AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0616860

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0616860 MtrunA17_Chr8g0376411 98.515 404 6 0 1 404 1 404 0.0 826
Msa0616860 MtrunA17_Chr3g0116801 90.338 414 19 6 1 404 1 403 0.0 732
Msa0616860 MtrunA17_Chr7g0214101 39.776 357 204 2 52 404 3 352 4.60e-89 273
Msa0616860 MtrunA17_Chr4g0009631 37.143 315 186 5 75 379 29 341 4.45e-60 199
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0616860 AT2G34590.1 83.824 408 60 2 1 404 1 406 0.0 711
Msa0616860 AT1G30120.1 82.238 411 61 5 1 404 1 406 0.0 692
Msa0616860 AT5G50850.1 40.979 327 189 1 81 403 33 359 7.37e-89 273
Msa0616860 AT1G55510.1 37.500 312 192 3 70 379 18 328 4.26e-62 204
Msa0616860 AT3G13450.1 37.419 310 191 3 72 379 26 334 1.73e-61 202

Find 152 sgRNAs with CRISPR-Local

Find 265 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAAATTTCCATGACTATT+TGG 0.148797 4_2:+67120133 Msa0616860:CDS
GTGAATTTATTTGGGAAAAT+TGG 0.167844 4_2:-67117113 None:intergenic
TCAAATTATTGCCCACTTCT+AGG 0.176021 4_2:-67120465 None:intergenic
ATCAAGCCCTTCGCGTTATA+AGG 0.270745 4_2:-67119753 None:intergenic
TTCCACAATTGTTAGAGATT+TGG 0.278564 4_2:-67119578 None:intergenic
CCATTTGATCTTCACACAAT+TGG 0.288971 4_2:+67120020 Msa0616860:CDS
GTTTGGCGACCTCAGAGTTT+TGG 0.290215 4_2:+67119443 Msa0616860:CDS
TCTTCTCGTAGATCCCTTAA+AGG 0.290798 4_2:+67117261 Msa0616860:CDS
GGTGAAGATGTAGGTCATTA+TGG 0.293146 4_2:+67119384 Msa0616860:CDS
AAAAGAGTGTGAATTTATTT+GGG 0.301704 4_2:-67117121 None:intergenic
AAAATTGGACGGAGAAATTA+AGG 0.304278 4_2:-67117098 None:intergenic
ATTAAGGAAGATTTATAGTT+GGG 0.315014 4_2:-67117082 None:intergenic
AATGCAGTTGGGATCTAATT+AGG 0.319046 4_2:+67116888 Msa0616860:five_prime_UTR
TCCTCCAATGTTCCGGCATA+TGG 0.329825 4_2:-67120197 None:intergenic
ACTTCGAAAGCAAAAGAAAA+AGG 0.340180 4_2:-67120371 None:intergenic
GACCTGATATCAATCACTTC+AGG 0.344966 4_2:-67119990 None:intergenic
CATCTGGGATTCTTTCCTTA+AGG 0.345545 4_2:-67119836 None:intergenic
CTTGTTGGAATCAAAGGAAT+TGG 0.351212 4_2:-67117229 None:intergenic
TAACTTACTGCAACTGCATT+AGG 0.356093 4_2:-67117499 None:intergenic
GACAGTACATACTCTTCATC+TGG 0.377897 4_2:-67119852 None:intergenic
CATTTGATCTTCACACAATT+GGG 0.378344 4_2:+67120021 Msa0616860:CDS
TGCATGCGGACGGGTGGAAT+TGG 0.378533 4_2:+67120086 Msa0616860:CDS
CCAATTGTGTGAAGATCAAA+TGG 0.384655 4_2:-67120020 None:intergenic
CTTCACGCAGGGCTTCAAAA+AGG 0.384676 4_2:-67119317 None:intergenic
GTGAAGGCATTCTCAGCAAT+AGG 0.388309 4_2:-67119471 None:intergenic
AGCAGAACACTCGCAGCGTC+TGG 0.400977 4_2:+67119680 Msa0616860:CDS
ACCCTGAAGTGATTGATATC+AGG 0.402772 4_2:+67119988 Msa0616860:CDS
CTTCTTCTTCTCTGATCCAA+TGG 0.403031 4_2:+67117173 Msa0616860:exon
ATGTTGAAGTGGTCTGTTAT+AGG 0.405696 4_2:+67120492 Msa0616860:three_prime_UTR
GAACATGGGATTTCTACTTC+TGG 0.411008 4_2:+67119548 Msa0616860:CDS
GCCTTCACTGGAATGGGTAT+TGG 0.421709 4_2:+67119486 Msa0616860:CDS
TTACAATATTAACATATTCC+AGG 0.423683 4_2:+67119913 Msa0616860:CDS
ATGTTCATGCCCTCGATGAT+TGG 0.426525 4_2:-67119531 None:intergenic
TGTGGATGGAGATGTCTTGT+TGG 0.426811 4_2:-67116914 None:intergenic
TGAAGGCATTCTCAGCAATA+GGG 0.426997 4_2:-67119470 None:intergenic
TGTCCATTCCTCCAATGTTC+CGG 0.431474 4_2:-67120204 None:intergenic
CAGCTCCTAATCCTTGGAAA+AGG 0.434829 4_2:-67117200 None:intergenic
AAGAAGAAGAATGGAAATGA+AGG 0.435118 4_2:-67117153 None:intergenic
TATCATATGTTTATCCTCTC+AGG 0.437493 4_2:+67120163 Msa0616860:CDS
TGAAGGATTGGAAGAAGAAA+TGG 0.437869 4_2:+67119335 Msa0616860:CDS
TTGAAGAAGCTGAGATGGTT+AGG 0.441077 4_2:+67119877 Msa0616860:CDS
CAAATTATTGCCCACTTCTA+GGG 0.442955 4_2:-67120464 None:intergenic
AGAAACCTAGCTGAAAAGTT+TGG 0.444574 4_2:+67119426 Msa0616860:CDS
ATTCGTGGGCCCGGTGGAGT+TGG 0.449345 4_2:+67119645 Msa0616860:CDS
ACTTCTGCAGCATCGAAACC+TGG 0.450955 4_2:+67117636 Msa0616860:CDS
CAAGCGACCATCTGAATGCC+AGG 0.452339 4_2:-67119723 None:intergenic
TGAGAGGATAAACATATGAT+AGG 0.455116 4_2:-67120161 None:intergenic
AATTAAGGAAGATTTATAGT+TGG 0.455356 4_2:-67117083 None:intergenic
ATAAATTAAATACCAATGTA+AGG 0.471889 4_2:-67120408 None:intergenic
GAGAATGCCTTCACTGGAAT+GGG 0.472536 4_2:+67119480 Msa0616860:CDS
TGAAGCCCTGCGTGAAGGAT+TGG 0.474938 4_2:+67119323 Msa0616860:CDS
AGAAGAAAGAAGTAGCTTGT+TGG 0.479080 4_2:-67117244 None:intergenic
CCGGGCCCACGAATGACAAC+TGG 0.484379 4_2:-67119636 None:intergenic
AAGTAGCTTGTTGGAATCAA+AGG 0.485368 4_2:-67117235 None:intergenic
ATTGCTGAGAATGCCTTCAC+TGG 0.485666 4_2:+67119474 Msa0616860:CDS
AGCTCCTAATCCTTGGAAAA+GGG 0.487388 4_2:-67117199 None:intergenic
CCCCTTGTTCACCAATGTCT+TGG 0.487813 4_2:-67119961 None:intergenic
AAAATACCAGTTGTCATTCG+TGG 0.488255 4_2:+67119630 Msa0616860:CDS
GGTGGAGTTGGTCGGCAACT+TGG 0.489359 4_2:+67119657 Msa0616860:CDS
GGTATTGGAGCTGCCATGAC+TGG 0.492586 4_2:+67119501 Msa0616860:CDS
CCAGTTGTCATTCGTGGGCC+CGG 0.493249 4_2:+67119636 Msa0616860:CDS
AAGTTGCCGACCAACTCCAC+CGG 0.494059 4_2:-67119655 None:intergenic
GGATCCTTGTGTTTGTGTCA+TGG 0.495221 4_2:+67119362 Msa0616860:CDS
CCTTGGAAAAGGGTTGCCAT+TGG 0.498270 4_2:-67117189 None:intergenic
GAAGTGGGCAATAATTTGAA+TGG 0.498712 4_2:+67120469 Msa0616860:three_prime_UTR
GATCCTTGTGTTTGTGTCAT+GGG 0.499148 4_2:+67119363 Msa0616860:CDS
TGCCAAGACATTGGTGAACA+AGG 0.503322 4_2:+67119959 Msa0616860:CDS
ACCACACGGTGCAATAAGTA+AGG 0.508227 4_2:-67116977 None:intergenic
ACCTGATATCAATCACTTCA+GGG 0.512110 4_2:-67119989 None:intergenic
GACACATCGGGTTCTCATAG+TGG 0.512571 4_2:+67120058 Msa0616860:CDS
AACCAAATCTCTAACAATTG+TGG 0.513777 4_2:+67119576 Msa0616860:CDS
CAAGAAAAGCAAAGTGGCGA+TGG 0.515007 4_2:+67116935 Msa0616860:five_prime_UTR
TTCTTCCAATCCTTCACGCA+GGG 0.516415 4_2:-67119328 None:intergenic
TGGAATTGGTGCTAGTTTGA+CGG 0.517447 4_2:+67120100 Msa0616860:CDS
TTCAATAAAGAAGACACATC+GGG 0.518935 4_2:+67120046 Msa0616860:CDS
TGAGAATGCCTTCACTGGAA+TGG 0.522043 4_2:+67119479 Msa0616860:CDS
GTTGGAATCAAAGGAATTGG+AGG 0.522681 4_2:-67117226 None:intergenic
GGAATGCTGCATTATACGTC+TGG 0.522811 4_2:+67119597 Msa0616860:CDS
GACTCCATATGCCGGAACAT+TGG 0.523095 4_2:+67120193 Msa0616860:CDS
GTGGAGGAGTGCATGCGGAC+GGG 0.523691 4_2:+67120077 Msa0616860:CDS
AATCATCGAGGGCATGAACA+TGG 0.528244 4_2:+67119533 Msa0616860:CDS
TTTAATTTAACAAACAAACT+AGG 0.528352 4_2:-67120319 None:intergenic
AAATACCAGTTGTCATTCGT+GGG 0.533477 4_2:+67119631 Msa0616860:CDS
AAGCTGAGATGGTTAGGCCC+GGG 0.538253 4_2:+67119883 Msa0616860:CDS
TTAAGGAAGATTTATAGTTG+GGG 0.544079 4_2:-67117081 None:intergenic
GAAGCTGAGATGGTTAGGCC+CGG 0.544271 4_2:+67119882 Msa0616860:CDS
GTGCCATTAGAAAATGCAGT+TGG 0.544689 4_2:+67116876 Msa0616860:five_prime_UTR
AGGTAACAGCTCCTAATCCT+TGG 0.545488 4_2:-67117206 None:intergenic
ATTTATTTGGGAAAATTGGA+CGG 0.546285 4_2:-67117109 None:intergenic
ACTGCAGTCACAATTTGAGC+AGG 0.546350 4_2:-67120236 None:intergenic
CATTAAGACAAAGACTAAAG+AGG 0.546890 4_2:+67116840 Msa0616860:five_prime_UTR
ATGCCGGAACATTGGAGGAA+TGG 0.546987 4_2:+67120201 Msa0616860:CDS
ATTGGAAGAAGAAATGGAAA+GGG 0.547209 4_2:+67119341 Msa0616860:CDS
GAGGAGTGCATGCGGACGGG+TGG 0.547477 4_2:+67120080 Msa0616860:CDS
GGATGGAGATGTCTTGTTGG+TGG 0.548772 4_2:-67116911 None:intergenic
TGCCATTAGAAAATGCAGTT+GGG 0.551733 4_2:+67116877 Msa0616860:five_prime_UTR
TCCAATACCCATTCCAGTGA+AGG 0.555423 4_2:-67119487 None:intergenic
TTCAACACCTTATAACGCGA+AGG 0.557324 4_2:+67119746 Msa0616860:CDS
GTGGGCCCGGTGGAGTTGGT+CGG 0.557377 4_2:+67119649 Msa0616860:CDS
GTCACTTGAAGAAGCTGAGA+TGG 0.561009 4_2:+67119872 Msa0616860:CDS
TCCATATGCCGGAACATTGG+AGG 0.562757 4_2:+67120196 Msa0616860:CDS
AGTTGCCGACCAACTCCACC+GGG 0.566918 4_2:-67119654 None:intergenic
ATCAATCCCTGGCATTCAGA+TGG 0.568464 4_2:+67119716 Msa0616860:CDS
TAAATACCAATGTAAGGTTG+CGG 0.570028 4_2:-67120402 None:intergenic
GATTGGCCTCAGACCAGTCA+TGG 0.570730 4_2:-67119514 None:intergenic
GATTGGAAGAAGAAATGGAA+AGG 0.571903 4_2:+67119340 Msa0616860:CDS
CAGTCACAATTTGAGCAGGT+TGG 0.573277 4_2:-67120232 None:intergenic
AGTGGAGGAGTGCATGCGGA+CGG 0.574301 4_2:+67120076 Msa0616860:CDS
TAATATTGTAACATGCTCCC+CGG 0.574738 4_2:-67119901 None:intergenic
CTTCTTCCAATCCTTCACGC+AGG 0.574955 4_2:-67119329 None:intergenic
CATGACATGATACCTCATCC+TGG 0.575595 4_2:-67119931 None:intergenic
GTGAGCAAGACTTTGAAGAC+TGG 0.581663 4_2:+67117448 Msa0616860:CDS
TATTAACATATTCCAGGATG+AGG 0.586788 4_2:+67119919 Msa0616860:CDS
AGCTGAGATGGTTAGGCCCG+GGG 0.588499 4_2:+67119884 Msa0616860:CDS
TAGGAGCATCCAAATAGTCA+TGG 0.589072 4_2:-67120142 None:intergenic
AAAACACCGCAACCTTACAT+TGG 0.591863 4_2:+67120396 Msa0616860:three_prime_UTR
AATATTGTAACATGCTCCCC+GGG 0.594446 4_2:-67119900 None:intergenic
TCAACACCTTATAACGCGAA+GGG 0.602656 4_2:+67119747 Msa0616860:CDS
GCCAAGACATTGGTGAACAA+GGG 0.602952 4_2:+67119960 Msa0616860:CDS
TCCTTACTTATTGCACCGTG+TGG 0.607218 4_2:+67116976 Msa0616860:five_prime_UTR
TGTGTCATGGGTGAAGATGT+AGG 0.609135 4_2:+67119375 Msa0616860:CDS
TTCAGGTGAGCCCTAGAAGT+GGG 0.610227 4_2:+67120454 Msa0616860:three_prime_UTR
ATCATCGAGGGCATGAACAT+GGG 0.611161 4_2:+67119534 Msa0616860:CDS
CTTCTGCAGCATCGAAACCT+GGG 0.613569 4_2:+67117637 Msa0616860:CDS
GAAGGCATTCTCAGCAATAG+GGG 0.613755 4_2:-67119469 None:intergenic
TGTTGTCAGATCTGATGCAA+AGG 0.616245 4_2:+67117426 Msa0616860:CDS
AATTTGAATGGATGTTGAAG+TGG 0.618042 4_2:+67120481 Msa0616860:three_prime_UTR
AATGTTCCGGCATATGGAGT+CGG 0.618120 4_2:-67120191 None:intergenic
ATTCAATAAAGAAGACACAT+CGG 0.620292 4_2:+67120045 Msa0616860:CDS
GATGTGCCGACTCCATATGC+CGG 0.624357 4_2:+67120185 Msa0616860:CDS
TCATTATGGAGGATCTTACA+AGG 0.628639 4_2:+67119398 Msa0616860:CDS
GATTTGATTTCAGAGAGGAA+AGG 0.631325 4_2:+67117394 Msa0616860:intron
GTTGTCATTCGTGGGCCCGG+TGG 0.632799 4_2:+67119639 Msa0616860:CDS
CCAAGACATTGGTGAACAAG+GGG 0.632861 4_2:+67119961 Msa0616860:CDS
ACAGTACATACTCTTCATCT+GGG 0.634502 4_2:-67119851 None:intergenic
GGTCTGAGGCCAATCATCGA+GGG 0.636424 4_2:+67119522 Msa0616860:CDS
TTTCGATGCTGCAGAAGTCG+CGG 0.636745 4_2:-67117631 None:intergenic
GAGCTGCCATGACTGGTCTG+AGG 0.641109 4_2:+67119508 Msa0616860:CDS
CATGCAAGCTGCCAAGACAT+TGG 0.643386 4_2:+67119950 Msa0616860:CDS
ATTCAGGTGAGCCCTAGAAG+TGG 0.646477 4_2:+67120453 Msa0616860:three_prime_UTR
CATCCACAAGAAAAGCAAAG+TGG 0.649144 4_2:+67116929 Msa0616860:five_prime_UTR
ATGCTGCATTATACGTCTGG+AGG 0.653371 4_2:+67119600 Msa0616860:CDS
AAGCGACCATCTGAATGCCA+GGG 0.661617 4_2:-67119722 None:intergenic
TCATAGTGGAGGAGTGCATG+CGG 0.664859 4_2:+67120072 Msa0616860:CDS
GAAGATGTAGGTCATTATGG+AGG 0.665183 4_2:+67119387 Msa0616860:CDS
ACATCGGGTTCTCATAGTGG+AGG 0.676270 4_2:+67120061 Msa0616860:CDS
TGGAGTCGGCACATCCTGAG+AGG 0.680395 4_2:-67120177 None:intergenic
CTAAAGAGGTGCATAATGTG+AGG 0.680653 4_2:+67116854 Msa0616860:five_prime_UTR
TGGTCTGAGGCCAATCATCG+AGG 0.681253 4_2:+67119521 Msa0616860:CDS
AACATTGGAGGAATGGACAG+TGG 0.695713 4_2:+67120208 Msa0616860:CDS
TCACCCATGACACAAACACA+AGG 0.709163 4_2:-67119366 None:intergenic
TAGGGGTGTCCAAAACTCTG+AGG 0.714225 4_2:-67119452 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTTAATAATGTATCT+AGG - chr4_2:67118094-67118113 None:intergenic 10.0%
!!! ATTAAATTTAAGATTAATAG+CGG + chr4_2:67118111-67118130 Msa0616860:intron 10.0%
!! AAAATAAAAATACATAAAGA+CGG - chr4_2:67118626-67118645 None:intergenic 10.0%
!! TCAAAAAAATAAATATTAAC+TGG + chr4_2:67118746-67118765 Msa0616860:intron 10.0%
!! AACTAAAAACAAAAAAAAAA+AGG - chr4_2:67120518-67120537 None:intergenic 10.0%
!!! TTTTGAAAAATTTCTTGTAT+CGG - chr4_2:67118054-67118073 None:intergenic 15.0%
!! CTAACCAAAAAAAAAATATA+GGG - chr4_2:67118574-67118593 None:intergenic 15.0%
!! TCTAACCAAAAAAAAAATAT+AGG - chr4_2:67118575-67118594 None:intergenic 15.0%
!! TCAGAAAATAAAATAGAAAA+AGG - chr4_2:67119113-67119132 None:intergenic 15.0%
!!! TTTAATTTAACAAACAAACT+AGG - chr4_2:67120322-67120341 None:intergenic 15.0%
!! ATAAATTAAATACCAATGTA+AGG - chr4_2:67120411-67120430 None:intergenic 15.0%
!! ATTAAGGAAGATTTATAGTT+GGG - chr4_2:67117085-67117104 None:intergenic 20.0%
!! AATTAAGGAAGATTTATAGT+TGG - chr4_2:67117086-67117105 None:intergenic 20.0%
!!! AAAAGAGTGTGAATTTATTT+GGG - chr4_2:67117124-67117143 None:intergenic 20.0%
!!! AAAAAGAGTGTGAATTTATT+TGG - chr4_2:67117125-67117144 None:intergenic 20.0%
!! TAAAAAAAACGAACCTTTAA+GGG - chr4_2:67117277-67117296 None:intergenic 20.0%
!! TTAAAAAAAACGAACCTTTA+AGG - chr4_2:67117278-67117297 None:intergenic 20.0%
!!! GTTTGAAAATTGTGTTTTTT+TGG + chr4_2:67117575-67117594 Msa0616860:intron 20.0%
!! TCTCATTTATCAATATCAAA+GGG - chr4_2:67118980-67118999 None:intergenic 20.0%
!! ATCTCATTTATCAATATCAA+AGG - chr4_2:67118981-67119000 None:intergenic 20.0%
!! TTACAATATTAACATATTCC+AGG + chr4_2:67119913-67119932 Msa0616860:CDS 20.0%
!!! CTTTGTCTTAATGTTGTTTT+TGG - chr4_2:67116833-67116852 None:intergenic 25.0%
!! AAAAATAGAACCTTTGAGAA+CGG + chr4_2:67117016-67117035 Msa0616860:five_prime_UTR 25.0%
! TTAAGGAAGATTTATAGTTG+GGG - chr4_2:67117084-67117103 None:intergenic 25.0%
! ATTTATTTGGGAAAATTGGA+CGG - chr4_2:67117112-67117131 None:intergenic 25.0%
! GTGAATTTATTTGGGAAAAT+TGG - chr4_2:67117116-67117135 None:intergenic 25.0%
!!! CGTTTTTTTTAATCGTTGAA+TGG + chr4_2:67117286-67117305 Msa0616860:intron 25.0%
!!! GGTTTCTCTTTTAAGTTAAT+GGG + chr4_2:67117321-67117340 Msa0616860:intron 25.0%
!!! GTTTCTCTTTTAAGTTAATG+GGG + chr4_2:67117322-67117341 Msa0616860:intron 25.0%
! TCTTGTATTATTATTGACCA+TGG + chr4_2:67117346-67117365 Msa0616860:intron 25.0%
! AATGAAACAAATAACATCCA+TGG - chr4_2:67117366-67117385 None:intergenic 25.0%
! AACAACATCAAATGTTTGTA+GGG - chr4_2:67117672-67117691 None:intergenic 25.0%
!! TTCAATTTTACAAAGCAGAT+AGG + chr4_2:67117829-67117848 Msa0616860:intron 25.0%
!!! CTAATTTGTGCAGAAATTTT+TGG - chr4_2:67118222-67118241 None:intergenic 25.0%
!! TTTTATTCTTCTCTCTGATT+GGG - chr4_2:67118389-67118408 None:intergenic 25.0%
!!! GGAACCCTATATTTTTTTTT+TGG + chr4_2:67118567-67118586 Msa0616860:intron 25.0%
! ATTACATTTCAACTATGACT+TGG - chr4_2:67119014-67119033 None:intergenic 25.0%
!! TGTTTTGCTTTATAACCTTA+AGG + chr4_2:67119821-67119840 Msa0616860:CDS 25.0%
! ATTCAATAAAGAAGACACAT+CGG + chr4_2:67120045-67120064 Msa0616860:CDS 25.0%
! TGAAAATTTCCATGACTATT+TGG + chr4_2:67120133-67120152 Msa0616860:CDS 25.0%
!! ACTTAATTCGGTTATCTTTT+TGG + chr4_2:67120293-67120312 Msa0616860:three_prime_UTR 25.0%
!!! GTTTGCATTTTTTTAGATTC+AGG + chr4_2:67120437-67120456 Msa0616860:three_prime_UTR 25.0%
CATTAAGACAAAGACTAAAG+AGG + chr4_2:67116840-67116859 Msa0616860:five_prime_UTR 30.0%
!!! TTGTTTTGTTTCTTACCACA+CGG - chr4_2:67116994-67117013 None:intergenic 30.0%
AAAATTGGACGGAGAAATTA+AGG - chr4_2:67117101-67117120 None:intergenic 30.0%
AAGAAGAAGAATGGAAATGA+AGG - chr4_2:67117156-67117175 None:intergenic 30.0%
!! GTTGAATGGTTTTTGATTCT+GGG + chr4_2:67117300-67117319 Msa0616860:intron 30.0%
!!! GGGTTTCTCTTTTAAGTTAA+TGG + chr4_2:67117320-67117339 Msa0616860:intron 30.0%
!!! GTGTTTTTTTGGTTGTTGTT+TGG + chr4_2:67117586-67117605 Msa0616860:intron 30.0%
ACAACATCAAATGTTTGTAG+GGG - chr4_2:67117671-67117690 None:intergenic 30.0%
GAACAACATCAAATGTTTGT+AGG - chr4_2:67117673-67117692 None:intergenic 30.0%
CTTCAATTAAGAATGACTTC+AGG + chr4_2:67117944-67117963 Msa0616860:intron 30.0%
TCAAAACTCCCAATATGATA+CGG + chr4_2:67118068-67118087 Msa0616860:intron 30.0%
AGTACTAATGATGTTCTCTT+TGG - chr4_2:67118272-67118291 None:intergenic 30.0%
! CTTTTATTCTTCTCTCTGAT+TGG - chr4_2:67118390-67118409 None:intergenic 30.0%
GATGTTGAGATTGAGTTAAT+CGG + chr4_2:67118499-67118518 Msa0616860:intron 30.0%
! ACACGATTCTTCACTATTTT+TGG + chr4_2:67118830-67118849 Msa0616860:intron 30.0%
!!! CTTCACTATTTTTGGAGTAT+CGG + chr4_2:67118838-67118857 Msa0616860:intron 30.0%
!!! TTCACTATTTTTGGAGTATC+GGG + chr4_2:67118839-67118858 Msa0616860:intron 30.0%
GAAAAAGGAAAAAATGTGCA+CGG - chr4_2:67119098-67119117 None:intergenic 30.0%
ATTGGAAGAAGAAATGGAAA+GGG + chr4_2:67119341-67119360 Msa0616860:CDS 30.0%
AACCAAATCTCTAACAATTG+TGG + chr4_2:67119576-67119595 Msa0616860:CDS 30.0%
TTCCACAATTGTTAGAGATT+TGG - chr4_2:67119581-67119600 None:intergenic 30.0%
! TCATATTTTCAATCAATCCC+TGG + chr4_2:67119705-67119724 Msa0616860:CDS 30.0%
TATTAACATATTCCAGGATG+AGG + chr4_2:67119919-67119938 Msa0616860:CDS 30.0%
CATTTGATCTTCACACAATT+GGG + chr4_2:67120021-67120040 Msa0616860:CDS 30.0%
TTCAATAAAGAAGACACATC+GGG + chr4_2:67120046-67120065 Msa0616860:CDS 30.0%
! GTCATGGAAATTTTCAGTAA+TGG - chr4_2:67120129-67120148 None:intergenic 30.0%
TGAGAGGATAAACATATGAT+AGG - chr4_2:67120164-67120183 None:intergenic 30.0%
TATCATATGTTTATCCTCTC+AGG + chr4_2:67120163-67120182 Msa0616860:CDS 30.0%
CTGCAAAAACACACTTAATT+CGG + chr4_2:67120281-67120300 Msa0616860:three_prime_UTR 30.0%
ACTTCGAAAGCAAAAGAAAA+AGG - chr4_2:67120374-67120393 None:intergenic 30.0%
TAAATACCAATGTAAGGTTG+CGG - chr4_2:67120405-67120424 None:intergenic 30.0%
AATTTGAATGGATGTTGAAG+TGG + chr4_2:67120481-67120500 Msa0616860:three_prime_UTR 30.0%
TGCCATTAGAAAATGCAGTT+GGG + chr4_2:67116877-67116896 Msa0616860:five_prime_UTR 35.0%
! ATCCCAACTGCATTTTCTAA+TGG - chr4_2:67116882-67116901 None:intergenic 35.0%
AATGCAGTTGGGATCTAATT+AGG + chr4_2:67116888-67116907 Msa0616860:five_prime_UTR 35.0%
GAGAAGAAGAAGAAGAAGAA+TGG - chr4_2:67117165-67117184 None:intergenic 35.0%
CTTGTTGGAATCAAAGGAAT+TGG - chr4_2:67117232-67117251 None:intergenic 35.0%
!! AAGTAGCTTGTTGGAATCAA+AGG - chr4_2:67117238-67117257 None:intergenic 35.0%
! AGAAGAAAGAAGTAGCTTGT+TGG - chr4_2:67117247-67117266 None:intergenic 35.0%
!! CGTTGAATGGTTTTTGATTC+TGG + chr4_2:67117299-67117318 Msa0616860:intron 35.0%
!! TCACTGATTTGATTTCAGAG+AGG + chr4_2:67117389-67117408 Msa0616860:intron 35.0%
! GATTTGATTTCAGAGAGGAA+AGG + chr4_2:67117394-67117413 Msa0616860:intron 35.0%
TAACTTACTGCAACTGCATT+AGG - chr4_2:67117502-67117521 None:intergenic 35.0%
CCACGCAATTACAAAAAATG+TGG - chr4_2:67117546-67117565 None:intergenic 35.0%
!!! CCACATTTTTTGTAATTGCG+TGG + chr4_2:67117543-67117562 Msa0616860:intron 35.0%
! TGTTGTTTGGTTATAGACAC+AGG + chr4_2:67117599-67117618 Msa0616860:intron 35.0%
CACAAAGAGTTGAATCAATC+AGG - chr4_2:67117753-67117772 None:intergenic 35.0%
TATCTAGGCCGTATCATATT+GGG - chr4_2:67118079-67118098 None:intergenic 35.0%
AGAAACTGAGTATAACTCAC+CGG + chr4_2:67118447-67118466 Msa0616860:intron 35.0%
ATTGAGTTAATCGGTGGTAA+TGG + chr4_2:67118508-67118527 Msa0616860:intron 35.0%
!! TAAGACAGAAGTATCGTTGT+CGG + chr4_2:67118681-67118700 Msa0616860:intron 35.0%
ATCAGATATCAGATACGTGT+CGG + chr4_2:67118807-67118826 Msa0616860:intron 35.0%
!!! TCACTATTTTTGGAGTATCG+GGG + chr4_2:67118840-67118859 Msa0616860:intron 35.0%
TCACAGCTGAAAAGAAGATT+AGG + chr4_2:67118865-67118884 Msa0616860:intron 35.0%
TAGGCCAAAACAGTGAAATA+TGG + chr4_2:67118884-67118903 Msa0616860:intron 35.0%
! TAGGCCATATTTCACTGTTT+TGG - chr4_2:67118891-67118910 None:intergenic 35.0%
GGTAAAAATGTCTTCATGCT+GGG - chr4_2:67118959-67118978 None:intergenic 35.0%
! GTATGCTCTTTTGATCGTAA+AGG - chr4_2:67119206-67119225 None:intergenic 35.0%
!! CAGATGTGCATTTTATTTGC+AGG + chr4_2:67119283-67119302 Msa0616860:intron 35.0%
TGAAGGATTGGAAGAAGAAA+TGG + chr4_2:67119335-67119354 Msa0616860:CDS 35.0%
GATTGGAAGAAGAAATGGAA+AGG + chr4_2:67119340-67119359 Msa0616860:CDS 35.0%
TCATTATGGAGGATCTTACA+AGG + chr4_2:67119398-67119417 Msa0616860:CDS 35.0%
AGAAACCTAGCTGAAAAGTT+TGG + chr4_2:67119426-67119445 Msa0616860:CDS 35.0%
AAAATACCAGTTGTCATTCG+TGG + chr4_2:67119630-67119649 Msa0616860:CDS 35.0%
AAATACCAGTTGTCATTCGT+GGG + chr4_2:67119631-67119650 Msa0616860:CDS 35.0%
CATGCTCAAAAAGAATCACA+GGG - chr4_2:67119803-67119822 None:intergenic 35.0%
ACATGCTCAAAAAGAATCAC+AGG - chr4_2:67119804-67119823 None:intergenic 35.0%
ACAGTACATACTCTTCATCT+GGG - chr4_2:67119854-67119873 None:intergenic 35.0%
TAATATTGTAACATGCTCCC+CGG - chr4_2:67119904-67119923 None:intergenic 35.0%
ACCTGATATCAATCACTTCA+GGG - chr4_2:67119992-67120011 None:intergenic 35.0%
CCAATTGTGTGAAGATCAAA+TGG - chr4_2:67120023-67120042 None:intergenic 35.0%
CCATTTGATCTTCACACAAT+TGG + chr4_2:67120020-67120039 Msa0616860:CDS 35.0%
!! TGTGTTTTTGCAGTAATCAC+TGG - chr4_2:67120274-67120293 None:intergenic 35.0%
CAAATTATTGCCCACTTCTA+GGG - chr4_2:67120467-67120486 None:intergenic 35.0%
TCAAATTATTGCCCACTTCT+AGG - chr4_2:67120468-67120487 None:intergenic 35.0%
GAAGTGGGCAATAATTTGAA+TGG + chr4_2:67120469-67120488 Msa0616860:three_prime_UTR 35.0%
ATGTTGAAGTGGTCTGTTAT+AGG + chr4_2:67120492-67120511 Msa0616860:three_prime_UTR 35.0%
! CTAAAGAGGTGCATAATGTG+AGG + chr4_2:67116854-67116873 Msa0616860:five_prime_UTR 40.0%
! GTGCCATTAGAAAATGCAGT+TGG + chr4_2:67116876-67116895 Msa0616860:five_prime_UTR 40.0%
!! CACTTTGCTTTTCTTGTGGA+TGG - chr4_2:67116931-67116950 None:intergenic 40.0%
CATCCACAAGAAAAGCAAAG+TGG + chr4_2:67116929-67116948 Msa0616860:five_prime_UTR 40.0%
!! CTCTGTTTTTCCGTTCTCAA+AGG - chr4_2:67117029-67117048 None:intergenic 40.0%
CTTCTTCTTCTCTGATCCAA+TGG + chr4_2:67117173-67117192 Msa0616860:exon 40.0%
AGCTCCTAATCCTTGGAAAA+GGG - chr4_2:67117202-67117221 None:intergenic 40.0%
GTTGGAATCAAAGGAATTGG+AGG - chr4_2:67117229-67117248 None:intergenic 40.0%
TCTTCTCGTAGATCCCTTAA+AGG + chr4_2:67117261-67117280 Msa0616860:CDS 40.0%
TGTTGTCAGATCTGATGCAA+AGG + chr4_2:67117426-67117445 Msa0616860:CDS 40.0%
AGATAGGCTATGCTTCAATG+AGG + chr4_2:67117845-67117864 Msa0616860:intron 40.0%
GCTTCAATGAGGAGAAGAAT+TGG + chr4_2:67117856-67117875 Msa0616860:intron 40.0%
GTATCTAGGCCGTATCATAT+TGG - chr4_2:67118080-67118099 None:intergenic 40.0%
GTTGAGATTGAGTTAATCGG+TGG + chr4_2:67118502-67118521 Msa0616860:intron 40.0%
! TACACGTATCGGAGAAGTAT+CGG - chr4_2:67118772-67118791 None:intergenic 40.0%
ACTTCTCCGATACGTGTATT+CGG + chr4_2:67118774-67118793 Msa0616860:intron 40.0%
ATACGTCCGAATACACGTAT+CGG - chr4_2:67118783-67118802 None:intergenic 40.0%
ATACGTGTATTCGGACGTAT+CGG + chr4_2:67118783-67118802 Msa0616860:intron 40.0%
GTGAAATATGGCCTAAACTG+TGG + chr4_2:67118896-67118915 Msa0616860:intron 40.0%
AAATATGGCCTAAACTGTGG+AGG + chr4_2:67118899-67118918 Msa0616860:intron 40.0%
AATATGGCCTAAACTGTGGA+GGG + chr4_2:67118900-67118919 Msa0616860:intron 40.0%
GGGTAAAAATGTCTTCATGC+TGG - chr4_2:67118960-67118979 None:intergenic 40.0%
CAAGTCGATAGTTTCCATCT+AGG + chr4_2:67119137-67119156 Msa0616860:intron 40.0%
!! GATGTCTTGTTGTTCCTAGA+TGG - chr4_2:67119154-67119173 None:intergenic 40.0%
GATCCTTGTGTTTGTGTCAT+GGG + chr4_2:67119363-67119382 Msa0616860:CDS 40.0%
GGTGAAGATGTAGGTCATTA+TGG + chr4_2:67119384-67119403 Msa0616860:CDS 40.0%
GAAGATGTAGGTCATTATGG+AGG + chr4_2:67119387-67119406 Msa0616860:CDS 40.0%
!! TGAAGGCATTCTCAGCAATA+GGG - chr4_2:67119473-67119492 None:intergenic 40.0%
GAACATGGGATTTCTACTTC+TGG + chr4_2:67119548-67119567 Msa0616860:CDS 40.0%
TTCAACACCTTATAACGCGA+AGG + chr4_2:67119746-67119765 Msa0616860:CDS 40.0%
TCAACACCTTATAACGCGAA+GGG + chr4_2:67119747-67119766 Msa0616860:CDS 40.0%
! CATCTGGGATTCTTTCCTTA+AGG - chr4_2:67119839-67119858 None:intergenic 40.0%
GACAGTACATACTCTTCATC+TGG - chr4_2:67119855-67119874 None:intergenic 40.0%
TTGAAGAAGCTGAGATGGTT+AGG + chr4_2:67119877-67119896 Msa0616860:CDS 40.0%
AATATTGTAACATGCTCCCC+GGG - chr4_2:67119903-67119922 None:intergenic 40.0%
ACCCTGAAGTGATTGATATC+AGG + chr4_2:67119988-67120007 Msa0616860:CDS 40.0%
GACCTGATATCAATCACTTC+AGG - chr4_2:67119993-67120012 None:intergenic 40.0%
!! TGGAATTGGTGCTAGTTTGA+CGG + chr4_2:67120100-67120119 Msa0616860:CDS 40.0%
!! TAGGAGCATCCAAATAGTCA+TGG - chr4_2:67120145-67120164 None:intergenic 40.0%
AAAACACCGCAACCTTACAT+TGG + chr4_2:67120396-67120415 Msa0616860:three_prime_UTR 40.0%
TGTGGATGGAGATGTCTTGT+TGG - chr4_2:67116917-67116936 None:intergenic 45.0%
!! TCGCCACTTTGCTTTTCTTG+TGG - chr4_2:67116935-67116954 None:intergenic 45.0%
CAAGAAAAGCAAAGTGGCGA+TGG + chr4_2:67116935-67116954 Msa0616860:five_prime_UTR 45.0%
TCCTTACTTATTGCACCGTG+TGG + chr4_2:67116976-67116995 Msa0616860:five_prime_UTR 45.0%
ACCACACGGTGCAATAAGTA+AGG - chr4_2:67116980-67116999 None:intergenic 45.0%
! GCAACCCTTTTCCAAGGATT+AGG + chr4_2:67117195-67117214 Msa0616860:CDS 45.0%
CAGCTCCTAATCCTTGGAAA+AGG - chr4_2:67117203-67117222 None:intergenic 45.0%
AGGTAACAGCTCCTAATCCT+TGG - chr4_2:67117209-67117228 None:intergenic 45.0%
! GTGAGCAAGACTTTGAAGAC+TGG + chr4_2:67117448-67117467 Msa0616860:CDS 45.0%
TTGTAGGGGAAAACATACCC+AGG - chr4_2:67117657-67117676 None:intergenic 45.0%
ATCCGTATCGTGTCAGGTAT+CGG - chr4_2:67118025-67118044 None:intergenic 45.0%
TATCGTATCCGTATCGTGTC+AGG - chr4_2:67118031-67118050 None:intergenic 45.0%
AACTGAGTATAACTCACCGG+AGG + chr4_2:67118450-67118469 Msa0616860:intron 45.0%
!! TCGGTGGTAATGGTTAGAAG+AGG + chr4_2:67118518-67118537 Msa0616860:intron 45.0%
!! CGGTGGTAATGGTTAGAAGA+GGG + chr4_2:67118519-67118538 Msa0616860:intron 45.0%
AGGGAATAGCCATCACTTAG+TGG + chr4_2:67118538-67118557 Msa0616860:intron 45.0%
ATATGGCCTAAACTGTGGAG+GGG + chr4_2:67118901-67118920 Msa0616860:intron 45.0%
TCTTTACCCCTCCACAGTTT+AGG - chr4_2:67118910-67118929 None:intergenic 45.0%
TTCTTCCAATCCTTCACGCA+GGG - chr4_2:67119331-67119350 None:intergenic 45.0%
GGATCCTTGTGTTTGTGTCA+TGG + chr4_2:67119362-67119381 Msa0616860:CDS 45.0%
TCACCCATGACACAAACACA+AGG - chr4_2:67119369-67119388 None:intergenic 45.0%
TGTGTCATGGGTGAAGATGT+AGG + chr4_2:67119375-67119394 Msa0616860:CDS 45.0%
!! GAAGGCATTCTCAGCAATAG+GGG - chr4_2:67119472-67119491 None:intergenic 45.0%
!! GTGAAGGCATTCTCAGCAAT+AGG - chr4_2:67119474-67119493 None:intergenic 45.0%
ATTGCTGAGAATGCCTTCAC+TGG + chr4_2:67119474-67119493 Msa0616860:CDS 45.0%
TGAGAATGCCTTCACTGGAA+TGG + chr4_2:67119479-67119498 Msa0616860:CDS 45.0%
GAGAATGCCTTCACTGGAAT+GGG + chr4_2:67119480-67119499 Msa0616860:CDS 45.0%
TCCAATACCCATTCCAGTGA+AGG - chr4_2:67119490-67119509 None:intergenic 45.0%
ATGTTCATGCCCTCGATGAT+TGG - chr4_2:67119534-67119553 None:intergenic 45.0%
! AATCATCGAGGGCATGAACA+TGG + chr4_2:67119533-67119552 Msa0616860:CDS 45.0%
! ATCATCGAGGGCATGAACAT+GGG + chr4_2:67119534-67119553 Msa0616860:CDS 45.0%
GGAATGCTGCATTATACGTC+TGG + chr4_2:67119597-67119616 Msa0616860:CDS 45.0%
ATGCTGCATTATACGTCTGG+AGG + chr4_2:67119600-67119619 Msa0616860:CDS 45.0%
ATCAATCCCTGGCATTCAGA+TGG + chr4_2:67119716-67119735 Msa0616860:CDS 45.0%
ATCAAGCCCTTCGCGTTATA+AGG - chr4_2:67119756-67119775 None:intergenic 45.0%
GTCACTTGAAGAAGCTGAGA+TGG + chr4_2:67119872-67119891 Msa0616860:CDS 45.0%
CATGACATGATACCTCATCC+TGG - chr4_2:67119934-67119953 None:intergenic 45.0%
TGCCAAGACATTGGTGAACA+AGG + chr4_2:67119959-67119978 Msa0616860:CDS 45.0%
GCCAAGACATTGGTGAACAA+GGG + chr4_2:67119960-67119979 Msa0616860:CDS 45.0%
CCAAGACATTGGTGAACAAG+GGG + chr4_2:67119961-67119980 Msa0616860:CDS 45.0%
AATGTTCCGGCATATGGAGT+CGG - chr4_2:67120194-67120213 None:intergenic 45.0%
TGTCCATTCCTCCAATGTTC+CGG - chr4_2:67120207-67120226 None:intergenic 45.0%
AACATTGGAGGAATGGACAG+TGG + chr4_2:67120208-67120227 Msa0616860:CDS 45.0%
CAGTCACAATTTGAGCAGGT+TGG - chr4_2:67120235-67120254 None:intergenic 45.0%
ACTGCAGTCACAATTTGAGC+AGG - chr4_2:67120239-67120258 None:intergenic 45.0%
! GGATGGAGATGTCTTGTTGG+TGG - chr4_2:67116914-67116933 None:intergenic 50.0%
CCTTGGAAAAGGGTTGCCAT+TGG - chr4_2:67117192-67117211 None:intergenic 50.0%
! CCAATGGCAACCCTTTTCCA+AGG + chr4_2:67117189-67117208 Msa0616860:exon 50.0%
TTTCGATGCTGCAGAAGTCG+CGG - chr4_2:67117634-67117653 None:intergenic 50.0%
! ACTTCTGCAGCATCGAAACC+TGG + chr4_2:67117636-67117655 Msa0616860:CDS 50.0%
! CTTCTGCAGCATCGAAACCT+GGG + chr4_2:67117637-67117656 Msa0616860:CDS 50.0%
CTGTACGAAGCATACGCTGA+AGG - chr4_2:67117970-67117989 None:intergenic 50.0%
! GGGGCTTCATAGCTTTTCAG+TGG - chr4_2:67118004-67118023 None:intergenic 50.0%
TCCGTATCGTGTCAGGTATC+GGG - chr4_2:67118024-67118043 None:intergenic 50.0%
!! TAACTCACCGGAGGTGTTGA+TGG + chr4_2:67118459-67118478 Msa0616860:intron 50.0%
ATTGCCTCCATCAACACCTC+CGG - chr4_2:67118469-67118488 None:intergenic 50.0%
TCCTCGTCACCACTAAGTGA+TGG - chr4_2:67118550-67118569 None:intergenic 50.0%
GTCTTCATGCTGGGACGAAA+AGG - chr4_2:67118950-67118969 None:intergenic 50.0%
CTTCACGCAGGGCTTCAAAA+AGG - chr4_2:67119320-67119339 None:intergenic 50.0%
!!! CTTTTTGAAGCCCTGCGTGA+AGG + chr4_2:67119318-67119337 Msa0616860:CDS 50.0%
CTTCTTCCAATCCTTCACGC+AGG - chr4_2:67119332-67119351 None:intergenic 50.0%
! GGTCGCCAAACTTTTCAGCT+AGG - chr4_2:67119434-67119453 None:intergenic 50.0%
! GTTTGGCGACCTCAGAGTTT+TGG + chr4_2:67119443-67119462 Msa0616860:CDS 50.0%
!! TAGGGGTGTCCAAAACTCTG+AGG - chr4_2:67119455-67119474 None:intergenic 50.0%
GCCTTCACTGGAATGGGTAT+TGG + chr4_2:67119486-67119505 Msa0616860:CDS 50.0%
AAGCGACCATCTGAATGCCA+GGG - chr4_2:67119725-67119744 None:intergenic 50.0%
CATGCAAGCTGCCAAGACAT+TGG + chr4_2:67119950-67119969 Msa0616860:CDS 50.0%
CCCCTTGTTCACCAATGTCT+TGG - chr4_2:67119964-67119983 None:intergenic 50.0%
GACACATCGGGTTCTCATAG+TGG + chr4_2:67120058-67120077 Msa0616860:CDS 50.0%
ACATCGGGTTCTCATAGTGG+AGG + chr4_2:67120061-67120080 Msa0616860:CDS 50.0%
! TCATAGTGGAGGAGTGCATG+CGG + chr4_2:67120072-67120091 Msa0616860:CDS 50.0%
GACTCCATATGCCGGAACAT+TGG + chr4_2:67120193-67120212 Msa0616860:CDS 50.0%
TCCATATGCCGGAACATTGG+AGG + chr4_2:67120196-67120215 Msa0616860:CDS 50.0%
TCCTCCAATGTTCCGGCATA+TGG - chr4_2:67120200-67120219 None:intergenic 50.0%
ATGCCGGAACATTGGAGGAA+TGG + chr4_2:67120201-67120220 Msa0616860:CDS 50.0%
ATTCAGGTGAGCCCTAGAAG+TGG + chr4_2:67120453-67120472 Msa0616860:three_prime_UTR 50.0%
TTCAGGTGAGCCCTAGAAGT+GGG + chr4_2:67120454-67120473 Msa0616860:three_prime_UTR 50.0%
! CCGTATCGTGTCAGGTATCG+GGG - chr4_2:67118023-67118042 None:intergenic 55.0%
CCCCGATACCTGACACGATA+CGG + chr4_2:67118020-67118039 Msa0616860:intron 55.0%
! GCCATCACTTAGTGGTGACG+AGG + chr4_2:67118546-67118565 Msa0616860:intron 55.0%
TGAAGCCCTGCGTGAAGGAT+TGG + chr4_2:67119323-67119342 Msa0616860:CDS 55.0%
! GGTATTGGAGCTGCCATGAC+TGG + chr4_2:67119501-67119520 Msa0616860:CDS 55.0%
!! GATTGGCCTCAGACCAGTCA+TGG - chr4_2:67119517-67119536 None:intergenic 55.0%
! TGGTCTGAGGCCAATCATCG+AGG + chr4_2:67119521-67119540 Msa0616860:CDS 55.0%
! GGTCTGAGGCCAATCATCGA+GGG + chr4_2:67119522-67119541 Msa0616860:CDS 55.0%
AAGTTGCCGACCAACTCCAC+CGG - chr4_2:67119658-67119677 None:intergenic 55.0%
CAAGCGACCATCTGAATGCC+AGG - chr4_2:67119726-67119745 None:intergenic 55.0%
GAAGCTGAGATGGTTAGGCC+CGG + chr4_2:67119882-67119901 Msa0616860:CDS 55.0%
AAGCTGAGATGGTTAGGCCC+GGG + chr4_2:67119883-67119902 Msa0616860:CDS 55.0%
!! GATGTGCCGACTCCATATGC+CGG + chr4_2:67120185-67120204 Msa0616860:CDS 55.0%
!! CTCACCGGAGGTGTTGATGG+AGG + chr4_2:67118462-67118481 Msa0616860:intron 60.0%
!! GAGCTGCCATGACTGGTCTG+AGG + chr4_2:67119508-67119527 Msa0616860:CDS 60.0%
CCAGTTGTCATTCGTGGGCC+CGG + chr4_2:67119636-67119655 Msa0616860:CDS 60.0%
AGTTGCCGACCAACTCCACC+GGG - chr4_2:67119657-67119676 None:intergenic 60.0%
! GGTGGAGTTGGTCGGCAACT+TGG + chr4_2:67119657-67119676 Msa0616860:CDS 60.0%
AGCAGAACACTCGCAGCGTC+TGG + chr4_2:67119680-67119699 Msa0616860:CDS 60.0%
AGCTGAGATGGTTAGGCCCG+GGG + chr4_2:67119884-67119903 Msa0616860:CDS 60.0%
! AGTGGAGGAGTGCATGCGGA+CGG + chr4_2:67120076-67120095 Msa0616860:CDS 60.0%
TGCATGCGGACGGGTGGAAT+TGG + chr4_2:67120086-67120105 Msa0616860:CDS 60.0%
TGGAGTCGGCACATCCTGAG+AGG - chr4_2:67120180-67120199 None:intergenic 60.0%
CCGGGCCCACGAATGACAAC+TGG - chr4_2:67119639-67119658 None:intergenic 65.0%
GTTGTCATTCGTGGGCCCGG+TGG + chr4_2:67119639-67119658 Msa0616860:CDS 65.0%
ATTCGTGGGCCCGGTGGAGT+TGG + chr4_2:67119645-67119664 Msa0616860:CDS 65.0%
! GTGGAGGAGTGCATGCGGAC+GGG + chr4_2:67120077-67120096 Msa0616860:CDS 65.0%
! GTGGGCCCGGTGGAGTTGGT+CGG + chr4_2:67119649-67119668 Msa0616860:CDS 70.0%
! GAGGAGTGCATGCGGACGGG+TGG + chr4_2:67120080-67120099 Msa0616860:CDS 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 67116824 67120598 67116824 ID=Msa0616860;Name=Msa0616860
chr4_2 mRNA 67116824 67120598 67116824 ID=Msa0616860-mRNA-1;Parent=Msa0616860;Name=Msa0616860-mRNA-1;_AED=0.00;_eAED=0.00;_QI=368|1|1|1|1|1|4|321|404
chr4_2 exon 67116824 67117282 67116824 ID=Msa0616860-mRNA-1:exon:19109;Parent=Msa0616860-mRNA-1
chr4_2 exon 67117407 67117513 67117407 ID=Msa0616860-mRNA-1:exon:19110;Parent=Msa0616860-mRNA-1
chr4_2 exon 67117615 67117658 67117615 ID=Msa0616860-mRNA-1:exon:19111;Parent=Msa0616860-mRNA-1
chr4_2 exon 67119305 67120598 67119305 ID=Msa0616860-mRNA-1:exon:19112;Parent=Msa0616860-mRNA-1
chr4_2 five_prime_UTR 67116824 67117191 67116824 ID=Msa0616860-mRNA-1:five_prime_utr;Parent=Msa0616860-mRNA-1
chr4_2 CDS 67117192 67117282 67117192 ID=Msa0616860-mRNA-1:cds;Parent=Msa0616860-mRNA-1
chr4_2 CDS 67117407 67117513 67117407 ID=Msa0616860-mRNA-1:cds;Parent=Msa0616860-mRNA-1
chr4_2 CDS 67117615 67117658 67117615 ID=Msa0616860-mRNA-1:cds;Parent=Msa0616860-mRNA-1
chr4_2 CDS 67119305 67120277 67119305 ID=Msa0616860-mRNA-1:cds;Parent=Msa0616860-mRNA-1
chr4_2 three_prime_UTR 67120278 67120598 67120278 ID=Msa0616860-mRNA-1:three_prime_utr;Parent=Msa0616860-mRNA-1
Gene Sequence

>Msa0616860

ATGGCAACCCTTTTCCAAGGATTAGGAGCTGTTACCTCCAATTCCTTTGATTCCAACAAGCTACTTCTTTCTTCTCGTAGATCCCTTAAAGAGAGGAAAGGAAACATTTTTGTTGTCAGATCTGATGCAAAGGTGAGCAAGACTTTGAAGACTGGTGCAGCTCGTAAGAGTGAATTGTTGATTCCTAATGCAGTTGCAACACAGGAAAGTAGTTCCGCGACTTCTGCAGCATCGAAACCTGGGCATGAACTTCTCCTTTTTGAAGCCCTGCGTGAAGGATTGGAAGAAGAAATGGAAAGGGATCCTTGTGTTTGTGTCATGGGTGAAGATGTAGGTCATTATGGAGGATCTTACAAGGTGACTAGAAACCTAGCTGAAAAGTTTGGCGACCTCAGAGTTTTGGACACCCCTATTGCTGAGAATGCCTTCACTGGAATGGGTATTGGAGCTGCCATGACTGGTCTGAGGCCAATCATCGAGGGCATGAACATGGGATTTCTACTTCTGGCATTTAACCAAATCTCTAACAATTGTGGAATGCTGCATTATACGTCTGGAGGTCAGTTTAAAATACCAGTTGTCATTCGTGGGCCCGGTGGAGTTGGTCGGCAACTTGGAGCAGAACACTCGCAGCGTCTGGAGTCATATTTTCAATCAATCCCTGGCATTCAGATGGTCGCTTGTTCAACACCTTATAACGCGAAGGGCTTGATGAAAGCTGCAATTCGAAGCGACAACCCTGTGATTCTTTTTGAGCATGTTTTGCTTTATAACCTTAAGGAAAGAATCCCAGATGAAGAGTATGTACTGTCACTTGAAGAAGCTGAGATGGTTAGGCCCGGGGAGCATGTTACAATATTAACATATTCCAGGATGAGGTATCATGTCATGCAAGCTGCCAAGACATTGGTGAACAAGGGGTATGACCCTGAAGTGATTGATATCAGGTCTTTGAAACCATTTGATCTTCACACAATTGGGAATTCAATAAAGAAGACACATCGGGTTCTCATAGTGGAGGAGTGCATGCGGACGGGTGGAATTGGTGCTAGTTTGACGGCTGCCATTACTGAAAATTTCCATGACTATTTGGATGCTCCTATCATATGTTTATCCTCTCAGGATGTGCCGACTCCATATGCCGGAACATTGGAGGAATGGACAGTGGTCCAACCTGCTCAAATTGTGACTGCAGTTGAGCAGCTCTGCCAGTGA
Protein sequence

>Msa0616860

MATLFQGLGAVTSNSFDSNKLLLSSRRSLKERKGNIFVVRSDAKVSKTLKTGAARKSELLIPNAVATQESSSATSAASKPGHELLLFEALREGLEEEMERDPCVCVMGEDVGHYGGSYKVTRNLAEKFGDLRVLDTPIAENAFTGMGIGAAMTGLRPIIEGMNMGFLLLAFNQISNNCGMLHYTSGGQFKIPVVIRGPGGVGRQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSDNPVILFEHVLLYNLKERIPDEEYVLSLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIICLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLCQ*