AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0638370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0638370 MtrunA17_Chr4g0049501 98.815 675 8 0 1 675 1 675 0.0 1352
Msa0638370 MtrunA17_Chr2g0279901 90.342 673 63 2 3 675 6 676 0.0 1216
Msa0638370 MtrunA17_Chr2g0277021 54.743 643 286 3 27 666 45 685 0.0 696
Msa0638370 MtrunA17_Chr8g0388761 53.448 580 244 10 53 614 38 609 0.0 581
Msa0638370 MtrunA17_Chr8g0388671 53.448 580 244 10 53 614 38 609 0.0 579
Msa0638370 MtrunA17_Chr4g0031301 49.298 641 283 12 54 659 10 643 0.0 570
Msa0638370 MtrunA17_Chr4g0031321 52.422 578 249 9 54 612 10 580 0.0 568
Msa0638370 MtrunA17_Chr7g0223291 49.383 648 291 11 54 673 10 648 0.0 567
Msa0638370 MtrunA17_Chr7g0262821 49.373 638 287 11 54 662 10 640 0.0 567
Msa0638370 MtrunA17_Chr7g0223181 52.249 578 250 9 54 612 10 580 0.0 567
Msa0638370 MtrunA17_Chr4g0073741 50.081 621 281 10 54 652 9 622 0.0 567
Msa0638370 MtrunA17_Chr2g0284681 45.349 602 292 13 51 630 6 592 9.36e-165 486
Msa0638370 MtrunA17_Chr7g0223721 46.769 588 285 13 46 613 2 581 3.31e-162 480
Msa0638370 MtrunA17_Chr7g0233311 46.299 581 281 12 54 612 10 581 4.14e-161 477
Msa0638370 MtrunA17_Chr7g0223781 44.020 602 305 11 54 629 10 605 6.48e-161 476
Msa0638370 MtrunA17_Chr7g0223711 45.552 562 276 10 54 595 10 561 2.14e-160 475
Msa0638370 MtrunA17_Chr2g0298851 44.828 580 292 12 54 613 10 581 6.95e-159 471
Msa0638370 MtrunA17_Chr7g0221661 45.675 578 290 11 54 613 10 581 2.20e-157 468
Msa0638370 MtrunA17_Chr7g0223851 45.189 582 287 14 54 613 19 590 7.61e-157 466
Msa0638370 MtrunA17_Chr8g0350731 44.538 595 291 13 17 595 17 588 8.23e-157 467
Msa0638370 MtrunA17_Chr7g0223751 45.161 558 283 11 54 595 10 560 4.59e-156 464
Msa0638370 MtrunA17_Chr6g0462601 44.345 557 289 9 54 595 10 560 5.63e-156 464
Msa0638370 MtrunA17_Chr4g0040931 45.876 582 283 14 54 613 10 581 3.03e-155 462
Msa0638370 MtrunA17_Chr2g0293581 44.538 595 294 13 54 626 11 591 4.80e-154 459
Msa0638370 MtrunA17_Chr7g0223621 43.486 591 309 12 54 626 10 593 6.10e-154 459
Msa0638370 MtrunA17_Chr5g0427901 42.810 612 292 14 54 634 10 594 3.01e-153 457
Msa0638370 MtrunA17_Chr7g0223731 44.624 558 286 10 54 595 10 560 7.12e-152 453
Msa0638370 MtrunA17_Chr7g0225671 46.359 563 269 15 52 593 15 565 1.00e-151 453
Msa0638370 MtrunA17_Chr7g0223741 44.821 560 283 10 54 595 10 561 1.01e-150 450
Msa0638370 MtrunA17_Chr7g0223701 44.092 567 285 13 54 595 10 569 3.28e-149 447
Msa0638370 MtrunA17_Chr7g0223031 45.161 558 283 11 54 595 10 560 3.67e-149 446
Msa0638370 MtrunA17_Chr2g0287631 45.455 583 279 12 54 606 10 583 3.90e-149 446
Msa0638370 MtrunA17_Chr7g0223801 43.067 613 320 15 54 647 10 612 8.43e-149 445
Msa0638370 MtrunA17_Chr6g0462681 43.627 557 293 9 54 595 10 560 2.56e-148 446
Msa0638370 MtrunA17_Chr2g0296391 45.180 529 265 9 54 564 10 531 4.49e-148 441
Msa0638370 MtrunA17_Chr2g0298861 44.167 600 295 17 46 613 2 593 6.75e-148 443
Msa0638370 MtrunA17_Chr7g0248131 44.029 561 288 13 54 595 10 563 6.11e-145 436
Msa0638370 MtrunA17_Chr7g0223631 43.063 555 285 12 54 595 10 546 5.03e-144 432
Msa0638370 MtrunA17_Chr7g0233301 44.563 561 249 14 54 593 10 529 1.54e-142 428
Msa0638370 MtrunA17_Chr7g0223821 46.857 525 244 13 40 544 1 510 4.08e-142 431
Msa0638370 MtrunA17_Chr6g0462641 40.925 562 306 9 54 595 10 565 8.10e-142 429
Msa0638370 MtrunA17_Chr6g0462771 41.459 562 303 9 54 595 10 565 1.03e-141 428
Msa0638370 MtrunA17_Chr6g0462711 41.509 583 310 12 54 612 11 586 2.43e-141 428
Msa0638370 MtrunA17_Chr7g0217971 43.604 555 268 13 54 593 10 534 6.76e-140 422
Msa0638370 MtrunA17_Chr7g0248151 43.828 559 290 12 54 595 10 561 1.16e-138 419
Msa0638370 MtrunA17_Chr4g0012541 42.096 582 296 14 54 613 10 572 1.60e-136 414
Msa0638370 MtrunA17_Chr7g0223831 42.246 561 264 17 54 593 10 531 1.71e-129 395
Msa0638370 MtrunA17_Chr2g0293601 43.478 506 232 8 54 544 10 476 2.20e-129 391
Msa0638370 MtrunA17_Chr7g0223541 44.008 509 262 10 105 595 15 518 1.97e-128 392
Msa0638370 MtrunA17_Chr7g0228281 40.760 579 272 14 54 613 71 597 6.13e-128 392
Msa0638370 MtrunA17_Chr7g0215261 42.115 558 263 14 54 593 10 525 1.93e-127 389
Msa0638370 MtrunA17_Chr6g0462611 42.147 503 273 8 106 595 11 508 2.65e-126 387
Msa0638370 MtrunA17_Chr8g0390821 37.666 677 324 22 40 645 1 650 9.80e-124 382
Msa0638370 MtrunA17_Chr7g0223681 43.949 471 244 8 137 593 5 469 7.25e-121 370
Msa0638370 MtrunA17_Chr2g0331381 39.963 543 240 12 53 578 6 479 1.32e-119 365
Msa0638370 MtrunA17_Chr2g0299921 48.346 393 186 6 43 425 1019 1404 1.29e-104 350
Msa0638370 MtrunA17_Chr2g0299921 47.727 396 187 8 54 436 1414 1802 2.01e-95 323
Msa0638370 MtrunA17_Chr2g0293561 44.792 384 191 7 54 423 10 386 8.60e-104 322
Msa0638370 MtrunA17_Chr2g0299791 46.875 384 187 6 54 427 1043 1419 2.97e-102 341
Msa0638370 MtrunA17_Chr6g0462861 36.313 537 307 12 54 577 10 524 2.13e-101 323
Msa0638370 MtrunA17_Chr2g0299851 46.842 380 189 5 54 425 1039 1413 1.29e-100 336
Msa0638370 MtrunA17_Chr2g0299821 45.407 381 187 7 54 420 10 383 5.76e-98 309
Msa0638370 MtrunA17_Chr2g0299821 50.562 89 36 1 493 573 396 484 9.82e-18 86.7
Msa0638370 MtrunA17_Chr2g0299881 43.508 439 210 12 10 427 998 1419 3.36e-95 321
Msa0638370 MtrunA17_Chr1g0151991 50.182 275 125 5 54 317 10 283 5.65e-86 271
Msa0638370 MtrunA17_Chr7g0245521 48.864 264 123 4 54 306 10 272 3.92e-79 253
Msa0638370 MtrunA17_Chr1g0166551 33.737 578 251 19 52 613 4 465 2.55e-76 253
Msa0638370 MtrunA17_Chr2g0293271 35.616 438 198 8 65 491 45 409 1.42e-72 240
Msa0638370 MtrunA17_Chr5g0394391 29.358 545 313 12 29 529 5 521 1.40e-69 237
Msa0638370 MtrunA17_Chr3g0098761 33.990 406 251 6 53 446 3 403 1.17e-67 236
Msa0638370 MtrunA17_Chr4g0004331 32.598 408 258 5 53 448 3 405 3.76e-66 233
Msa0638370 MtrunA17_Chr5g0444001 31.640 433 270 7 53 466 3 428 4.15e-64 221
Msa0638370 MtrunA17_Chr2g0331901 31.683 404 259 6 53 444 3 401 3.12e-63 225
Msa0638370 MtrunA17_Chr7g0245531 44.922 256 135 4 343 593 2 256 8.05e-63 211
Msa0638370 MtrunA17_Chr7g0223671 52.151 186 80 2 119 295 10 195 1.39e-58 196
Msa0638370 MtrunA17_Chr1g0188601 50.532 188 84 2 135 313 1 188 1.59e-55 187
Msa0638370 MtrunA17_Chr6g0462791 51.807 166 76 1 156 317 10 175 2.30e-51 176
Msa0638370 MtrunA17_Chr6g0462751 33.333 357 159 11 107 446 9 303 4.23e-51 180
Msa0638370 MtrunA17_Chr6g0462631 37.500 304 136 6 156 450 39 297 7.60e-51 178
Msa0638370 MtrunA17_Chr4g0060241 29.771 524 316 15 38 531 5 506 1.91e-50 184
Msa0638370 MtrunA17_Chr1g0152001 41.313 259 138 9 364 613 12 265 2.38e-49 175
Msa0638370 MtrunA17_Chr4g0064621 30.361 527 324 12 48 540 135 652 9.89e-49 182
Msa0638370 MtrunA17_Chr7g0223761 34.758 351 166 9 275 613 3 302 1.69e-47 171
Msa0638370 MtrunA17_Chr4g0046881 51.634 153 63 2 156 303 2 148 1.30e-45 159
Msa0638370 MtrunA17_Chr7g0223771 52.667 150 62 2 139 279 4 153 1.09e-43 154
Msa0638370 MtrunA17_Chr1g0188611 43.600 250 124 7 365 602 6 250 8.72e-43 156
Msa0638370 MtrunA17_Chr5g0442171 31.231 333 198 7 209 523 1 320 3.33e-41 152
Msa0638370 MtrunA17_Chr3g0120101 29.017 417 263 11 40 430 15 424 4.47e-38 151
Msa0638370 MtrunA17_Chr7g0223861 51.145 131 55 3 121 242 4 134 1.14e-35 131
Msa0638370 MtrunA17_Chr5g0394221 31.381 239 159 5 339 573 71 308 5.96e-32 127
Msa0638370 MtrunA17_Chr7g0245541 46.099 141 74 2 454 593 4 143 6.88e-31 120
Msa0638370 MtrunA17_Chr6g0462701 40.909 154 62 3 156 304 39 168 2.32e-29 114
Msa0638370 MtrunA17_Chr6g0462691 45.588 136 69 2 364 494 5 140 7.36e-29 112
Msa0638370 MtrunA17_Chr4g0046871 49.495 99 46 2 377 471 9 107 3.22e-23 94.7
Msa0638370 MtrunA17_Chr4g0064651 45.652 92 50 0 432 523 30 121 4.03e-19 84.0
Msa0638370 MtrunA17_Chr5g0394231 29.493 217 95 6 119 326 7 174 1.03e-18 84.7
Msa0638370 MtrunA17_Chr6g0481391 32.520 123 75 2 80 198 13 131 1.22e-17 79.7
Msa0638370 MtrunA17_Chr2g0284661 52.381 84 36 2 404 483 60 143 1.31e-17 80.1
Msa0638370 MtrunA17_Chr6g0481381 52.703 74 30 1 215 283 1 74 2.77e-15 74.7
Msa0638370 MtrunA17_Chr7g0223691 56.061 66 26 2 54 117 10 74 2.35e-14 68.6
Msa0638370 MtrunA17_Chr6g0462621 50.000 64 31 1 54 117 10 72 1.08e-13 66.6
Msa0638370 MtrunA17_Chr1g0188591 50.000 66 30 2 54 117 10 74 3.29e-13 65.9
Msa0638370 MtrunA17_Chr2g0299941 52.113 71 31 1 420 487 7 77 1.34e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0638370 AT5G09590.1 83.505 679 107 2 2 675 4 682 0.0 1142
Msa0638370 AT4G37910.1 82.169 673 116 2 3 672 5 676 0.0 1090
Msa0638370 AT4G37910.2 82.169 673 116 2 3 672 5 676 0.0 1090
Msa0638370 AT4G24280.1 57.877 603 247 4 47 645 74 673 0.0 693
Msa0638370 AT5G49910.1 56.774 620 261 4 47 663 74 689 0.0 692
Msa0638370 AT5G42020.1 54.301 558 232 9 53 595 37 586 0.0 582
Msa0638370 AT5G42020.3 54.301 558 232 9 53 595 42 591 0.0 581
Msa0638370 AT5G28540.1 54.301 558 232 9 53 595 37 586 0.0 579
Msa0638370 AT5G02500.1 51.171 598 267 10 54 631 10 602 0.0 569
Msa0638370 AT3G12580.1 49.525 632 283 12 54 661 10 629 0.0 566
Msa0638370 AT3G09440.1 51.903 578 252 9 54 612 10 580 0.0 562
Msa0638370 AT3G09440.4 51.903 578 252 9 54 612 10 580 0.0 562
Msa0638370 AT3G09440.2 51.903 578 252 9 54 612 10 580 0.0 562
Msa0638370 AT3G09440.3 51.903 578 252 9 54 612 10 580 0.0 562
Msa0638370 AT1G16030.1 48.896 634 288 11 54 663 9 630 0.0 562
Msa0638370 AT1G56410.1 49.431 615 284 10 54 648 10 617 0.0 560
Msa0638370 AT5G02490.1 48.860 614 285 10 54 643 10 618 0.0 560
Msa0638370 AT1G09080.2 52.900 569 245 10 53 607 42 601 0.0 555
Msa0638370 AT1G09080.1 52.900 569 245 10 53 607 52 611 0.0 555
Msa0638370 AT5G42020.2 55.967 486 191 9 53 523 37 514 4.23e-177 518
Msa0638370 AT5G02500.2 50.895 391 177 6 54 434 10 395 3.44e-124 379
Msa0638370 AT1G79930.2 32.274 409 260 5 53 449 3 406 5.89e-67 235
Msa0638370 AT1G79930.1 32.274 409 260 5 53 449 3 406 8.56e-67 235
Msa0638370 AT1G79920.3 32.029 409 261 5 53 449 3 406 1.02e-66 233
Msa0638370 AT1G79920.2 32.029 409 261 5 53 449 3 406 1.02e-66 233
Msa0638370 AT1G79920.4 32.029 409 261 5 53 449 3 406 1.02e-66 233
Msa0638370 AT1G79920.1 32.029 409 261 5 53 449 3 406 1.30e-66 233
Msa0638370 AT2G32120.1 30.502 518 304 12 45 531 21 513 1.05e-65 227
Msa0638370 AT2G32120.2 30.502 518 304 12 45 531 21 513 1.05e-65 227
Msa0638370 AT1G11660.4 31.220 410 264 5 53 449 3 407 7.20e-62 220
Msa0638370 AT1G11660.3 31.220 410 264 5 53 449 3 407 7.20e-62 220
Msa0638370 AT1G11660.1 31.220 410 264 5 53 449 3 407 7.20e-62 220
Msa0638370 AT1G11660.2 31.467 375 239 5 88 449 1 370 9.46e-55 200
Msa0638370 AT4G16660.1 27.571 457 291 11 48 469 21 472 2.00e-42 165
Msa0638370 AT4G16660.2 27.571 457 291 11 48 469 45 496 2.26e-42 165
Msa0638370 AT4G32208.1 69.444 108 32 1 569 675 46 153 1.34e-35 132

Find 197 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATTCATGTGTTTCTTTAA+TGG 0.139612 4_3:-33817437 Msa0638370:CDS
CAACAAGCAGCTCTCCTTTC+TGG 0.152574 4_3:+33817260 None:intergenic
CAAGTTTGGCTCGACCTTTC+AGG 0.154885 4_3:-33817595 Msa0638370:intron
ACCGTTTGAAATTTCTAAAA+TGG 0.216877 4_3:+33816787 None:intergenic
TGCAATGGGAGCAGCTCTTC+AGG 0.222059 4_3:-33816203 Msa0638370:CDS
GGGTGCCTTGACAATCTTAT+AGG 0.230055 4_3:+33817120 None:intergenic
TTTGGCTGTGAAGTGAAATT+AGG 0.232878 4_3:+33818361 None:intergenic
TCAGAATTCTCAATAACTTT+AGG 0.250981 4_3:+33817319 None:intergenic
ATCTTTCAAGCAGCTCTTAC+AGG 0.256743 4_3:+33816360 None:intergenic
TAAGAACAAAAGCACCAATT+TGG 0.281100 4_3:+33817050 None:intergenic
GTGAAGTGAAATTAGGGTTT+AGG 0.284191 4_3:+33818368 None:intergenic
AGCTCAAAAGTGGGCAAGTT+TGG 0.290535 4_3:-33817609 Msa0638370:CDS
GAAATTAGGGTTTAGGGTTT+TGG 0.297029 4_3:+33818375 None:intergenic
ATTACCTGACTCTTCTTTGT+AGG 0.299624 4_3:+33816061 None:intergenic
TGTGCGGTTGTAATAATATA+GGG 0.304897 4_3:+33818421 None:intergenic
GAAACCACCTCCTGCACTTT+AGG 0.305254 4_3:+33816277 None:intergenic
TAGATCGAAGTTTGAGGCTT+TGG 0.315791 4_3:-33816413 Msa0638370:CDS
AAAGAGTTTGAGCGAGTATA+GGG 0.317690 4_3:-33815069 Msa0638370:CDS
TGATGTTATTGGAATTGATT+TGG 0.319512 4_3:-33817467 Msa0638370:CDS
TGAAGTGAAATTAGGGTTTA+GGG 0.320670 4_3:+33818369 None:intergenic
TACCAATGGTGACACTTTCT+TGG 0.320696 4_3:-33816656 Msa0638370:CDS
ATGTGCGGTTGTAATAATAT+AGG 0.321543 4_3:+33818420 None:intergenic
TCCAACAGTACGACAAAATA+AGG 0.346294 4_3:+33814701 None:intergenic
AAAAGAGTTTGAGCGAGTAT+AGG 0.348496 4_3:-33815070 Msa0638370:CDS
ACTGCAGCTGCACTTTCATA+TGG 0.352369 4_3:-33816872 Msa0638370:CDS
CAATCTGAGGCAAACCTCTT+GGG 0.354482 4_3:+33815315 None:intergenic
ATCCCTGGGTATTGAGACTT+TGG 0.357413 4_3:-33816125 Msa0638370:CDS
CTTGGAGAATTTGACCTTGT+TGG 0.357711 4_3:-33815350 Msa0638370:CDS
AGATGATGAAATTAATAATA+TGG 0.357883 4_3:-33815186 Msa0638370:CDS
AAAGATGCTGGTAGAATTGC+CGG 0.362237 4_3:-33816926 Msa0638370:CDS
TCCTCTGATGGAGGTTCTCC+AGG 0.365670 4_3:-33814882 Msa0638370:CDS
GAGGTGGTTTCAGAGATCTT+TGG 0.369528 4_3:-33816265 Msa0638370:CDS
CAGTATTCTCCCAGCCAAAT+TGG 0.369640 4_3:-33817064 Msa0638370:CDS
AACACAAAAGGAGATGAAAA+TGG 0.372682 4_3:-33817146 Msa0638370:CDS
GATGTTATTGGAATTGATTT+GGG 0.373282 4_3:-33817466 Msa0638370:CDS
TTCTCCAGGTGGTGGTGAAC+AGG 0.375092 4_3:-33814868 Msa0638370:CDS
CCTGCTGGTAGTGATGTTAT+TGG 0.376880 4_3:-33817478 Msa0638370:CDS
GGTGCCTTGACAATCTTATA+GGG 0.378876 4_3:+33817121 None:intergenic
TTGGCTGTGAAGTGAAATTA+GGG 0.383544 4_3:+33818362 None:intergenic
TCCCTGGGTATTGAGACTTT+GGG 0.389902 4_3:-33816124 Msa0638370:CDS
GTGCCTTTGTCCTTTCAATC+AGG 0.391952 4_3:+33816383 None:intergenic
CAGCTCTCCTTTCTGGTTGA+AGG 0.397732 4_3:+33817267 None:intergenic
CATTAAAGAAACACATGAAT+TGG 0.405929 4_3:+33817438 None:intergenic
CTCTATTCTCCGATTCACTA+TGG 0.409418 4_3:-33818308 Msa0638370:exon
ACCTCTTCATACTCTGCCTC+TGG 0.409681 4_3:+33814843 None:intergenic
TGTAGGAATTGTTGTGTTGC+GGG 0.416658 4_3:+33816078 None:intergenic
CAGCCATTTCACGCTCCCCT+TGG 0.422244 4_3:+33815387 None:intergenic
CAGATTACCATCCGCTCATC+AGG 0.424767 4_3:-33815218 Msa0638370:CDS
GGGATAGAGGAGTGACATCT+AGG 0.427451 4_3:+33816143 None:intergenic
CAAGATCGCGGCGGAGAGCA+CGG 0.429764 4_3:+33818272 None:intergenic
AGATGTCACTCCTCTATCCC+TGG 0.430112 4_3:-33816140 Msa0638370:CDS
ACCAATGGTGACACTTTCTT+GGG 0.432955 4_3:-33816655 Msa0638370:CDS
TCAATCTGAGGCAAACCTCT+TGG 0.435495 4_3:+33815314 None:intergenic
GCTCCAAGGGGAGCGTGAAA+TGG 0.435720 4_3:-33815390 Msa0638370:CDS
CCCATTGCAACAGCCTCATC+AGG 0.435835 4_3:+33816217 None:intergenic
TTTGGCACCAAACGTTTGAT+TGG 0.438874 4_3:-33817190 Msa0638370:CDS
GCACCAAACGTTTGATTGGT+AGG 0.443834 4_3:-33817186 Msa0638370:CDS
AACAAAAGCACCAATTTGGC+TGG 0.450750 4_3:+33817054 None:intergenic
AACAAAGCCGTGTCAAAGAT+TGG 0.451841 4_3:-33814936 Msa0638370:CDS
CTCTGTCTCTGCCTTTCGAT+CGG 0.453056 4_3:-33818242 Msa0638370:intron
TTCATCACTGCTGATGCATC+CGG 0.456355 4_3:-33816463 Msa0638370:CDS
TTCAACCCATGCATCTCCAT+TGG 0.460739 4_3:+33817099 None:intergenic
TCAACCCATGCATCTCCATT+GGG 0.462137 4_3:+33817100 None:intergenic
GCGCCTACCAATCAAACGTT+TGG 0.472555 4_3:+33817183 None:intergenic
GTTAAACTTTCGTCGGAGAA+AGG 0.475478 4_3:-33814532 Msa0638370:three_prime_UTR
ATTTCCTTCGCAACCTCACT+AGG 0.475574 4_3:+33815038 None:intergenic
CAGAAAGGAGAGCTGCTTGT+TGG 0.476199 4_3:-33817259 Msa0638370:CDS
GTTGACTAGATCGAAGTTTG+AGG 0.481396 4_3:-33816419 Msa0638370:CDS
AACATCCTTGATAGATATGT+TGG 0.482621 4_3:+33816336 None:intergenic
TGGTACACCTGCCAAGCGTC+AGG 0.482660 4_3:-33817239 Msa0638370:CDS
AATTTCAAACGGTGTATTTG+AGG 0.485239 4_3:-33816777 Msa0638370:intron
TCAAGTGGAGGTTCCTCTGA+TGG 0.485714 4_3:-33814894 Msa0638370:CDS
GTCTCAATACCCAGGGATAG+AGG 0.485922 4_3:+33816130 None:intergenic
TACTACAGTTCTAGGCCTGC+TGG 0.490672 4_3:-33817493 Msa0638370:intron
CTGCAGCTGCACTTTCATAT+GGG 0.491179 4_3:-33816871 Msa0638370:CDS
GCAATGGGAGCAGCTCTTCA+GGG 0.497054 4_3:-33816202 Msa0638370:CDS
GTTACAGCCTGACGCTTGGC+AGG 0.501358 4_3:+33817232 None:intergenic
CTTCAATGATGCTCAGAGGC+AGG 0.501906 4_3:-33816954 Msa0638370:CDS
TGCTGAAAGTTATCTACCAT+TGG 0.509311 4_3:-33814606 Msa0638370:three_prime_UTR
AGATGCCAACATATCTATCA+AGG 0.510131 4_3:-33816341 Msa0638370:CDS
TGATGATCCGCAAACACAAA+AGG 0.515016 4_3:-33817158 Msa0638370:CDS
TGAGGCAAACCTCTTGGGGC+AGG 0.516215 4_3:+33815320 None:intergenic
AATTCCTACAAAGAAGAGTC+AGG 0.516535 4_3:-33816065 Msa0638370:intron
AAGATTGGTCAGCATATGTC+AGG 0.517534 4_3:-33814921 Msa0638370:CDS
TGAGCATCATTGAAGTAAGC+TGG 0.518266 4_3:+33816962 None:intergenic
TGGTAAATAACCTGATTGAA+AGG 0.518643 4_3:-33816393 Msa0638370:CDS
GAGAGCACGGCGCAAGACGG+CGG 0.518714 4_3:+33818285 None:intergenic
TGTTTCTTTAATGGAGGGAA+AGG 0.519248 4_3:-33817428 Msa0638370:intron
TCAGGATTTACTCCTTTGCT+AGG 0.519309 4_3:+33816235 None:intergenic
GCGGAGAGCACGGCGCAAGA+CGG 0.519906 4_3:+33818282 None:intergenic
TCATGTGTTTCTTTAATGGA+GGG 0.521862 4_3:-33817433 Msa0638370:CDS
GCTGCAGACAACAAGAGTCT+TGG 0.523262 4_3:-33815368 Msa0638370:CDS
TTCATGTGTTTCTTTAATGG+AGG 0.523829 4_3:-33817434 Msa0638370:CDS
TCAGACTCAAGTGGGTATCA+AGG 0.524218 4_3:-33815414 Msa0638370:CDS
ATGAGGTTCTTCTCGTCGGA+GGG 0.525590 4_3:-33816312 Msa0638370:CDS
GAAACTGCTGAGGCATACCT+TGG 0.527311 4_3:-33817016 Msa0638370:CDS
CATCATATGCAGCTCAAAAG+TGG 0.528387 4_3:-33817619 Msa0638370:CDS
TCCTGATGAGGCTGTTGCAA+TGG 0.529665 4_3:-33816218 Msa0638370:CDS
GTTGCATGCTCAGAGAGATC+AGG 0.532569 4_3:-33815150 Msa0638370:CDS
GATTTGAGAACGGCTATAGC+AGG 0.533055 4_3:-33814999 Msa0638370:CDS
GACTCGTGTACCTAAAGTGC+AGG 0.535807 4_3:-33816287 Msa0638370:CDS
TTGTAGGAATTGTTGTGTTG+CGG 0.536039 4_3:+33816077 None:intergenic
CCTGATGAGGCTGTTGCAAT+GGG 0.536816 4_3:-33816217 Msa0638370:CDS
TATGGGATGAACAGCAAAGA+GGG 0.537258 4_3:-33816854 Msa0638370:CDS
TGGGTATCAAGGTGCTCCAA+GGG 0.538510 4_3:-33815403 Msa0638370:CDS
GATGTCACTCCTCTATCCCT+GGG 0.540459 4_3:-33816139 Msa0638370:CDS
GGCAAACCTCTTGGGGCAGG+AGG 0.540636 4_3:+33815323 None:intergenic
AAAGTTATTGAGAATTCTGA+AGG 0.542496 4_3:-33817316 Msa0638370:CDS
CTGGGTATTGAGACTTTGGG+TGG 0.543172 4_3:-33816121 Msa0638370:CDS
AATTCTCAGCACTTCAAGAC+CGG 0.543184 4_3:+33816907 None:intergenic
AGACGGCGGCCATAGTGAAT+CGG 0.544383 4_3:+33818299 None:intergenic
GTTGGTTACAGCCTGACGCT+TGG 0.547556 4_3:+33817228 None:intergenic
GGCACCCAATGGAGATGCAT+GGG 0.549734 4_3:-33817104 Msa0638370:CDS
GATGGAGGTTCTCCAGGTGG+TGG 0.550859 4_3:-33814876 Msa0638370:CDS
TTGAGAATTCTGAAGGAGCT+CGG 0.556650 4_3:-33817309 Msa0638370:CDS
GGAGCCTGTTCACCACCACC+TGG 0.557888 4_3:+33814864 None:intergenic
GTTGATGAGGTTCTTCTCGT+CGG 0.558124 4_3:-33816316 Msa0638370:CDS
ATCATATGCAGCTCAAAAGT+GGG 0.564862 4_3:-33817618 Msa0638370:CDS
CATATGTCAGGTGGGTCAAG+TGG 0.568288 4_3:-33814909 Msa0638370:CDS
TCTTTCAAGCAGCTCTTACA+GGG 0.569460 4_3:+33816361 None:intergenic
TCTGCCAAAGACAAATCCAC+TGG 0.570529 4_3:-33815251 Msa0638370:CDS
GTGGGTATCAAGGTGCTCCA+AGG 0.570815 4_3:-33815404 Msa0638370:CDS
GATGAGGTTCTTCTCGTCGG+AGG 0.572161 4_3:-33816313 Msa0638370:CDS
GATATTCAAATGCTTTGCAC+CGG 0.572709 4_3:+33816444 None:intergenic
GGCATTCCTCCTGCCCCAAG+AGG 0.573254 4_3:-33815329 Msa0638370:CDS
CGGTTGTAATAATATAGGGG+TGG 0.574813 4_3:+33818425 None:intergenic
AATCTGAGGCAAACCTCTTG+GGG 0.574961 4_3:+33815316 None:intergenic
ATATGAAAGTGCAGCTGCAG+TGG 0.575044 4_3:+33816874 None:intergenic
AGGCACCCAATGGAGATGCA+TGG 0.577576 4_3:-33817105 Msa0638370:CDS
AGGATAAGCTTGCGTTGCAG+AGG 0.578244 4_3:-33816555 Msa0638370:CDS
GGCAAAACAAAGCACCTGAA+AGG 0.578986 4_3:+33817581 None:intergenic
AGTTATCTACCATTGGTTGG+TGG 0.579146 4_3:-33814599 Msa0638370:three_prime_UTR
AGGCAGGCAACAAAAGATGC+TGG 0.579182 4_3:-33816938 Msa0638370:CDS
TCCCAAGAAAGTGTCACCAT+TGG 0.580142 4_3:+33816654 None:intergenic
GATTCCTAGTGAGGTTGCGA+AGG 0.581066 4_3:-33815042 Msa0638370:CDS
AATCGAGTAGATTGATGTGT+CGG 0.581607 4_3:+33815094 None:intergenic
TGGTGGTGAACAGGCTCCAG+AGG 0.582066 4_3:-33814859 Msa0638370:CDS
TGGTTGAAGGCAACCACTGA+TGG 0.582430 4_3:+33817280 None:intergenic
GTCAAGAAGTGAGACAACTT+AGG 0.582791 4_3:-33814822 Msa0638370:exon
AATGGTGACACTTTCTTGGG+AGG 0.584699 4_3:-33816652 Msa0638370:CDS
CATCAGCAGTGATGAAAGGA+AGG 0.584878 4_3:+33816470 None:intergenic
ACAAAAGCACCAATTTGGCT+GGG 0.595143 4_3:+33817055 None:intergenic
ATCTATCAAGGATGTTGATG+AGG 0.595284 4_3:-33816329 Msa0638370:CDS
TGTACCTAAAGTGCAGGAGG+TGG 0.596493 4_3:-33816281 Msa0638370:CDS
GTGGTTGCCTTCAACCAGAA+AGG 0.597350 4_3:-33817274 Msa0638370:CDS
GATGCATCAGCAGTGATGAA+AGG 0.598218 4_3:+33816466 None:intergenic
CGATCGAAAGGCAGAGACAG+AGG 0.598907 4_3:+33818243 None:intergenic
GTGCGGTTGTAATAATATAG+GGG 0.600163 4_3:+33818422 None:intergenic
AGCTCGGACAACACCATCAG+TGG 0.601686 4_3:-33817293 Msa0638370:CDS
TATGAAAGTGCAGCTGCAGT+GGG 0.601744 4_3:+33816875 None:intergenic
AAGATTGTCAAGGCACCCAA+TGG 0.601896 4_3:-33817115 Msa0638370:CDS
GAAAGTTATCTACCATTGGT+TGG 0.603185 4_3:-33814602 Msa0638370:three_prime_UTR
CACCCAAAGTCTCAATACCC+AGG 0.604506 4_3:+33816122 None:intergenic
ACCTGGAGAACCTCCATCAG+AGG 0.605516 4_3:+33814881 None:intergenic
CCAATAACATCACTACCAGC+AGG 0.608458 4_3:+33817478 None:intergenic
GGGCAGGAGGAATGCCAACA+AGG 0.608917 4_3:+33815336 None:intergenic
TGCGAAGGAAATTGAAGATG+CGG 0.608991 4_3:-33815027 Msa0638370:CDS
ATTGGTCAGCATATGTCAGG+TGG 0.609221 4_3:-33814918 Msa0638370:CDS
AGAGACAGTAACAATCCCAT+TGG 0.610713 4_3:+33815271 None:intergenic
GGTTGTAATAATATAGGGGT+GGG 0.611072 4_3:+33818426 None:intergenic
ATAGAGATTTACCGATCGAA+AGG 0.613056 4_3:+33818231 None:intergenic
GAGTCCTCCTGATGAGCGGA+TGG 0.614772 4_3:+33815211 None:intergenic
TTTCAGGTGAAAGCTACCAA+TGG 0.616098 4_3:-33816670 Msa0638370:intron
AGTGGAGGTTCCTCTGATGG+AGG 0.616462 4_3:-33814891 Msa0638370:CDS
ATATATTAACCACCAACCAA+TGG 0.616768 4_3:+33814590 None:intergenic
AGCTGACAATCAGACTCAAG+TGG 0.624033 4_3:-33815423 Msa0638370:CDS
ATGTCAGGTGGGTCAAGTGG+AGG 0.625917 4_3:-33814906 Msa0638370:CDS
ATGCTGACCAATCTTTGACA+CGG 0.628232 4_3:+33814929 None:intergenic
ACCCAAAGTCTCAATACCCA+GGG 0.628381 4_3:+33816123 None:intergenic
CTGAGAGTCCTCCTGATGAG+CGG 0.628649 4_3:+33815207 None:intergenic
TAGGGAAAAGATTCCTAGTG+AGG 0.630551 4_3:-33815051 Msa0638370:CDS
ATTACCATCCGCTCATCAGG+AGG 0.634993 4_3:-33815215 Msa0638370:CDS
CAGAGGAAGAAGCAAGATCG+CGG 0.635260 4_3:+33818260 None:intergenic
TGATAGTATTGATCTTGCAA+AGG 0.635285 4_3:-33816575 Msa0638370:CDS
TCTGATGGAGGTTCTCCAGG+TGG 0.636312 4_3:-33814879 Msa0638370:CDS
TCCAGAGGCAGAGTATGAAG+AGG 0.637119 4_3:-33814844 Msa0638370:CDS
TTGGTCAGCATATGTCAGGT+GGG 0.640684 4_3:-33814917 Msa0638370:CDS
GCTGACAATCAGACTCAAGT+GGG 0.641874 4_3:-33815422 Msa0638370:CDS
TAAGATGAAGGAAACTGCTG+AGG 0.643269 4_3:-33817026 Msa0638370:CDS
TCAAAAGTGACTTCAATCTG+AGG 0.643584 4_3:+33815302 None:intergenic
ATGTTATTGGAATTGATTTG+GGG 0.649149 4_3:-33817465 Msa0638370:CDS
ATGCTCAGAGAGATCAGGAA+AGG 0.649172 4_3:-33815145 Msa0638370:CDS
CAAAGGAGTAAATCCTGATG+AGG 0.650174 4_3:-33816230 Msa0638370:CDS
TGCGGTCTCAGATTTGAGAA+CGG 0.650827 4_3:-33815009 Msa0638370:CDS
TTTGGAAAGAGTCCTAGCAA+AGG 0.662243 4_3:-33816247 Msa0638370:CDS
TAACCTGATTGAAAGGACAA+AGG 0.662910 4_3:-33816386 Msa0638370:CDS
GGTACCCTATAAGATTGTCA+AGG 0.671230 4_3:-33817125 Msa0638370:CDS
TCGTGTACCTAAAGTGCAGG+AGG 0.674141 4_3:-33816284 Msa0638370:CDS
ATATGGGATGAACAGCAAAG+AGG 0.685497 4_3:-33816855 Msa0638370:CDS
CTTCAGGGTGGTATTCTCCG+TGG 0.686079 4_3:-33816187 Msa0638370:CDS
ATGGGATGAACAGCAAAGAG+GGG 0.688004 4_3:-33816853 Msa0638370:CDS
AGGAAGAAGCAAGATCGCGG+CGG 0.707753 4_3:+33818263 None:intergenic
GGGTATCAAGGTGCTCCAAG+GGG 0.712553 4_3:-33815402 Msa0638370:CDS
CTTACTTCAATGATGCTCAG+AGG 0.714640 4_3:-33816958 Msa0638370:CDS
ATGGGAGCAGCTCTTCAGGG+TGG 0.716807 4_3:-33816199 Msa0638370:CDS
GCAGCTCTTTAACATCACCA+CGG 0.761484 4_3:+33816170 None:intergenic
GAATGAGGTTATGAAATGTG+CGG 0.775661 4_3:+33818405 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTGTATTTTTTAGTAAA+AGG - chr4_3:33818173-33818192 Msa0638370:intron 10.0%
!! AAAATTATGAAAAATTAGAC+TGG + chr4_3:33815096-33815115 None:intergenic 15.0%
!!! TTTTTCTTAAAAACAGTTTT+TGG + chr4_3:33817101-33817120 None:intergenic 15.0%
!! ATTTAAAAATAAAATCTGCT+TGG - chr4_3:33817121-33817140 Msa0638370:CDS 15.0%
!!! TTCTGTTTTATTCAATAAAA+AGG - chr4_3:33817226-33817245 Msa0638370:CDS 15.0%
!! TACATTAAATAAATCTGAAT+AGG + chr4_3:33817406-33817425 None:intergenic 15.0%
!! AGATGATGAAATTAATAATA+TGG - chr4_3:33817713-33817732 Msa0638370:intron 15.0%
!!! ATATTATTTTGCAATTTGAT+TGG - chr4_3:33818328-33818347 Msa0638370:five_prime_UTR 15.0%
!! AATAATAACTGTTGATATCA+TGG - chr4_3:33815140-33815159 Msa0638370:CDS 20.0%
!!! TCCATTTTAGAAATTTCAAA+CGG - chr4_3:33816111-33816130 Msa0638370:CDS 20.0%
!! ACATAATTATTCCTAATGAT+AGG + chr4_3:33816187-33816206 None:intergenic 20.0%
!! ATTAGGAATAATTATGTAAG+TGG - chr4_3:33816190-33816209 Msa0638370:CDS 20.0%
!! TCAGATTTATTTAATGTAAC+AGG - chr4_3:33817408-33817427 Msa0638370:intron 20.0%
!!! AATTTTGAAATCATTGTTTC+AGG - chr4_3:33817440-33817459 Msa0638370:CDS 20.0%
!!! CAAATTTTGATGATGTTATT+CGG + chr4_3:33818241-33818260 None:intergenic 20.0%
!!! TATTTTTGTTAAACTTTCGT+CGG - chr4_3:33818360-33818379 Msa0638370:five_prime_UTR 20.0%
!! TTAACAGCAAAAAAAAAACA+AGG + chr4_3:33818408-33818427 None:intergenic 20.0%
!! TCTTCAATGTTTTATGAGTT+AGG - chr4_3:33814736-33814755 Msa0638370:intron 25.0%
! TGATGTTATTGGAATTGATT+TGG - chr4_3:33815432-33815451 Msa0638370:CDS 25.0%
!! GATGTTATTGGAATTGATTT+GGG - chr4_3:33815433-33815452 Msa0638370:CDS 25.0%
!!! ATGTTATTGGAATTGATTTG+GGG - chr4_3:33815434-33815453 Msa0638370:CDS 25.0%
! CATTAAAGAAACACATGAAT+TGG + chr4_3:33815464-33815483 None:intergenic 25.0%
! CAATTCATGTGTTTCTTTAA+TGG - chr4_3:33815462-33815481 Msa0638370:intron 25.0%
!!! CTATTTCTCTTGATTACTTT+TGG - chr4_3:33815501-33815520 Msa0638370:intron 25.0%
!!! ATTACTTTTGGACATGTTTT+TGG - chr4_3:33815513-33815532 Msa0638370:intron 25.0%
!!! TAACTTTAGGATTCTGAAAA+GGG + chr4_3:33815570-33815589 None:intergenic 25.0%
!!! ATAACTTTAGGATTCTGAAA+AGG + chr4_3:33815571-33815590 None:intergenic 25.0%
! TCAGAATTCTCAATAACTTT+AGG + chr4_3:33815583-33815602 None:intergenic 25.0%
! AAAGTTATTGAGAATTCTGA+AGG - chr4_3:33815583-33815602 Msa0638370:intron 25.0%
!! TTTTGTTCTTACTAAGATGA+AGG - chr4_3:33815861-33815880 Msa0638370:intron 25.0%
!!! CTTTAGAAATTGTTTTTCCA+AGG + chr4_3:33815903-33815922 None:intergenic 25.0%
!! ACCGTTTGAAATTTCTAAAA+TGG + chr4_3:33816115-33816134 None:intergenic 25.0%
! TAATGATAGGTTAAGAAAGA+TGG + chr4_3:33816174-33816193 None:intergenic 25.0%
! ATCTTTCTTAACCTATCATT+AGG - chr4_3:33816173-33816192 Msa0638370:CDS 25.0%
!! TCACTGATAACATATTTTTC+AGG - chr4_3:33816213-33816232 Msa0638370:CDS 25.0%
!!! AGATTTTGATAATGCTTTGT+TGG - chr4_3:33816273-33816292 Msa0638370:CDS 25.0%
!!! AGAATTGTTTTCTATTTCTG+AGG - chr4_3:33816901-33816920 Msa0638370:CDS 25.0%
!!! AGTAAGATACTTTTTTTGGA+GGG + chr4_3:33816981-33817000 None:intergenic 25.0%
!!! TGTCAGTAAGATACTTTTTT+TGG + chr4_3:33816985-33817004 None:intergenic 25.0%
! AAACCAAAATAAAACCAAAC+AGG + chr4_3:33817049-33817068 None:intergenic 25.0%
! CAATAAAAAGGAAATCAAAC+AGG - chr4_3:33817238-33817257 Msa0638370:CDS 25.0%
! GAAAACAAAAGAGAAATCTA+GGG + chr4_3:33817264-33817283 None:intergenic 25.0%
!!! GTAACATGTAGATTTTGAAA+AGG - chr4_3:33817322-33817341 Msa0638370:CDS 25.0%
!!! TTTTGAAAAGGAAATCAAAC+AGG - chr4_3:33817334-33817353 Msa0638370:intron 25.0%
TGTGCGGTTGTAATAATATA+GGG + chr4_3:33814481-33814500 None:intergenic 30.0%
ATGTGCGGTTGTAATAATAT+AGG + chr4_3:33814482-33814501 None:intergenic 30.0%
TGAAGTGAAATTAGGGTTTA+GGG + chr4_3:33814533-33814552 None:intergenic 30.0%
!!! AGAAGGGTTTTAGTTTTGTT+TGG + chr4_3:33814559-33814578 None:intergenic 30.0%
!! TCTACTTTTCACATAATCTG+TGG - chr4_3:33814910-33814929 Msa0638370:CDS 30.0%
!!! TTTTTTGTGTTACCGATCAT+TGG - chr4_3:33814987-33815006 Msa0638370:CDS 30.0%
! TTTTTGTGTTACCGATCATT+GGG - chr4_3:33814988-33815007 Msa0638370:CDS 30.0%
AATATACATGACCCAATGAT+CGG + chr4_3:33815002-33815021 None:intergenic 30.0%
ATTGGGTCATGTATATTTGT+TGG - chr4_3:33815005-33815024 Msa0638370:CDS 30.0%
TGATATCATGGTATCATTCA+TGG - chr4_3:33815152-33815171 Msa0638370:CDS 30.0%
CTGCAAAACAATCAAAAGAA+AGG + chr4_3:33815241-33815260 None:intergenic 30.0%
TTCATGTGTTTCTTTAATGG+AGG - chr4_3:33815465-33815484 Msa0638370:intron 30.0%
TCATGTGTTTCTTTAATGGA+GGG - chr4_3:33815466-33815485 Msa0638370:intron 30.0%
!! AAAAAGAGTATTTGTTGGGT+TGG + chr4_3:33815692-33815711 None:intergenic 30.0%
! AACCCAACAAATACTCTTTT+TGG - chr4_3:33815691-33815710 Msa0638370:intron 30.0%
!! TGCCAAAAAGAGTATTTGTT+GGG + chr4_3:33815696-33815715 None:intergenic 30.0%
AACACAAAAGGAGATGAAAA+TGG - chr4_3:33815753-33815772 Msa0638370:intron 30.0%
!! TAAGAACAAAAGCACCAATT+TGG + chr4_3:33815852-33815871 None:intergenic 30.0%
AATTTCAAACGGTGTATTTG+AGG - chr4_3:33816122-33816141 Msa0638370:CDS 30.0%
!! TGATAGTATTGATCTTGCAA+AGG - chr4_3:33816324-33816343 Msa0638370:CDS 30.0%
TGGTAAATAACCTGATTGAA+AGG - chr4_3:33816506-33816525 Msa0638370:CDS 30.0%
AACATCCTTGATAGATATGT+TGG + chr4_3:33816566-33816585 None:intergenic 30.0%
!!! GTAAGATACTTTTTTTGGAG+GGG + chr4_3:33816980-33816999 None:intergenic 30.0%
!!! CAGTAAGATACTTTTTTTGG+AGG + chr4_3:33816982-33817001 None:intergenic 30.0%
GAACCATTGTAAATAACTGA+AGG - chr4_3:33817023-33817042 Msa0638370:CDS 30.0%
GTTCACATAGAATCAGAAAA+AGG - chr4_3:33817185-33817204 Msa0638370:CDS 30.0%
ATAAAACAGAAACACCTTCT+AGG + chr4_3:33817217-33817236 None:intergenic 30.0%
CGAAAACAAAAGAGAAATCT+AGG + chr4_3:33817265-33817284 None:intergenic 30.0%
GAATAGTGAATCGATAAAAC+AGG + chr4_3:33817288-33817307 None:intergenic 30.0%
ACTAATCATCACATAATTGC+TGG - chr4_3:33818126-33818145 Msa0638370:intron 30.0%
CTTTCAGCACAAACAAAAAA+TGG + chr4_3:33818282-33818301 None:intergenic 30.0%
ATATATTAACCACCAACCAA+TGG + chr4_3:33818312-33818331 None:intergenic 30.0%
GGTTGTAATAATATAGGGGT+GGG + chr4_3:33814476-33814495 None:intergenic 35.0%
GTGCGGTTGTAATAATATAG+GGG + chr4_3:33814480-33814499 None:intergenic 35.0%
GAATGAGGTTATGAAATGTG+CGG + chr4_3:33814497-33814516 None:intergenic 35.0%
!! GAAATTAGGGTTTAGGGTTT+TGG + chr4_3:33814527-33814546 None:intergenic 35.0%
GTGAAGTGAAATTAGGGTTT+AGG + chr4_3:33814534-33814553 None:intergenic 35.0%
TTGGCTGTGAAGTGAAATTA+GGG + chr4_3:33814540-33814559 None:intergenic 35.0%
TTTGGCTGTGAAGTGAAATT+AGG + chr4_3:33814541-33814560 None:intergenic 35.0%
ATAGAGATTTACCGATCGAA+AGG + chr4_3:33814671-33814690 None:intergenic 35.0%
TGAGCAAAAATAGTGAAGTG+AGG + chr4_3:33814696-33814715 None:intergenic 35.0%
GTTCCGTGATACTATCATTT+GGG - chr4_3:33814932-33814951 Msa0638370:CDS 35.0%
AGACCCAAATGATAGTATCA+CGG + chr4_3:33814938-33814957 None:intergenic 35.0%
TAACAACCTGTCATTGAACA+TGG + chr4_3:33815059-33815078 None:intergenic 35.0%
!! TTGATTGTTTTGCAGTTGAC+AGG - chr4_3:33815246-33815265 Msa0638370:CDS 35.0%
ATCATATGCAGCTCAAAAGT+GGG - chr4_3:33815281-33815300 Msa0638370:CDS 35.0%
! TGCTTTTGTACTACAGTTCT+AGG - chr4_3:33815398-33815417 Msa0638370:CDS 35.0%
TGTTTCTTTAATGGAGGGAA+AGG - chr4_3:33815471-33815490 Msa0638370:intron 35.0%
!! GTGCCAAAAAGAGTATTTGT+TGG + chr4_3:33815697-33815716 None:intergenic 35.0%
! TTCATCTCCTTTTGTGTTTG+CGG + chr4_3:33815751-33815770 None:intergenic 35.0%
!!! CTCATTGCTGTTTTTGATCT+CGG - chr4_3:33816069-33816088 Msa0638370:CDS 35.0%
GATATTCAAATGCTTTGCAC+CGG + chr4_3:33816458-33816477 None:intergenic 35.0%
TAACCTGATTGAAAGGACAA+AGG - chr4_3:33816513-33816532 Msa0638370:CDS 35.0%
AGATGCCAACATATCTATCA+AGG - chr4_3:33816558-33816577 Msa0638370:CDS 35.0%
ATCTATCAAGGATGTTGATG+AGG - chr4_3:33816570-33816589 Msa0638370:CDS 35.0%
TTGTAGGAATTGTTGTGTTG+CGG + chr4_3:33816825-33816844 None:intergenic 35.0%
AATTCCTACAAAGAAGAGTC+AGG - chr4_3:33816834-33816853 Msa0638370:CDS 35.0%
ATTACCTGACTCTTCTTTGT+AGG + chr4_3:33816841-33816860 None:intergenic 35.0%
!!! ATACTTTTTTTGGAGGGGTT+GGG + chr4_3:33816975-33816994 None:intergenic 35.0%
AGTATCTTACTGACATTCCA+AGG - chr4_3:33816990-33817009 Msa0638370:CDS 35.0%
GTATCTTACTGACATTCCAA+GGG - chr4_3:33816991-33817010 Msa0638370:CDS 35.0%
AGGCCTTCAGTTATTTACAA+TGG + chr4_3:33817029-33817048 None:intergenic 35.0%
TAAATAACTGAAGGCCTGTT+TGG - chr4_3:33817032-33817051 Msa0638370:CDS 35.0%
!!! AGGCCTGTTTGGTTTTATTT+TGG - chr4_3:33817043-33817062 Msa0638370:CDS 35.0%
GAAAAAGGATAACACCTAGA+AGG - chr4_3:33817200-33817219 Msa0638370:CDS 35.0%
TCAAAAGTGACTTCAATCTG+AGG + chr4_3:33817600-33817619 None:intergenic 35.0%
! ACTTTTGACATAGATGCCAA+TGG - chr4_3:33817612-33817631 Msa0638370:CDS 35.0%
! CTTTTGACATAGATGCCAAT+GGG - chr4_3:33817613-33817632 Msa0638370:CDS 35.0%
!! TTTTCCAGTGGATTTGTCTT+TGG + chr4_3:33817655-33817674 None:intergenic 35.0%
! AATCTGTTGTTCTTTTCCAG+TGG + chr4_3:33817667-33817686 None:intergenic 35.0%
AATCGAGTAGATTGATGTGT+CGG + chr4_3:33817808-33817827 None:intergenic 35.0%
AAAAGAGTTTGAGCGAGTAT+AGG - chr4_3:33817829-33817848 Msa0638370:intron 35.0%
AAAGAGTTTGAGCGAGTATA+GGG - chr4_3:33817830-33817849 Msa0638370:intron 35.0%
!!! TCCTTATTTTGTCGTACTGT+TGG - chr4_3:33818197-33818216 Msa0638370:intron 35.0%
TCCAACAGTACGACAAAATA+AGG + chr4_3:33818201-33818220 None:intergenic 35.0%
TGCTGAAAGTTATCTACCAT+TGG - chr4_3:33818293-33818312 Msa0638370:exon 35.0%
GAAAGTTATCTACCATTGGT+TGG - chr4_3:33818297-33818316 Msa0638370:exon 35.0%
CGGTTGTAATAATATAGGGG+TGG + chr4_3:33814477-33814496 None:intergenic 40.0%
AGAGAGAGAGAGAGAAAGAA+GGG + chr4_3:33814575-33814594 None:intergenic 40.0%
TAGAGAGAGAGAGAGAAAGA+AGG + chr4_3:33814576-33814595 None:intergenic 40.0%
CTCTATTCTCCGATTCACTA+TGG - chr4_3:33814591-33814610 Msa0638370:three_prime_UTR 40.0%
TTGCATAGCGTATCAATCTG+TGG - chr4_3:33814763-33814782 Msa0638370:intron 40.0%
TGCATAGCGTATCAATCTGT+GGG - chr4_3:33814764-33814783 Msa0638370:intron 40.0%
GGTTCCGTGATACTATCATT+TGG - chr4_3:33814931-33814950 Msa0638370:CDS 40.0%
TGTGTGTTAGGGATGATGAA+AGG - chr4_3:33814961-33814980 Msa0638370:CDS 40.0%
CTGTTACCATGTTCAATGAC+AGG - chr4_3:33815050-33815069 Msa0638370:CDS 40.0%
TGGTATCATTCATGGAACAG+CGG - chr4_3:33815160-33815179 Msa0638370:CDS 40.0%
! CACTTTTGAGCTGCATATGA+TGG + chr4_3:33815282-33815301 None:intergenic 40.0%
CATCATATGCAGCTCAAAAG+TGG - chr4_3:33815280-33815299 Msa0638370:CDS 40.0%
TGCCTTTGTTCTGTACTGTA+TGG - chr4_3:33815337-33815356 Msa0638370:CDS 40.0%
TGCCATACAGTACAGAACAA+AGG + chr4_3:33815342-33815361 None:intergenic 40.0%
CTTTAATGGAGGGAAAGGTA+AGG - chr4_3:33815476-33815495 Msa0638370:intron 40.0%
!!! TTGGACATGTTTTTGGTGCA+TGG - chr4_3:33815520-33815539 Msa0638370:intron 40.0%
! AAGGGTATAAGCATTAGTCC+AGG + chr4_3:33815552-33815571 None:intergenic 40.0%
! TTGAGAATTCTGAAGGAGCT+CGG - chr4_3:33815590-33815609 Msa0638370:intron 40.0%
TTTGGCACCAAACGTTTGAT+TGG - chr4_3:33815709-33815728 Msa0638370:intron 40.0%
TGATGATCCGCAAACACAAA+AGG - chr4_3:33815741-33815760 Msa0638370:intron 40.0%
GGTACCCTATAAGATTGTCA+AGG - chr4_3:33815774-33815793 Msa0638370:intron 40.0%
GGTGCCTTGACAATCTTATA+GGG + chr4_3:33815781-33815800 None:intergenic 40.0%
!! ACAAAAGCACCAATTTGGCT+GGG + chr4_3:33815847-33815866 None:intergenic 40.0%
!! AACAAAAGCACCAATTTGGC+TGG + chr4_3:33815848-33815867 None:intergenic 40.0%
TAAGATGAAGGAAACTGCTG+AGG - chr4_3:33815873-33815892 Msa0638370:intron 40.0%
TGAGCATCATTGAAGTAAGC+TGG + chr4_3:33815940-33815959 None:intergenic 40.0%
CTTACTTCAATGATGCTCAG+AGG - chr4_3:33815941-33815960 Msa0638370:intron 40.0%
AAAGATGCTGGTAGAATTGC+CGG - chr4_3:33815973-33815992 Msa0638370:intron 40.0%
AATTCTCAGCACTTCAAGAC+CGG + chr4_3:33815995-33816014 None:intergenic 40.0%
ATATGGGATGAACAGCAAAG+AGG - chr4_3:33816044-33816063 Msa0638370:intron 40.0%
TATGGGATGAACAGCAAAGA+GGG - chr4_3:33816045-33816064 Msa0638370:intron 40.0%
!!! ATTGCTGTTTTTGATCTCGG+AGG - chr4_3:33816072-33816091 Msa0638370:CDS 40.0%
! TTTCAGGTGAAAGCTACCAA+TGG - chr4_3:33816229-33816248 Msa0638370:CDS 40.0%
TACCAATGGTGACACTTTCT+TGG - chr4_3:33816243-33816262 Msa0638370:CDS 40.0%
ACCAATGGTGACACTTTCTT+GGG - chr4_3:33816244-33816263 Msa0638370:CDS 40.0%
GTTGACTAGATCGAAGTTTG+AGG - chr4_3:33816480-33816499 Msa0638370:CDS 40.0%
! TAGATCGAAGTTTGAGGCTT+TGG - chr4_3:33816486-33816505 Msa0638370:CDS 40.0%
TCTTTCAAGCAGCTCTTACA+GGG + chr4_3:33816541-33816560 None:intergenic 40.0%
ATCTTTCAAGCAGCTCTTAC+AGG + chr4_3:33816542-33816561 None:intergenic 40.0%
TTTGGAAAGAGTCCTAGCAA+AGG - chr4_3:33816652-33816671 Msa0638370:CDS 40.0%
TCAGGATTTACTCCTTTGCT+AGG + chr4_3:33816667-33816686 None:intergenic 40.0%
CAAAGGAGTAAATCCTGATG+AGG - chr4_3:33816669-33816688 Msa0638370:intron 40.0%
TGTAGGAATTGTTGTGTTGC+GGG + chr4_3:33816824-33816843 None:intergenic 40.0%
!!! TACTTTTTTTGGAGGGGTTG+GGG + chr4_3:33816974-33816993 None:intergenic 40.0%
!!! GATACTTTTTTTGGAGGGGT+TGG + chr4_3:33816976-33816995 None:intergenic 40.0%
ATGGTTCTCTTCTTTACCCT+TGG + chr4_3:33817010-33817029 None:intergenic 40.0%
TCCCGAAAACGAGAAACTTA+GGG + chr4_3:33817360-33817379 None:intergenic 40.0%
CTTGGAGAATTTGACCTTGT+TGG - chr4_3:33817549-33817568 Msa0638370:intron 40.0%
AGAGACAGTAACAATCCCAT+TGG + chr4_3:33817631-33817650 None:intergenic 40.0%
TAGGGAAAAGATTCCTAGTG+AGG - chr4_3:33817848-33817867 Msa0638370:intron 40.0%
TGCGAAGGAAATTGAAGATG+CGG - chr4_3:33817872-33817891 Msa0638370:intron 40.0%
AACAAAGCCGTGTCAAAGAT+TGG - chr4_3:33817963-33817982 Msa0638370:intron 40.0%
ATGCTGACCAATCTTTGACA+CGG + chr4_3:33817973-33817992 None:intergenic 40.0%
! AAGATTGGTCAGCATATGTC+AGG - chr4_3:33817978-33817997 Msa0638370:intron 40.0%
GTCAAGAAGTGAGACAACTT+AGG - chr4_3:33818077-33818096 Msa0638370:intron 40.0%
! TTGCTGGAAGCATACAACAA+AGG - chr4_3:33818142-33818161 Msa0638370:intron 40.0%
! AGTTATCTACCATTGGTTGG+TGG - chr4_3:33818300-33818319 Msa0638370:exon 40.0%
GTTAAACTTTCGTCGGAGAA+AGG - chr4_3:33818367-33818386 Msa0638370:five_prime_UTR 40.0%
!!! GGTTTTGGTAGTGACGAATG+AGG + chr4_3:33814512-33814531 None:intergenic 45.0%
! AGATCTGTGAATCTGAGACG+TGG - chr4_3:33814845-33814864 Msa0638370:CDS 45.0%
TTTGGGTCTCTGTGTGTGTT+AGG - chr4_3:33814949-33814968 Msa0638370:CDS 45.0%
TTGGGTCTCTGTGTGTGTTA+GGG - chr4_3:33814950-33814969 Msa0638370:CDS 45.0%
TGTTGGATTACCTTTGCGAC+TGG - chr4_3:33815022-33815041 Msa0638370:CDS 45.0%
AACAGTATAGCCAGTCGCAA+AGG + chr4_3:33815035-33815054 None:intergenic 45.0%
AGCTCAAAAGTGGGCAAGTT+TGG - chr4_3:33815290-33815309 Msa0638370:CDS 45.0%
! GGCAAAACAAAGCACCTGAA+AGG + chr4_3:33815321-33815340 None:intergenic 45.0%
CCAATAACATCACTACCAGC+AGG + chr4_3:33815424-33815443 None:intergenic 45.0%
! CCTGCTGGTAGTGATGTTAT+TGG - chr4_3:33815421-33815440 Msa0638370:CDS 45.0%
!! TTTGGTGCATGGTTTTTGCC+TGG - chr4_3:33815531-33815550 Msa0638370:intron 45.0%
GCACCAAACGTTTGATTGGT+AGG - chr4_3:33815713-33815732 Msa0638370:intron 45.0%
GGGTGCCTTGACAATCTTAT+AGG + chr4_3:33815782-33815801 None:intergenic 45.0%
! AAGATTGTCAAGGCACCCAA+TGG - chr4_3:33815784-33815803 Msa0638370:intron 45.0%
TCAACCCATGCATCTCCATT+GGG + chr4_3:33815802-33815821 None:intergenic 45.0%
TTCAACCCATGCATCTCCAT+TGG + chr4_3:33815803-33815822 None:intergenic 45.0%
CAGTATTCTCCCAGCCAAAT+TGG - chr4_3:33815835-33815854 Msa0638370:intron 45.0%
! TATGAAAGTGCAGCTGCAGT+GGG + chr4_3:33816027-33816046 None:intergenic 45.0%
! ATATGAAAGTGCAGCTGCAG+TGG + chr4_3:33816028-33816047 None:intergenic 45.0%
ACTGCAGCTGCACTTTCATA+TGG - chr4_3:33816027-33816046 Msa0638370:intron 45.0%
CTGCAGCTGCACTTTCATAT+GGG - chr4_3:33816028-33816047 Msa0638370:intron 45.0%
ATGGGATGAACAGCAAAGAG+GGG - chr4_3:33816046-33816065 Msa0638370:intron 45.0%
GGTTAAGAAAGATGGCAGCA+TGG + chr4_3:33816166-33816185 None:intergenic 45.0%
!! TCCCAAGAAAGTGTCACCAT+TGG + chr4_3:33816248-33816267 None:intergenic 45.0%
AATGGTGACACTTTCTTGGG+AGG - chr4_3:33816247-33816266 Msa0638370:CDS 45.0%
CATCAGCAGTGATGAAAGGA+AGG + chr4_3:33816432-33816451 None:intergenic 45.0%
GATGCATCAGCAGTGATGAA+AGG + chr4_3:33816436-33816455 None:intergenic 45.0%
TTCATCACTGCTGATGCATC+CGG - chr4_3:33816436-33816455 Msa0638370:CDS 45.0%
GTGCCTTTGTCCTTTCAATC+AGG + chr4_3:33816519-33816538 None:intergenic 45.0%
! GTTGATGAGGTTCTTCTCGT+CGG - chr4_3:33816583-33816602 Msa0638370:CDS 45.0%
GAGGTGGTTTCAGAGATCTT+TGG - chr4_3:33816634-33816653 Msa0638370:CDS 45.0%
GCAGCTCTTTAACATCACCA+CGG + chr4_3:33816732-33816751 None:intergenic 45.0%
!! ATCCCTGGGTATTGAGACTT+TGG - chr4_3:33816774-33816793 Msa0638370:intron 45.0%
!! TCCCTGGGTATTGAGACTTT+GGG - chr4_3:33816775-33816794 Msa0638370:intron 45.0%
ACCCAAAGTCTCAATACCCA+GGG + chr4_3:33816779-33816798 None:intergenic 45.0%
GGTTGGGGGAGATTTGATTA+AGG + chr4_3:33816959-33816978 None:intergenic 45.0%
!!! ACTTTTTTTGGAGGGGTTGG+GGG + chr4_3:33816973-33816992 None:intergenic 45.0%
! GGCCCTAAGTTTCTCGTTTT+CGG - chr4_3:33817355-33817374 Msa0638370:intron 45.0%
! GCCCTAAGTTTCTCGTTTTC+GGG - chr4_3:33817356-33817375 Msa0638370:intron 45.0%
CTCCCGAAAACGAGAAACTT+AGG + chr4_3:33817361-33817380 None:intergenic 45.0%
AGCTGACAATCAGACTCAAG+TGG - chr4_3:33817476-33817495 Msa0638370:CDS 45.0%
GCTGACAATCAGACTCAAGT+GGG - chr4_3:33817477-33817496 Msa0638370:CDS 45.0%
TCAGACTCAAGTGGGTATCA+AGG - chr4_3:33817485-33817504 Msa0638370:CDS 45.0%
! AATCTGAGGCAAACCTCTTG+GGG + chr4_3:33817586-33817605 None:intergenic 45.0%
! CAATCTGAGGCAAACCTCTT+GGG + chr4_3:33817587-33817606 None:intergenic 45.0%
! TCAATCTGAGGCAAACCTCT+TGG + chr4_3:33817588-33817607 None:intergenic 45.0%
TCTGCCAAAGACAAATCCAC+TGG - chr4_3:33817648-33817667 Msa0638370:intron 45.0%
ATGCTCAGAGAGATCAGGAA+AGG - chr4_3:33817754-33817773 Msa0638370:intron 45.0%
ATTTCCTTCGCAACCTCACT+AGG + chr4_3:33817864-33817883 None:intergenic 45.0%
TGCGGTCTCAGATTTGAGAA+CGG - chr4_3:33817890-33817909 Msa0638370:intron 45.0%
GATTTGAGAACGGCTATAGC+AGG - chr4_3:33817900-33817919 Msa0638370:intron 45.0%
ATTGGTCAGCATATGTCAGG+TGG - chr4_3:33817981-33818000 Msa0638370:intron 45.0%
TTGGTCAGCATATGTCAGGT+GGG - chr4_3:33817982-33818001 Msa0638370:intron 45.0%
CAGAGGAAGAAGCAAGATCG+CGG + chr4_3:33814642-33814661 None:intergenic 50.0%
CTCTGTCTCTGCCTTTCGAT+CGG - chr4_3:33814657-33814676 Msa0638370:three_prime_UTR 50.0%
! CAAGTTTGGCTCGACCTTTC+AGG - chr4_3:33815304-33815323 Msa0638370:CDS 50.0%
!! TACTACAGTTCTAGGCCTGC+TGG - chr4_3:33815406-33815425 Msa0638370:CDS 50.0%
TGGTTGAAGGCAACCACTGA+TGG + chr4_3:33815622-33815641 None:intergenic 50.0%
GTGGTTGCCTTCAACCAGAA+AGG - chr4_3:33815625-33815644 Msa0638370:intron 50.0%
!! CAGCTCTCCTTTCTGGTTGA+AGG + chr4_3:33815635-33815654 None:intergenic 50.0%
CAACAAGCAGCTCTCCTTTC+TGG + chr4_3:33815642-33815661 None:intergenic 50.0%
CAGAAAGGAGAGCTGCTTGT+TGG - chr4_3:33815640-33815659 Msa0638370:intron 50.0%
GCGCCTACCAATCAAACGTT+TGG + chr4_3:33815719-33815738 None:intergenic 50.0%
GAAACTGCTGAGGCATACCT+TGG - chr4_3:33815883-33815902 Msa0638370:intron 50.0%
CTTCAATGATGCTCAGAGGC+AGG - chr4_3:33815945-33815964 Msa0638370:intron 50.0%
AGGCAGGCAACAAAAGATGC+TGG - chr4_3:33815961-33815980 Msa0638370:intron 50.0%
!!! GCTGTTTTTGATCTCGGAGG+TGG - chr4_3:33816075-33816094 Msa0638370:CDS 50.0%
AGGATAAGCTTGCGTTGCAG+AGG - chr4_3:33816344-33816363 Msa0638370:CDS 50.0%
ATGAGGTTCTTCTCGTCGGA+GGG - chr4_3:33816587-33816606 Msa0638370:CDS 50.0%
GACTCGTGTACCTAAAGTGC+AGG - chr4_3:33816612-33816631 Msa0638370:CDS 50.0%
TCGTGTACCTAAAGTGCAGG+AGG - chr4_3:33816615-33816634 Msa0638370:CDS 50.0%
TGTACCTAAAGTGCAGGAGG+TGG - chr4_3:33816618-33816637 Msa0638370:CDS 50.0%
GAAACCACCTCCTGCACTTT+AGG + chr4_3:33816625-33816644 None:intergenic 50.0%
TCCTGATGAGGCTGTTGCAA+TGG - chr4_3:33816681-33816700 Msa0638370:intron 50.0%
CCTGATGAGGCTGTTGCAAT+GGG - chr4_3:33816682-33816701 Msa0638370:intron 50.0%
GGGATAGAGGAGTGACATCT+AGG + chr4_3:33816759-33816778 None:intergenic 50.0%
AGATGTCACTCCTCTATCCC+TGG - chr4_3:33816759-33816778 Msa0638370:intron 50.0%
GATGTCACTCCTCTATCCCT+GGG - chr4_3:33816760-33816779 Msa0638370:intron 50.0%
GTCTCAATACCCAGGGATAG+AGG + chr4_3:33816772-33816791 None:intergenic 50.0%
CACCCAAAGTCTCAATACCC+AGG + chr4_3:33816780-33816799 None:intergenic 50.0%
!! CTGGGTATTGAGACTTTGGG+TGG - chr4_3:33816778-33816797 Msa0638370:CDS 50.0%
! TGGGTATCAAGGTGCTCCAA+GGG - chr4_3:33817496-33817515 Msa0638370:intron 50.0%
GCTGCAGACAACAAGAGTCT+TGG - chr4_3:33817531-33817550 Msa0638370:intron 50.0%
CAGATTACCATCCGCTCATC+AGG - chr4_3:33817681-33817700 Msa0638370:intron 50.0%
ATTACCATCCGCTCATCAGG+AGG - chr4_3:33817684-33817703 Msa0638370:intron 50.0%
GTTGCATGCTCAGAGAGATC+AGG - chr4_3:33817749-33817768 Msa0638370:intron 50.0%
GATTCCTAGTGAGGTTGCGA+AGG - chr4_3:33817857-33817876 Msa0638370:intron 50.0%
CATATGTCAGGTGGGTCAAG+TGG - chr4_3:33817990-33818009 Msa0638370:intron 50.0%
TCAAGTGGAGGTTCCTCTGA+TGG - chr4_3:33818005-33818024 Msa0638370:intron 50.0%
TCCAGAGGCAGAGTATGAAG+AGG - chr4_3:33818055-33818074 Msa0638370:intron 50.0%
ACCTCTTCATACTCTGCCTC+TGG + chr4_3:33818059-33818078 None:intergenic 50.0%
AGACGGCGGCCATAGTGAAT+CGG + chr4_3:33814603-33814622 None:intergenic 55.0%
AGGAAGAAGCAAGATCGCGG+CGG + chr4_3:33814639-33814658 None:intergenic 55.0%
CGATCGAAAGGCAGAGACAG+AGG + chr4_3:33814659-33814678 None:intergenic 55.0%
AGCTCGGACAACACCATCAG+TGG - chr4_3:33815606-33815625 Msa0638370:intron 55.0%
GTTGGTTACAGCCTGACGCT+TGG + chr4_3:33815674-33815693 None:intergenic 55.0%
AGGCACCCAATGGAGATGCA+TGG - chr4_3:33815794-33815813 Msa0638370:intron 55.0%
GGCACCCAATGGAGATGCAT+GGG - chr4_3:33815795-33815814 Msa0638370:intron 55.0%
GATGAGGTTCTTCTCGTCGG+AGG - chr4_3:33816586-33816605 Msa0638370:CDS 55.0%
CCCATTGCAACAGCCTCATC+AGG + chr4_3:33816685-33816704 None:intergenic 55.0%
TGCAATGGGAGCAGCTCTTC+AGG - chr4_3:33816696-33816715 Msa0638370:intron 55.0%
GCAATGGGAGCAGCTCTTCA+GGG - chr4_3:33816697-33816716 Msa0638370:intron 55.0%
CTTCAGGGTGGTATTCTCCG+TGG - chr4_3:33816712-33816731 Msa0638370:intron 55.0%
! GTGGGTATCAAGGTGCTCCA+AGG - chr4_3:33817495-33817514 Msa0638370:intron 55.0%
! GGGTATCAAGGTGCTCCAAG+GGG - chr4_3:33817497-33817516 Msa0638370:intron 55.0%
CTGAGAGTCCTCCTGATGAG+CGG + chr4_3:33817695-33817714 None:intergenic 55.0%
ATGTCAGGTGGGTCAAGTGG+AGG - chr4_3:33817993-33818012 Msa0638370:intron 55.0%
AGTGGAGGTTCCTCTGATGG+AGG - chr4_3:33818008-33818027 Msa0638370:intron 55.0%
TCCTCTGATGGAGGTTCTCC+AGG - chr4_3:33818017-33818036 Msa0638370:intron 55.0%
ACCTGGAGAACCTCCATCAG+AGG + chr4_3:33818021-33818040 None:intergenic 55.0%
TCTGATGGAGGTTCTCCAGG+TGG - chr4_3:33818020-33818039 Msa0638370:intron 55.0%
! TTCTCCAGGTGGTGGTGAAC+AGG - chr4_3:33818031-33818050 Msa0638370:intron 55.0%
TGGTACACCTGCCAAGCGTC+AGG - chr4_3:33815660-33815679 Msa0638370:intron 60.0%
GTTACAGCCTGACGCTTGGC+AGG + chr4_3:33815670-33815689 None:intergenic 60.0%
ATGGGAGCAGCTCTTCAGGG+TGG - chr4_3:33816700-33816719 Msa0638370:intron 60.0%
! GCTCCAAGGGGAGCGTGAAA+TGG - chr4_3:33817509-33817528 Msa0638370:intron 60.0%
CAGCCATTTCACGCTCCCCT+TGG + chr4_3:33817515-33817534 None:intergenic 60.0%
GGGCAGGAGGAATGCCAACA+AGG + chr4_3:33817566-33817585 None:intergenic 60.0%
TGAGGCAAACCTCTTGGGGC+AGG + chr4_3:33817582-33817601 None:intergenic 60.0%
GAGTCCTCCTGATGAGCGGA+TGG + chr4_3:33817691-33817710 None:intergenic 60.0%
GATGGAGGTTCTCCAGGTGG+TGG - chr4_3:33818023-33818042 Msa0638370:intron 60.0%
! TGGTGGTGAACAGGCTCCAG+AGG - chr4_3:33818040-33818059 Msa0638370:intron 60.0%
CAAGATCGCGGCGGAGAGCA+CGG + chr4_3:33814630-33814649 None:intergenic 65.0%
GGCATTCCTCCTGCCCCAAG+AGG - chr4_3:33817570-33817589 Msa0638370:intron 65.0%
GGCAAACCTCTTGGGGCAGG+AGG + chr4_3:33817579-33817598 None:intergenic 65.0%
GGAGCCTGTTCACCACCACC+TGG + chr4_3:33818038-33818057 None:intergenic 65.0%
! GAGAGCACGGCGCAAGACGG+CGG + chr4_3:33814617-33814636 None:intergenic 70.0%
! GCGGAGAGCACGGCGCAAGA+CGG + chr4_3:33814620-33814639 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 33814463 33818458 33814463 ID=Msa0638370;Name=Msa0638370
chr4_3 mRNA 33814463 33818458 33814463 ID=Msa0638370-mRNA-1;Parent=Msa0638370;Name=Msa0638370-mRNA-1;_AED=0.03;_eAED=0.03;_QI=147|1|1|1|0.83|0.71|7|347|675
chr4_3 exon 33814463 33814753 33814463 ID=Msa0638370-mRNA-1:exon:7627;Parent=Msa0638370-mRNA-1
chr4_3 exon 33814777 33815459 33814777 ID=Msa0638370-mRNA-1:exon:7626;Parent=Msa0638370-mRNA-1
chr4_3 exon 33816066 33816686 33816066 ID=Msa0638370-mRNA-1:exon:7625;Parent=Msa0638370-mRNA-1
chr4_3 exon 33816778 33817344 33816778 ID=Msa0638370-mRNA-1:exon:7624;Parent=Msa0638370-mRNA-1
chr4_3 exon 33817429 33817507 33817429 ID=Msa0638370-mRNA-1:exon:7623;Parent=Msa0638370-mRNA-1
chr4_3 exon 33817596 33817660 33817596 ID=Msa0638370-mRNA-1:exon:7622;Parent=Msa0638370-mRNA-1
chr4_3 exon 33818243 33818458 33818243 ID=Msa0638370-mRNA-1:exon:7621;Parent=Msa0638370-mRNA-1
chr4_3 five_prime_UTR 33818312 33818458 33818312 ID=Msa0638370-mRNA-1:five_prime_utr;Parent=Msa0638370-mRNA-1
chr4_3 CDS 33818243 33818311 33818243 ID=Msa0638370-mRNA-1:cds;Parent=Msa0638370-mRNA-1
chr4_3 CDS 33817596 33817660 33817596 ID=Msa0638370-mRNA-1:cds;Parent=Msa0638370-mRNA-1
chr4_3 CDS 33817429 33817507 33817429 ID=Msa0638370-mRNA-1:cds;Parent=Msa0638370-mRNA-1
chr4_3 CDS 33816778 33817344 33816778 ID=Msa0638370-mRNA-1:cds;Parent=Msa0638370-mRNA-1
chr4_3 CDS 33816066 33816686 33816066 ID=Msa0638370-mRNA-1:cds;Parent=Msa0638370-mRNA-1
chr4_3 CDS 33814833 33815459 33814833 ID=Msa0638370-mRNA-1:cds;Parent=Msa0638370-mRNA-1
chr4_3 three_prime_UTR 33814777 33814832 33814777 ID=Msa0638370-mRNA-1:three_prime_utr;Parent=Msa0638370-mRNA-1
chr4_3 three_prime_UTR 33814463 33814753 33814463 ID=Msa0638370-mRNA-1:three_prime_utr;Parent=Msa0638370-mRNA-1
Gene Sequence

>Msa0638370

ATGGCCGCCGTCTTGCGCCGTGCTCTCCGCCGCGATCTTGCTTCTTCCTCTGTCTCTGCCTTTCGATCGTTGACAGGCAGCACTAAGCCATCATATGCAGCTCAAAAGTGGGCAAGTTTGGCTCGACCTTTCAGTTCTAGGCCTGCTGGTAGTGATGTTATTGGAATTGATTTGGGGACTACCAATTCATGTGTTTCTTTAATGGAGGGAAAGAATCCTAAAGTTATTGAGAATTCTGAAGGAGCTCGGACAACACCATCAGTGGTTGCCTTCAACCAGAAAGGAGAGCTGCTTGTTGGTACACCTGCCAAGCGTCAGGCTGTAACCAACCCAACAAATACTCTTTTTGGCACCAAACGTTTGATTGGTAGGCGCTTTGATGATCCGCAAACACAAAAGGAGATGAAAATGGTACCCTATAAGATTGTCAAGGCACCCAATGGAGATGCATGGGTTGAAATCAATAAGCAGCAGTATTCTCCCAGCCAAATTGGTGCTTTTGTTCTTACTAAGATGAAGGAAACTGCTGAGGCATACCTTGGAAAAACAATTTCTAAAGCTGTAGTTACTGTTCCAGCTTACTTCAATGATGCTCAGAGGCAGGCAACAAAAGATGCTGGTAGAATTGCCGGTCTTGAAGTGCTGAGAATTATCAATGAGCCCACTGCAGCTGCACTTTCATATGGGATGAACAGCAAAGAGGGGCTCATTGCTGTTTTTGATCTCGGAGGTGGAACATTTGATGTGTCCATTTTAGAAATTTCAAACGGTGTATTTGAGGTGAAAGCTACCAATGGTGACACTTTCTTGGGAGGAGAAGATTTTGATAATGCTTTGTTGGACTTTCTAGTAAGTGAATTCAAGAGAACTGATAGTATTGATCTTGCAAAGGATAAGCTTGCGTTGCAGAGGCTTCGAGAAGCTGCTGAGAAAGCAAAAATAGAACTCTCTTCAACTTCACAAACTGAAATAAACCTTCCTTTCATCACTGCTGATGCATCCGGTGCAAAGCATTTGAATATCACGTTGACTAGATCGAAGTTTGAGGCTTTGGTAAATAACCTGATTGAAAGGACAAAGGCACCCTGTAAGAGCTGCTTGAAAGATGCCAACATATCTATCAAGGATGTTGATGAGGTTCTTCTCGTCGGAGGGATGACTCGTGTACCTAAAGTGCAGGAGGTGGTTTCAGAGATCTTTGGAAAGAGTCCTAGCAAAGGAGTAAATCCTGATGAGGCTGTTGCAATGGGAGCAGCTCTTCAGGGTGGTATTCTCCGTGGTGATGTTAAAGAGCTGCTACTCCTAGATGTCACTCCTCTATCCCTGGGTATTGAGACTTTGGGTGGTATCTTTACAAGATTGATCTCCCGCAACACAACAATTCCTACAAAGAAGAGTCAGGTGTTTTCGACAGCAGCTGACAATCAGACTCAAGTGGGTATCAAGGTGCTCCAAGGGGAGCGTGAAATGGCTGCAGACAACAAGAGTCTTGGAGAATTTGACCTTGTTGGCATTCCTCCTGCCCCAAGAGGTTTGCCTCAGATTGAAGTCACTTTTGACATAGATGCCAATGGGATTGTTACTGTCTCTGCCAAAGACAAATCCACTGGAAAAGAACAACAGATTACCATCCGCTCATCAGGAGGACTCTCAGATGATGAAATTAATAATATGGTCAAAGAAGCTGAGTTGCATGCTCAGAGAGATCAGGAAAGGAAAGCACTTATTGATATCAAGAATAGTGCCGACACATCAATCTACTCGATTGAAAAGAGTTTGAGCGAGTATAGGGAAAAGATTCCTAGTGAGGTTGCGAAGGAAATTGAAGATGCGGTCTCAGATTTGAGAACGGCTATAGCAGGAGAAAGTGTTGATGAAATTAAGACAAAACTTGACGCTGCAAACAAAGCCGTGTCAAAGATTGGTCAGCATATGTCAGGTGGGTCAAGTGGAGGTTCCTCTGATGGAGGTTCTCCAGGTGGTGGTGAACAGGCTCCAGAGGCAGAGTATGAAGAGGTCAAGAAGTGA
Protein sequence

>Msa0638370

MAAVLRRALRRDLASSSVSAFRSLTGSTKPSYAAQKWASLARPFSSRPAGSDVIGIDLGTTNSCVSLMEGKNPKVIENSEGARTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRRFDDPQTQKEMKMVPYKIVKAPNGDAWVEINKQQYSPSQIGAFVLTKMKETAEAYLGKTISKAVVTVPAYFNDAQRQATKDAGRIAGLEVLRIINEPTAAALSYGMNSKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVSEFKRTDSIDLAKDKLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFEALVNNLIERTKAPCKSCLKDANISIKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVAMGAALQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLISRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNKSLGEFDLVGIPPAPRGLPQIEVTFDIDANGIVTVSAKDKSTGKEQQITIRSSGGLSDDEINNMVKEAELHAQRDQERKALIDIKNSADTSIYSIEKSLSEYREKIPSEVAKEIEDAVSDLRTAIAGESVDEIKTKLDAANKAVSKIGQHMSGGSSGGSSDGGSPGGGEQAPEAEYEEVKK*