AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0616660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0616660 MtrunA17_Chr8g0376411 98.762 404 5 0 1 404 1 404 0.0 828
Msa0616660 MtrunA17_Chr3g0116801 90.580 414 18 6 1 404 1 403 0.0 734
Msa0616660 MtrunA17_Chr7g0214101 39.776 357 204 2 52 404 3 352 4.18e-89 273
Msa0616660 MtrunA17_Chr4g0009631 37.143 315 186 5 75 379 29 341 4.31e-60 199
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0616660 AT2G34590.1 83.824 408 60 2 1 404 1 406 0.0 711
Msa0616660 AT1G30120.1 82.238 411 61 5 1 404 1 406 0.0 692
Msa0616660 AT5G50850.1 40.979 327 189 1 81 403 33 359 6.54e-89 273
Msa0616660 AT1G55510.1 37.500 312 192 3 70 379 18 328 3.51e-62 204
Msa0616660 AT3G13450.1 37.419 310 191 3 72 379 26 334 1.67e-61 202

Find 150 sgRNAs with CRISPR-Local

Find 262 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGAATTTATTTGGGAAAAT+TGG 0.167844 4_2:+66641041 None:intergenic
TCAAATTATTGCCCACTTCT+AGG 0.176021 4_2:+66637680 None:intergenic
ATCAAGCCCTTCGCGTTATA+AGG 0.270745 4_2:+66638392 None:intergenic
TTCCACAATTGTTAGAGATT+TGG 0.278564 4_2:+66638567 None:intergenic
CCATTTGATCTTCACACAAT+TGG 0.288971 4_2:-66638125 Msa0616660:CDS
GTTTGGCGACCTCAGAGTTT+TGG 0.290215 4_2:-66638702 Msa0616660:CDS
TCTTCTCGTAGATCCCTTAA+AGG 0.290798 4_2:-66640890 Msa0616660:intron
GGTGAAGATGTAGGTCATTA+TGG 0.293146 4_2:-66638761 Msa0616660:CDS
AAAAGAGTGTGAATTTATTT+GGG 0.301704 4_2:+66641033 None:intergenic
AAAATTGGACGGAGAAATTA+AGG 0.304278 4_2:+66641056 None:intergenic
ATTAAGGAAGATTTATAGTT+GGG 0.315014 4_2:+66641072 None:intergenic
TCCTCCAATGTTCCGGCATA+TGG 0.329825 4_2:+66637948 None:intergenic
ACTTCGAAAGCAAAAGAAAA+AGG 0.340180 4_2:+66637774 None:intergenic
GACCTGATATCAATCACTTC+AGG 0.344966 4_2:+66638155 None:intergenic
CATCTGGGATTCTTTCCTTA+AGG 0.345545 4_2:+66638309 None:intergenic
CTTGTTGGAATCAAAGGAAT+TGG 0.351212 4_2:+66640922 None:intergenic
TAACTTACTGCAACTGCATT+AGG 0.356093 4_2:+66640652 None:intergenic
GACAGTACATACTCTTCATC+TGG 0.377897 4_2:+66638293 None:intergenic
CATTTGATCTTCACACAATT+GGG 0.378344 4_2:-66638124 Msa0616660:CDS
TGCATGCGGACGGGTGGAAT+TGG 0.378533 4_2:-66638059 Msa0616660:CDS
CCAATTGTGTGAAGATCAAA+TGG 0.384655 4_2:+66638125 None:intergenic
CTTCACGCAGGGCTTCAAAA+AGG 0.384676 4_2:+66638828 None:intergenic
GTGAAGGCATTCTCAGCAAT+AGG 0.388309 4_2:+66638674 None:intergenic
AGCAGAACACTCGCAGCGTC+TGG 0.400977 4_2:-66638465 Msa0616660:CDS
ACCCTGAAGTGATTGATATC+AGG 0.402772 4_2:-66638157 Msa0616660:CDS
CTTCTTCTTCTCTGATCCAA+TGG 0.403031 4_2:-66640978 Msa0616660:exon
GAACATGGGATTTCTACTTC+TGG 0.411008 4_2:-66638597 Msa0616660:CDS
GCCTTCACTGGAATGGGTAT+TGG 0.421709 4_2:-66638659 Msa0616660:CDS
TTACAATATTAACATATTCC+AGG 0.423683 4_2:-66638232 Msa0616660:CDS
ATGTTCATGCCCTCGATGAT+TGG 0.426525 4_2:+66638614 None:intergenic
TGTGGATGGAGATGTCTTGT+TGG 0.426811 4_2:+66641240 None:intergenic
TGAAGGCATTCTCAGCAATA+GGG 0.426997 4_2:+66638675 None:intergenic
AATGCAGTTGGGATCTAATC+AGG 0.428774 4_2:-66641266 Msa0616660:five_prime_UTR
TGTCCATTCCTCCAATGTTC+CGG 0.431474 4_2:+66637941 None:intergenic
ATGTTGAAGTGGTCTGTTAT+AGG 0.433607 4_2:-66637653 Msa0616660:three_prime_UTR
CAGCTCCTAATCCTTGGAAA+AGG 0.434829 4_2:+66640951 None:intergenic
AAGAAGAAGAATGGAAATGA+AGG 0.435118 4_2:+66641001 None:intergenic
TATCATATGTTTATCCTCTC+AGG 0.437493 4_2:-66637982 Msa0616660:CDS
TGAAGGATTGGAAGAAGAAA+TGG 0.437869 4_2:-66638810 Msa0616660:CDS
TTGAAGAAGCTGAGATGGTT+AGG 0.441077 4_2:-66638268 Msa0616660:CDS
CAAATTATTGCCCACTTCTA+GGG 0.442955 4_2:+66637681 None:intergenic
AGAAACCTAGCTGAAAAGTT+TGG 0.444574 4_2:-66638719 Msa0616660:CDS
ATTCGTGGGCCCGGTGGAGT+TGG 0.449345 4_2:-66638500 Msa0616660:CDS
ACTTCTGCAGCATCGAAACC+TGG 0.450955 4_2:-66640515 Msa0616660:CDS
CAAGCGACCATCTGAATGCC+AGG 0.452339 4_2:+66638422 None:intergenic
TGAGAGGATAAACATATGAT+AGG 0.455116 4_2:+66637984 None:intergenic
AATTAAGGAAGATTTATAGT+TGG 0.455356 4_2:+66641071 None:intergenic
ATAAATTAAATACCAATGTA+AGG 0.471889 4_2:+66637737 None:intergenic
GAGAATGCCTTCACTGGAAT+GGG 0.472536 4_2:-66638665 Msa0616660:CDS
TGAAGCCCTGCGTGAAGGAT+TGG 0.474938 4_2:-66638822 Msa0616660:CDS
AGAAGAAAGAAGTAGCTTGT+TGG 0.479080 4_2:+66640907 None:intergenic
CCGGGCCCACGAATGACAAC+TGG 0.484379 4_2:+66638509 None:intergenic
AAGTAGCTTGTTGGAATCAA+AGG 0.485368 4_2:+66640916 None:intergenic
ATTGCTGAGAATGCCTTCAC+TGG 0.485666 4_2:-66638671 Msa0616660:CDS
AGCTCCTAATCCTTGGAAAA+GGG 0.487388 4_2:+66640952 None:intergenic
CCCCTTGTTCACCAATGTCT+TGG 0.487813 4_2:+66638184 None:intergenic
AAAATACCAGTTGTCATTCG+TGG 0.488255 4_2:-66638515 Msa0616660:CDS
GGTGGAGTTGGTCGGCAACT+TGG 0.489359 4_2:-66638488 Msa0616660:CDS
GGTATTGGAGCTGCCATGAC+TGG 0.492586 4_2:-66638644 Msa0616660:CDS
CCAGTTGTCATTCGTGGGCC+CGG 0.493249 4_2:-66638509 Msa0616660:CDS
AAGTTGCCGACCAACTCCAC+CGG 0.494059 4_2:+66638490 None:intergenic
GGATCCTTGTGTTTGTGTCA+TGG 0.495221 4_2:-66638783 Msa0616660:CDS
CCTTGGAAAAGGGTTGCCAT+TGG 0.498270 4_2:+66640962 None:intergenic
GAAGTGGGCAATAATTTGAA+TGG 0.498712 4_2:-66637676 Msa0616660:three_prime_UTR
GATCCTTGTGTTTGTGTCAT+GGG 0.499148 4_2:-66638782 Msa0616660:CDS
TGCCAAGACATTGGTGAACA+AGG 0.503322 4_2:-66638186 Msa0616660:CDS
ACCACACGGTGCAATAAGTA+AGG 0.508227 4_2:+66641177 None:intergenic
ACCTGATATCAATCACTTCA+GGG 0.512110 4_2:+66638156 None:intergenic
GACACATCGGGTTCTCATAG+TGG 0.512571 4_2:-66638087 Msa0616660:CDS
AACCAAATCTCTAACAATTG+TGG 0.513777 4_2:-66638569 Msa0616660:CDS
CAAGAAAAGCAAAGTGGCGA+TGG 0.515007 4_2:-66641219 Msa0616660:five_prime_UTR
TTCTTCCAATCCTTCACGCA+GGG 0.516415 4_2:+66638817 None:intergenic
TGGAATTGGTGCTAGTTTGA+CGG 0.517447 4_2:-66638045 Msa0616660:CDS
TTCAATAAAGAAGACACATC+GGG 0.518935 4_2:-66638099 Msa0616660:CDS
TGAGAATGCCTTCACTGGAA+TGG 0.522043 4_2:-66638666 Msa0616660:CDS
GTTGGAATCAAAGGAATTGG+AGG 0.522681 4_2:+66640925 None:intergenic
GGAATGCTGCATTATACGTC+TGG 0.522811 4_2:-66638548 Msa0616660:CDS
GACTCCATATGCCGGAACAT+TGG 0.523095 4_2:-66637952 Msa0616660:CDS
GTGGAGGAGTGCATGCGGAC+GGG 0.523691 4_2:-66638068 Msa0616660:CDS
AATCATCGAGGGCATGAACA+TGG 0.528244 4_2:-66638612 Msa0616660:CDS
TTTAATTTAACAAACAAACT+AGG 0.528352 4_2:+66637826 None:intergenic
AAATACCAGTTGTCATTCGT+GGG 0.533477 4_2:-66638514 Msa0616660:CDS
AAGCTGAGATGGTTAGGCCC+GGG 0.538253 4_2:-66638262 Msa0616660:CDS
TTAAGGAAGATTTATAGTTG+GGG 0.544079 4_2:+66641073 None:intergenic
GAAGCTGAGATGGTTAGGCC+CGG 0.544271 4_2:-66638263 Msa0616660:CDS
GTGCCATTAGAAAATGCAGT+TGG 0.544689 4_2:-66641278 Msa0616660:five_prime_UTR
AGGTAACAGCTCCTAATCCT+TGG 0.545488 4_2:+66640945 None:intergenic
ATTTATTTGGGAAAATTGGA+CGG 0.546285 4_2:+66641045 None:intergenic
ACTGCAGTCACAATTTGAGC+AGG 0.546350 4_2:+66637909 None:intergenic
CATTAAGACAAAGACTAAAG+AGG 0.546890 4_2:-66641314 Msa0616660:five_prime_UTR
ATGCCGGAACATTGGAGGAA+TGG 0.546987 4_2:-66637944 Msa0616660:CDS
ATTGGAAGAAGAAATGGAAA+GGG 0.547209 4_2:-66638804 Msa0616660:CDS
GAGGAGTGCATGCGGACGGG+TGG 0.547477 4_2:-66638065 Msa0616660:CDS
GGATGGAGATGTCTTGTTGG+TGG 0.548772 4_2:+66641243 None:intergenic
TGCCATTAGAAAATGCAGTT+GGG 0.551733 4_2:-66641277 Msa0616660:five_prime_UTR
TCCAATACCCATTCCAGTGA+AGG 0.555423 4_2:+66638658 None:intergenic
TTCAACACCTTATAACGCGA+AGG 0.557324 4_2:-66638399 Msa0616660:CDS
GTGGGCCCGGTGGAGTTGGT+CGG 0.557377 4_2:-66638496 Msa0616660:CDS
GTCACTTGAAGAAGCTGAGA+TGG 0.561009 4_2:-66638273 Msa0616660:CDS
TCCATATGCCGGAACATTGG+AGG 0.562757 4_2:-66637949 Msa0616660:CDS
AGTTGCCGACCAACTCCACC+GGG 0.566918 4_2:+66638491 None:intergenic
ATCAATCCCTGGCATTCAGA+TGG 0.568464 4_2:-66638429 Msa0616660:CDS
TAAATACCAATGTAAGGTTG+CGG 0.570028 4_2:+66637743 None:intergenic
GATTGGCCTCAGACCAGTCA+TGG 0.570730 4_2:+66638631 None:intergenic
GATTGGAAGAAGAAATGGAA+AGG 0.571903 4_2:-66638805 Msa0616660:CDS
CAGTCACAATTTGAGCAGGT+TGG 0.573277 4_2:+66637913 None:intergenic
AGTGGAGGAGTGCATGCGGA+CGG 0.574301 4_2:-66638069 Msa0616660:CDS
TAATATTGTAACATGCTCCC+CGG 0.574738 4_2:+66638244 None:intergenic
CTTCTTCCAATCCTTCACGC+AGG 0.574955 4_2:+66638816 None:intergenic
CATGACATGATACCTCATCC+TGG 0.575595 4_2:+66638214 None:intergenic
GATTTGATTTCAGAGAGAAA+AGG 0.577967 4_2:-66640757 Msa0616660:intron
GTGAGCAAGACTTTGAAGAC+TGG 0.581663 4_2:-66640703 Msa0616660:CDS
TATTAACATATTCCAGGATG+AGG 0.586788 4_2:-66638226 Msa0616660:CDS
AGCTGAGATGGTTAGGCCCG+GGG 0.588499 4_2:-66638261 Msa0616660:CDS
AAAACACCGCAACCTTACAT+TGG 0.591863 4_2:-66637749 Msa0616660:three_prime_UTR
AATATTGTAACATGCTCCCC+GGG 0.594446 4_2:+66638245 None:intergenic
TCAACACCTTATAACGCGAA+GGG 0.602656 4_2:-66638398 Msa0616660:CDS
GCCAAGACATTGGTGAACAA+GGG 0.602952 4_2:-66638185 Msa0616660:CDS
TCCTTACTTATTGCACCGTG+TGG 0.607218 4_2:-66641178 Msa0616660:five_prime_UTR
TGTGTCATGGGTGAAGATGT+AGG 0.609135 4_2:-66638770 Msa0616660:CDS
TTCAGGTGAGCCCTAGAAGT+GGG 0.610227 4_2:-66637691 Msa0616660:three_prime_UTR
ATCATCGAGGGCATGAACAT+GGG 0.611161 4_2:-66638611 Msa0616660:CDS
CTTCTGCAGCATCGAAACCT+GGG 0.613569 4_2:-66640514 Msa0616660:intron
GAAGGCATTCTCAGCAATAG+GGG 0.613755 4_2:+66638676 None:intergenic
TGTTGTCAGATCTGATGCAA+AGG 0.616245 4_2:-66640725 Msa0616660:CDS
AATTTGAATGGATGTTGAAG+TGG 0.618042 4_2:-66637664 Msa0616660:three_prime_UTR
AATGTTCCGGCATATGGAGT+CGG 0.618120 4_2:+66637954 None:intergenic
ATTCAATAAAGAAGACACAT+CGG 0.620292 4_2:-66638100 Msa0616660:CDS
GATGTGCCGACTCCATATGC+CGG 0.624357 4_2:-66637960 Msa0616660:CDS
TCATTATGGAGGATCTTACA+AGG 0.628639 4_2:-66638747 Msa0616660:CDS
GTTGTCATTCGTGGGCCCGG+TGG 0.632799 4_2:-66638506 Msa0616660:CDS
CCAAGACATTGGTGAACAAG+GGG 0.632861 4_2:-66638184 Msa0616660:CDS
ACAGTACATACTCTTCATCT+GGG 0.634502 4_2:+66638294 None:intergenic
GGTCTGAGGCCAATCATCGA+GGG 0.636424 4_2:-66638623 Msa0616660:CDS
TTTCGATGCTGCAGAAGTCG+CGG 0.636745 4_2:+66640520 None:intergenic
GAGCTGCCATGACTGGTCTG+AGG 0.641109 4_2:-66638637 Msa0616660:CDS
CATGCAAGCTGCCAAGACAT+TGG 0.643386 4_2:-66638195 Msa0616660:CDS
ATTCAGGTGAGCCCTAGAAG+TGG 0.646477 4_2:-66637692 Msa0616660:three_prime_UTR
CATCCACAAGAAAAGCAAAG+TGG 0.649144 4_2:-66641225 Msa0616660:five_prime_UTR
ATGCTGCATTATACGTCTGG+AGG 0.653371 4_2:-66638545 Msa0616660:CDS
AAGCGACCATCTGAATGCCA+GGG 0.661617 4_2:+66638423 None:intergenic
TCATAGTGGAGGAGTGCATG+CGG 0.664859 4_2:-66638073 Msa0616660:CDS
GAAGATGTAGGTCATTATGG+AGG 0.665183 4_2:-66638758 Msa0616660:CDS
ACATCGGGTTCTCATAGTGG+AGG 0.676270 4_2:-66638084 Msa0616660:CDS
TGGAGTCGGCACATCCTGAG+AGG 0.680395 4_2:+66637968 None:intergenic
CTAAAGAGGTGCATAATGTG+AGG 0.680653 4_2:-66641300 Msa0616660:five_prime_UTR
TGGTCTGAGGCCAATCATCG+AGG 0.681253 4_2:-66638624 Msa0616660:CDS
AACATTGGAGGAATGGACAG+TGG 0.695713 4_2:-66637937 Msa0616660:CDS
TCACCCATGACACAAACACA+AGG 0.709163 4_2:+66638779 None:intergenic
TAGGGGTGTCCAAAACTCTG+AGG 0.714225 4_2:+66638693 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAAATTTAAGATTAATAG+CGG - chr4_2:66638863-66638882 Msa0616660:intron 10.0%
!! CCAAAAAAAAAAAAAAATAT+AGG + chr4_2:66639327-66639346 None:intergenic 10.0%
!!! CCTATATTTTTTTTTTTTTT+TGG - chr4_2:66639324-66639343 Msa0616660:intron 10.0%
!! AAAATAAAAATACATAAAGA+CGG + chr4_2:66639383-66639402 None:intergenic 10.0%
!! TCAAAAAAATAAATATTAAC+TGG - chr4_2:66639504-66639523 Msa0616660:intron 10.0%
!! TCAGAAAATAAAATAGAAAA+AGG + chr4_2:66639870-66639889 None:intergenic 15.0%
!!! TTTAATTTAACAAACAAACT+AGG + chr4_2:66641079-66641098 None:intergenic 15.0%
!! ATAAATTAAATACCAATGTA+AGG + chr4_2:66641168-66641187 None:intergenic 15.0%
!! ATTAAGGAAGATTTATAGTT+GGG + chr4_2:66637833-66637852 None:intergenic 20.0%
!! AATTAAGGAAGATTTATAGT+TGG + chr4_2:66637834-66637853 None:intergenic 20.0%
!!! AAAAGAGTGTGAATTTATTT+GGG + chr4_2:66637872-66637891 None:intergenic 20.0%
!!! AAAAAGAGTGTGAATTTATT+TGG + chr4_2:66637873-66637892 None:intergenic 20.0%
!! TAAAAAAAACGAACCTTTAA+GGG + chr4_2:66638028-66638047 None:intergenic 20.0%
!! TTAAAAAAAACGAACCTTTA+AGG + chr4_2:66638029-66638048 None:intergenic 20.0%
!!! GTTTGAAAATTGTGTTTTTT+TGG - chr4_2:66638326-66638345 Msa0616660:CDS 20.0%
!!! ATTTTTTCAATAATGTATCG+AGG + chr4_2:66638845-66638864 None:intergenic 20.0%
!! TCTCATTTATCAATATCAAA+GGG + chr4_2:66639737-66639756 None:intergenic 20.0%
!! ATCTCATTTATCAATATCAA+AGG + chr4_2:66639738-66639757 None:intergenic 20.0%
!! TTACAATATTAACATATTCC+AGG - chr4_2:66640670-66640689 Msa0616660:CDS 20.0%
!!! TGAAAATTTTCATGACTATT+TGG - chr4_2:66640890-66640909 Msa0616660:intron 20.0%
!!! CTTTGTCTTAATGTTGTTTT+TGG + chr4_2:66637581-66637600 None:intergenic 25.0%
!! AAAAATAGAACCTTTGAGAA+CGG - chr4_2:66637764-66637783 Msa0616660:three_prime_UTR 25.0%
! TTAAGGAAGATTTATAGTTG+GGG + chr4_2:66637832-66637851 None:intergenic 25.0%
! ATTTATTTGGGAAAATTGGA+CGG + chr4_2:66637860-66637879 None:intergenic 25.0%
! GTGAATTTATTTGGGAAAAT+TGG + chr4_2:66637864-66637883 None:intergenic 25.0%
!!! CGTTTTTTTTAATCGTTGAA+TGG - chr4_2:66638037-66638056 Msa0616660:CDS 25.0%
!!! GGTTTCTCTTTTAAGTTAAT+GGG - chr4_2:66638072-66638091 Msa0616660:CDS 25.0%
!!! GTTTCTCTTTTAAGTTAATG+GGG - chr4_2:66638073-66638092 Msa0616660:CDS 25.0%
! TCTTGTATTATTATTGACCA+TGG - chr4_2:66638097-66638116 Msa0616660:CDS 25.0%
! AATGAAACAAATAACATCCA+TGG + chr4_2:66638117-66638136 None:intergenic 25.0%
! AACAACATCAAATGTTTGTA+GGG + chr4_2:66638423-66638442 None:intergenic 25.0%
!! TTCAATTTTACAAAGCAGAT+AGG - chr4_2:66638580-66638599 Msa0616660:CDS 25.0%
!!! CTAATTTGTGCAGAAATTTT+TGG + chr4_2:66638974-66638993 None:intergenic 25.0%
!! TTTTATTCTTCTCTCTGATT+GGG + chr4_2:66639141-66639160 None:intergenic 25.0%
! ATTACATTTCAACTATGACT+TGG + chr4_2:66639771-66639790 None:intergenic 25.0%
!! TGTTTTGCTTTATAACCTTA+AGG - chr4_2:66640578-66640597 Msa0616660:intron 25.0%
! ATTCAATAAAGAAGACACAT+CGG - chr4_2:66640802-66640821 Msa0616660:intron 25.0%
!! GTCATGAAAATTTTCAGTAA+TGG + chr4_2:66640886-66640905 None:intergenic 25.0%
!! ACTTAATTCGGTTATCTTTT+TGG - chr4_2:66641050-66641069 Msa0616660:five_prime_UTR 25.0%
!!! GTTTGCATTTTTTTAGATTC+AGG - chr4_2:66641194-66641213 Msa0616660:five_prime_UTR 25.0%
CATTAAGACAAAGACTAAAG+AGG - chr4_2:66637588-66637607 Msa0616660:three_prime_UTR 30.0%
!!! TTGTTTTGTTTCTTACCACA+CGG + chr4_2:66637742-66637761 None:intergenic 30.0%
AAAATTGGACGGAGAAATTA+AGG + chr4_2:66637849-66637868 None:intergenic 30.0%
AAGAAGAAGAATGGAAATGA+AGG + chr4_2:66637904-66637923 None:intergenic 30.0%
AAGAAGAAGAAGAAGAAGAA+TGG + chr4_2:66637913-66637932 None:intergenic 30.0%
!! GTTGAATGGTTTTTGATTCT+GGG - chr4_2:66638051-66638070 Msa0616660:CDS 30.0%
!!! GGGTTTCTCTTTTAAGTTAA+TGG - chr4_2:66638071-66638090 Msa0616660:CDS 30.0%
! GATTTGATTTCAGAGAGAAA+AGG - chr4_2:66638145-66638164 Msa0616660:CDS 30.0%
!!! GTGTTTTTTTGGTTGTTGTT+TGG - chr4_2:66638337-66638356 Msa0616660:CDS 30.0%
ACAACATCAAATGTTTGTAG+GGG + chr4_2:66638422-66638441 None:intergenic 30.0%
GAACAACATCAAATGTTTGT+AGG + chr4_2:66638424-66638443 None:intergenic 30.0%
CTTCAATTAAGAATGACTTC+AGG - chr4_2:66638695-66638714 Msa0616660:CDS 30.0%
TCAAAACTCCCAATATGATA+CGG - chr4_2:66638819-66638838 Msa0616660:CDS 30.0%
AGTACTAATGATGTTCTCTT+TGG + chr4_2:66639024-66639043 None:intergenic 30.0%
! CTTTTATTCTTCTCTCTGAT+TGG + chr4_2:66639142-66639161 None:intergenic 30.0%
GATGTTGAGATTGAGTTAAT+CGG - chr4_2:66639251-66639270 Msa0616660:intron 30.0%
! ACACGATTCTTCACTATTTT+TGG - chr4_2:66639588-66639607 Msa0616660:intron 30.0%
!!! CTTCACTATTTTTGGAGTAT+CGG - chr4_2:66639596-66639615 Msa0616660:intron 30.0%
!!! TTCACTATTTTTGGAGTATC+GGG - chr4_2:66639597-66639616 Msa0616660:intron 30.0%
GAAAAAGGAAAAAATGTGCA+CGG + chr4_2:66639855-66639874 None:intergenic 30.0%
ATTGGAAGAAGAAATGGAAA+GGG - chr4_2:66640098-66640117 Msa0616660:intron 30.0%
AACCAAATCTCTAACAATTG+TGG - chr4_2:66640333-66640352 Msa0616660:intron 30.0%
TTCCACAATTGTTAGAGATT+TGG + chr4_2:66640338-66640357 None:intergenic 30.0%
! TCATATTTTCAATCAATCCC+TGG - chr4_2:66640462-66640481 Msa0616660:intron 30.0%
TATTAACATATTCCAGGATG+AGG - chr4_2:66640676-66640695 Msa0616660:CDS 30.0%
CATTTGATCTTCACACAATT+GGG - chr4_2:66640778-66640797 Msa0616660:intron 30.0%
TTCAATAAAGAAGACACATC+GGG - chr4_2:66640803-66640822 Msa0616660:intron 30.0%
TGAGAGGATAAACATATGAT+AGG + chr4_2:66640921-66640940 None:intergenic 30.0%
TATCATATGTTTATCCTCTC+AGG - chr4_2:66640920-66640939 Msa0616660:CDS 30.0%
CTGCAAAAACACACTTAATT+CGG - chr4_2:66641038-66641057 Msa0616660:five_prime_UTR 30.0%
ACTTCGAAAGCAAAAGAAAA+AGG + chr4_2:66641131-66641150 None:intergenic 30.0%
TAAATACCAATGTAAGGTTG+CGG + chr4_2:66641162-66641181 None:intergenic 30.0%
AATTTGAATGGATGTTGAAG+TGG - chr4_2:66641238-66641257 Msa0616660:five_prime_UTR 30.0%
TGCCATTAGAAAATGCAGTT+GGG - chr4_2:66637625-66637644 Msa0616660:three_prime_UTR 35.0%
! ATCCCAACTGCATTTTCTAA+TGG + chr4_2:66637630-66637649 None:intergenic 35.0%
CTTGTTGGAATCAAAGGAAT+TGG + chr4_2:66637983-66638002 None:intergenic 35.0%
!! AAGTAGCTTGTTGGAATCAA+AGG + chr4_2:66637989-66638008 None:intergenic 35.0%
! AGAAGAAAGAAGTAGCTTGT+TGG + chr4_2:66637998-66638017 None:intergenic 35.0%
!! CGTTGAATGGTTTTTGATTC+TGG - chr4_2:66638050-66638069 Msa0616660:CDS 35.0%
TAACTTACTGCAACTGCATT+AGG + chr4_2:66638253-66638272 None:intergenic 35.0%
CCACGCAATTACAAAAAATG+TGG + chr4_2:66638297-66638316 None:intergenic 35.0%
!!! CCACATTTTTTGTAATTGCG+TGG - chr4_2:66638294-66638313 Msa0616660:CDS 35.0%
! TGTTGTTTGGTTATAGACAC+AGG - chr4_2:66638350-66638369 Msa0616660:CDS 35.0%
AGAAACTGAGTATAACTCAC+CGG - chr4_2:66639199-66639218 Msa0616660:intron 35.0%
ATTGAGTTAATCGGTGGTAA+TGG - chr4_2:66639260-66639279 Msa0616660:intron 35.0%
!! TAAGACTGAAGTATCGTTGT+CGG - chr4_2:66639438-66639457 Msa0616660:intron 35.0%
ATCAGATATCAGATACGTGT+CGG - chr4_2:66639565-66639584 Msa0616660:intron 35.0%
!!! TCACTATTTTTGGAGTATCG+GGG - chr4_2:66639598-66639617 Msa0616660:intron 35.0%
TCACAGCTGAAAAGAAGATT+AGG - chr4_2:66639623-66639642 Msa0616660:intron 35.0%
TAGGCCAAAACAGTGAAATA+TGG - chr4_2:66639642-66639661 Msa0616660:intron 35.0%
! TAGGCCATATTTCACTGTTT+TGG + chr4_2:66639649-66639668 None:intergenic 35.0%
! GTATGCTCTTTTGATCGTAA+AGG + chr4_2:66639963-66639982 None:intergenic 35.0%
!! CAGATGTGCATTTTATTTGC+AGG - chr4_2:66640040-66640059 Msa0616660:intron 35.0%
TGAAGGATTGGAAGAAGAAA+TGG - chr4_2:66640092-66640111 Msa0616660:intron 35.0%
GATTGGAAGAAGAAATGGAA+AGG - chr4_2:66640097-66640116 Msa0616660:intron 35.0%
TCATTATGGAGGATCTTACA+AGG - chr4_2:66640155-66640174 Msa0616660:intron 35.0%
AGAAACCTAGCTGAAAAGTT+TGG - chr4_2:66640183-66640202 Msa0616660:intron 35.0%
AAAATACCAGTTGTCATTCG+TGG - chr4_2:66640387-66640406 Msa0616660:intron 35.0%
AAATACCAGTTGTCATTCGT+GGG - chr4_2:66640388-66640407 Msa0616660:intron 35.0%
CATGCTCAAAAAGAATCACA+GGG + chr4_2:66640560-66640579 None:intergenic 35.0%
ACATGCTCAAAAAGAATCAC+AGG + chr4_2:66640561-66640580 None:intergenic 35.0%
ACAGTACATACTCTTCATCT+GGG + chr4_2:66640611-66640630 None:intergenic 35.0%
TAATATTGTAACATGCTCCC+CGG + chr4_2:66640661-66640680 None:intergenic 35.0%
ACCTGATATCAATCACTTCA+GGG + chr4_2:66640749-66640768 None:intergenic 35.0%
CCAATTGTGTGAAGATCAAA+TGG + chr4_2:66640780-66640799 None:intergenic 35.0%
CCATTTGATCTTCACACAAT+TGG - chr4_2:66640777-66640796 Msa0616660:intron 35.0%
!! TGTGTTTTTGCAGTAATCAC+TGG + chr4_2:66641031-66641050 None:intergenic 35.0%
CAAATTATTGCCCACTTCTA+GGG + chr4_2:66641224-66641243 None:intergenic 35.0%
TCAAATTATTGCCCACTTCT+AGG + chr4_2:66641225-66641244 None:intergenic 35.0%
GAAGTGGGCAATAATTTGAA+TGG - chr4_2:66641226-66641245 Msa0616660:five_prime_UTR 35.0%
ATGTTGAAGTGGTCTGTTAT+AGG - chr4_2:66641249-66641268 Msa0616660:five_prime_UTR 35.0%
! CTAAAGAGGTGCATAATGTG+AGG - chr4_2:66637602-66637621 Msa0616660:three_prime_UTR 40.0%
! GTGCCATTAGAAAATGCAGT+TGG - chr4_2:66637624-66637643 Msa0616660:three_prime_UTR 40.0%
AATGCAGTTGGGATCTAATC+AGG - chr4_2:66637636-66637655 Msa0616660:three_prime_UTR 40.0%
!! CACTTTGCTTTTCTTGTGGA+TGG + chr4_2:66637679-66637698 None:intergenic 40.0%
CATCCACAAGAAAAGCAAAG+TGG - chr4_2:66637677-66637696 Msa0616660:three_prime_UTR 40.0%
!! CTCTGTTTTTCCGTTCTCAA+AGG + chr4_2:66637777-66637796 None:intergenic 40.0%
CTTCTTCTTCTCTGATCCAA+TGG - chr4_2:66637924-66637943 Msa0616660:CDS 40.0%
AGCTCCTAATCCTTGGAAAA+GGG + chr4_2:66637953-66637972 None:intergenic 40.0%
GTTGGAATCAAAGGAATTGG+AGG + chr4_2:66637980-66637999 None:intergenic 40.0%
TCTTCTCGTAGATCCCTTAA+AGG - chr4_2:66638012-66638031 Msa0616660:CDS 40.0%
TGTTGTCAGATCTGATGCAA+AGG - chr4_2:66638177-66638196 Msa0616660:CDS 40.0%
AGATAGGCTATGCTTCAATG+AGG - chr4_2:66638596-66638615 Msa0616660:CDS 40.0%
GCTTCAATGAGGAGAAGAAT+TGG - chr4_2:66638607-66638626 Msa0616660:CDS 40.0%
TATCGAGGCCGTATCATATT+GGG + chr4_2:66638830-66638849 None:intergenic 40.0%
GTTGAGATTGAGTTAATCGG+TGG - chr4_2:66639254-66639273 Msa0616660:intron 40.0%
! TACACGTATCGGAGAAGTAT+CGG + chr4_2:66639530-66639549 None:intergenic 40.0%
ACTTCTCCGATACGTGTATT+CGG - chr4_2:66639532-66639551 Msa0616660:intron 40.0%
ATACGTCCGAATACACGTAT+CGG + chr4_2:66639541-66639560 None:intergenic 40.0%
ATACGTGTATTCGGACGTAT+CGG - chr4_2:66639541-66639560 Msa0616660:intron 40.0%
GTGAAATATGGCCTAAACTG+TGG - chr4_2:66639654-66639673 Msa0616660:intron 40.0%
AAATATGGCCTAAACTGTGG+AGG - chr4_2:66639657-66639676 Msa0616660:intron 40.0%
AATATGGCCTAAACTGTGGA+GGG - chr4_2:66639658-66639677 Msa0616660:intron 40.0%
GGGTAAAATGTCTTCATGCT+GGG + chr4_2:66639717-66639736 None:intergenic 40.0%
AGGGTAAAATGTCTTCATGC+TGG + chr4_2:66639718-66639737 None:intergenic 40.0%
CAAGTCGATAGTTTCCATCT+AGG - chr4_2:66639894-66639913 Msa0616660:intron 40.0%
!! GATGTCTTGTTGTTCCTAGA+TGG + chr4_2:66639911-66639930 None:intergenic 40.0%
GATCCTTGTGTTTGTGTCAT+GGG - chr4_2:66640120-66640139 Msa0616660:intron 40.0%
GGTGAAGATGTAGGTCATTA+TGG - chr4_2:66640141-66640160 Msa0616660:intron 40.0%
GAAGATGTAGGTCATTATGG+AGG - chr4_2:66640144-66640163 Msa0616660:intron 40.0%
!! TGAAGGCATTCTCAGCAATA+GGG + chr4_2:66640230-66640249 None:intergenic 40.0%
GAACATGGGATTTCTACTTC+TGG - chr4_2:66640305-66640324 Msa0616660:intron 40.0%
TTCAACACCTTATAACGCGA+AGG - chr4_2:66640503-66640522 Msa0616660:intron 40.0%
TCAACACCTTATAACGCGAA+GGG - chr4_2:66640504-66640523 Msa0616660:intron 40.0%
! CATCTGGGATTCTTTCCTTA+AGG + chr4_2:66640596-66640615 None:intergenic 40.0%
GACAGTACATACTCTTCATC+TGG + chr4_2:66640612-66640631 None:intergenic 40.0%
TTGAAGAAGCTGAGATGGTT+AGG - chr4_2:66640634-66640653 Msa0616660:intron 40.0%
AATATTGTAACATGCTCCCC+GGG + chr4_2:66640660-66640679 None:intergenic 40.0%
ACCCTGAAGTGATTGATATC+AGG - chr4_2:66640745-66640764 Msa0616660:CDS 40.0%
GACCTGATATCAATCACTTC+AGG + chr4_2:66640750-66640769 None:intergenic 40.0%
!! TGGAATTGGTGCTAGTTTGA+CGG - chr4_2:66640857-66640876 Msa0616660:intron 40.0%
AAAACACCGCAACCTTACAT+TGG - chr4_2:66641153-66641172 Msa0616660:five_prime_UTR 40.0%
TGTGGATGGAGATGTCTTGT+TGG + chr4_2:66637665-66637684 None:intergenic 45.0%
!! TCGCCACTTTGCTTTTCTTG+TGG + chr4_2:66637683-66637702 None:intergenic 45.0%
CAAGAAAAGCAAAGTGGCGA+TGG - chr4_2:66637683-66637702 Msa0616660:three_prime_UTR 45.0%
TCCTTACTTATTGCACCGTG+TGG - chr4_2:66637724-66637743 Msa0616660:three_prime_UTR 45.0%
ACCACACGGTGCAATAAGTA+AGG + chr4_2:66637728-66637747 None:intergenic 45.0%
! GCAACCCTTTTCCAAGGATT+AGG - chr4_2:66637946-66637965 Msa0616660:CDS 45.0%
CAGCTCCTAATCCTTGGAAA+AGG + chr4_2:66637954-66637973 None:intergenic 45.0%
AGGTAACAGCTCCTAATCCT+TGG + chr4_2:66637960-66637979 None:intergenic 45.0%
! GTGAGCAAGACTTTGAAGAC+TGG - chr4_2:66638199-66638218 Msa0616660:CDS 45.0%
TTGTAGGGGAAAACATACCC+AGG + chr4_2:66638408-66638427 None:intergenic 45.0%
ATCCGTATCGTGTCAGGTAT+CGG + chr4_2:66638776-66638795 None:intergenic 45.0%
TATCGTATCCGTATCGTGTC+AGG + chr4_2:66638782-66638801 None:intergenic 45.0%
GACACGATACGGATACGATA+CGG - chr4_2:66638782-66638801 Msa0616660:CDS 45.0%
GTATCGAGGCCGTATCATAT+TGG + chr4_2:66638831-66638850 None:intergenic 45.0%
AACTGAGTATAACTCACCGG+AGG - chr4_2:66639202-66639221 Msa0616660:intron 45.0%
!! TCGGTGGTAATGGTTAGAAG+AGG - chr4_2:66639270-66639289 Msa0616660:intron 45.0%
!! CGGTGGTAATGGTTAGAAGA+GGG - chr4_2:66639271-66639290 Msa0616660:intron 45.0%
AGGGAATAGCCATCACTTAG+TGG - chr4_2:66639290-66639309 Msa0616660:intron 45.0%
ATATGGCCTAAACTGTGGAG+GGG - chr4_2:66639659-66639678 Msa0616660:intron 45.0%
TCTTTACCCCTCCACAGTTT+AGG + chr4_2:66639668-66639687 None:intergenic 45.0%
TTCTTCCAATCCTTCACGCA+GGG + chr4_2:66640088-66640107 None:intergenic 45.0%
GGATCCTTGTGTTTGTGTCA+TGG - chr4_2:66640119-66640138 Msa0616660:intron 45.0%
TCACCCATGACACAAACACA+AGG + chr4_2:66640126-66640145 None:intergenic 45.0%
TGTGTCATGGGTGAAGATGT+AGG - chr4_2:66640132-66640151 Msa0616660:intron 45.0%
!! GAAGGCATTCTCAGCAATAG+GGG + chr4_2:66640229-66640248 None:intergenic 45.0%
!! GTGAAGGCATTCTCAGCAAT+AGG + chr4_2:66640231-66640250 None:intergenic 45.0%
ATTGCTGAGAATGCCTTCAC+TGG - chr4_2:66640231-66640250 Msa0616660:intron 45.0%
TGAGAATGCCTTCACTGGAA+TGG - chr4_2:66640236-66640255 Msa0616660:intron 45.0%
GAGAATGCCTTCACTGGAAT+GGG - chr4_2:66640237-66640256 Msa0616660:intron 45.0%
TCCAATACCCATTCCAGTGA+AGG + chr4_2:66640247-66640266 None:intergenic 45.0%
ATGTTCATGCCCTCGATGAT+TGG + chr4_2:66640291-66640310 None:intergenic 45.0%
! AATCATCGAGGGCATGAACA+TGG - chr4_2:66640290-66640309 Msa0616660:intron 45.0%
! ATCATCGAGGGCATGAACAT+GGG - chr4_2:66640291-66640310 Msa0616660:intron 45.0%
GGAATGCTGCATTATACGTC+TGG - chr4_2:66640354-66640373 Msa0616660:intron 45.0%
ATGCTGCATTATACGTCTGG+AGG - chr4_2:66640357-66640376 Msa0616660:intron 45.0%
ATCAATCCCTGGCATTCAGA+TGG - chr4_2:66640473-66640492 Msa0616660:intron 45.0%
ATCAAGCCCTTCGCGTTATA+AGG + chr4_2:66640513-66640532 None:intergenic 45.0%
GTCACTTGAAGAAGCTGAGA+TGG - chr4_2:66640629-66640648 Msa0616660:intron 45.0%
CATGACATGATACCTCATCC+TGG + chr4_2:66640691-66640710 None:intergenic 45.0%
TGCCAAGACATTGGTGAACA+AGG - chr4_2:66640716-66640735 Msa0616660:CDS 45.0%
GCCAAGACATTGGTGAACAA+GGG - chr4_2:66640717-66640736 Msa0616660:CDS 45.0%
CCAAGACATTGGTGAACAAG+GGG - chr4_2:66640718-66640737 Msa0616660:CDS 45.0%
AATGTTCCGGCATATGGAGT+CGG + chr4_2:66640951-66640970 None:intergenic 45.0%
TGTCCATTCCTCCAATGTTC+CGG + chr4_2:66640964-66640983 None:intergenic 45.0%
AACATTGGAGGAATGGACAG+TGG - chr4_2:66640965-66640984 Msa0616660:exon 45.0%
CAGTCACAATTTGAGCAGGT+TGG + chr4_2:66640992-66641011 None:intergenic 45.0%
ACTGCAGTCACAATTTGAGC+AGG + chr4_2:66640996-66641015 None:intergenic 45.0%
!! CAAAAAAAAAAAAAAATATA+GGG + chr4_2:66639326-66639345 None:intergenic 5.0%
!! ACTAAAAAAAAAAAAAAAAA+CGG + chr4_2:66641275-66641294 None:intergenic 5.0%
! GGATGGAGATGTCTTGTTGG+TGG + chr4_2:66637662-66637681 None:intergenic 50.0%
CCTTGGAAAAGGGTTGCCAT+TGG + chr4_2:66637943-66637962 None:intergenic 50.0%
! CCAATGGCAACCCTTTTCCA+AGG - chr4_2:66637940-66637959 Msa0616660:CDS 50.0%
TTTCGATGCTGCAGAAGTCG+CGG + chr4_2:66638385-66638404 None:intergenic 50.0%
! ACTTCTGCAGCATCGAAACC+TGG - chr4_2:66638387-66638406 Msa0616660:CDS 50.0%
! CTTCTGCAGCATCGAAACCT+GGG - chr4_2:66638388-66638407 Msa0616660:CDS 50.0%
CTGTACGAAGCATACGCTGA+AGG + chr4_2:66638721-66638740 None:intergenic 50.0%
! GGGGCTTCATAGCTTTTCAG+TGG + chr4_2:66638755-66638774 None:intergenic 50.0%
TCCGTATCGTGTCAGGTATC+GGG + chr4_2:66638775-66638794 None:intergenic 50.0%
!! TAACTCACCGGAGGTGTTGA+TGG - chr4_2:66639211-66639230 Msa0616660:intron 50.0%
ATTGCCTCCATCAACACCTC+CGG + chr4_2:66639221-66639240 None:intergenic 50.0%
TCCTCGTCACCACTAAGTGA+TGG + chr4_2:66639302-66639321 None:intergenic 50.0%
GTCTTCATGCTGGGACGAAA+AGG + chr4_2:66639708-66639727 None:intergenic 50.0%
CTTCACGCAGGGCTTCAAAA+AGG + chr4_2:66640077-66640096 None:intergenic 50.0%
!!! CTTTTTGAAGCCCTGCGTGA+AGG - chr4_2:66640075-66640094 Msa0616660:intron 50.0%
CTTCTTCCAATCCTTCACGC+AGG + chr4_2:66640089-66640108 None:intergenic 50.0%
! GGTCGCCAAACTTTTCAGCT+AGG + chr4_2:66640191-66640210 None:intergenic 50.0%
! GTTTGGCGACCTCAGAGTTT+TGG - chr4_2:66640200-66640219 Msa0616660:intron 50.0%
!! TAGGGGTGTCCAAAACTCTG+AGG + chr4_2:66640212-66640231 None:intergenic 50.0%
GCCTTCACTGGAATGGGTAT+TGG - chr4_2:66640243-66640262 Msa0616660:intron 50.0%
AAGCGACCATCTGAATGCCA+GGG + chr4_2:66640482-66640501 None:intergenic 50.0%
CATGCAAGCTGCCAAGACAT+TGG - chr4_2:66640707-66640726 Msa0616660:CDS 50.0%
CCCCTTGTTCACCAATGTCT+TGG + chr4_2:66640721-66640740 None:intergenic 50.0%
GACACATCGGGTTCTCATAG+TGG - chr4_2:66640815-66640834 Msa0616660:intron 50.0%
ACATCGGGTTCTCATAGTGG+AGG - chr4_2:66640818-66640837 Msa0616660:intron 50.0%
! TCATAGTGGAGGAGTGCATG+CGG - chr4_2:66640829-66640848 Msa0616660:intron 50.0%
GACTCCATATGCCGGAACAT+TGG - chr4_2:66640950-66640969 Msa0616660:CDS 50.0%
TCCATATGCCGGAACATTGG+AGG - chr4_2:66640953-66640972 Msa0616660:CDS 50.0%
TCCTCCAATGTTCCGGCATA+TGG + chr4_2:66640957-66640976 None:intergenic 50.0%
ATGCCGGAACATTGGAGGAA+TGG - chr4_2:66640958-66640977 Msa0616660:CDS 50.0%
ATTCAGGTGAGCCCTAGAAG+TGG - chr4_2:66641210-66641229 Msa0616660:five_prime_UTR 50.0%
TTCAGGTGAGCCCTAGAAGT+GGG - chr4_2:66641211-66641230 Msa0616660:five_prime_UTR 50.0%
! CCGTATCGTGTCAGGTATCG+GGG + chr4_2:66638774-66638793 None:intergenic 55.0%
CCCCGATACCTGACACGATA+CGG - chr4_2:66638771-66638790 Msa0616660:CDS 55.0%
! GCCATCACTTAGTGGTGACG+AGG - chr4_2:66639298-66639317 Msa0616660:intron 55.0%
TGAAGCCCTGCGTGAAGGAT+TGG - chr4_2:66640080-66640099 Msa0616660:intron 55.0%
! GGTATTGGAGCTGCCATGAC+TGG - chr4_2:66640258-66640277 Msa0616660:intron 55.0%
!! GATTGGCCTCAGACCAGTCA+TGG + chr4_2:66640274-66640293 None:intergenic 55.0%
! TGGTCTGAGGCCAATCATCG+AGG - chr4_2:66640278-66640297 Msa0616660:intron 55.0%
! GGTCTGAGGCCAATCATCGA+GGG - chr4_2:66640279-66640298 Msa0616660:intron 55.0%
AAGTTGCCGACCAACTCCAC+CGG + chr4_2:66640415-66640434 None:intergenic 55.0%
CAAGCGACCATCTGAATGCC+AGG + chr4_2:66640483-66640502 None:intergenic 55.0%
GAAGCTGAGATGGTTAGGCC+CGG - chr4_2:66640639-66640658 Msa0616660:intron 55.0%
AAGCTGAGATGGTTAGGCCC+GGG - chr4_2:66640640-66640659 Msa0616660:intron 55.0%
!! GATGTGCCGACTCCATATGC+CGG - chr4_2:66640942-66640961 Msa0616660:CDS 55.0%
!! CTCACCGGAGGTGTTGATGG+AGG - chr4_2:66639214-66639233 Msa0616660:intron 60.0%
!! GAGCTGCCATGACTGGTCTG+AGG - chr4_2:66640265-66640284 Msa0616660:intron 60.0%
CCAGTTGTCATTCGTGGGCC+CGG - chr4_2:66640393-66640412 Msa0616660:intron 60.0%
AGTTGCCGACCAACTCCACC+GGG + chr4_2:66640414-66640433 None:intergenic 60.0%
! GGTGGAGTTGGTCGGCAACT+TGG - chr4_2:66640414-66640433 Msa0616660:intron 60.0%
AGCAGAACACTCGCAGCGTC+TGG - chr4_2:66640437-66640456 Msa0616660:intron 60.0%
AGCTGAGATGGTTAGGCCCG+GGG - chr4_2:66640641-66640660 Msa0616660:intron 60.0%
! AGTGGAGGAGTGCATGCGGA+CGG - chr4_2:66640833-66640852 Msa0616660:intron 60.0%
TGCATGCGGACGGGTGGAAT+TGG - chr4_2:66640843-66640862 Msa0616660:intron 60.0%
TGGAGTCGGCACATCCTGAG+AGG + chr4_2:66640937-66640956 None:intergenic 60.0%
CCGGGCCCACGAATGACAAC+TGG + chr4_2:66640396-66640415 None:intergenic 65.0%
GTTGTCATTCGTGGGCCCGG+TGG - chr4_2:66640396-66640415 Msa0616660:intron 65.0%
ATTCGTGGGCCCGGTGGAGT+TGG - chr4_2:66640402-66640421 Msa0616660:intron 65.0%
! GTGGAGGAGTGCATGCGGAC+GGG - chr4_2:66640834-66640853 Msa0616660:intron 65.0%
! GTGGGCCCGGTGGAGTTGGT+CGG - chr4_2:66640406-66640425 Msa0616660:intron 70.0%
! GAGGAGTGCATGCGGACGGG+TGG - chr4_2:66640837-66640856 Msa0616660:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 66637572 66641352 66637572 ID=Msa0616660;Name=Msa0616660
chr4_2 mRNA 66637572 66641352 66637572 ID=Msa0616660-mRNA-1;Parent=Msa0616660;Name=Msa0616660-mRNA-1;_AED=0.00;_eAED=0.00;_QI=371|1|1|1|1|1|4|318|404
chr4_2 exon 66637572 66638862 66637572 ID=Msa0616660-mRNA-1:exon:18973;Parent=Msa0616660-mRNA-1
chr4_2 exon 66640515 66640558 66640515 ID=Msa0616660-mRNA-1:exon:18972;Parent=Msa0616660-mRNA-1
chr4_2 exon 66640660 66640766 66640660 ID=Msa0616660-mRNA-1:exon:18971;Parent=Msa0616660-mRNA-1
chr4_2 exon 66640891 66641352 66640891 ID=Msa0616660-mRNA-1:exon:18970;Parent=Msa0616660-mRNA-1
chr4_2 five_prime_UTR 66640982 66641352 66640982 ID=Msa0616660-mRNA-1:five_prime_utr;Parent=Msa0616660-mRNA-1
chr4_2 CDS 66640891 66640981 66640891 ID=Msa0616660-mRNA-1:cds;Parent=Msa0616660-mRNA-1
chr4_2 CDS 66640660 66640766 66640660 ID=Msa0616660-mRNA-1:cds;Parent=Msa0616660-mRNA-1
chr4_2 CDS 66640515 66640558 66640515 ID=Msa0616660-mRNA-1:cds;Parent=Msa0616660-mRNA-1
chr4_2 CDS 66637890 66638862 66637890 ID=Msa0616660-mRNA-1:cds;Parent=Msa0616660-mRNA-1
chr4_2 three_prime_UTR 66637572 66637889 66637572 ID=Msa0616660-mRNA-1:three_prime_utr;Parent=Msa0616660-mRNA-1
Gene Sequence

>Msa0616660

ATGGCAACCCTTTTCCAAGGATTAGGAGCTGTTACCTCCAATTCCTTTGATTCCAACAAGCTACTTCTTTCTTCTCGTAGATCCCTTAAAGAGAGAAAAGGAAGCATTTTTGTTGTCAGATCTGATGCAAAGGTGAGCAAGACTTTGAAGACTGGTGCAGCTCGTAAGAGTGAATTGTTGATTCCTAATGCAGTTGCAACACAGGAAAGTAGTTCCGCGACTTCTGCAGCATCGAAACCTGGGCATGAACTTCTCCTTTTTGAAGCCCTGCGTGAAGGATTGGAAGAAGAAATGGAAAGGGATCCTTGTGTTTGTGTCATGGGTGAAGATGTAGGTCATTATGGAGGATCTTACAAGGTGACTAGAAACCTAGCTGAAAAGTTTGGCGACCTCAGAGTTTTGGACACCCCTATTGCTGAGAATGCCTTCACTGGAATGGGTATTGGAGCTGCCATGACTGGTCTGAGGCCAATCATCGAGGGCATGAACATGGGATTTCTACTTCTGGCATTTAACCAAATCTCTAACAATTGTGGAATGCTGCATTATACGTCTGGAGGTCAGTTTAAAATACCAGTTGTCATTCGTGGGCCCGGTGGAGTTGGTCGGCAACTTGGAGCAGAACACTCGCAGCGTCTGGAGTCATATTTTCAATCAATCCCTGGCATTCAGATGGTCGCTTGTTCAACACCTTATAACGCGAAGGGCTTGATGAAAGCTGCAATTCGAAGCGACAACCCTGTGATTCTTTTTGAGCATGTTTTGCTTTATAACCTTAAGGAAAGAATCCCAGATGAAGAGTATGTACTGTCACTTGAAGAAGCTGAGATGGTTAGGCCCGGGGAGCATGTTACAATATTAACATATTCCAGGATGAGGTATCATGTCATGCAAGCTGCCAAGACATTGGTGAACAAGGGGTATGACCCTGAAGTGATTGATATCAGGTCTTTGAAACCATTTGATCTTCACACAATTGGGAATTCAATAAAGAAGACACATCGGGTTCTCATAGTGGAGGAGTGCATGCGGACGGGTGGAATTGGTGCTAGTTTGACGGCTGCCATTACTGAAAATTTTCATGACTATTTGGATGCTCCTATCATATGTTTATCCTCTCAGGATGTGCCGACTCCATATGCCGGAACATTGGAGGAATGGACAGTGGTCCAACCTGCTCAAATTGTGACTGCAGTTGAGCAGCTCTGCCAGTGA
Protein sequence

>Msa0616660

MATLFQGLGAVTSNSFDSNKLLLSSRRSLKERKGSIFVVRSDAKVSKTLKTGAARKSELLIPNAVATQESSSATSAASKPGHELLLFEALREGLEEEMERDPCVCVMGEDVGHYGGSYKVTRNLAEKFGDLRVLDTPIAENAFTGMGIGAAMTGLRPIIEGMNMGFLLLAFNQISNNCGMLHYTSGGQFKIPVVIRGPGGVGRQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSDNPVILFEHVLLYNLKERIPDEEYVLSLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIICLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLCQ*