:62520579-62520598 Msa0613690:CDS 45.0%
GAGGTGGTTTCAGAGATCTT+TGG + chr4_2:62520630-62520649 Msa0613690:CDS 45.0%
GCAGCTCTTTAACATCACCA+CGG - chr4_2:62520728-62520747 None:intergenic 45.0%
!! ATCCCTGGGTATTGAGACTT+TGG + chr4_2:62520770-62520789 Msa0613690:CDS 45.0%
!! TCCCTGGGTATTGAGACTTT+GGG + chr4_2:62520771-62520790 Msa0613690:CDS 45.0%
ACCCAAAGTCTCAATACCCA+GGG - chr4_2:62520775-62520794 None:intergenic 45.0%
!!! ACTTTTTTTGGAGGGGTTGG+GGG - chr4_2:62520969-62520988 None:intergenic 45.0%
CTCGCGAAAACGAGAAACTT+AGG - chr4_2:62521382-62521401 None:intergenic 45.0%
AGCTGACAATCAGACTCAAG+TGG + chr4_2:62521497-62521516 Msa0613690:CDS 45.0%
GCTGACAATCAGACTCAAGT+GGG + chr4_2:62521498-62521517 Msa0613690:CDS 45.0%
TCAGACTCAAGTGGGTATCA+AGG + chr4_2:62521506-62521525 Msa0613690:CDS 45.0%
! AATCTGAGGCAAACCTCTTG+GGG - chr4_2:62521607-62521626 None:intergenic 45.0%
! CAATCTGAGGCAAACCTCTT+GGG - chr4_2:62521608-62521627 None:intergenic 45.0%
! TCAATCTGAGGCAAACCTCT+TGG - chr4_2:62521609-62521628 None:intergenic 45.0%
TCTGCCAAAGACAAATCCAC+TGG + chr4_2:62521669-62521688 Msa0613690:CDS 45.0%
ATGCTCAGAGAGATCAGGAA+AGG + chr4_2:62521775-62521794 Msa0613690:CDS 45.0%
ATTTCCTTCGCAACCTCACT+AGG - chr4_2:62521885-62521904 None:intergenic 45.0%
TGCGGTCTCAGATTTGAGAA+CGG + chr4_2:62521911-62521930 Msa0613690:CDS 45.0%
CTCAGATTTGAGAACGGCTA+TGG + chr4_2:62521917-62521936 Msa0613690:CDS 45.0%
ATTGGTCAGCATATGTCAGG+TGG + chr4_2:62522002-62522021 Msa0613690:CDS 45.0%
TTGGTCAGCATATGTCAGGT+GGG + chr4_2:62522003-62522022 Msa0613690:CDS 45.0%
AGAAGGCGGCCATAGTGAAT+CGG - chr4_2:62518567-62518586 None:intergenic 50.0%
CAGAGGAAGAAGCAAGATCG+CGG - chr4_2:62518606-62518625 None:intergenic 50.0%
CTCTGTCTCTGCCTTTCGAT+CGG + chr4_2:62518621-62518640 Msa0613690:CDS 50.0%
! CAAGTTTGGCTCGACCTTTC+AGG + chr4_2:62519300-62519319 Msa0613690:CDS 50.0%
!! TACTACAGTTCTAGGCCTGC+TGG + chr4_2:62519402-62519421 Msa0613690:intron 50.0%
TGGTTGAAGGCAACCACTGA+TGG - chr4_2:62519618-62519637 None:intergenic 50.0%
GTGGTTGCCTTCAACCAGAA+AGG + chr4_2:62519621-62519640 Msa0613690:CDS 50.0%
!! CAGCTCTCCTTTCTGGTTGA+AGG - chr4_2:62519631-62519650 None:intergenic 50.0%
CAACAAGCAGCTCTCCTTTC+TGG - chr4_2:62519638-62519657 None:intergenic 50.0%
CAGAAAGGAGAGCTGCTTGT+TGG + chr4_2:62519636-62519655 Msa0613690:CDS 50.0%
GCGCCTACCAATCAAACGTT+TGG - chr4_2:62519715-62519734 None:intergenic 50.0%
GAAACTGCTGAGGCATACCT+TGG + chr4_2:62519879-62519898 Msa0613690:CDS 50.0%
CTTCAATGATGCTCAGAGGC+AGG + chr4_2:62519941-62519960 Msa0613690:CDS 50.0%
AGGCAGGCAACAAAAGATGC+TGG + chr4_2:62519957-62519976 Msa0613690:CDS 50.0%
!!! GCTGTTTTTGATCTCGGAGG+TGG + chr4_2:62520071-62520090 Msa0613690:CDS 50.0%
AGGATAAGCTTGCGTTGCAG+AGG + chr4_2:62520340-62520359 Msa0613690:CDS 50.0%
ATGAGGTTCTTCTCGTCGGA+GGG + chr4_2:62520583-62520602 Msa0613690:CDS 50.0%
GACTCGTGTACCTAAAGTGC+AGG + chr4_2:62520608-62520627 Msa0613690:CDS 50.0%
TCGTGTACCTAAAGTGCAGG+AGG + chr4_2:62520611-62520630 Msa0613690:CDS 50.0%
TGTACCTAAAGTGCAGGAGG+TGG + chr4_2:62520614-62520633 Msa0613690:CDS 50.0%
GAAACCACCTCCTGCACTTT+AGG - chr4_2:62520621-62520640 None:intergenic 50.0%
TCCTGATGAGGCTGTTGCAA+TGG + chr4_2:62520677-62520696 Msa0613690:CDS 50.0%
CCTGATGAGGCTGTTGCAAT+GGG + chr4_2:62520678-62520697 Msa0613690:CDS 50.0%
GGGATAGAGGAGTGACATCT+AGG - chr4_2:62520755-62520774 None:intergenic 50.0%
AGATGTCACTCCTCTATCCC+TGG + chr4_2:62520755-62520774 Msa0613690:CDS 50.0%
GATGTCACTCCTCTATCCCT+GGG + chr4_2:62520756-62520775 Msa0613690:CDS 50.0%
GTCTCAATACCCAGGGATAG+AGG - chr4_2:62520768-62520787 None:intergenic 50.0%
CACCCAAAGTCTCAATACCC+AGG - chr4_2:62520776-62520795 None:intergenic 50.0%
!! CTGGGTATTGAGACTTTGGG+TGG + chr4_2:62520774-62520793 Msa0613690:CDS 50.0%
! TGGGTATCAAGGTGCTCCAA+GGG + chr4_2:62521517-62521536 Msa0613690:CDS 50.0%
GCTGCAGACAACAAGAGTCT+TGG + chr4_2:62521552-62521571 Msa0613690:CDS 50.0%
CAGATTACCATCCGCTCATC+AGG + chr4_2:62521702-62521721 Msa0613690:CDS 50.0%
ATTACCATCCGCTCATCAGG+AGG + chr4_2:62521705-62521724 Msa0613690:CDS 50.0%
GTTGCATGCTCAGAGAGATC+AGG + chr4_2:62521770-62521789 Msa0613690:CDS 50.0%
GATTCCTAGTGAGGTTGCGA+AGG + chr4_2:62521878-62521897 Msa0613690:CDS 50.0%
GATTTGAGAACGGCTATGGC+AGG + chr4_2:62521921-62521940 Msa0613690:CDS 50.0%
CATATGTCAGGTGGGTCAAG+TGG + chr4_2:62522011-62522030 Msa0613690:CDS 50.0%
TCAAGTGGAGGTTCCTCTGA+TGG + chr4_2:62522026-62522045 Msa0613690:CDS 50.0%
TCCAGAGGCAGAGTATGAAG+AGG + chr4_2:62522076-62522095 Msa0613690:CDS 50.0%
ACCTCTTCATACTCTGCCTC+TGG - chr4_2:62522080-62522099 None:intergenic 50.0%
AGGAAGAAGCAAGATCGCGG+CGG - chr4_2:62518603-62518622 None:intergenic 55.0%
CGATCGAAAGGCAGAGACAG+AGG - chr4_2:62518623-62518642 None:intergenic 55.0%
AGCTCGGACAACACCATCAG+TGG + chr4_2:62519602-62519621 Msa0613690:CDS 55.0%
GTTGGTTACAGCCTGACGCT+TGG - chr4_2:62519670-62519689 None:intergenic 55.0%
AGGCACCCAATGGAGATGCA+TGG + chr4_2:62519790-62519809 Msa0613690:CDS 55.0%
GGCACCCAATGGAGATGCAT+GGG + chr4_2:62519791-62519810 Msa0613690:CDS 55.0%
GATGAGGTTCTTCTCGTCGG+AGG + chr4_2:62520582-62520601 Msa0613690:CDS 55.0%
CCCATTGCAACAGCCTCATC+AGG - chr4_2:62520681-62520700 None:intergenic 55.0%
TGCAATGGGAGCAGCTCTTC+AGG + chr4_2:62520692-62520711 Msa0613690:CDS 55.0%
GCAATGGGAGCAGCTCTTCA+GGG + chr4_2:62520693-62520712 Msa0613690:CDS 55.0%
CTTCAGGGTGGTATTCTCCG+TGG + chr4_2:62520708-62520727 Msa0613690:CDS 55.0%
! GTGGGTATCAAGGTGCTCCA+AGG + chr4_2:62521516-62521535 Msa0613690:CDS 55.0%
! GGGTATCAAGGTGCTCCAAG+GGG + chr4_2:62521518-62521537 Msa0613690:CDS 55.0%
CTGAGAGTCCTCCTGATGAG+CGG - chr4_2:62521716-62521735 None:intergenic 55.0%
ATGTCAGGTGGGTCAAGTGG+AGG + chr4_2:62522014-62522033 Msa0613690:CDS 55.0%
AGTGGAGGTTCCTCTGATGG+AGG + chr4_2:62522029-62522048 Msa0613690:CDS 55.0%
TCCTCTGATGGAGGTTCTCC+AGG + chr4_2:62522038-62522057 Msa0613690:CDS 55.0%
ACCTGGAGAACCTCCATCAG+AGG - chr4_2:62522042-62522061 None:intergenic 55.0%
TCTGATGGAGGTTCTCCAGG+TGG + chr4_2:62522041-62522060 Msa0613690:CDS 55.0%
! TTCTCCAGGTGGTGGTGAAC+AGG + chr4_2:62522052-62522071 Msa0613690:CDS 55.0%
TGGTACACCTGCCAAGCGTC+AGG + chr4_2:62519656-62519675 Msa0613690:CDS 60.0%
GTTACAGCCTGACGCTTGGC+AGG - chr4_2:62519666-62519685 None:intergenic 60.0%
ATGGGAGCAGCTCTTCAGGG+TGG + chr4_2:62520696-62520715 Msa0613690:CDS 60.0%
! GCTCCAAGGGGAGCGTGAAA+TGG + chr4_2:62521530-62521549 Msa0613690:CDS 60.0%
CAGCCATTTCACGCTCCCCT+TGG - chr4_2:62521536-62521555 None:intergenic 60.0%
GGGCAGGAGGAATGCCAACA+AGG - chr4_2:62521587-62521606 None:intergenic 60.0%
TGAGGCAAACCTCTTGGGGC+AGG - chr4_2:62521603-62521622 None:intergenic 60.0%
GAGTCCTCCTGATGAGCGGA+TGG - chr4_2:62521712-62521731 None:intergenic 60.0%
GATGGAGGTTCTCCAGGTGG+TGG + chr4_2:62522044-62522063 Msa0613690:CDS 60.0%
! TGGTGGTGAACAGGCTCCAG+AGG + chr4_2:62522061-62522080 Msa0613690:CDS 60.0%
! GAGAGCACGGCGCAAGAAGG+CGG - chr4_2:62518581-62518600 None:intergenic 65.0%
CAAGATCGCGGCGGAGAGCA+CGG - chr4_2:62518594-62518613 None:intergenic 65.0%
GGCATTCCTCCTGCCCCAAG+AGG + chr4_2:62521591-62521610 Msa0613690:CDS 65.0%
GGCAAACCTCTTGGGGCAGG+AGG - chr4_2:62521600-62521619 None:intergenic 65.0%
GGAGCCTGTTCACCACCACC+TGG - chr4_2:62522059-62522078 None:intergenic 65.0%
! GCGGAGAGCACGGCGCAAGA+AGG - chr4_2:62518584-62518603 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 62518431 62522455 62518431 ID=Msa0613690;Name=Msa0613690
chr4_2 mRNA 62518431 62522455 62518431 ID=Msa0613690-mRNA-1;Parent=Msa0613690;Name=Msa0613690-mRNA-1;_AED=0.04;_eAED=0.04;_QI=123|1|1|1|0.83|0.71|7|346|675
chr4_2 exon 62518431 62518540 62518431 ID=Msa0613690-mRNA-1:exon:17234;Parent=Msa0613690-mRNA-1
chr4_2 exon 62518561 62518642 62518561 ID=Msa0613690-mRNA-1:exon:17235;Parent=Msa0613690-mRNA-1
chr4_2 exon 62519257 62519321 62519257 ID=Msa0613690-mRNA-1:exon:17236;Parent=Msa0613690-mRNA-1
chr4_2 exon 62519410 62519488 62519410 ID=Msa0613690-mRNA-1:exon:17237;Parent=Msa0613690-mRNA-1
chr4_2 exon 62519573 62520139 62519573 ID=Msa0613690-mRNA-1:exon:17238;Parent=Msa0613690-mRNA-1
chr4_2 exon 62520231 62520851 62520231 ID=Msa0613690-mRNA-1:exon:17239;Parent=Msa0613690-mRNA-1
chr4_2 exon 62521483 62522455 62521483 ID=Msa0613690-mRNA-1:exon:17240;Parent=Msa0613690-mRNA-1
chr4_2 five_prime_UTR 62518431 62518540 62518431 ID=Msa0613690-mRNA-1:five_prime_utr;Parent=Msa0613690-mRNA-1
chr4_2 five_prime_UTR 62518561 62518573 62518561 ID=Msa0613690-mRNA-1:five_prime_utr;Parent=Msa0613690-mRNA-1
chr4_2 CDS 62518574 62518642 62518574 ID=Msa0613690-mRNA-1:cds;Parent=Msa0613690-mRNA-1
chr4_2 CDS 62519257 62519321 62519257 ID=Msa0613690-mRNA-1:cds;Parent=Msa0613690-mRNA-1
chr4_2 CDS 62519410 62519488 62519410 ID=Msa0613690-mRNA-1:cds;Parent=Msa0613690-mRNA-1
chr4_2 CDS 62519573 62520139 62519573 ID=Msa0613690-mRNA-1:cds;Parent=Msa0613690-mRNA-1
chr4_2 CDS 62520231 62520851 62520231 ID=Msa0613690-mRNA-1:cds;Parent=Msa0613690-mRNA-1
chr4_2 CDS 62521483 62522109 62521483 ID=Msa0613690-mRNA-1:cds;Parent=Msa0613690-mRNA-1
chr4_2 three_prime_UTR 62522110 62522455 62522110 ID=Msa0613690-mRNA-1:three_prime_utr;Parent=Msa0613690-mRNA-1
Gene Sequence

>Msa0613690

ATGGCCGCCTTCTTGCGCCGTGCTCTCCGCCGCGATCTTGCTTCTTCCTCTGTCTCTGCCTTTCGATCGTTGACAGGCAGCACTAAGCCATCATATGCAGCTCAAAAGTGGGCAAGTTTGGCTCGACCTTTCAGTTCTAGGCCTGCTGGTAGTGATGTTATTGGAATTGATTTGGGGACTACCAATTCATGTGTTTCTTTAATGGAGGGAAAGAATCCTAAAGTTATTGAGAATTCTGAAGGAGCTCGGACAACACCATCAGTGGTTGCCTTCAACCAGAAAGGAGAGCTGCTTGTTGGTACACCTGCCAAGCGTCAGGCTGTAACCAACCCAACAAATACTCTTTTTGGCACCAAACGTTTGATTGGTAGGCGCTTTGATGATCCGCAAACACAAAAGGAGATGAAAATGGTACCCTATAAGATTGTCAAGGCACCCAATGGAGATGCATGGGTTGAAATCAATAAGCAGCAATATTCTCCCAGCCAAATTGGTGCTTTTGTTCTTACTAAGATGAAGGAAACTGCTGAGGCATACCTTGGAAAAACAATTTCTAAAGCTGTAGTTACTGTTCCAGCTTACTTCAATGATGCTCAGAGGCAGGCAACAAAAGATGCTGGTAGAATTGCCGGTCTTGAAGTGCTGAGAATTATCAATGAGCCCACTGCAGCTGCACTTTCATATGGGATGAACAGCAAAGAGGGGCTCATTGCTGTTTTTGATCTCGGAGGTGGAACATTTGATGTGTCCATTTTAGAAATTTCAAACGGTGTATTTGAGGTGAAAGCTACCAATGGTGACACTTTCTTGGGAGGAGAAGATTTTGATAATGCTTTGTTGGACTTTCTAGTAAGTGAATTCAAGAGAACTGATAGTATTGATCTTGCAAAGGATAAGCTTGCGTTGCAGAGGCTTCGAGAAGCTGCTGAGAAAGCAAAAATAGAACTCTCTTCAACTTCACAAACTGAAATAAACCTTCCTTTCATCACTGCTGATGCATCCGGTGCAAAGCATTTGAATATCACGTTGACTAGATCGAAGTTTGAGGCTTTGGTAAATAACCTGATTGAAAGGACAAAGGCACCCTGTAAGAGCTGCTTGAAAGATGCCAACATATCTATCAAGGATGTTGATGAGGTTCTTCTCGTCGGAGGGATGACTCGTGTACCTAAAGTGCAGGAGGTGGTTTCAGAGATCTTTGGAAAGAGTCCTAGCAAAGGAGTAAATCCTGATGAGGCTGTTGCAATGGGAGCAGCTCTTCAGGGTGGTATTCTCCGTGGTGATGTTAAAGAGCTGCTACTCCTAGATGTCACTCCTCTATCCCTGGGTATTGAGACTTTGGGTGGTATCTTTACAAGATTGATCTCCCGCAACACAACAATTCCTACAAAGAAGAGTCAGGTGTTTTCGACAGCAGCTGACAATCAGACTCAAGTGGGTATCAAGGTGCTCCAAGGGGAGCGTGAAATGGCTGCAGACAACAAGAGTCTTGGAGAATTTGACCTTGTTGGCATTCCTCCTGCCCCAAGAGGTTTGCCTCAGATTGAAGTCACATTTGACATAGATGCCAATGGGATTGTTACTGTCTCTGCCAAAGACAAATCCACTGGAAAAGAACAACAGATTACCATCCGCTCATCAGGAGGACTCTCAGATGATGAAATTAATAATATGGTCAAAGAAGCTGAGTTGCATGCTCAGAGAGATCAGGAAAGGAAAGCACTTATTGATATCAAGAATAGTGCCGACACATCAATCTACTCGATTGAAAAGAGTTTGAGCGAGTATAGGGAAAAGATTCCTAGTGAGGTTGCGAAGGAAATTGAAGATGCGGTCTCAGATTTGAGAACGGCTATGGCAGGAGAAAGTGTTGATGAAATTAAGACAAAACTTGACGCTGCAAACAAAGCCGTGTCAAAGATTGGTCAGCATATGTCAGGTGGGTCAAGTGGAGGTTCCTCTGATGGAGGTTCTCCAGGTGGTGGTGAACAGGCTCCAGAGGCAGAGTATGAAGAGGTCAAGAAGTGA
Protein sequence

>Msa0613690

MAAFLRRALRRDLASSSVSAFRSLTGSTKPSYAAQKWASLARPFSSRPAGSDVIGIDLGTTNSCVSLMEGKNPKVIENSEGARTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRRFDDPQTQKEMKMVPYKIVKAPNGDAWVEINKQQYSPSQIGAFVLTKMKETAEAYLGKTISKAVVTVPAYFNDAQRQATKDAGRIAGLEVLRIINEPTAAALSYGMNSKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVSEFKRTDSIDLAKDKLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFEALVNNLIERTKAPCKSCLKDANISIKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVAMGAALQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLISRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNKSLGEFDLVGIPPAPRGLPQIEVTFDIDANGIVTVSAKDKSTGKEQQITIRSSGGLSDDEINNMVKEAELHAQRDQERKALIDIKNSADTSIYSIEKSLSEYREKIPSEVAKEIEDAVSDLRTAMAGESVDEIKTKLDAANKAVSKIGQHMSGGSSGGSSDGGSPGGGEQAPEAEYEEVKK*