AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0696870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0696870 MtrunA17_Chr4g0049501 98.815 675 8 0 1 675 1 675 0.0 1352
Msa0696870 MtrunA17_Chr2g0279901 90.342 673 63 2 3 675 6 676 0.0 1216
Msa0696870 MtrunA17_Chr2g0277021 54.743 643 286 3 27 666 45 685 0.0 696
Msa0696870 MtrunA17_Chr8g0388761 53.448 580 244 10 53 614 38 609 0.0 581
Msa0696870 MtrunA17_Chr8g0388671 53.448 580 244 10 53 614 38 609 0.0 579
Msa0696870 MtrunA17_Chr4g0031301 49.298 641 283 12 54 659 10 643 0.0 570
Msa0696870 MtrunA17_Chr4g0031321 52.422 578 249 9 54 612 10 580 0.0 568
Msa0696870 MtrunA17_Chr7g0223291 49.383 648 291 11 54 673 10 648 0.0 567
Msa0696870 MtrunA17_Chr7g0262821 49.373 638 287 11 54 662 10 640 0.0 567
Msa0696870 MtrunA17_Chr7g0223181 52.249 578 250 9 54 612 10 580 0.0 567
Msa0696870 MtrunA17_Chr4g0073741 50.081 621 281 10 54 652 9 622 0.0 567
Msa0696870 MtrunA17_Chr2g0284681 45.349 602 292 13 51 630 6 592 9.36e-165 486
Msa0696870 MtrunA17_Chr7g0223721 46.769 588 285 13 46 613 2 581 3.31e-162 480
Msa0696870 MtrunA17_Chr7g0233311 46.299 581 281 12 54 612 10 581 4.14e-161 477
Msa0696870 MtrunA17_Chr7g0223781 44.020 602 305 11 54 629 10 605 6.48e-161 476
Msa0696870 MtrunA17_Chr7g0223711 45.552 562 276 10 54 595 10 561 2.14e-160 475
Msa0696870 MtrunA17_Chr2g0298851 44.828 580 292 12 54 613 10 581 6.95e-159 471
Msa0696870 MtrunA17_Chr7g0221661 45.675 578 290 11 54 613 10 581 2.20e-157 468
Msa0696870 MtrunA17_Chr7g0223851 45.189 582 287 14 54 613 19 590 7.61e-157 466
Msa0696870 MtrunA17_Chr8g0350731 44.538 595 291 13 17 595 17 588 8.23e-157 467
Msa0696870 MtrunA17_Chr7g0223751 45.161 558 283 11 54 595 10 560 4.59e-156 464
Msa0696870 MtrunA17_Chr6g0462601 44.345 557 289 9 54 595 10 560 5.63e-156 464
Msa0696870 MtrunA17_Chr4g0040931 45.876 582 283 14 54 613 10 581 3.03e-155 462
Msa0696870 MtrunA17_Chr2g0293581 44.538 595 294 13 54 626 11 591 4.80e-154 459
Msa0696870 MtrunA17_Chr7g0223621 43.486 591 309 12 54 626 10 593 6.10e-154 459
Msa0696870 MtrunA17_Chr5g0427901 42.810 612 292 14 54 634 10 594 3.01e-153 457
Msa0696870 MtrunA17_Chr7g0223731 44.624 558 286 10 54 595 10 560 7.12e-152 453
Msa0696870 MtrunA17_Chr7g0225671 46.359 563 269 15 52 593 15 565 1.00e-151 453
Msa0696870 MtrunA17_Chr7g0223741 44.821 560 283 10 54 595 10 561 1.01e-150 450
Msa0696870 MtrunA17_Chr7g0223701 44.092 567 285 13 54 595 10 569 3.28e-149 447
Msa0696870 MtrunA17_Chr7g0223031 45.161 558 283 11 54 595 10 560 3.67e-149 446
Msa0696870 MtrunA17_Chr2g0287631 45.455 583 279 12 54 606 10 583 3.90e-149 446
Msa0696870 MtrunA17_Chr7g0223801 43.067 613 320 15 54 647 10 612 8.43e-149 445
Msa0696870 MtrunA17_Chr6g0462681 43.627 557 293 9 54 595 10 560 2.56e-148 446
Msa0696870 MtrunA17_Chr2g0296391 45.180 529 265 9 54 564 10 531 4.49e-148 441
Msa0696870 MtrunA17_Chr2g0298861 44.167 600 295 17 46 613 2 593 6.75e-148 443
Msa0696870 MtrunA17_Chr7g0248131 44.029 561 288 13 54 595 10 563 6.11e-145 436
Msa0696870 MtrunA17_Chr7g0223631 43.063 555 285 12 54 595 10 546 5.03e-144 432
Msa0696870 MtrunA17_Chr7g0233301 44.563 561 249 14 54 593 10 529 1.54e-142 428
Msa0696870 MtrunA17_Chr7g0223821 46.857 525 244 13 40 544 1 510 4.08e-142 431
Msa0696870 MtrunA17_Chr6g0462641 40.925 562 306 9 54 595 10 565 8.10e-142 429
Msa0696870 MtrunA17_Chr6g0462771 41.459 562 303 9 54 595 10 565 1.03e-141 428
Msa0696870 MtrunA17_Chr6g0462711 41.509 583 310 12 54 612 11 586 2.43e-141 428
Msa0696870 MtrunA17_Chr7g0217971 43.604 555 268 13 54 593 10 534 6.76e-140 422
Msa0696870 MtrunA17_Chr7g0248151 43.828 559 290 12 54 595 10 561 1.16e-138 419
Msa0696870 MtrunA17_Chr4g0012541 42.096 582 296 14 54 613 10 572 1.60e-136 414
Msa0696870 MtrunA17_Chr7g0223831 42.246 561 264 17 54 593 10 531 1.71e-129 395
Msa0696870 MtrunA17_Chr2g0293601 43.478 506 232 8 54 544 10 476 2.20e-129 391
Msa0696870 MtrunA17_Chr7g0223541 44.008 509 262 10 105 595 15 518 1.97e-128 392
Msa0696870 MtrunA17_Chr7g0228281 40.760 579 272 14 54 613 71 597 6.13e-128 392
Msa0696870 MtrunA17_Chr7g0215261 42.115 558 263 14 54 593 10 525 1.93e-127 389
Msa0696870 MtrunA17_Chr6g0462611 42.147 503 273 8 106 595 11 508 2.65e-126 387
Msa0696870 MtrunA17_Chr8g0390821 37.666 677 324 22 40 645 1 650 9.80e-124 382
Msa0696870 MtrunA17_Chr7g0223681 43.949 471 244 8 137 593 5 469 7.25e-121 370
Msa0696870 MtrunA17_Chr2g0331381 39.963 543 240 12 53 578 6 479 1.32e-119 365
Msa0696870 MtrunA17_Chr2g0299921 48.346 393 186 6 43 425 1019 1404 1.29e-104 350
Msa0696870 MtrunA17_Chr2g0299921 47.727 396 187 8 54 436 1414 1802 2.01e-95 323
Msa0696870 MtrunA17_Chr2g0293561 44.792 384 191 7 54 423 10 386 8.60e-104 322
Msa0696870 MtrunA17_Chr2g0299791 46.875 384 187 6 54 427 1043 1419 2.97e-102 341
Msa0696870 MtrunA17_Chr6g0462861 36.313 537 307 12 54 577 10 524 2.13e-101 323
Msa0696870 MtrunA17_Chr2g0299851 46.842 380 189 5 54 425 1039 1413 1.29e-100 336
Msa0696870 MtrunA17_Chr2g0299821 45.407 381 187 7 54 420 10 383 5.76e-98 309
Msa0696870 MtrunA17_Chr2g0299821 50.562 89 36 1 493 573 396 484 9.82e-18 86.7
Msa0696870 MtrunA17_Chr2g0299881 43.508 439 210 12 10 427 998 1419 3.36e-95 321
Msa0696870 MtrunA17_Chr1g0151991 50.182 275 125 5 54 317 10 283 5.65e-86 271
Msa0696870 MtrunA17_Chr7g0245521 48.864 264 123 4 54 306 10 272 3.92e-79 253
Msa0696870 MtrunA17_Chr1g0166551 33.737 578 251 19 52 613 4 465 2.55e-76 253
Msa0696870 MtrunA17_Chr2g0293271 35.616 438 198 8 65 491 45 409 1.42e-72 240
Msa0696870 MtrunA17_Chr5g0394391 29.358 545 313 12 29 529 5 521 1.40e-69 237
Msa0696870 MtrunA17_Chr3g0098761 33.990 406 251 6 53 446 3 403 1.17e-67 236
Msa0696870 MtrunA17_Chr4g0004331 32.598 408 258 5 53 448 3 405 3.76e-66 233
Msa0696870 MtrunA17_Chr5g0444001 31.640 433 270 7 53 466 3 428 4.15e-64 221
Msa0696870 MtrunA17_Chr2g0331901 31.683 404 259 6 53 444 3 401 3.12e-63 225
Msa0696870 MtrunA17_Chr7g0245531 44.922 256 135 4 343 593 2 256 8.05e-63 211
Msa0696870 MtrunA17_Chr7g0223671 52.151 186 80 2 119 295 10 195 1.39e-58 196
Msa0696870 MtrunA17_Chr1g0188601 50.532 188 84 2 135 313 1 188 1.59e-55 187
Msa0696870 MtrunA17_Chr6g0462791 51.807 166 76 1 156 317 10 175 2.30e-51 176
Msa0696870 MtrunA17_Chr6g0462751 33.333 357 159 11 107 446 9 303 4.23e-51 180
Msa0696870 MtrunA17_Chr6g0462631 37.500 304 136 6 156 450 39 297 7.60e-51 178
Msa0696870 MtrunA17_Chr4g0060241 29.771 524 316 15 38 531 5 506 1.91e-50 184
Msa0696870 MtrunA17_Chr1g0152001 41.313 259 138 9 364 613 12 265 2.38e-49 175
Msa0696870 MtrunA17_Chr4g0064621 30.361 527 324 12 48 540 135 652 9.89e-49 182
Msa0696870 MtrunA17_Chr7g0223761 34.758 351 166 9 275 613 3 302 1.69e-47 171
Msa0696870 MtrunA17_Chr4g0046881 51.634 153 63 2 156 303 2 148 1.30e-45 159
Msa0696870 MtrunA17_Chr7g0223771 52.667 150 62 2 139 279 4 153 1.09e-43 154
Msa0696870 MtrunA17_Chr1g0188611 43.600 250 124 7 365 602 6 250 8.72e-43 156
Msa0696870 MtrunA17_Chr5g0442171 31.231 333 198 7 209 523 1 320 3.33e-41 152
Msa0696870 MtrunA17_Chr3g0120101 29.017 417 263 11 40 430 15 424 4.47e-38 151
Msa0696870 MtrunA17_Chr7g0223861 51.145 131 55 3 121 242 4 134 1.14e-35 131
Msa0696870 MtrunA17_Chr5g0394221 31.381 239 159 5 339 573 71 308 5.96e-32 127
Msa0696870 MtrunA17_Chr7g0245541 46.099 141 74 2 454 593 4 143 6.88e-31 120
Msa0696870 MtrunA17_Chr6g0462701 40.909 154 62 3 156 304 39 168 2.32e-29 114
Msa0696870 MtrunA17_Chr6g0462691 45.588 136 69 2 364 494 5 140 7.36e-29 112
Msa0696870 MtrunA17_Chr4g0046871 49.495 99 46 2 377 471 9 107 3.22e-23 94.7
Msa0696870 MtrunA17_Chr4g0064651 45.652 92 50 0 432 523 30 121 4.03e-19 84.0
Msa0696870 MtrunA17_Chr5g0394231 29.493 217 95 6 119 326 7 174 1.03e-18 84.7
Msa0696870 MtrunA17_Chr6g0481391 32.520 123 75 2 80 198 13 131 1.22e-17 79.7
Msa0696870 MtrunA17_Chr2g0284661 52.381 84 36 2 404 483 60 143 1.31e-17 80.1
Msa0696870 MtrunA17_Chr6g0481381 52.703 74 30 1 215 283 1 74 2.77e-15 74.7
Msa0696870 MtrunA17_Chr7g0223691 56.061 66 26 2 54 117 10 74 2.35e-14 68.6
Msa0696870 MtrunA17_Chr6g0462621 50.000 64 31 1 54 117 10 72 1.08e-13 66.6
Msa0696870 MtrunA17_Chr1g0188591 50.000 66 30 2 54 117 10 74 3.29e-13 65.9
Msa0696870 MtrunA17_Chr2g0299941 52.113 71 31 1 420 487 7 77 1.34e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0696870 AT5G09590.1 83.505 679 107 2 2 675 4 682 0.0 1142
Msa0696870 AT4G37910.1 82.169 673 116 2 3 672 5 676 0.0 1090
Msa0696870 AT4G37910.2 82.169 673 116 2 3 672 5 676 0.0 1090
Msa0696870 AT4G24280.1 57.877 603 247 4 47 645 74 673 0.0 693
Msa0696870 AT5G49910.1 56.774 620 261 4 47 663 74 689 0.0 692
Msa0696870 AT5G42020.1 54.301 558 232 9 53 595 37 586 0.0 582
Msa0696870 AT5G42020.3 54.301 558 232 9 53 595 42 591 0.0 581
Msa0696870 AT5G28540.1 54.301 558 232 9 53 595 37 586 0.0 579
Msa0696870 AT5G02500.1 51.171 598 267 10 54 631 10 602 0.0 569
Msa0696870 AT3G12580.1 49.525 632 283 12 54 661 10 629 0.0 566
Msa0696870 AT3G09440.1 51.903 578 252 9 54 612 10 580 0.0 562
Msa0696870 AT3G09440.4 51.903 578 252 9 54 612 10 580 0.0 562
Msa0696870 AT3G09440.2 51.903 578 252 9 54 612 10 580 0.0 562
Msa0696870 AT3G09440.3 51.903 578 252 9 54 612 10 580 0.0 562
Msa0696870 AT1G16030.1 48.896 634 288 11 54 663 9 630 0.0 562
Msa0696870 AT1G56410.1 49.431 615 284 10 54 648 10 617 0.0 560
Msa0696870 AT5G02490.1 48.860 614 285 10 54 643 10 618 0.0 560
Msa0696870 AT1G09080.2 52.900 569 245 10 53 607 42 601 0.0 555
Msa0696870 AT1G09080.1 52.900 569 245 10 53 607 52 611 0.0 555
Msa0696870 AT5G42020.2 55.967 486 191 9 53 523 37 514 4.23e-177 518
Msa0696870 AT5G02500.2 50.895 391 177 6 54 434 10 395 3.44e-124 379
Msa0696870 AT1G79930.2 32.274 409 260 5 53 449 3 406 5.89e-67 235
Msa0696870 AT1G79930.1 32.274 409 260 5 53 449 3 406 8.56e-67 235
Msa0696870 AT1G79920.3 32.029 409 261 5 53 449 3 406 1.02e-66 233
Msa0696870 AT1G79920.2 32.029 409 261 5 53 449 3 406 1.02e-66 233
Msa0696870 AT1G79920.4 32.029 409 261 5 53 449 3 406 1.02e-66 233
Msa0696870 AT1G79920.1 32.029 409 261 5 53 449 3 406 1.30e-66 233
Msa0696870 AT2G32120.1 30.502 518 304 12 45 531 21 513 1.05e-65 227
Msa0696870 AT2G32120.2 30.502 518 304 12 45 531 21 513 1.05e-65 227
Msa0696870 AT1G11660.4 31.220 410 264 5 53 449 3 407 7.20e-62 220
Msa0696870 AT1G11660.3 31.220 410 264 5 53 449 3 407 7.20e-62 220
Msa0696870 AT1G11660.1 31.220 410 264 5 53 449 3 407 7.20e-62 220
Msa0696870 AT1G11660.2 31.467 375 239 5 88 449 1 370 9.46e-55 200
Msa0696870 AT4G16660.1 27.571 457 291 11 48 469 21 472 2.00e-42 165
Msa0696870 AT4G16660.2 27.571 457 291 11 48 469 45 496 2.26e-42 165
Msa0696870 AT4G32208.1 69.444 108 32 1 569 675 46 153 1.34e-35 132

Find 196 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATTCATGTGTTTCTTTAA+TGG 0.139612 4_4:-66863755 Msa0696870:CDS
CAACAAGCAGCTCTCCTTTC+TGG 0.152574 4_4:+66863578 None:intergenic
CAAGTTTGGCTCGACCTTTC+AGG 0.154885 4_4:-66863913 Msa0696870:intron
ACCGTTTGAAATTTCTAAAA+TGG 0.216877 4_4:+66863105 None:intergenic
TGCAATGGGAGCAGCTCTTC+AGG 0.222059 4_4:-66862521 Msa0696870:CDS
GGGTGCCTTGACAATCTTAT+AGG 0.230055 4_4:+66863438 None:intergenic
TTTGGCTGTGAAGTGAAATT+AGG 0.232878 4_4:+66864676 None:intergenic
TCAGAATTCTCAATAACTTT+AGG 0.250981 4_4:+66863637 None:intergenic
ATCTTTCAAGCAGCTCTTAC+AGG 0.256743 4_4:+66862678 None:intergenic
TAAGAACAAAAGCACCAATT+TGG 0.281100 4_4:+66863368 None:intergenic
GTGAAGTGAAATTAGGGTTT+AGG 0.284191 4_4:+66864683 None:intergenic
AGCTCAAAAGTGGGCAAGTT+TGG 0.290535 4_4:-66863927 Msa0696870:CDS
GAAATTAGGGTTTAGGGTTT+TGG 0.297029 4_4:+66864690 None:intergenic
ATTACCTGACTCTTCTTTGT+AGG 0.299624 4_4:+66862379 None:intergenic
TGTGCGGTTGTAATAATATA+GGG 0.304897 4_4:+66864736 None:intergenic
GAAACCACCTCCTGCACTTT+AGG 0.305254 4_4:+66862595 None:intergenic
TAGATCGAAGTTTGAGGCTT+TGG 0.315791 4_4:-66862731 Msa0696870:CDS
AAAGAGTTTGAGCGAGTATA+GGG 0.317690 4_4:-66861357 Msa0696870:CDS
TGATGTTATTGGAATTGATT+TGG 0.319512 4_4:-66863785 Msa0696870:CDS
TGAAGTGAAATTAGGGTTTA+GGG 0.320670 4_4:+66864684 None:intergenic
TACCAATGGTGACACTTTCT+TGG 0.320696 4_4:-66862974 Msa0696870:CDS
ATGTGCGGTTGTAATAATAT+AGG 0.321543 4_4:+66864735 None:intergenic
TCCAACAGTACGACAAAATA+AGG 0.346294 4_4:+66860989 None:intergenic
AAAAGAGTTTGAGCGAGTAT+AGG 0.348496 4_4:-66861358 Msa0696870:CDS
ACTGCAGCTGCACTTTCATA+TGG 0.352369 4_4:-66863190 Msa0696870:CDS
CAATCTGAGGCAAACCTCTT+GGG 0.354482 4_4:+66861603 None:intergenic
ATCCCTGGGTATTGAGACTT+TGG 0.357413 4_4:-66862443 Msa0696870:CDS
CTTGGAGAATTTGACCTTGT+TGG 0.357711 4_4:-66861638 Msa0696870:CDS
AGATGATGAAATTAATAATA+TGG 0.357883 4_4:-66861474 Msa0696870:CDS
AAAGATGCTGGTAGAATTGC+CGG 0.362237 4_4:-66863244 Msa0696870:CDS
TCCTCTGATGGAGGTTCTCC+AGG 0.365670 4_4:-66861170 Msa0696870:CDS
GAGGTGGTTTCAGAGATCTT+TGG 0.369528 4_4:-66862583 Msa0696870:CDS
CAGTATTCTCCCAGCCAAAT+TGG 0.369640 4_4:-66863382 Msa0696870:CDS
AACACAAAAGGAGATGAAAA+TGG 0.372682 4_4:-66863464 Msa0696870:CDS
GATGTTATTGGAATTGATTT+GGG 0.373282 4_4:-66863784 Msa0696870:CDS
TTCTCCAGGTGGTGGTGAAC+AGG 0.375092 4_4:-66861156 Msa0696870:CDS
CCTGCTGGTAGTGATGTTAT+TGG 0.376880 4_4:-66863796 Msa0696870:CDS
GGTGCCTTGACAATCTTATA+GGG 0.378876 4_4:+66863439 None:intergenic
TTGGCTGTGAAGTGAAATTA+GGG 0.383544 4_4:+66864677 None:intergenic
TCCCTGGGTATTGAGACTTT+GGG 0.389902 4_4:-66862442 Msa0696870:CDS
GTGCCTTTGTCCTTTCAATC+AGG 0.391952 4_4:+66862701 None:intergenic
CAGCTCTCCTTTCTGGTTGA+AGG 0.397732 4_4:+66863585 None:intergenic
CATTAAAGAAACACATGAAT+TGG 0.405929 4_4:+66863756 None:intergenic
CTCTATTCTCCGATTCACTA+TGG 0.409418 4_4:-66864626 Msa0696870:exon
ACCTCTTCATACTCTGCCTC+TGG 0.409681 4_4:+66861131 None:intergenic
TGTAGGAATTGTTGTGTTGC+GGG 0.416658 4_4:+66862396 None:intergenic
CAGCCATTTCACGCTCCCCT+TGG 0.422244 4_4:+66861675 None:intergenic
CAGATTACCATCCGCTCATC+AGG 0.424767 4_4:-66861506 Msa0696870:CDS
GGGATAGAGGAGTGACATCT+AGG 0.427451 4_4:+66862461 None:intergenic
CAAGATCGCGGCGGAGAGCA+CGG 0.429764 4_4:+66864590 None:intergenic
AGATGTCACTCCTCTATCCC+TGG 0.430112 4_4:-66862458 Msa0696870:CDS
ACCAATGGTGACACTTTCTT+GGG 0.432955 4_4:-66862973 Msa0696870:CDS
TCAATCTGAGGCAAACCTCT+TGG 0.435495 4_4:+66861602 None:intergenic
GCTCCAAGGGGAGCGTGAAA+TGG 0.435720 4_4:-66861678 Msa0696870:CDS
CCCATTGCAACAGCCTCATC+AGG 0.435835 4_4:+66862535 None:intergenic
TTTGGCACCAAACGTTTGAT+TGG 0.438874 4_4:-66863508 Msa0696870:CDS
GCACCAAACGTTTGATTGGT+AGG 0.443834 4_4:-66863504 Msa0696870:CDS
AACAAAAGCACCAATTTGGC+TGG 0.450750 4_4:+66863372 None:intergenic
AACAAAGCCGTGTCAAAGAT+TGG 0.451841 4_4:-66861224 Msa0696870:CDS
CTCTGTCTCTGCCTTTCGAT+CGG 0.453056 4_4:-66864560 Msa0696870:intron
TTCATCACTGCTGATGCATC+CGG 0.456355 4_4:-66862781 Msa0696870:CDS
TTCAACCCATGCATCTCCAT+TGG 0.460739 4_4:+66863417 None:intergenic
TCAACCCATGCATCTCCATT+GGG 0.462137 4_4:+66863418 None:intergenic
GCGCCTACCAATCAAACGTT+TGG 0.472555 4_4:+66863501 None:intergenic
ATTTCCTTCGCAACCTCACT+AGG 0.475574 4_4:+66861326 None:intergenic
CAGAAAGGAGAGCTGCTTGT+TGG 0.476199 4_4:-66863577 Msa0696870:CDS
GTTGACTAGATCGAAGTTTG+AGG 0.481396 4_4:-66862737 Msa0696870:CDS
AACATCCTTGATAGATATGT+TGG 0.482621 4_4:+66862654 None:intergenic
TGGTACACCTGCCAAGCGTC+AGG 0.482660 4_4:-66863557 Msa0696870:CDS
ATGAGGTTCTTCTCGTCGGT+GGG 0.484269 4_4:-66862630 Msa0696870:CDS
AATTTCAAACGGTGTATTTG+AGG 0.485239 4_4:-66863095 Msa0696870:intron
TCAAGTGGAGGTTCCTCTGA+TGG 0.485714 4_4:-66861182 Msa0696870:CDS
GTCTCAATACCCAGGGATAG+AGG 0.485922 4_4:+66862448 None:intergenic
TACTACAGTTCTAGGCCTGC+TGG 0.490672 4_4:-66863811 Msa0696870:intron
CTGCAGCTGCACTTTCATAT+GGG 0.491179 4_4:-66863189 Msa0696870:CDS
GCAATGGGAGCAGCTCTTCA+GGG 0.497054 4_4:-66862520 Msa0696870:CDS
GTTACAGCCTGACGCTTGGC+AGG 0.501358 4_4:+66863550 None:intergenic
CTTCAATGATGCTCAGAGGC+AGG 0.501906 4_4:-66863272 Msa0696870:CDS
TGCTGAAAGTTATCTACCAT+TGG 0.509311 4_4:-66860894 Msa0696870:three_prime_UTR
AGATGCCAACATATCTATCA+AGG 0.510131 4_4:-66862659 Msa0696870:CDS
TGATGATCCGCAAACACAAA+AGG 0.515016 4_4:-66863476 Msa0696870:CDS
TGAGGCAAACCTCTTGGGGC+AGG 0.516215 4_4:+66861608 None:intergenic
AATTCCTACAAAGAAGAGTC+AGG 0.516535 4_4:-66862383 Msa0696870:intron
AAGATTGGTCAGCATATGTC+AGG 0.517534 4_4:-66861209 Msa0696870:CDS
TGAGCATCATTGAAGTAAGC+TGG 0.518266 4_4:+66863280 None:intergenic
TGGTAAATAACCTGATTGAA+AGG 0.518643 4_4:-66862711 Msa0696870:CDS
GAGAGCACGGCGCAAGACGG+CGG 0.518714 4_4:+66864603 None:intergenic
TGTTTCTTTAATGGAGGGAA+AGG 0.519248 4_4:-66863746 Msa0696870:intron
TCAGGATTTACTCCTTTGCT+AGG 0.519309 4_4:+66862553 None:intergenic
GCGGAGAGCACGGCGCAAGA+CGG 0.519906 4_4:+66864600 None:intergenic
TCATGTGTTTCTTTAATGGA+GGG 0.521862 4_4:-66863751 Msa0696870:CDS
GCTGCAGACAACAAGAGTCT+TGG 0.523262 4_4:-66861656 Msa0696870:CDS
TTCATGTGTTTCTTTAATGG+AGG 0.523829 4_4:-66863752 Msa0696870:CDS
TCAGACTCAAGTGGGTATCA+AGG 0.524218 4_4:-66861702 Msa0696870:CDS
GAAACTGCTGAGGCATACCT+TGG 0.527311 4_4:-66863334 Msa0696870:CDS
CATCATATGCAGCTCAAAAG+TGG 0.528387 4_4:-66863937 Msa0696870:CDS
TCCTGATGAGGCTGTTGCAA+TGG 0.529665 4_4:-66862536 Msa0696870:CDS
GATGAGGTTCTTCTCGTCGG+TGG 0.529703 4_4:-66862631 Msa0696870:CDS
GTTGCATGCTCAGAGAGATC+AGG 0.532569 4_4:-66861438 Msa0696870:CDS
GATTTGAGAACGGCTATAGC+AGG 0.533055 4_4:-66861287 Msa0696870:CDS
GACTCGTGTACCTAAAGTGC+AGG 0.535807 4_4:-66862605 Msa0696870:CDS
TTGTAGGAATTGTTGTGTTG+CGG 0.536039 4_4:+66862395 None:intergenic
CCTGATGAGGCTGTTGCAAT+GGG 0.536816 4_4:-66862535 Msa0696870:CDS
GTTGATGAGGTTCTTCTCGT+CGG 0.537044 4_4:-66862634 Msa0696870:CDS
TATGGGATGAACAGCAAAGA+GGG 0.537258 4_4:-66863172 Msa0696870:CDS
TGGGTATCAAGGTGCTCCAA+GGG 0.538510 4_4:-66861691 Msa0696870:CDS
GATGTCACTCCTCTATCCCT+GGG 0.540459 4_4:-66862457 Msa0696870:CDS
GGCAAACCTCTTGGGGCAGG+AGG 0.540636 4_4:+66861611 None:intergenic
AAAGTTATTGAGAATTCTGA+AGG 0.542496 4_4:-66863634 Msa0696870:CDS
CTGGGTATTGAGACTTTGGG+TGG 0.543172 4_4:-66862439 Msa0696870:CDS
AATTCTCAGCACTTCAAGAC+CGG 0.543184 4_4:+66863225 None:intergenic
AGACGGCGGCCATAGTGAAT+CGG 0.544383 4_4:+66864617 None:intergenic
GTTGGTTACAGCCTGACGCT+TGG 0.547556 4_4:+66863546 None:intergenic
GGCACCCAATGGAGATGCAT+GGG 0.549734 4_4:-66863422 Msa0696870:CDS
GATGGAGGTTCTCCAGGTGG+TGG 0.550859 4_4:-66861164 Msa0696870:CDS
TTGAGAATTCTGAAGGAGCT+CGG 0.556650 4_4:-66863627 Msa0696870:CDS
GGAGCCTGTTCACCACCACC+TGG 0.557888 4_4:+66861152 None:intergenic
ATCATATGCAGCTCAAAAGT+GGG 0.564862 4_4:-66863936 Msa0696870:CDS
CATATGTCAGGTGGGTCAAG+TGG 0.568288 4_4:-66861197 Msa0696870:CDS
TCTTTCAAGCAGCTCTTACA+GGG 0.569460 4_4:+66862679 None:intergenic
TCTGCCAAAGACAAATCCAC+TGG 0.570529 4_4:-66861539 Msa0696870:CDS
GTGGGTATCAAGGTGCTCCA+AGG 0.570815 4_4:-66861692 Msa0696870:CDS
GATATTCAAATGCTTTGCAC+CGG 0.572709 4_4:+66862762 None:intergenic
GGCATTCCTCCTGCCCCAAG+AGG 0.573254 4_4:-66861617 Msa0696870:CDS
CGGTTGTAATAATATAGGGG+TGG 0.574813 4_4:+66864740 None:intergenic
AATCTGAGGCAAACCTCTTG+GGG 0.574961 4_4:+66861604 None:intergenic
ATATGAAAGTGCAGCTGCAG+TGG 0.575044 4_4:+66863192 None:intergenic
AGGCACCCAATGGAGATGCA+TGG 0.577576 4_4:-66863423 Msa0696870:CDS
AGGATAAGCTTGCGTTGCAG+AGG 0.578244 4_4:-66862873 Msa0696870:CDS
GGCAAAACAAAGCACCTGAA+AGG 0.578986 4_4:+66863899 None:intergenic
AGTTATCTACCATTGGTTGG+TGG 0.579146 4_4:-66860887 Msa0696870:three_prime_UTR
AGGCAGGCAACAAAAGATGC+TGG 0.579182 4_4:-66863256 Msa0696870:CDS
TCCCAAGAAAGTGTCACCAT+TGG 0.580142 4_4:+66862972 None:intergenic
GATTCCTAGTGAGGTTGCGA+AGG 0.581066 4_4:-66861330 Msa0696870:CDS
AATCGAGTAGATTGATGTGT+CGG 0.581607 4_4:+66861382 None:intergenic
TGGTGGTGAACAGGCTCCAG+AGG 0.582066 4_4:-66861147 Msa0696870:CDS
TGGTTGAAGGCAACCACTGA+TGG 0.582430 4_4:+66863598 None:intergenic
GTCAAGAAGTGAGACAACTT+AGG 0.582791 4_4:-66861110 Msa0696870:exon
AATGGTGACACTTTCTTGGG+AGG 0.584699 4_4:-66862970 Msa0696870:CDS
CATCAGCAGTGATGAAAGGA+AGG 0.584878 4_4:+66862788 None:intergenic
ACAAAAGCACCAATTTGGCT+GGG 0.595143 4_4:+66863373 None:intergenic
ATCTATCAAGGATGTTGATG+AGG 0.595284 4_4:-66862647 Msa0696870:CDS
TGTACCTAAAGTGCAGGAGG+TGG 0.596493 4_4:-66862599 Msa0696870:CDS
GTGGTTGCCTTCAACCAGAA+AGG 0.597350 4_4:-66863592 Msa0696870:CDS
GATGCATCAGCAGTGATGAA+AGG 0.598218 4_4:+66862784 None:intergenic
CGATCGAAAGGCAGAGACAG+AGG 0.598907 4_4:+66864561 None:intergenic
GTGCGGTTGTAATAATATAG+GGG 0.600163 4_4:+66864737 None:intergenic
AGCTCGGACAACACCATCAG+TGG 0.601686 4_4:-66863611 Msa0696870:CDS
TATGAAAGTGCAGCTGCAGT+GGG 0.601744 4_4:+66863193 None:intergenic
AAGATTGTCAAGGCACCCAA+TGG 0.601896 4_4:-66863433 Msa0696870:CDS
GAAAGTTATCTACCATTGGT+TGG 0.603185 4_4:-66860890 Msa0696870:three_prime_UTR
CACCCAAAGTCTCAATACCC+AGG 0.604506 4_4:+66862440 None:intergenic
ACCTGGAGAACCTCCATCAG+AGG 0.605516 4_4:+66861169 None:intergenic
CCAATAACATCACTACCAGC+AGG 0.608458 4_4:+66863796 None:intergenic
GGGCAGGAGGAATGCCAACA+AGG 0.608917 4_4:+66861624 None:intergenic
TGCGAAGGAAATTGAAGATG+CGG 0.608991 4_4:-66861315 Msa0696870:CDS
ATTGGTCAGCATATGTCAGG+TGG 0.609221 4_4:-66861206 Msa0696870:CDS
AGAGACAGTAACAATCCCAT+TGG 0.610713 4_4:+66861559 None:intergenic
GGTTGTAATAATATAGGGGT+GGG 0.611072 4_4:+66864741 None:intergenic
ATAGAGATTTACCGATCGAA+AGG 0.613056 4_4:+66864549 None:intergenic
GAGTCCTCCTGATGAGCGGA+TGG 0.614772 4_4:+66861499 None:intergenic
TTTCAGGTGAAAGCTACCAA+TGG 0.616098 4_4:-66862988 Msa0696870:intron
AGTGGAGGTTCCTCTGATGG+AGG 0.616462 4_4:-66861179 Msa0696870:CDS
ATATATTAACCACCAACCAA+TGG 0.616768 4_4:+66860878 None:intergenic
AGCTGACAATCAGACTCAAG+TGG 0.624033 4_4:-66861711 Msa0696870:CDS
ATGTCAGGTGGGTCAAGTGG+AGG 0.625917 4_4:-66861194 Msa0696870:CDS
ATGCTGACCAATCTTTGACA+CGG 0.628232 4_4:+66861217 None:intergenic
ACCCAAAGTCTCAATACCCA+GGG 0.628381 4_4:+66862441 None:intergenic
CTGAGAGTCCTCCTGATGAG+CGG 0.628649 4_4:+66861495 None:intergenic
TAGGGAAAAGATTCCTAGTG+AGG 0.630551 4_4:-66861339 Msa0696870:CDS
ATTACCATCCGCTCATCAGG+AGG 0.634993 4_4:-66861503 Msa0696870:CDS
CAGAGGAAGAAGCAAGATCG+CGG 0.635260 4_4:+66864578 None:intergenic
TGATAGTATTGATCTTGCAA+AGG 0.635285 4_4:-66862893 Msa0696870:CDS
TCTGATGGAGGTTCTCCAGG+TGG 0.636312 4_4:-66861167 Msa0696870:CDS
TCCAGAGGCAGAGTATGAAG+AGG 0.637119 4_4:-66861132 Msa0696870:CDS
TTGGTCAGCATATGTCAGGT+GGG 0.640684 4_4:-66861205 Msa0696870:CDS
GCTGACAATCAGACTCAAGT+GGG 0.641874 4_4:-66861710 Msa0696870:CDS
TAAGATGAAGGAAACTGCTG+AGG 0.643269 4_4:-66863344 Msa0696870:CDS
TCAAAAGTGACTTCAATCTG+AGG 0.643584 4_4:+66861590 None:intergenic
ATGTTATTGGAATTGATTTG+GGG 0.649149 4_4:-66863783 Msa0696870:CDS
ATGCTCAGAGAGATCAGGAA+AGG 0.649172 4_4:-66861433 Msa0696870:CDS
CAAAGGAGTAAATCCTGATG+AGG 0.650174 4_4:-66862548 Msa0696870:CDS
TGCGGTCTCAGATTTGAGAA+CGG 0.650827 4_4:-66861297 Msa0696870:CDS
TTTGGAAAGAGTCCTAGCAA+AGG 0.662243 4_4:-66862565 Msa0696870:CDS
TAACCTGATTGAAAGGACAA+AGG 0.662910 4_4:-66862704 Msa0696870:CDS
GGTACCCTATAAGATTGTCA+AGG 0.671230 4_4:-66863443 Msa0696870:CDS
TCGTGTACCTAAAGTGCAGG+AGG 0.674141 4_4:-66862602 Msa0696870:CDS
ATATGGGATGAACAGCAAAG+AGG 0.685497 4_4:-66863173 Msa0696870:CDS
CTTCAGGGTGGTATTCTCCG+TGG 0.686079 4_4:-66862505 Msa0696870:CDS
ATGGGATGAACAGCAAAGAG+GGG 0.688004 4_4:-66863171 Msa0696870:CDS
AGGAAGAAGCAAGATCGCGG+CGG 0.707753 4_4:+66864581 None:intergenic
GGGTATCAAGGTGCTCCAAG+GGG 0.712553 4_4:-66861690 Msa0696870:CDS
CTTACTTCAATGATGCTCAG+AGG 0.714640 4_4:-66863276 Msa0696870:CDS
ATGGGAGCAGCTCTTCAGGG+TGG 0.716807 4_4:-66862517 Msa0696870:CDS
GCAGCTCTTTAACATCACCA+CGG 0.761484 4_4:+66862488 None:intergenic
GAATGAGGTTATGAAATGTG+CGG 0.775661 4_4:+66864720 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTGTATTTTTTAGTAAA+AGG - chr4_4:66864488-66864507 Msa0696870:intron 10.0%
!! AAAATTATGAAAAATTAGAC+TGG + chr4_4:66861381-66861400 None:intergenic 15.0%
!!! TTTTTCTTAAAAACAGTTTT+TGG + chr4_4:66863386-66863405 None:intergenic 15.0%
!! ATTTAAAAATAAAATCTGCT+TGG - chr4_4:66863406-66863425 Msa0696870:CDS 15.0%
!!! TGTTGTTTTATTCAATAAAA+AGG - chr4_4:66863508-66863527 Msa0696870:CDS 15.0%
!! TACATTAAATAAATCTGAAT+AGG + chr4_4:66863688-66863707 None:intergenic 15.0%
!! TACATTAAATAAATCTGAAT+AGG + chr4_4:66863688-66863707 None:intergenic 15.0%
!! AGATGATGAAATTAATAATA+TGG - chr4_4:66864028-66864047 Msa0696870:intron 15.0%
!!! ATATTATTTTGCAATTTGAT+TGG - chr4_4:66864643-66864662 Msa0696870:five_prime_UTR 15.0%
!!! TATTTTTGTTAAACTTTTGT+CGG - chr4_4:66864675-66864694 Msa0696870:five_prime_UTR 15.0%
!! AATAATAACTGTTGATATCA+TGG - chr4_4:66861425-66861444 Msa0696870:CDS 20.0%
!!! TCCATTTTAGAAATTTCAAA+CGG - chr4_4:66862396-66862415 Msa0696870:CDS 20.0%
!! ACATAATTATTCCTAATGAT+AGG + chr4_4:66862472-66862491 None:intergenic 20.0%
!! ATTAGGAATAATTATGTAAG+TGG - chr4_4:66862475-66862494 Msa0696870:CDS 20.0%
!! TCAGATTTATTTAATGTAAC+AGG - chr4_4:66863690-66863709 Msa0696870:intron 20.0%
!! TCAGATTTATTTAATGTAAC+AGG - chr4_4:66863690-66863709 Msa0696870:intron 20.0%
!!! AATTTTGAAATCATTGTTTC+AGG - chr4_4:66863755-66863774 Msa0696870:CDS 20.0%
!!! CAAATTTTGATGATGTTATT+CGG + chr4_4:66864556-66864575 None:intergenic 20.0%
!! TTAACAGCAAAAAAAAAACA+AGG + chr4_4:66864723-66864742 None:intergenic 20.0%
!! TCTTCAATGTTTTATGAGTT+AGG - chr4_4:66861021-66861040 Msa0696870:three_prime_UTR 25.0%
!!! TTTTTTTTGTTACCGATCAT+TGG - chr4_4:66861272-66861291 Msa0696870:CDS 25.0%
!!! TTTTTTTGTTACCGATCATT+GGG - chr4_4:66861273-66861292 Msa0696870:CDS 25.0%
! TGATGTTATTGGAATTGATT+TGG - chr4_4:66861717-66861736 Msa0696870:CDS 25.0%
!! GATGTTATTGGAATTGATTT+GGG - chr4_4:66861718-66861737 Msa0696870:CDS 25.0%
!!! ATGTTATTGGAATTGATTTG+GGG - chr4_4:66861719-66861738 Msa0696870:CDS 25.0%
! CATTAAAGAAACACATGAAT+TGG + chr4_4:66861749-66861768 None:intergenic 25.0%
! CAATTCATGTGTTTCTTTAA+TGG - chr4_4:66861747-66861766 Msa0696870:intron 25.0%
!!! CTATTTCTCTTGATTACTTT+TGG - chr4_4:66861786-66861805 Msa0696870:intron 25.0%
!!! ATTACTTTTGGACATGTTTT+TGG - chr4_4:66861798-66861817 Msa0696870:intron 25.0%
!!! TAACTTTAGGATTCTGAAAA+GGG + chr4_4:66861855-66861874 None:intergenic 25.0%
!!! ATAACTTTAGGATTCTGAAA+AGG + chr4_4:66861856-66861875 None:intergenic 25.0%
! TCAGAATTCTCAATAACTTT+AGG + chr4_4:66861868-66861887 None:intergenic 25.0%
! AAAGTTATTGAGAATTCTGA+AGG - chr4_4:66861868-66861887 Msa0696870:intron 25.0%
!! TTTTGTTCTTACTAAGATGA+AGG - chr4_4:66862146-66862165 Msa0696870:intron 25.0%
!!! CTTTAGAAATTGTTTTTCCA+AGG + chr4_4:66862188-66862207 None:intergenic 25.0%
!! ACCGTTTGAAATTTCTAAAA+TGG + chr4_4:66862400-66862419 None:intergenic 25.0%
! TAATGATAGGTTAAGAAAGA+TGG + chr4_4:66862459-66862478 None:intergenic 25.0%
! ATCTTTCTTAACCTATCATT+AGG - chr4_4:66862458-66862477 Msa0696870:CDS 25.0%
!! TCACTGATAACATATTTTTC+AGG - chr4_4:66862498-66862517 Msa0696870:CDS 25.0%
!!! AGATTTTGATAATGCTTTGT+TGG - chr4_4:66862558-66862577 Msa0696870:CDS 25.0%
!!! AGAATTGTTTTCTATTTCTG+AGG - chr4_4:66863186-66863205 Msa0696870:CDS 25.0%
!!! AGTAAGATACTTTTTTTGGA+GGG + chr4_4:66863266-66863285 None:intergenic 25.0%
!!! TGTCAGTAAGATACTTTTTT+TGG + chr4_4:66863270-66863289 None:intergenic 25.0%
! AAACCAAAATAAAACCAAAC+AGG + chr4_4:66863334-66863353 None:intergenic 25.0%
! CAATAAAAAGGAAATCAAAC+AGG - chr4_4:66863520-66863539 Msa0696870:CDS 25.0%
! GAAAACAAAAGAGAAATCTA+GGG + chr4_4:66863546-66863565 None:intergenic 25.0%
!!! GTAACATGTAGATTTTGAAA+AGG - chr4_4:66863604-66863623 Msa0696870:CDS 25.0%
!!! TTTTGAAAAGGAAATCAAAC+AGG - chr4_4:66863616-66863635 Msa0696870:CDS 25.0%
TGTGCGGTTGTAATAATATA+GGG + chr4_4:66860769-66860788 None:intergenic 30.0%
ATGTGCGGTTGTAATAATAT+AGG + chr4_4:66860770-66860789 None:intergenic 30.0%
TGAAGTGAAATTAGGGTTTA+GGG + chr4_4:66860821-66860840 None:intergenic 30.0%
!!! AAGAAGGGTTTAGTTTTGTT+TGG + chr4_4:66860847-66860866 None:intergenic 30.0%
!! TCTACTTTTCACATAATCTG+TGG - chr4_4:66861195-66861214 Msa0696870:CDS 30.0%
AATATACATGACCCAATGAT+CGG + chr4_4:66861287-66861306 None:intergenic 30.0%
ATTGGGTCATGTATATTTGT+TGG - chr4_4:66861290-66861309 Msa0696870:CDS 30.0%
TGATATCATGGTATCATTCA+TGG - chr4_4:66861437-66861456 Msa0696870:CDS 30.0%
CTGCAAAACAATCAAAAGAA+AGG + chr4_4:66861526-66861545 None:intergenic 30.0%
TTCATGTGTTTCTTTAATGG+AGG - chr4_4:66861750-66861769 Msa0696870:intron 30.0%
TCATGTGTTTCTTTAATGGA+GGG - chr4_4:66861751-66861770 Msa0696870:intron 30.0%
!! AAAAAGAGTATTTGTTGGGT+TGG + chr4_4:66861977-66861996 None:intergenic 30.0%
! AACCCAACAAATACTCTTTT+TGG - chr4_4:66861976-66861995 Msa0696870:intron 30.0%
!! TGCCAAAAAGAGTATTTGTT+GGG + chr4_4:66861981-66862000 None:intergenic 30.0%
AACACAAAAGGAGATGAAAA+TGG - chr4_4:66862038-66862057 Msa0696870:intron 30.0%
!! TAAGAACAAAAGCACCAATT+TGG + chr4_4:66862137-66862156 None:intergenic 30.0%
AATTTCAAACGGTGTATTTG+AGG - chr4_4:66862407-66862426 Msa0696870:CDS 30.0%
!! TGATAGTATTGATCTTGCAA+AGG - chr4_4:66862609-66862628 Msa0696870:CDS 30.0%
TGGTAAATAACCTGATTGAA+AGG - chr4_4:66862791-66862810 Msa0696870:CDS 30.0%
AACATCCTTGATAGATATGT+TGG + chr4_4:66862851-66862870 None:intergenic 30.0%
!!! GTAAGATACTTTTTTTGGAG+GGG + chr4_4:66863265-66863284 None:intergenic 30.0%
!!! CAGTAAGATACTTTTTTTGG+AGG + chr4_4:66863267-66863286 None:intergenic 30.0%
GAACCATTGTAAATAACTGA+AGG - chr4_4:66863308-66863327 Msa0696870:CDS 30.0%
GTTCACATAGAATCAGAAAA+AGG - chr4_4:66863470-66863489 Msa0696870:CDS 30.0%
TGAATAAAACAACACCTTCT+AGG + chr4_4:66863502-66863521 None:intergenic 30.0%
CGAAAACAAAAGAGAAATCT+AGG + chr4_4:66863547-66863566 None:intergenic 30.0%
GAATAGTGAATCGATAAAAC+AGG + chr4_4:66863570-66863589 None:intergenic 30.0%
ACTAATCATCACATAATTGC+TGG - chr4_4:66864441-66864460 Msa0696870:intron 30.0%
CTTTCAGCACAAACAAAAAA+TGG + chr4_4:66864597-66864616 None:intergenic 30.0%
ATATATTAACCACCAACCAA+TGG + chr4_4:66864627-66864646 None:intergenic 30.0%
GGTTGTAATAATATAGGGGT+GGG + chr4_4:66860764-66860783 None:intergenic 35.0%
GTGCGGTTGTAATAATATAG+GGG + chr4_4:66860768-66860787 None:intergenic 35.0%
GAATGAGGTTATGAAATGTG+CGG + chr4_4:66860785-66860804 None:intergenic 35.0%
!! GAAATTAGGGTTTAGGGTTT+TGG + chr4_4:66860815-66860834 None:intergenic 35.0%
GTGAAGTGAAATTAGGGTTT+AGG + chr4_4:66860822-66860841 None:intergenic 35.0%
TTGGCTGTGAAGTGAAATTA+GGG + chr4_4:66860828-66860847 None:intergenic 35.0%
TTTGGCTGTGAAGTGAAATT+AGG + chr4_4:66860829-66860848 None:intergenic 35.0%
ATAGAGAGAGAGAGAAAGAA+GGG + chr4_4:66860862-66860881 None:intergenic 35.0%
AATAGAGAGAGAGAGAAAGA+AGG + chr4_4:66860863-66860882 None:intergenic 35.0%
ATAGAGATTTACCGATCGAA+AGG + chr4_4:66860956-66860975 None:intergenic 35.0%
TGAGCAAAAATAGTGAAGTG+AGG + chr4_4:66860981-66861000 None:intergenic 35.0%
GTTCCGTGATACTATCATTT+GGG - chr4_4:66861217-66861236 Msa0696870:CDS 35.0%
AGACCCAAATGATAGTATCA+CGG + chr4_4:66861223-66861242 None:intergenic 35.0%
TAACAACCTGTCATTGAACA+TGG + chr4_4:66861344-66861363 None:intergenic 35.0%
!! TTGATTGTTTTGCAGTTGAC+AGG - chr4_4:66861531-66861550 Msa0696870:CDS 35.0%
ATCATATGCAGCTCAAAAGT+GGG - chr4_4:66861566-66861585 Msa0696870:CDS 35.0%
! TGCTTTTGTACTACAGTTCT+AGG - chr4_4:66861683-66861702 Msa0696870:CDS 35.0%
TGTTTCTTTAATGGAGGGAA+AGG - chr4_4:66861756-66861775 Msa0696870:intron 35.0%
!! GTGCCAAAAAGAGTATTTGT+TGG + chr4_4:66861982-66862001 None:intergenic 35.0%
! TTCATCTCCTTTTGTGTTTG+CGG + chr4_4:66862036-66862055 None:intergenic 35.0%
!!! CTCATTGCTGTTTTTGATCT+CGG - chr4_4:66862354-66862373 Msa0696870:intron 35.0%
GATATTCAAATGCTTTGCAC+CGG + chr4_4:66862743-66862762 None:intergenic 35.0%
TAACCTGATTGAAAGGACAA+AGG - chr4_4:66862798-66862817 Msa0696870:CDS 35.0%
AGATGCCAACATATCTATCA+AGG - chr4_4:66862843-66862862 Msa0696870:CDS 35.0%
ATCTATCAAGGATGTTGATG+AGG - chr4_4:66862855-66862874 Msa0696870:CDS 35.0%
TTGTAGGAATTGTTGTGTTG+CGG + chr4_4:66863110-66863129 None:intergenic 35.0%
AATTCCTACAAAGAAGAGTC+AGG - chr4_4:66863119-66863138 Msa0696870:CDS 35.0%
ATTACCTGACTCTTCTTTGT+AGG + chr4_4:66863126-66863145 None:intergenic 35.0%
!!! ATACTTTTTTTGGAGGGGTT+GGG + chr4_4:66863260-66863279 None:intergenic 35.0%
AGTATCTTACTGACATTCCA+AGG - chr4_4:66863275-66863294 Msa0696870:CDS 35.0%
GTATCTTACTGACATTCCAA+GGG - chr4_4:66863276-66863295 Msa0696870:CDS 35.0%
AGGCCTTCAGTTATTTACAA+TGG + chr4_4:66863314-66863333 None:intergenic 35.0%
TAAATAACTGAAGGCCTGTT+TGG - chr4_4:66863317-66863336 Msa0696870:CDS 35.0%
!!! AGGCCTGTTTGGTTTTATTT+TGG - chr4_4:66863328-66863347 Msa0696870:CDS 35.0%
GAAAAAGGATAACACCTAGA+AGG - chr4_4:66863485-66863504 Msa0696870:CDS 35.0%
TCAAAAGTGACTTCAATCTG+AGG + chr4_4:66863915-66863934 None:intergenic 35.0%
! ACTTTTGACATAGATGCCAA+TGG - chr4_4:66863927-66863946 Msa0696870:CDS 35.0%
! CTTTTGACATAGATGCCAAT+GGG - chr4_4:66863928-66863947 Msa0696870:CDS 35.0%
!! TTTTCCAGTGGATTTGTCTT+TGG + chr4_4:66863970-66863989 None:intergenic 35.0%
! AATCTGTTGTTCTTTTCCAG+TGG + chr4_4:66863982-66864001 None:intergenic 35.0%
AATCGAGTAGATTGATGTGT+CGG + chr4_4:66864123-66864142 None:intergenic 35.0%
AAAAGAGTTTGAGCGAGTAT+AGG - chr4_4:66864144-66864163 Msa0696870:intron 35.0%
AAAGAGTTTGAGCGAGTATA+GGG - chr4_4:66864145-66864164 Msa0696870:intron 35.0%
!!! TCCTTATTTTGTCGTACTGT+TGG - chr4_4:66864512-66864531 Msa0696870:intron 35.0%
TCCAACAGTACGACAAAATA+AGG + chr4_4:66864516-66864535 None:intergenic 35.0%
TGCTGAAAGTTATCTACCAT+TGG - chr4_4:66864608-66864627 Msa0696870:CDS 35.0%
GAAAGTTATCTACCATTGGT+TGG - chr4_4:66864612-66864631 Msa0696870:exon 35.0%
! GTTAAACTTTTGTCGGAGAA+AGG - chr4_4:66864682-66864701 Msa0696870:five_prime_UTR 35.0%
CGGTTGTAATAATATAGGGG+TGG + chr4_4:66860765-66860784 None:intergenic 40.0%
CTCTATTCTCCGATTCACTA+TGG - chr4_4:66860876-66860895 Msa0696870:three_prime_UTR 40.0%
TTGCATAGCGTATCAATCTG+TGG - chr4_4:66861048-66861067 Msa0696870:intron 40.0%
TGCATAGCGTATCAATCTGT+GGG - chr4_4:66861049-66861068 Msa0696870:intron 40.0%
GGTTCCGTGATACTATCATT+TGG - chr4_4:66861216-66861235 Msa0696870:CDS 40.0%
TGTGTGTTAGGGATGATGAA+AGG - chr4_4:66861246-66861265 Msa0696870:CDS 40.0%
CTGTTACCATGTTCAATGAC+AGG - chr4_4:66861335-66861354 Msa0696870:CDS 40.0%
TGGTATCATTCATGGAACAG+CGG - chr4_4:66861445-66861464 Msa0696870:CDS 40.0%
! CACTTTTGAGCTGCATATGA+TGG + chr4_4:66861567-66861586 None:intergenic 40.0%
CATCATATGCAGCTCAAAAG+TGG - chr4_4:66861565-66861584 Msa0696870:CDS 40.0%
TGCCTTTGTTCTGTACTGTA+TGG - chr4_4:66861622-66861641 Msa0696870:CDS 40.0%
TGCCATACAGTACAGAACAA+AGG + chr4_4:66861627-66861646 None:intergenic 40.0%
CTTTAATGGAGGGAAAGGTA+AGG - chr4_4:66861761-66861780 Msa0696870:intron 40.0%
!!! TTGGACATGTTTTTGGTGCA+TGG - chr4_4:66861805-66861824 Msa0696870:intron 40.0%
! AAGGGTATAAGCATTAGTCC+AGG + chr4_4:66861837-66861856 None:intergenic 40.0%
! TTGAGAATTCTGAAGGAGCT+CGG - chr4_4:66861875-66861894 Msa0696870:intron 40.0%
TTTGGCACCAAACGTTTGAT+TGG - chr4_4:66861994-66862013 Msa0696870:intron 40.0%
TGATGATCCGCAAACACAAA+AGG - chr4_4:66862026-66862045 Msa0696870:intron 40.0%
GGTACCCTATAAGATTGTCA+AGG - chr4_4:66862059-66862078 Msa0696870:intron 40.0%
GGTGCCTTGACAATCTTATA+GGG + chr4_4:66862066-66862085 None:intergenic 40.0%
!! ACAAAAGCACCAATTTGGCT+GGG + chr4_4:66862132-66862151 None:intergenic 40.0%
!! AACAAAAGCACCAATTTGGC+TGG + chr4_4:66862133-66862152 None:intergenic 40.0%
TAAGATGAAGGAAACTGCTG+AGG - chr4_4:66862158-66862177 Msa0696870:intron 40.0%
TGAGCATCATTGAAGTAAGC+TGG + chr4_4:66862225-66862244 None:intergenic 40.0%
CTTACTTCAATGATGCTCAG+AGG - chr4_4:66862226-66862245 Msa0696870:intron 40.0%
AAAGATGCTGGTAGAATTGC+CGG - chr4_4:66862258-66862277 Msa0696870:intron 40.0%
AATTCTCAGCACTTCAAGAC+CGG + chr4_4:66862280-66862299 None:intergenic 40.0%
ATATGGGATGAACAGCAAAG+AGG - chr4_4:66862329-66862348 Msa0696870:intron 40.0%
TATGGGATGAACAGCAAAGA+GGG - chr4_4:66862330-66862349 Msa0696870:intron 40.0%
!!! ATTGCTGTTTTTGATCTCGG+AGG - chr4_4:66862357-66862376 Msa0696870:intron 40.0%
! TTTCAGGTGAAAGCTACCAA+TGG - chr4_4:66862514-66862533 Msa0696870:CDS 40.0%
TACCAATGGTGACACTTTCT+TGG - chr4_4:66862528-66862547 Msa0696870:CDS 40.0%
ACCAATGGTGACACTTTCTT+GGG - chr4_4:66862529-66862548 Msa0696870:CDS 40.0%
GTTGACTAGATCGAAGTTTG+AGG - chr4_4:66862765-66862784 Msa0696870:CDS 40.0%
! TAGATCGAAGTTTGAGGCTT+TGG - chr4_4:66862771-66862790 Msa0696870:CDS 40.0%
TCTTTCAAGCAGCTCTTACA+GGG + chr4_4:66862826-66862845 None:intergenic 40.0%
ATCTTTCAAGCAGCTCTTAC+AGG + chr4_4:66862827-66862846 None:intergenic 40.0%
TTTGGAAAGAGTCCTAGCAA+AGG - chr4_4:66862937-66862956 Msa0696870:CDS 40.0%
TCAGGATTTACTCCTTTGCT+AGG + chr4_4:66862952-66862971 None:intergenic 40.0%
CAAAGGAGTAAATCCTGATG+AGG - chr4_4:66862954-66862973 Msa0696870:CDS 40.0%
TGTAGGAATTGTTGTGTTGC+GGG + chr4_4:66863109-66863128 None:intergenic 40.0%
!!! TACTTTTTTTGGAGGGGTTG+GGG + chr4_4:66863259-66863278 None:intergenic 40.0%
!!! GATACTTTTTTTGGAGGGGT+TGG + chr4_4:66863261-66863280 None:intergenic 40.0%
ATGGTTCTCTTCTTTACCCT+TGG + chr4_4:66863295-66863314 None:intergenic 40.0%
TCGCGAAAACGAGAAACTTA+GGG + chr4_4:66863642-66863661 None:intergenic 40.0%
CTTGGAGAATTTGACCTTGT+TGG - chr4_4:66863864-66863883 Msa0696870:intron 40.0%
AGAGACAGTAACAATCCCAT+TGG + chr4_4:66863946-66863965 None:intergenic 40.0%
TAGGGAAAAGATTCCTAGTG+AGG - chr4_4:66864163-66864182 Msa0696870:intron 40.0%
TGCGAAGGAAATTGAAGATG+CGG - chr4_4:66864187-66864206 Msa0696870:intron 40.0%
AACAAAGCCGTGTCAAAGAT+TGG - chr4_4:66864278-66864297 Msa0696870:intron 40.0%
ATGCTGACCAATCTTTGACA+CGG + chr4_4:66864288-66864307 None:intergenic 40.0%
! AAGATTGGTCAGCATATGTC+AGG - chr4_4:66864293-66864312 Msa0696870:intron 40.0%
GTCAAGAAGTGAGACAACTT+AGG - chr4_4:66864392-66864411 Msa0696870:intron 40.0%
! TTGCTGGAAGCATACAACAA+AGG - chr4_4:66864457-66864476 Msa0696870:intron 40.0%
! AGTTATCTACCATTGGTTGG+TGG - chr4_4:66864615-66864634 Msa0696870:exon 40.0%
!!! GGTTTTGGTAGTGACGAATG+AGG + chr4_4:66860800-66860819 None:intergenic 45.0%
! AGATCTGTGAATCTGAGACG+TGG - chr4_4:66861130-66861149 Msa0696870:CDS 45.0%
TTTGGGTCTCTGTGTGTGTT+AGG - chr4_4:66861234-66861253 Msa0696870:CDS 45.0%
TTGGGTCTCTGTGTGTGTTA+GGG - chr4_4:66861235-66861254 Msa0696870:CDS 45.0%
TGTTGGATTACCTTTGCGAC+TGG - chr4_4:66861307-66861326 Msa0696870:CDS 45.0%
AACAGTATAGCCAGTCGCAA+AGG + chr4_4:66861320-66861339 None:intergenic 45.0%
AGCTCAAAAGTGGGCAAGTT+TGG - chr4_4:66861575-66861594 Msa0696870:CDS 45.0%
! GGCAAAACAAAGCACCTGAA+AGG + chr4_4:66861606-66861625 None:intergenic 45.0%
CCAATAACATCACTACCAGC+AGG + chr4_4:66861709-66861728 None:intergenic 45.0%
! CCTGCTGGTAGTGATGTTAT+TGG - chr4_4:66861706-66861725 Msa0696870:CDS 45.0%
!! TTTGGTGCATGGTTTTTGCC+TGG - chr4_4:66861816-66861835 Msa0696870:intron 45.0%
GCACCAAACGTTTGATTGGT+AGG - chr4_4:66861998-66862017 Msa0696870:intron 45.0%
GGGTGCCTTGACAATCTTAT+AGG + chr4_4:66862067-66862086 None:intergenic 45.0%
! AAGATTGTCAAGGCACCCAA+TGG - chr4_4:66862069-66862088 Msa0696870:intron 45.0%
TCAACCCATGCATCTCCATT+GGG + chr4_4:66862087-66862106 None:intergenic 45.0%
TTCAACCCATGCATCTCCAT+TGG + chr4_4:66862088-66862107 None:intergenic 45.0%
CAGTATTCTCCCAGCCAAAT+TGG - chr4_4:66862120-66862139 Msa0696870:intron 45.0%
! TATGAAAGTGCAGCTGCAGT+GGG + chr4_4:66862312-66862331 None:intergenic 45.0%
! ATATGAAAGTGCAGCTGCAG+TGG + chr4_4:66862313-66862332 None:intergenic 45.0%
ACTGCAGCTGCACTTTCATA+TGG - chr4_4:66862312-66862331 Msa0696870:intron 45.0%
CTGCAGCTGCACTTTCATAT+GGG - chr4_4:66862313-66862332 Msa0696870:intron 45.0%
ATGGGATGAACAGCAAAGAG+GGG - chr4_4:66862331-66862350 Msa0696870:intron 45.0%
GGTTAAGAAAGATGGCAGCA+TGG + chr4_4:66862451-66862470 None:intergenic 45.0%
!! TCCCAAGAAAGTGTCACCAT+TGG + chr4_4:66862533-66862552 None:intergenic 45.0%
AATGGTGACACTTTCTTGGG+AGG - chr4_4:66862532-66862551 Msa0696870:CDS 45.0%
CATCAGCAGTGATGAAAGGA+AGG + chr4_4:66862717-66862736 None:intergenic 45.0%
GATGCATCAGCAGTGATGAA+AGG + chr4_4:66862721-66862740 None:intergenic 45.0%
TTCATCACTGCTGATGCATC+CGG - chr4_4:66862721-66862740 Msa0696870:CDS 45.0%
GTGCCTTTGTCCTTTCAATC+AGG + chr4_4:66862804-66862823 None:intergenic 45.0%
! GTTGATGAGGTTCTTCTCGT+CGG - chr4_4:66862868-66862887 Msa0696870:CDS 45.0%
GAGGTGGTTTCAGAGATCTT+TGG - chr4_4:66862919-66862938 Msa0696870:CDS 45.0%
GCAGCTCTTTAACATCACCA+CGG + chr4_4:66863017-66863036 None:intergenic 45.0%
!! ATCCCTGGGTATTGAGACTT+TGG - chr4_4:66863059-66863078 Msa0696870:intron 45.0%
!! TCCCTGGGTATTGAGACTTT+GGG - chr4_4:66863060-66863079 Msa0696870:intron 45.0%
ACCCAAAGTCTCAATACCCA+GGG + chr4_4:66863064-66863083 None:intergenic 45.0%
GGTTGGGGGAGATTTGATTA+AGG + chr4_4:66863244-66863263 None:intergenic 45.0%
!!! ACTTTTTTTGGAGGGGTTGG+GGG + chr4_4:66863258-66863277 None:intergenic 45.0%
CTCGCGAAAACGAGAAACTT+AGG + chr4_4:66863643-66863662 None:intergenic 45.0%
AGCTGACAATCAGACTCAAG+TGG - chr4_4:66863791-66863810 Msa0696870:CDS 45.0%
GCTGACAATCAGACTCAAGT+GGG - chr4_4:66863792-66863811 Msa0696870:CDS 45.0%
TCAGACTCAAGTGGGTATCA+AGG - chr4_4:66863800-66863819 Msa0696870:CDS 45.0%
! AATCTGAGGCAAACCTCTTG+GGG + chr4_4:66863901-66863920 None:intergenic 45.0%
! CAATCTGAGGCAAACCTCTT+GGG + chr4_4:66863902-66863921 None:intergenic 45.0%
! TCAATCTGAGGCAAACCTCT+TGG + chr4_4:66863903-66863922 None:intergenic 45.0%
TCTGCCAAAGACAAATCCAC+TGG - chr4_4:66863963-66863982 Msa0696870:intron 45.0%
ATGCTCAGAGAGATCAGGAA+AGG - chr4_4:66864069-66864088 Msa0696870:intron 45.0%
ATTTCCTTCGCAACCTCACT+AGG + chr4_4:66864179-66864198 None:intergenic 45.0%
TGCGGTCTCAGATTTGAGAA+CGG - chr4_4:66864205-66864224 Msa0696870:intron 45.0%
GATTTGAGAACGGCTATAGC+AGG - chr4_4:66864215-66864234 Msa0696870:intron 45.0%
ATTGGTCAGCATATGTCAGG+TGG - chr4_4:66864296-66864315 Msa0696870:intron 45.0%
TTGGTCAGCATATGTCAGGT+GGG - chr4_4:66864297-66864316 Msa0696870:intron 45.0%
CAGAGGAAGAAGCAAGATCG+CGG + chr4_4:66860927-66860946 None:intergenic 50.0%
CTCTGTCTCTGCCTTTCGAT+CGG - chr4_4:66860942-66860961 Msa0696870:three_prime_UTR 50.0%
! CAAGTTTGGCTCGACCTTTC+AGG - chr4_4:66861589-66861608 Msa0696870:CDS 50.0%
!! TACTACAGTTCTAGGCCTGC+TGG - chr4_4:66861691-66861710 Msa0696870:CDS 50.0%
TGGTTGAAGGCAACCACTGA+TGG + chr4_4:66861907-66861926 None:intergenic 50.0%
GTGGTTGCCTTCAACCAGAA+AGG - chr4_4:66861910-66861929 Msa0696870:intron 50.0%
!! CAGCTCTCCTTTCTGGTTGA+AGG + chr4_4:66861920-66861939 None:intergenic 50.0%
CAACAAGCAGCTCTCCTTTC+TGG + chr4_4:66861927-66861946 None:intergenic 50.0%
CAGAAAGGAGAGCTGCTTGT+TGG - chr4_4:66861925-66861944 Msa0696870:intron 50.0%
GCGCCTACCAATCAAACGTT+TGG + chr4_4:66862004-66862023 None:intergenic 50.0%
GAAACTGCTGAGGCATACCT+TGG - chr4_4:66862168-66862187 Msa0696870:intron 50.0%
CTTCAATGATGCTCAGAGGC+AGG - chr4_4:66862230-66862249 Msa0696870:intron 50.0%
AGGCAGGCAACAAAAGATGC+TGG - chr4_4:66862246-66862265 Msa0696870:intron 50.0%
!!! GCTGTTTTTGATCTCGGAGG+TGG - chr4_4:66862360-66862379 Msa0696870:intron 50.0%
AGGATAAGCTTGCGTTGCAG+AGG - chr4_4:66862629-66862648 Msa0696870:CDS 50.0%
ATGAGGTTCTTCTCGTCGGT+GGG - chr4_4:66862872-66862891 Msa0696870:CDS 50.0%
GACTCGTGTACCTAAAGTGC+AGG - chr4_4:66862897-66862916 Msa0696870:CDS 50.0%
TCGTGTACCTAAAGTGCAGG+AGG - chr4_4:66862900-66862919 Msa0696870:CDS 50.0%
TGTACCTAAAGTGCAGGAGG+TGG - chr4_4:66862903-66862922 Msa0696870:CDS 50.0%
GAAACCACCTCCTGCACTTT+AGG + chr4_4:66862910-66862929 None:intergenic 50.0%
TCCTGATGAGGCTGTTGCAA+TGG - chr4_4:66862966-66862985 Msa0696870:CDS 50.0%
CCTGATGAGGCTGTTGCAAT+GGG - chr4_4:66862967-66862986 Msa0696870:CDS 50.0%
GGGATAGAGGAGTGACATCT+AGG + chr4_4:66863044-66863063 None:intergenic 50.0%
AGATGTCACTCCTCTATCCC+TGG - chr4_4:66863044-66863063 Msa0696870:intron 50.0%
GATGTCACTCCTCTATCCCT+GGG - chr4_4:66863045-66863064 Msa0696870:intron 50.0%
GTCTCAATACCCAGGGATAG+AGG + chr4_4:66863057-66863076 None:intergenic 50.0%
CACCCAAAGTCTCAATACCC+AGG + chr4_4:66863065-66863084 None:intergenic 50.0%
!! CTGGGTATTGAGACTTTGGG+TGG - chr4_4:66863063-66863082 Msa0696870:intron 50.0%
! TGGGTATCAAGGTGCTCCAA+GGG - chr4_4:66863811-66863830 Msa0696870:intron 50.0%
GCTGCAGACAACAAGAGTCT+TGG - chr4_4:66863846-66863865 Msa0696870:intron 50.0%
CAGATTACCATCCGCTCATC+AGG - chr4_4:66863996-66864015 Msa0696870:intron 50.0%
ATTACCATCCGCTCATCAGG+AGG - chr4_4:66863999-66864018 Msa0696870:intron 50.0%
GTTGCATGCTCAGAGAGATC+AGG - chr4_4:66864064-66864083 Msa0696870:intron 50.0%
GATTCCTAGTGAGGTTGCGA+AGG - chr4_4:66864172-66864191 Msa0696870:intron 50.0%
CATATGTCAGGTGGGTCAAG+TGG - chr4_4:66864305-66864324 Msa0696870:intron 50.0%
TCAAGTGGAGGTTCCTCTGA+TGG - chr4_4:66864320-66864339 Msa0696870:intron 50.0%
TCCAGAGGCAGAGTATGAAG+AGG - chr4_4:66864370-66864389 Msa0696870:intron 50.0%
ACCTCTTCATACTCTGCCTC+TGG + chr4_4:66864374-66864393 None:intergenic 50.0%
AGACGGCGGCCATAGTGAAT+CGG + chr4_4:66860888-66860907 None:intergenic 55.0%
AGGAAGAAGCAAGATCGCGG+CGG + chr4_4:66860924-66860943 None:intergenic 55.0%
CGATCGAAAGGCAGAGACAG+AGG + chr4_4:66860944-66860963 None:intergenic 55.0%
AGCTCGGACAACACCATCAG+TGG - chr4_4:66861891-66861910 Msa0696870:intron 55.0%
GTTGGTTACAGCCTGACGCT+TGG + chr4_4:66861959-66861978 None:intergenic 55.0%
AGGCACCCAATGGAGATGCA+TGG - chr4_4:66862079-66862098 Msa0696870:intron 55.0%
GGCACCCAATGGAGATGCAT+GGG - chr4_4:66862080-66862099 Msa0696870:intron 55.0%
GATGAGGTTCTTCTCGTCGG+TGG - chr4_4:66862871-66862890 Msa0696870:CDS 55.0%
CCCATTGCAACAGCCTCATC+AGG + chr4_4:66862970-66862989 None:intergenic 55.0%
TGCAATGGGAGCAGCTCTTC+AGG - chr4_4:66862981-66863000 Msa0696870:CDS 55.0%
GCAATGGGAGCAGCTCTTCA+GGG - chr4_4:66862982-66863001 Msa0696870:CDS 55.0%
CTTCAGGGTGGTATTCTCCG+TGG - chr4_4:66862997-66863016 Msa0696870:intron 55.0%
! GTGGGTATCAAGGTGCTCCA+AGG - chr4_4:66863810-66863829 Msa0696870:intron 55.0%
! GGGTATCAAGGTGCTCCAAG+GGG - chr4_4:66863812-66863831 Msa0696870:intron 55.0%
CTGAGAGTCCTCCTGATGAG+CGG + chr4_4:66864010-66864029 None:intergenic 55.0%
ATGTCAGGTGGGTCAAGTGG+AGG - chr4_4:66864308-66864327 Msa0696870:intron 55.0%
AGTGGAGGTTCCTCTGATGG+AGG - chr4_4:66864323-66864342 Msa0696870:intron 55.0%
TCCTCTGATGGAGGTTCTCC+AGG - chr4_4:66864332-66864351 Msa0696870:intron 55.0%
ACCTGGAGAACCTCCATCAG+AGG + chr4_4:66864336-66864355 None:intergenic 55.0%
TCTGATGGAGGTTCTCCAGG+TGG - chr4_4:66864335-66864354 Msa0696870:intron 55.0%
! TTCTCCAGGTGGTGGTGAAC+AGG - chr4_4:66864346-66864365 Msa0696870:intron 55.0%
TGGTACACCTGCCAAGCGTC+AGG - chr4_4:66861945-66861964 Msa0696870:intron 60.0%
GTTACAGCCTGACGCTTGGC+AGG + chr4_4:66861955-66861974 None:intergenic 60.0%
ATGGGAGCAGCTCTTCAGGG+TGG - chr4_4:66862985-66863004 Msa0696870:CDS 60.0%
! GCTCCAAGGGGAGCGTGAAA+TGG - chr4_4:66863824-66863843 Msa0696870:intron 60.0%
CAGCCATTTCACGCTCCCCT+TGG + chr4_4:66863830-66863849 None:intergenic 60.0%
GGGCAGGAGGAATGCCAACA+AGG + chr4_4:66863881-66863900 None:intergenic 60.0%
TGAGGCAAACCTCTTGGGGC+AGG + chr4_4:66863897-66863916 None:intergenic 60.0%
GAGTCCTCCTGATGAGCGGA+TGG + chr4_4:66864006-66864025 None:intergenic 60.0%
GATGGAGGTTCTCCAGGTGG+TGG - chr4_4:66864338-66864357 Msa0696870:intron 60.0%
! TGGTGGTGAACAGGCTCCAG+AGG - chr4_4:66864355-66864374 Msa0696870:intron 60.0%
CAAGATCGCGGCGGAGAGCA+CGG + chr4_4:66860915-66860934 None:intergenic 65.0%
GGCATTCCTCCTGCCCCAAG+AGG - chr4_4:66863885-66863904 Msa0696870:intron 65.0%
GGCAAACCTCTTGGGGCAGG+AGG + chr4_4:66863894-66863913 None:intergenic 65.0%
GGAGCCTGTTCACCACCACC+TGG + chr4_4:66864353-66864372 None:intergenic 65.0%
! GAGAGCACGGCGCAAGACGG+CGG + chr4_4:66860902-66860921 None:intergenic 70.0%
! GCGGAGAGCACGGCGCAAGA+CGG + chr4_4:66860905-66860924 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 66860751 66864773 66860751 ID=Msa0696870;Name=Msa0696870
chr4_4 mRNA 66860751 66864773 66860751 ID=Msa0696870-mRNA-1;Parent=Msa0696870;Name=Msa0696870-mRNA-1;_AED=0.07;_eAED=0.07;_QI=144|1|1|1|0.83|0.71|7|347|675
chr4_4 exon 66860751 66861041 66860751 ID=Msa0696870-mRNA-1:exon:19506;Parent=Msa0696870-mRNA-1
chr4_4 exon 66861065 66861747 66861065 ID=Msa0696870-mRNA-1:exon:19505;Parent=Msa0696870-mRNA-1
chr4_4 exon 66862384 66863004 66862384 ID=Msa0696870-mRNA-1:exon:19504;Parent=Msa0696870-mRNA-1
chr4_4 exon 66863096 66863662 66863096 ID=Msa0696870-mRNA-1:exon:19503;Parent=Msa0696870-mRNA-1
chr4_4 exon 66863747 66863825 66863747 ID=Msa0696870-mRNA-1:exon:19502;Parent=Msa0696870-mRNA-1
chr4_4 exon 66863914 66863978 66863914 ID=Msa0696870-mRNA-1:exon:19501;Parent=Msa0696870-mRNA-1
chr4_4 exon 66864561 66864773 66864561 ID=Msa0696870-mRNA-1:exon:19500;Parent=Msa0696870-mRNA-1
chr4_4 five_prime_UTR 66864630 66864773 66864630 ID=Msa0696870-mRNA-1:five_prime_utr;Parent=Msa0696870-mRNA-1
chr4_4 CDS 66864561 66864629 66864561 ID=Msa0696870-mRNA-1:cds;Parent=Msa0696870-mRNA-1
chr4_4 CDS 66863914 66863978 66863914 ID=Msa0696870-mRNA-1:cds;Parent=Msa0696870-mRNA-1
chr4_4 CDS 66863747 66863825 66863747 ID=Msa0696870-mRNA-1:cds;Parent=Msa0696870-mRNA-1
chr4_4 CDS 66863096 66863662 66863096 ID=Msa0696870-mRNA-1:cds;Parent=Msa0696870-mRNA-1
chr4_4 CDS 66862384 66863004 66862384 ID=Msa0696870-mRNA-1:cds;Parent=Msa0696870-mRNA-1
chr4_4 CDS 66861121 66861747 66861121 ID=Msa0696870-mRNA-1:cds;Parent=Msa0696870-mRNA-1
chr4_4 three_prime_UTR 66861065 66861120 66861065 ID=Msa0696870-mRNA-1:three_prime_utr;Parent=Msa0696870-mRNA-1
chr4_4 three_prime_UTR 66860751 66861041 66860751 ID=Msa0696870-mRNA-1:three_prime_utr;Parent=Msa0696870-mRNA-1
Gene Sequence

>Msa0696870

ATGGCCGCCGTCTTGCGCCGTGCTCTCCGCCGCGATCTTGCTTCTTCCTCTGTCTCTGCCTTTCGATCGTTGACAGGCAGCACTAAGCCATCATATGCAGCTCAAAAGTGGGCAAGTTTGGCTCGACCTTTCAGTTCTAGGCCTGCTGGTAGTGATGTTATTGGAATTGATTTGGGGACTACCAATTCATGTGTTTCTTTAATGGAGGGAAAGAATCCTAAAGTTATTGAGAATTCTGAAGGAGCTCGGACAACACCATCAGTGGTTGCCTTCAACCAGAAAGGAGAGCTGCTTGTTGGTACACCTGCCAAGCGTCAGGCTGTAACCAACCCAACAAATACTCTTTTTGGCACCAAACGTTTGATTGGTAGGCGCTTTGATGATCCGCAAACACAAAAGGAGATGAAAATGGTACCCTATAAGATTGTCAAGGCACCCAATGGAGATGCATGGGTTGAAATCAATAAGCAGCAGTATTCTCCCAGCCAAATTGGTGCTTTTGTTCTTACTAAGATGAAGGAAACTGCTGAGGCATACCTTGGAAAAACAATTTCTAAAGCTGTAGTTACTGTTCCAGCTTACTTCAATGATGCTCAGAGGCAGGCAACAAAAGATGCTGGTAGAATTGCCGGTCTTGAAGTGCTGAGAATTATCAATGAGCCCACTGCAGCTGCACTTTCATATGGGATGAACAGCAAAGAGGGGCTCATTGCTGTTTTTGATCTCGGAGGTGGAACATTTGATGTGTCCATTTTAGAAATTTCAAACGGTGTATTTGAGGTGAAAGCTACCAATGGTGACACTTTCTTGGGAGGAGAAGATTTTGATAATGCTTTGTTGGACTTTCTAGTAAGTGAATTCAAGAGAACTGATAGTATTGATCTTGCAAAGGATAAGCTTGCGTTGCAGAGGCTTCGAGAAGCTGCTGAGAAAGCAAAAATAGAACTCTCTTCAACTTCACAAACTGAAATAAACCTTCCTTTCATCACTGCTGATGCATCCGGTGCAAAGCATTTGAATATCACGTTGACTAGATCGAAGTTTGAGGCTTTGGTAAATAACCTGATTGAAAGGACAAAGGCACCCTGTAAGAGCTGCTTGAAAGATGCCAACATATCTATCAAGGATGTTGATGAGGTTCTTCTCGTCGGTGGGATGACTCGTGTACCTAAAGTGCAGGAGGTGGTTTCAGAGATCTTTGGAAAGAGTCCTAGCAAAGGAGTAAATCCTGATGAGGCTGTTGCAATGGGAGCAGCTCTTCAGGGTGGTATTCTCCGTGGTGATGTTAAAGAGCTGCTACTCCTAGATGTCACTCCTCTATCCCTGGGTATTGAGACTTTGGGTGGTATCTTTACAAGATTGATCTCCCGCAACACAACAATTCCTACAAAGAAGAGTCAGGTGTTTTCGACAGCAGCTGACAATCAGACTCAAGTGGGTATCAAGGTGCTCCAAGGGGAGCGTGAAATGGCTGCAGACAACAAGAGTCTTGGAGAATTTGACCTTGTTGGCATTCCTCCTGCCCCAAGAGGTTTGCCTCAGATTGAAGTCACTTTTGACATAGATGCCAATGGGATTGTTACTGTCTCTGCCAAAGACAAATCCACTGGAAAAGAACAACAGATTACCATCCGCTCATCAGGAGGACTCTCAGATGATGAAATTAATAATATGGTCAAAGAAGCTGAGTTGCATGCTCAGAGAGATCAGGAAAGGAAAGCACTTATCGATATCAAGAATAGTGCCGACACATCAATCTACTCGATTGAAAAGAGTTTGAGCGAGTATAGGGAAAAGATTCCTAGTGAGGTTGCGAAGGAAATTGAAGATGCGGTCTCAGATTTGAGAACGGCTATAGCAGGAGAAAGTGTTGATGAAATTAAGACAAAACTTGACGCTGCAAACAAAGCCGTGTCAAAGATTGGTCAGCATATGTCAGGTGGGTCAAGTGGAGGTTCCTCTGATGGAGGTTCTCCAGGTGGTGGTGAACAGGCTCCAGAGGCAGAGTATGAAGAGGTCAAGAAGTGA
Protein sequence

>Msa0696870

MAAVLRRALRRDLASSSVSAFRSLTGSTKPSYAAQKWASLARPFSSRPAGSDVIGIDLGTTNSCVSLMEGKNPKVIENSEGARTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRRFDDPQTQKEMKMVPYKIVKAPNGDAWVEINKQQYSPSQIGAFVLTKMKETAEAYLGKTISKAVVTVPAYFNDAQRQATKDAGRIAGLEVLRIINEPTAAALSYGMNSKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVSEFKRTDSIDLAKDKLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFEALVNNLIERTKAPCKSCLKDANISIKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVAMGAALQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLISRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNKSLGEFDLVGIPPAPRGLPQIEVTFDIDANGIVTVSAKDKSTGKEQQITIRSSGGLSDDEINNMVKEAELHAQRDQERKALIDIKNSADTSIYSIEKSLSEYREKIPSEVAKEIEDAVSDLRTAIAGESVDEIKTKLDAANKAVSKIGQHMSGGSSGGSSDGGSPGGGEQAPEAEYEEVKK*