AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0625460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0625460 MtrunA17_Chr4g0000211 92.433 859 5 2 1 859 1 799 0.0 1558
Msa0625460 MtrunA17_Chr4g0064741 36.802 788 369 16 95 858 73 755 9.13e-139 430
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0625460 AT1G16780.1 80.488 861 106 3 1 859 2 802 0.0 1393
Msa0625460 AT1G16780.3 80.488 861 106 3 1 859 2 802 0.0 1393
Msa0625460 AT1G16780.2 80.488 861 106 3 1 859 2 802 0.0 1393
Msa0625460 AT1G78920.1 80.836 861 103 3 1 859 2 802 0.0 1383
Msa0625460 AT1G78920.2 80.836 861 103 3 1 859 2 802 0.0 1383
Msa0625460 AT1G78920.3 80.836 861 103 3 1 859 2 802 0.0 1383
Msa0625460 AT1G15690.1 36.421 788 372 17 95 858 77 759 1.67e-137 427
Msa0625460 AT1G15690.2 33.634 666 325 16 84 725 60 632 8.27e-92 303

Find 259 sgRNAs with CRISPR-Local

Find 496 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGATCTCTCGGACACTTTC+AGG 0.202699 4_3:+4477946 None:intergenic
CATAATTGCTGGGGTTAGTT+TGG 0.214531 4_3:-4478286 Msa0625460:CDS
GTATTAACCTGAACCATTTC+AGG 0.219472 4_3:+4481541 None:intergenic
GTCTCTTTATTGCTTTGTTT+TGG 0.248608 4_3:-4478943 Msa0625460:CDS
CTCCTAGTTGGATATGGATT+TGG 0.258450 4_3:-4480372 Msa0625460:CDS
CCTCTTCTCCTAGTTGGATA+TGG 0.267869 4_3:-4480378 Msa0625460:CDS
GTTCTGCACACCTGTTTAAA+AGG 0.268492 4_3:+4477793 None:intergenic
TTCCTATATTTGCCATTTGT+TGG 0.268654 4_3:+4475810 None:intergenic
ATAATTGCTGGGGTTAGTTT+GGG 0.271626 4_3:-4478285 Msa0625460:CDS
GTATCAGCTATATTTAATTT+AGG 0.276074 4_3:+4475728 None:intergenic
AAGAGACAATATGGAGTAAC+TGG 0.279854 4_3:+4478959 None:intergenic
GTGATGACAAAGACAATAAT+TGG 0.296694 4_3:+4481634 None:intergenic
TGAACACAGCTGGTGGTGCC+TGG 0.305767 4_3:-4476452 Msa0625460:CDS
CTGAACAAAGGGCACCTAAA+AGG 0.319212 4_3:+4481177 None:intergenic
AACAGTGTCTGGTATTCTTA+TGG 0.322376 4_3:-4476484 Msa0625460:CDS
GATTGTCTCGGCCTACTGGC+TGG 0.322613 4_3:-4478220 Msa0625460:CDS
CCTTCTGTTTAGTGCTTACA+TGG 0.322712 4_3:-4477842 Msa0625460:CDS
GCAATAACAGCAGGATTTCT+AGG 0.324300 4_3:+4480237 None:intergenic
TATATTTGTCTTTAGTGCTT+GGG 0.330337 4_3:-4477625 Msa0625460:CDS
TGTTGCACTGTTTGCTCAGT+TGG 0.331138 4_3:-4480340 Msa0625460:CDS
TCCTATATTTGCCATTTGTT+GGG 0.332072 4_3:+4475811 None:intergenic
TAAGGTTTAGAACGCATGTT+AGG 0.339289 4_3:+4481849 None:intergenic
GCTATATTTAATTTAGGTCT+TGG 0.344328 4_3:+4475734 None:intergenic
AACCCAACTGGCGGGCTGTT+TGG 0.345596 4_3:-4478165 Msa0625460:CDS
TTATATTTGTCTTTAGTGCT+TGG 0.350720 4_3:-4477626 Msa0625460:CDS
AAATCCTTTGGTGGTGGCTT+TGG 0.352874 4_3:+4477894 None:intergenic
CATTGAGAGGCCTGGTATAA+TGG 0.354472 4_3:-4477544 Msa0625460:intron
AAAATTCAGCGACCGGGTTC+AGG 0.355060 4_3:-4482008 Msa0625460:five_prime_UTR
AATGAGTCAGCAGGTAGTTC+TGG 0.355374 4_3:-4478043 Msa0625460:CDS
TGGCTGGGAGTGGGCACACC+TGG 0.358855 4_3:-4480885 Msa0625460:CDS
AAAGCAATAAAGAGACAATA+TGG 0.358957 4_3:+4478950 None:intergenic
CACCCACTTCATAAGATATA+TGG 0.360172 4_3:+4481585 None:intergenic
CGCATGTTAGGGAAAGTTCT+TGG 0.364305 4_3:+4481861 None:intergenic
AGCTGTTCTGGCATTTGGTC+TGG 0.366296 4_3:-4478705 Msa0625460:intron
AAGCTTCCTGTTGAGGAGTT+GGG 0.368604 4_3:+4481330 None:intergenic
ATTCTTACCATGGATATGTT+TGG 0.370822 4_3:-4478099 Msa0625460:CDS
GACACTTTCAGGCTGATAAT+AGG 0.372276 4_3:+4477957 None:intergenic
AGGACTATACTCACCTCCTT+GGG 0.372651 4_3:+4481968 None:intergenic
TTGCTGGATATGTAGGGATG+TGG 0.380264 4_3:-4481151 Msa0625460:CDS
TACATAGAGACCGGAGCTCT+TGG 0.380742 4_3:-4476414 Msa0625460:CDS
TTATCAGCTCTTATCGTTGT+TGG 0.383096 4_3:-4480954 Msa0625460:CDS
GTCTTCAAGAGAGGCATTGC+AGG 0.388478 4_3:-4481084 Msa0625460:intron
AGAAGTGTTTCTGCTTGGTT+TGG 0.389035 4_3:-4482264 Msa0625460:five_prime_UTR
ATACTAAAGCAGCTGATGTT+GGG 0.393066 4_3:-4480305 Msa0625460:CDS
CATGGCACTAACATAATTGC+TGG 0.393948 4_3:-4478297 Msa0625460:CDS
ACTCCTCAACAGGAAGCTTC+TGG 0.394465 4_3:-4481326 Msa0625460:CDS
GCTGGAATCTACTGGTCTTC+CGG 0.395596 4_3:-4478262 Msa0625460:CDS
AAACATAAAATGTGGCATAA+AGG 0.395610 4_3:+4480907 None:intergenic
ATCATTTCACCTATTGTAGT+TGG 0.395808 4_3:-4477338 Msa0625460:intron
TGCCAAACAGCCCGCCAGTT+GGG 0.396544 4_3:+4478163 None:intergenic
GAAGCTTCCTGTTGAGGAGT+TGG 0.397166 4_3:+4481329 None:intergenic
GTAAACTCACCAACTACAAT+AGG 0.397201 4_3:+4477329 None:intergenic
CTGATGTTTGCAACAGTGTC+TGG 0.399266 4_3:-4476495 Msa0625460:CDS
ATTCGGGGTACACGTGAATC+TGG 0.399558 4_3:-4478794 Msa0625460:CDS
GGATTTCTAGGGTCATCTTC+AGG 0.399595 4_3:+4480249 None:intergenic
CCTTGTTGGAAAAGTAGAAC+AGG 0.400333 4_3:-4480277 Msa0625460:CDS
TGTTGTTCACTCATTTGATC+TGG 0.402259 4_3:-4478843 Msa0625460:CDS
TACTGGCTGGGACAGACTGC+TGG 0.404895 4_3:-4478207 Msa0625460:CDS
TGCTGGGGTTAGTTTGGGGC+TGG 0.408336 4_3:-4478280 Msa0625460:CDS
TCTTCTGATTCAGATCCATC+TGG 0.409549 4_3:-4478884 Msa0625460:CDS
GGATTTATCCGGACACAGTA+TGG 0.409934 4_3:-4481416 Msa0625460:CDS
ATTCAATGTCACTATAAATC+AGG 0.411061 4_3:+4475871 None:intergenic
GATGATAAAACCTGGTGCTT+TGG 0.411442 4_3:-4477363 Msa0625460:CDS
CACAACTTTAGCCCCGAGTA+AGG 0.416921 4_3:+4476527 None:intergenic
AGCAAGCAACATAGCCATCT+TGG 0.418136 4_3:+4481385 None:intergenic
GCTCACAAAGCAGCAATAAC+AGG 0.418888 4_3:-4476375 Msa0625460:CDS
ATAATCAGTGCCATGATACT+AGG 0.421966 4_3:-4479022 Msa0625460:CDS
TGGCGATTGTCTCGGCCTAC+TGG 0.422518 4_3:-4478224 Msa0625460:CDS
CTGTATAGTAGCCCAAAATT+CGG 0.423075 4_3:+4476556 None:intergenic
GTTGCACTGTTTGCTCAGTT+GGG 0.423871 4_3:-4480339 Msa0625460:CDS
TTTGCTTTGTGCGGGTTGAT+TGG 0.430392 4_3:-4478417 Msa0625460:CDS
AGCTCTTATCGTTGTTGGTA+TGG 0.431805 4_3:-4480949 Msa0625460:CDS
TCGCAGCCCAACTCCTCAAC+AGG 0.433376 4_3:-4481336 Msa0625460:CDS
CGCTGTTGGCCGAACTGCAC+AGG 0.434929 4_3:-4477595 Msa0625460:CDS
AGTATGGAAAATATTTGTTC+TGG 0.439514 4_3:+4478020 None:intergenic
AAATCTCAAATATAACAGTA+TGG 0.439945 4_3:+4478004 None:intergenic
GAATTCACTCTCCGTACAAC+TGG 0.447905 4_3:+4481942 None:intergenic
GGAAAGTTCTTGGCCTATCA+TGG 0.449445 4_3:+4481871 None:intergenic
GTTTAGTGCTTACATGGATG+AGG 0.456398 4_3:-4477836 Msa0625460:CDS
AGTTTGGGGCTGGAATCTAC+TGG 0.456442 4_3:-4478270 Msa0625460:CDS
AGAACCAATGGCAAATCCTT+TGG 0.457270 4_3:+4477882 None:intergenic
TATACAGGGCAACCCTTACT+CGG 0.457737 4_3:-4476540 Msa0625460:CDS
ACCCAACAAATGGCAAATAT+AGG 0.460449 4_3:-4475812 Msa0625460:three_prime_UTR
TTAGCTCTTTCTAGCTCTAC+TGG 0.461182 4_3:-4478321 Msa0625460:CDS
TCAGTGCCTCTTCTCCTAGT+TGG 0.461997 4_3:-4480384 Msa0625460:intron
TGCTGGATATGTAGGGATGT+GGG 0.463967 4_3:-4481150 Msa0625460:CDS
CATGATGGATGAAGATATCA+TGG 0.464184 4_3:-4481907 Msa0625460:CDS
GTTGTTGGTATGGCTGTAAT+CGG 0.468693 4_3:-4480939 Msa0625460:CDS
AGAATTCAAAATTCAGCGAC+CGG 0.468740 4_3:-4482015 Msa0625460:five_prime_UTR
GGACCAGCAGTGTCTTTGAA+TGG 0.468953 4_3:+4476069 None:intergenic
CTGTTTGCTCAGTTGGGTGG+TGG 0.469062 4_3:-4480333 Msa0625460:CDS
GCTGGACTAATAGATGAAAC+AGG 0.469924 4_3:-4478189 Msa0625460:CDS
GACTCCTATGGAAGATCCTA+TGG 0.470305 4_3:-4478765 Msa0625460:CDS
ACAGGATTACAAGGAGAAAC+CGG 0.475584 4_3:-4477432 Msa0625460:intron
AAATTCAGCGACCGGGTTCA+GGG 0.476599 4_3:-4482007 Msa0625460:five_prime_UTR
GCAACACAGCGAGCATAATC+CGG 0.476998 4_3:+4477413 None:intergenic
ATTGTCTCGGCCTACTGGCT+GGG 0.479535 4_3:-4478219 Msa0625460:CDS
AGACCGGCACTTACCATGAT+AGG 0.481059 4_3:-4481884 Msa0625460:CDS
TACTCACCTCCTTGGGGTGG+TGG 0.481212 4_3:+4481975 None:intergenic
TCCAGCAAAACCTGAACAAA+GGG 0.483605 4_3:+4481166 None:intergenic
CAACAACTCTCACAGGAAGA+TGG 0.484051 4_3:+4475993 None:intergenic
TATACTAAAGCAGCTGATGT+TGG 0.487327 4_3:-4480306 Msa0625460:CDS
CTTGTAGTCAGTATAATACT+TGG 0.490704 4_3:+4478362 None:intergenic
CAACAGGAAGCTTCTGGCAT+GGG 0.492214 4_3:-4481320 Msa0625460:CDS
GTTTGCTTCAATGATCATCA+AGG 0.493361 4_3:+4475706 None:intergenic
GATGTTGGGGCAGACCTTGT+TGG 0.498069 4_3:-4480291 Msa0625460:CDS
GACCAGCAGTGTCTTTGAAT+GGG 0.498471 4_3:+4476070 None:intergenic
TCCCTTGCCTCCAAGAGCTC+CGG 0.500650 4_3:+4476404 None:intergenic
GCTTGGGCTTGTGCCGCTGT+TGG 0.500731 4_3:-4477609 Msa0625460:CDS
CTCCAGCATTATCAGCTATC+GGG 0.502143 4_3:+4478076 None:intergenic
ATATAGTTCCATACTGTGTC+CGG 0.503106 4_3:+4481408 None:intergenic
ATACTTTCTACAGGATTACA+AGG 0.503676 4_3:-4477441 Msa0625460:intron
GAAGAAGAAGTGTTTCTGCT+TGG 0.504483 4_3:-4482269 Msa0625460:five_prime_UTR
GGCACAGCTGTAGCAACAAT+GGG 0.504612 4_3:-4478144 Msa0625460:CDS
AACCCACCAACGAAAACTTC+TGG 0.504930 4_3:+4477663 None:intergenic
CCTCCAGCATTATCAGCTAT+CGG 0.506247 4_3:+4478075 None:intergenic
ACCGGAGCTCTTGGAGGCAA+GGG 0.509777 4_3:-4476405 Msa0625460:CDS
TATTAACCTGAACCATTTCA+GGG 0.511261 4_3:+4481542 None:intergenic
CATCAGTGTGGCGATTGTCT+CGG 0.513177 4_3:-4478232 Msa0625460:CDS
ATGTTAGTTGACCCAACAAA+TGG 0.513396 4_3:-4475822 Msa0625460:three_prime_UTR
GTTATATTTGAGATTTCTCA+TGG 0.513693 4_3:-4477997 Msa0625460:CDS
ACTCTCCGTACAACTGGAAA+AGG 0.515535 4_3:+4481948 None:intergenic
ATAGAGACCGGAGCTCTTGG+AGG 0.517810 4_3:-4476411 Msa0625460:CDS
CTCAACGATTACATTGGTAA+TGG 0.518087 4_3:-4476019 Msa0625460:CDS
ACCACCAAAGGATTTGCCAT+TGG 0.518351 4_3:-4477886 Msa0625460:CDS
GATGAAACAGGAAACCCAAC+TGG 0.519102 4_3:-4478177 Msa0625460:CDS
CTTTCTAGCTCTACTGGCCA+TGG 0.520652 4_3:-4478315 Msa0625460:CDS
TAACAACCTCCTGTGCAGTT+CGG 0.520733 4_3:+4477586 None:intergenic
ATGGAGCTGAAGGATTTATC+CGG 0.521496 4_3:-4481427 Msa0625460:CDS
GTACTTCTTTGCATTATCCC+AGG 0.521610 4_3:+4476434 None:intergenic
GAAATGATTGCCAAAGCACC+AGG 0.522732 4_3:+4477353 None:intergenic
GTGCCAAACAGCCCGCCAGT+TGG 0.522998 4_3:+4478162 None:intergenic
GGCTTTGGTTGTGTTACCCA+CGG 0.523635 4_3:+4477909 None:intergenic
AAGGACTATACTCACCTCCT+TGG 0.524955 4_3:+4481967 None:intergenic
AACAACTCTCACAGGAAGAT+GGG 0.526459 4_3:+4475994 None:intergenic
TAATCAGTGCCATGATACTA+GGG 0.526459 4_3:-4479021 Msa0625460:CDS
AGGTCTTGGTGACCAACGCA+TGG 0.532094 4_3:+4475748 None:intergenic
ATACAGGGCAACCCTTACTC+GGG 0.533052 4_3:-4476539 Msa0625460:CDS
TCCTGCTGTTATTGCTGACC+TGG 0.533883 4_3:-4480229 Msa0625460:intron
CTTAAACTTACCATTATACC+AGG 0.534249 4_3:+4477534 None:intergenic
CAGATATTTCGTATTCTACT+CGG 0.534654 4_3:-4481733 Msa0625460:CDS
GGCAAGCGCAGCAGAACCAA+TGG 0.535580 4_3:+4477870 None:intergenic
GAACACAGCTGGTGGTGCCT+GGG 0.539192 4_3:-4476451 Msa0625460:CDS
GACCGGAGCTCTTGGAGGCA+AGG 0.539834 4_3:-4476406 Msa0625460:CDS
ATGCCAGAAGCTTCCTGTTG+AGG 0.540435 4_3:+4481323 None:intergenic
AATTGTAGAAATGAGTCAGC+AGG 0.542639 4_3:-4478052 Msa0625460:CDS
ATGGCACTAACATAATTGCT+GGG 0.543319 4_3:-4478296 Msa0625460:CDS
TGGCACAGCTGTAGCAACAA+TGG 0.545541 4_3:-4478145 Msa0625460:CDS
TCCTTCAGCTCCATCTCGTA+TGG 0.546487 4_3:+4481436 None:intergenic
TTCAACTCATACAATCATGA+TGG 0.546663 4_3:-4481922 Msa0625460:exon
CGCTGCTTATATTCTTACCA+TGG 0.547501 4_3:-4478109 Msa0625460:CDS
AAGGAAGCTGAGAATACAAA+TGG 0.547852 4_3:+4481612 None:intergenic
CTGAGCAAACAGTGCAACAA+AGG 0.548581 4_3:+4480344 None:intergenic
AGGCAGTTCATTGAGAGGCC+TGG 0.551166 4_3:-4477552 Msa0625460:CDS
AATTATGTGTTCCCATGCGT+TGG 0.551669 4_3:-4475760 Msa0625460:three_prime_UTR
CAATAACAGCAGGATTTCTA+GGG 0.553964 4_3:+4480238 None:intergenic
ATCTGGACTAATGACTCCTA+TGG 0.555931 4_3:-4478777 Msa0625460:CDS
AATGGCAAATCCTTTGGTGG+TGG 0.556027 4_3:+4477888 None:intergenic
GCAAAGAAGTACATAGAGAC+CGG 0.557523 4_3:-4476423 Msa0625460:CDS
TGGCCTATCATGGTAAGTGC+CGG 0.559300 4_3:+4481881 None:intergenic
CACTGATGTCCTTGATGCCG+TGG 0.559728 4_3:-4477926 Msa0625460:CDS
GCCACACTGATGACAAGGAC+CGG 0.560747 4_3:+4478243 None:intergenic
ACCAATGGCAAATCCTTTGG+TGG 0.560777 4_3:+4477885 None:intergenic
ACCAGGTCAGCAATAACAGC+AGG 0.562238 4_3:+4480228 None:intergenic
AGCACTAAACAGAAGGAAAG+AGG 0.562509 4_3:+4477849 None:intergenic
TCGCCATATATCTTATGAAG+TGG 0.562743 4_3:-4481588 Msa0625460:CDS
CTACAGATAGCTACTCGAGC+AGG 0.562784 4_3:-4480981 Msa0625460:intron
AATTCAGCGACCGGGTTCAG+GGG 0.562816 4_3:-4482006 Msa0625460:five_prime_UTR
GCCATACGAGATGGAGCTGA+AGG 0.564432 4_3:-4481437 Msa0625460:CDS
CGCCATATATCTTATGAAGT+GGG 0.565069 4_3:-4481587 Msa0625460:CDS
TCAAATGAGTGAACAACAAG+AGG 0.566209 4_3:+4478848 None:intergenic
GAATTCAAAATTCAGCGACC+GGG 0.567058 4_3:-4482014 Msa0625460:five_prime_UTR
TCAACAGGAAGCTTCTGGCA+TGG 0.567106 4_3:-4481321 Msa0625460:CDS
AAACAGGAAACCCAACTGGC+GGG 0.567211 4_3:-4478173 Msa0625460:CDS
TTGTGTTACCCACGGCATCA+AGG 0.567332 4_3:+4477917 None:intergenic
GATCTGGTAGTTTCATCTGT+GGG 0.570293 4_3:-4478827 Msa0625460:CDS
AAGGTTTAGAACGCATGTTA+GGG 0.570693 4_3:+4481850 None:intergenic
CAAGGACATCAGTGATCTCT+CGG 0.571210 4_3:+4477935 None:intergenic
GATGAAGATATCATGGAGAC+CGG 0.572678 4_3:-4481900 Msa0625460:CDS
GGCCCGATAGCTGATAATGC+TGG 0.573393 4_3:-4478078 Msa0625460:CDS
ACCAACGAAAACTTCTGGAA+TGG 0.573408 4_3:+4477668 None:intergenic
GGGCACACCTGGTTCAATGA+AGG 0.573827 4_3:-4480874 Msa0625460:CDS
CCTTTCTGAAGAATTGCCAT+AGG 0.576305 4_3:+4478749 None:intergenic
CACCAAATCCATATCCAACT+AGG 0.578407 4_3:+4480370 None:intergenic
TAATTACTCTGCAGTCTACC+CGG 0.578663 4_3:-4478482 Msa0625460:intron
TAATTGCTGGGGTTAGTTTG+GGG 0.579268 4_3:-4478284 Msa0625460:CDS
TACTAAAGCAGCTGATGTTG+GGG 0.579700 4_3:-4480304 Msa0625460:CDS
ATAGCTGATGCCATACGAGA+TGG 0.580045 4_3:-4481446 Msa0625460:CDS
CCTATGGCAATTCTTCAGAA+AGG 0.580609 4_3:-4478749 Msa0625460:CDS
TGATCTGGTAGTTTCATCTG+TGG 0.580925 4_3:-4478828 Msa0625460:CDS
GGAAACAAGATGAAGCCAGA+TGG 0.582999 4_3:+4478869 None:intergenic
CCATATCCAACTAGGAGAAG+AGG 0.583079 4_3:+4480378 None:intergenic
CCATGTAAGCACTAAACAGA+AGG 0.583611 4_3:+4477842 None:intergenic
CTTACTCGGGGCTAAAGTTG+TGG 0.584208 4_3:-4476526 Msa0625460:CDS
TGTTGGCCGAACTGCACAGG+AGG 0.585269 4_3:-4477592 Msa0625460:CDS
TTTATAAGTACATGAAGTGA+AGG 0.589437 4_3:+4476048 None:intergenic
AGCACTAGAGACTCTGACGT+TGG 0.590025 4_3:+4481115 None:intergenic
ATTAACCTGAACCATTTCAG+GGG 0.591314 4_3:+4481543 None:intergenic
GCTCAACATAAAGTAACCAC+CGG 0.591571 4_3:+4478463 None:intergenic
CAATCGCCACACTGATGACA+AGG 0.592155 4_3:+4478238 None:intergenic
GTGGGTGCTCGCTAAAGATG+AGG 0.592519 4_3:-4481569 Msa0625460:CDS
AGGTTGTTAATGAAGTAAGA+AGG 0.592583 4_3:-4477572 Msa0625460:CDS
GACCCATTCAAAGACACTGC+TGG 0.592957 4_3:-4476072 Msa0625460:CDS
ATCCAGCAAAACCTGAACAA+AGG 0.593209 4_3:+4481165 None:intergenic
ACAACTTTAGCCCCGAGTAA+GGG 0.593448 4_3:+4476528 None:intergenic
GGTCTTGGTGACCAACGCAT+GGG 0.595304 4_3:+4475749 None:intergenic
CAGCAATTATGTTAGTGCCA+TGG 0.596187 4_3:+4478298 None:intergenic
ATTCAGCGACCGGGTTCAGG+GGG 0.596939 4_3:-4482005 Msa0625460:five_prime_UTR
TGTGAGAGTTGTTGATATTG+CGG 0.599109 4_3:-4475984 Msa0625460:exon
GCACTGTTTGCTCAGTTGGG+TGG 0.600069 4_3:-4480336 Msa0625460:CDS
TTCTAAGGTTGGAGACAATG+TGG 0.602278 4_3:-4479095 Msa0625460:intron
GAAAGAGCTAATGTGCGCAC+AGG 0.602469 4_3:+4478333 None:intergenic
GCAATATCAACAACTCTCAC+AGG 0.603892 4_3:+4475986 None:intergenic
GCAAAATTGAACCATGCTGA+AGG 0.604191 4_3:+4478435 None:intergenic
CTATACTCACCTCCTTGGGG+TGG 0.608105 4_3:+4481972 None:intergenic
CTGTGCAGTTCGGCCAACAG+CGG 0.608968 4_3:+4477596 None:intergenic
AGGAAGCTTCTGGCATGGGA+AGG 0.613106 4_3:-4481316 Msa0625460:intron
ACTAAAGACAAATATAAGCA+TGG 0.615466 4_3:+4477632 None:intergenic
GTATGGAACTATATCCAAGA+TGG 0.620046 4_3:-4481399 Msa0625460:CDS
TTGAGCAAGCACCTTCAGCA+TGG 0.620246 4_3:-4478446 Msa0625460:CDS
TAAGAAGGCAGTTCATTGAG+AGG 0.623441 4_3:-4477557 Msa0625460:CDS
GCACAACGCTGTAAAATCGA+AGG 0.623843 4_3:-4478989 Msa0625460:CDS
GAGTCTCTAGTGCTGCGAGA+CGG 0.624351 4_3:-4481106 Msa0625460:CDS
GATGCTCTCAACGATTACAT+TGG 0.626481 4_3:-4476025 Msa0625460:CDS
TCTAAGGTTGGAGACAATGT+GGG 0.628132 4_3:-4479094 Msa0625460:intron
AGCAGTCTGTCCCAGCCAGT+AGG 0.628575 4_3:+4478209 None:intergenic
TATCGGGCCAAACATATCCA+TGG 0.628672 4_3:+4478092 None:intergenic
TCAGTGACCTTCATTGAACC+AGG 0.631148 4_3:+4480867 None:intergenic
CTTGTTGGAAAAGTAGAACA+GGG 0.631174 4_3:-4480276 Msa0625460:CDS
AAAAGATAGCTCCAAAGCCG+AGG 0.633559 4_3:+4481677 None:intergenic
CGAGGAGTAAAAGAATGAAG+AGG 0.633805 4_3:+4481695 None:intergenic
ACAACCAAAGCCACCACCAA+AGG 0.636877 4_3:-4477898 Msa0625460:CDS
TGGGTGCTCGCTAAAGATGA+GGG 0.637313 4_3:-4481568 Msa0625460:CDS
AGCAAACAGTGCAACAAAGG+AGG 0.638258 4_3:+4480347 None:intergenic
TCCCAGCCAAACATAAAATG+TGG 0.638868 4_3:+4480899 None:intergenic
TGCGAGACGGTCTTCAAGAG+AGG 0.642215 4_3:-4481093 Msa0625460:CDS
AGGAACGAACACGAACACGA+AGG 0.643534 4_3:-4482305 Msa0625460:five_prime_UTR
GGACTATACTCACCTCCTTG+GGG 0.653343 4_3:+4481969 None:intergenic
ACTGATGTCCTTGATGCCGT+GGG 0.654794 4_3:-4477925 Msa0625460:CDS
CTCAACATAAAGTAACCACC+GGG 0.655219 4_3:+4478464 None:intergenic
TTAAGAGAGATGATAAAACC+TGG 0.656352 4_3:-4477371 Msa0625460:CDS
ATTGCCATAGGATCTTCCAT+AGG 0.659545 4_3:+4478761 None:intergenic
GAAACAGGAAACCCAACTGG+CGG 0.663662 4_3:-4478174 Msa0625460:CDS
AATCAGTGCCATGATACTAG+GGG 0.667370 4_3:-4479020 Msa0625460:CDS
CAGATAGCTACTCGAGCAGG+TGG 0.668716 4_3:-4480978 Msa0625460:CDS
GTGGGAGATTGTGCTGCTAG+AGG 0.672732 4_3:-4479076 Msa0625460:CDS
AGAGACAATATGGAGTAACT+GGG 0.681511 4_3:+4478960 None:intergenic
TCATAAGATATATGGCGACA+AGG 0.681860 4_3:+4481593 None:intergenic
CCGATAGCTGATAATGCTGG+AGG 0.682452 4_3:-4478075 Msa0625460:CDS
TACAGGGCAACCCTTACTCG+GGG 0.682668 4_3:-4476538 Msa0625460:CDS
TGGCACTAACATAATTGCTG+GGG 0.685344 4_3:-4478295 Msa0625460:CDS
TCCGGTCCTTGTCATCAGTG+TGG 0.685748 4_3:-4478244 Msa0625460:CDS
TTAACCTGAACCATTTCAGG+GGG 0.686083 4_3:+4481544 None:intergenic
GGTGACTTACCACCACCCCA+AGG 0.687878 4_3:-4481984 Msa0625460:five_prime_UTR
CATGGTAAGAATATAAGCAG+CGG 0.698682 4_3:+4478110 None:intergenic
ATCAGTGCCATGATACTAGG+GGG 0.707686 4_3:-4479019 Msa0625460:CDS
TTACTCTGCAGTCTACCCGG+TGG 0.731661 4_3:-4478479 Msa0625460:intron
GACTTACCACCACCCCAAGG+AGG 0.745759 4_3:-4481981 Msa0625460:five_prime_UTR
GATGATAATACCTACCAGGG+GGG 0.785251 4_3:+4481824 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCATTATAATAAATAAGTT+CGG + chr4_3:4477246-4477265 None:intergenic 10.0%
!! AACTTATTTATTATAATGAA+TGG - chr4_3:4477246-4477265 Msa0625460:intron 10.0%
!!! GAATTTTTAAAATCAAAATA+AGG - chr4_3:4477990-4478009 Msa0625460:CDS 10.0%
!! TCATTTATGATATTTAAATT+TGG - chr4_3:4479398-4479417 Msa0625460:intron 10.0%
!!! TATTTGATTTTGATATTTTT+GGG - chr4_3:4482129-4482148 Msa0625460:intron 10.0%
!!! ATTTTGAATCTTGAAATTAT+TGG - chr4_3:4476550-4476569 Msa0625460:CDS 15.0%
!! TCATTATAATAAATAAGTTC+GGG + chr4_3:4477245-4477264 None:intergenic 15.0%
!! TACTGTTAAATTTCTTATTA+TGG + chr4_3:4478624-4478643 None:intergenic 15.0%
!! TAATAAGAAATTTAACAGTA+TGG - chr4_3:4478624-4478643 Msa0625460:intron 15.0%
!! AAATAATTGATATACATACA+CGG - chr4_3:4478780-4478799 Msa0625460:CDS 15.0%
!! CTCATAAAATTATAAACATA+AGG - chr4_3:4478826-4478845 Msa0625460:CDS 15.0%
!!! TTTTCTGTTTATAATTTATG+TGG - chr4_3:4478865-4478884 Msa0625460:CDS 15.0%
!! ATTAAAATTTAATGCAATTG+AGG - chr4_3:4480318-4480337 Msa0625460:CDS 15.0%
!! TTAAAATTTAATGCAATTGA+GGG - chr4_3:4480319-4480338 Msa0625460:CDS 15.0%
!!! ATCTGTTAATAGTATATTTT+TGG - chr4_3:4481422-4481441 Msa0625460:CDS 15.0%
!!! TTAATAGTATATTTTTGGTA+TGG - chr4_3:4481427-4481446 Msa0625460:CDS 15.0%
!!! TTTATTTTTATTTTACAGAG+TGG - chr4_3:4481970-4481989 Msa0625460:five_prime_UTR 15.0%
!!! TTATTTTTATTTTACAGAGT+GGG - chr4_3:4481971-4481990 Msa0625460:five_prime_UTR 15.0%
!! CAAAAATATCAAAATCAAAT+AGG + chr4_3:4482130-4482149 None:intergenic 15.0%
!!! CTATTTGATTTTGATATTTT+TGG - chr4_3:4482128-4482147 Msa0625460:intron 15.0%
!! ATTTAAATAGACCAAAAATA+TGG + chr4_3:4482290-4482309 None:intergenic 15.0%
!! TTAAATTAATACGATCTATC+AGG - chr4_3:4475978-4475997 Msa0625460:three_prime_UTR 20.0%
!! ATCTAGAAAGTAATATGATA+AGG + chr4_3:4476603-4476622 None:intergenic 20.0%
!! AACTTTCTTTCAGTTAATAT+AGG + chr4_3:4477066-4477085 None:intergenic 20.0%
!! CATTATAATAAATAAGTTCG+GGG + chr4_3:4477244-4477263 None:intergenic 20.0%
!!! TGAAAATGATATACATCTTT+TGG + chr4_3:4477462-4477481 None:intergenic 20.0%
!! TTATTTGGATAGTTATTGAA+TGG + chr4_3:4478526-4478545 None:intergenic 20.0%
!!! TTTTATGAACAAATTGAGAA+AGG + chr4_3:4478563-4478582 None:intergenic 20.0%
!! CATAATATCTTCAATATTCT+TGG + chr4_3:4478740-4478759 None:intergenic 20.0%
!! TAAAATTATAAACATAAGGC+AGG - chr4_3:4478830-4478849 Msa0625460:CDS 20.0%
!! AAATCTCAAATATAACAGTA+TGG + chr4_3:4480066-4480085 None:intergenic 20.0%
!!! TTTTAATAGCCTAATAAGAT+GGG + chr4_3:4480305-4480324 None:intergenic 20.0%
!!! ATTTTAATAGCCTAATAAGA+TGG + chr4_3:4480306-4480325 None:intergenic 20.0%
!!! TTCAACATTTATACAAGTTT+TGG - chr4_3:4480820-4480839 Msa0625460:intron 20.0%
!!! TCAACATTTATACAAGTTTT+GGG - chr4_3:4480821-4480840 Msa0625460:intron 20.0%
!!! ATATTGTGTTAAATTTCTAG+AGG - chr4_3:4480915-4480934 Msa0625460:CDS 20.0%
!! ATATTACTCTAAATTGTCAT+AGG + chr4_3:4481774-4481793 None:intergenic 20.0%
!! AGGTATATTATAATAAACAC+TGG + chr4_3:4481894-4481913 None:intergenic 20.0%
!!! GTATCAGCTATATTTAATTT+AGG + chr4_3:4482342-4482361 None:intergenic 20.0%
! ATAGATAGATCTAAATGCAT+CGG + chr4_3:4475917-4475936 None:intergenic 25.0%
!! ATTTTGTTGAATTGAATGTG+AGG - chr4_3:4476016-4476035 Msa0625460:CDS 25.0%
!! TTTTGTTGAATTGAATGTGA+GGG - chr4_3:4476017-4476036 Msa0625460:CDS 25.0%
! AAGATGGGAAATTCAAAAAT+GGG + chr4_3:4476291-4476310 None:intergenic 25.0%
! AAACATAAAATGTGGCATAA+AGG + chr4_3:4477163-4477182 None:intergenic 25.0%
!! TTTATGCCACATTTTATGTT+TGG - chr4_3:4477162-4477181 Msa0625460:intron 25.0%
! TGAGTACTATTATGTTTCAT+TGG - chr4_3:4477322-4477341 Msa0625460:intron 25.0%
! AAATGGAAAAATAGTTTGGA+AGG + chr4_3:4477355-4477374 None:intergenic 25.0%
!!! TTCCAAACTATTTTTCCATT+TGG - chr4_3:4477354-4477373 Msa0625460:CDS 25.0%
! TACCAAATGGAAAAATAGTT+TGG + chr4_3:4477359-4477378 None:intergenic 25.0%
! TAAAAATCAAATAGAGAGAG+AGG + chr4_3:4477646-4477665 None:intergenic 25.0%
!!! CAATTGTTGTTTACTTCATT+TGG - chr4_3:4477869-4477888 Msa0625460:CDS 25.0%
! GAAAAACAAGTAGTAATCTA+TGG + chr4_3:4477947-4477966 None:intergenic 25.0%
!!! ATTACTACTTGTTTTTCTCA+GGG - chr4_3:4477950-4477969 Msa0625460:CDS 25.0%
! AAATTCAACAAACTATCCTA+TGG + chr4_3:4477976-4477995 None:intergenic 25.0%
!! AATTACATTGACGTTTTACA+TGG - chr4_3:4478060-4478079 Msa0625460:CDS 25.0%
!! TTTTACATGGTCATATTTGA+AGG - chr4_3:4478073-4478092 Msa0625460:CDS 25.0%
! AACAACAAATGCAAATATCT+AGG + chr4_3:4478174-4478193 None:intergenic 25.0%
!!! TATTTGCATTTGTTGTTTTG+TGG - chr4_3:4478177-4478196 Msa0625460:CDS 25.0%
! ATAAAGTATGTGATAGAAAC+TGG - chr4_3:4478271-4478290 Msa0625460:CDS 25.0%
! GTTATTGAATGGTTATAAGA+GGG + chr4_3:4478515-4478534 None:intergenic 25.0%
! AGTTATTGAATGGTTATAAG+AGG + chr4_3:4478516-4478535 None:intergenic 25.0%
!!! TGAAATAAAAGTATCTCCAA+TGG + chr4_3:4478677-4478696 None:intergenic 25.0%
!!! ATGATTCTGTTTTGATTCTA+AGG - chr4_3:4478957-4478976 Msa0625460:CDS 25.0%
! AAAGCAATAAAGAGACAATA+TGG + chr4_3:4479120-4479139 None:intergenic 25.0%
!!! TTTGGCTTTTTTAAGTTATC+TGG - chr4_3:4479416-4479435 Msa0625460:intron 25.0%
!!! TTGGCTTTTTTAAGTTATCT+GGG - chr4_3:4479417-4479436 Msa0625460:intron 25.0%
! GAAATATGCAATTTCTGTTT+AGG - chr4_3:4479492-4479511 Msa0625460:intron 25.0%
!! AAAAGGTTGAAGATATTTTG+TGG + chr4_3:4479524-4479543 None:intergenic 25.0%
! AGGTGTGAAATAATTTGAAA+AGG + chr4_3:4479541-4479560 None:intergenic 25.0%
! AGTATGGAAAATATTTGTTC+TGG + chr4_3:4480050-4480069 None:intergenic 25.0%
!! GTTATATTTGAGATTTCTCA+TGG - chr4_3:4480070-4480089 Msa0625460:intron 25.0%
! ACTAAAGACAAATATAAGCA+TGG + chr4_3:4480438-4480457 None:intergenic 25.0%
! TTATATTTGTCTTTAGTGCT+TGG - chr4_3:4480441-4480460 Msa0625460:intron 25.0%
! TATATTTGTCTTTAGTGCTT+GGG - chr4_3:4480442-4480461 Msa0625460:intron 25.0%
! TAGATGCAAATGAATATTTG+TGG - chr4_3:4480864-4480883 Msa0625460:intron 25.0%
!!! AATGAATCATGAACTAGTTT+TGG - chr4_3:4481006-4481025 Msa0625460:intron 25.0%
! GCTAGATAAATAGAAAAACT+CGG + chr4_3:4481052-4481071 None:intergenic 25.0%
!!! TTTTTCATTTTTCTATGACC+TGG - chr4_3:4481388-4481407 Msa0625460:CDS 25.0%
!!! GATATTTTTATGCCAAACTT+AGG - chr4_3:4481449-4481468 Msa0625460:CDS 25.0%
! AAATGTAACAAACCTAAGTT+TGG + chr4_3:4481464-4481483 None:intergenic 25.0%
!!! CATTTTATTTTATCACTTGC+AGG - chr4_3:4481479-4481498 Msa0625460:intron 25.0%
! AATGTCATAATTGAACAACA+AGG + chr4_3:4481745-4481764 None:intergenic 25.0%
! AGAAAAACAGAATATATCAC+AGG + chr4_3:4481914-4481933 None:intergenic 25.0%
! TTTATAAGTACATGAAGTGA+AGG + chr4_3:4482022-4482041 None:intergenic 25.0%
! ATTCAATGTCACTATAAATC+AGG + chr4_3:4482199-4482218 None:intergenic 25.0%
! TAAATAGACCAAAAATATGG+AGG + chr4_3:4482287-4482306 None:intergenic 25.0%
!! GCTATATTTAATTTAGGTCT+TGG + chr4_3:4482336-4482355 None:intergenic 25.0%
AGTAGTTCGAAAAAAAGAGA+AGG - chr4_3:4475742-4475761 Msa0625460:three_prime_UTR 30.0%
TTCAACTCATACAATCATGA+TGG - chr4_3:4476145-4476164 Msa0625460:intron 30.0%
TAAGATGATAATACCTACCA+GGG + chr4_3:4476249-4476268 None:intergenic 30.0%
AGATGGGAAATTCAAAAATG+GGG + chr4_3:4476290-4476309 None:intergenic 30.0%
GAAGATGGGAAATTCAAAAA+TGG + chr4_3:4476292-4476311 None:intergenic 30.0%
CAGATATTTCGTATTCTACT+CGG - chr4_3:4476334-4476353 Msa0625460:intron 30.0%
!! TTTGGAGCTATCTTTTACAT+GGG - chr4_3:4476397-4476416 Msa0625460:CDS 30.0%
GTGATGACAAAGACAATAAT+TGG + chr4_3:4476436-4476455 None:intergenic 30.0%
TATTAACCTGAACCATTTCA+GGG + chr4_3:4476528-4476547 None:intergenic 30.0%
GAAAGTAATATGATAAGGTC+AGG + chr4_3:4476598-4476617 None:intergenic 30.0%
TCTCTCATACATTCTATTTC+AGG - chr4_3:4476835-4476854 Msa0625460:intron 30.0%
AATCATACACACTTACCAAA+TGG + chr4_3:4477372-4477391 None:intergenic 30.0%
TTTGGTAAGTGTGTATGATT+TGG - chr4_3:4477372-4477391 Msa0625460:CDS 30.0%
!!! GGTGATTTTTTATCTGTGTA+TGG - chr4_3:4477393-4477412 Msa0625460:CDS 30.0%
TCAGCTAACTATGATAAAAC+TGG + chr4_3:4477505-4477524 None:intergenic 30.0%
TTTATCATAGTTAGCTGAAG+TGG - chr4_3:4477507-4477526 Msa0625460:intron 30.0%
TTATCATAGTTAGCTGAAGT+GGG - chr4_3:4477508-4477527 Msa0625460:intron 30.0%
TAGCAGTAAAGACAAAATCA+TGG + chr4_3:4477580-4477599 None:intergenic 30.0%
! ATGATTTTGTCTTTACTGCT+AGG - chr4_3:4477579-4477598 Msa0625460:CDS 30.0%
! TGATTTTGTCTTTACTGCTA+GGG - chr4_3:4477580-4477599 Msa0625460:CDS 30.0%
ACAACAATTGAACAATTACC+AGG + chr4_3:4477859-4477878 None:intergenic 30.0%
! TGTTGTTTACTTCATTTGGA+AGG - chr4_3:4477873-4477892 Msa0625460:CDS 30.0%
GTTGTTTACTTCATTTGGAA+GGG - chr4_3:4477874-4477893 Msa0625460:CDS 30.0%
!! GATTACTACTTGTTTTTCTC+AGG - chr4_3:4477949-4477968 Msa0625460:CDS 30.0%
!! TTGAAGGTGTTAATGTTAGA+CGG - chr4_3:4478089-4478108 Msa0625460:CDS 30.0%
AATGCAAATATCTAGGTCTT+AGG + chr4_3:4478167-4478186 None:intergenic 30.0%
TATGGGATTTATCACTTCTA+TGG - chr4_3:4478208-4478227 Msa0625460:CDS 30.0%
CTATCACATACTTTATTCTC+TGG + chr4_3:4478267-4478286 None:intergenic 30.0%
ATAGAAACTGGTGTCTATAT+TGG - chr4_3:4478283-4478302 Msa0625460:CDS 30.0%
GTGTCTATATTGGTAAGTTT+AGG - chr4_3:4478293-4478312 Msa0625460:CDS 30.0%
! TTTCTTGGAAGGGAATTTTT+CGG + chr4_3:4478445-4478464 None:intergenic 30.0%
AACAAATTGAGAAAGGAAAG+AGG + chr4_3:4478556-4478575 None:intergenic 30.0%
!!! TTCTGTTTTGATTCTAAGGT+TGG - chr4_3:4478961-4478980 Msa0625460:CDS 30.0%
!!! GTCTCTTTATTGCTTTGTTT+TGG - chr4_3:4479124-4479143 Msa0625460:intron 30.0%
! CTGTGGGAATATTTTCTATT+CGG - chr4_3:4479256-4479275 Msa0625460:intron 30.0%
! TGTGGGAATATTTTCTATTC+GGG - chr4_3:4479257-4479276 Msa0625460:intron 30.0%
!!! TACAATAGTTTTAGCTGTTC+TGG - chr4_3:4479350-4479369 Msa0625460:intron 30.0%
!!! CTTTTTTAAGTTATCTGGGT+TGG - chr4_3:4479421-4479440 Msa0625460:intron 30.0%
TAAACAGTAAGAGCAATAGA+AGG + chr4_3:4479561-4479580 None:intergenic 30.0%
CTTGTAGTCAGTATAATACT+TGG + chr4_3:4479708-4479727 None:intergenic 30.0%
ATTCTTACCATGGATATGTT+TGG - chr4_3:4479968-4479987 Msa0625460:intron 30.0%
TTTAATGCAATTGAGGGAAA+AGG - chr4_3:4480325-4480344 Msa0625460:CDS 30.0%
TCTGAAAACATGATTATTGC+AGG - chr4_3:4480367-4480386 Msa0625460:CDS 30.0%
AGGTTGTTAATGAAGTAAGA+AGG - chr4_3:4480495-4480514 Msa0625460:intron 30.0%
CTTAAACTTACCATTATACC+AGG + chr4_3:4480536-4480555 None:intergenic 30.0%
ATACTTTCTACAGGATTACA+AGG - chr4_3:4480626-4480645 Msa0625460:intron 30.0%
TTAAGAGAGATGATAAAACC+TGG - chr4_3:4480696-4480715 Msa0625460:intron 30.0%
ATCATTTCACCTATTGTAGT+TGG - chr4_3:4480729-4480748 Msa0625460:intron 30.0%
TATATTACTAGTGAAACCTG+TGG - chr4_3:4480791-4480810 Msa0625460:intron 30.0%
ATATTACTAGTGAAACCTGT+GGG - chr4_3:4480792-4480811 Msa0625460:intron 30.0%
TGCATCTAATGTGATGATTA+TGG + chr4_3:4480852-4480871 None:intergenic 30.0%
! TGAATATTTGTGGCTATTTC+AGG - chr4_3:4480874-4480893 Msa0625460:CDS 30.0%
!! GTTCATGATTCATTGATTTG+AGG + chr4_3:4481000-4481019 None:intergenic 30.0%
TTCTTGATTATGAACTCTTC+AGG - chr4_3:4481077-4481096 Msa0625460:intron 30.0%
TGCTATTAACAATGTACTAG+TGG + chr4_3:4481120-4481139 None:intergenic 30.0%
!! TAAGGCATTTTCCATAAAGT+TGG + chr4_3:4481342-4481361 None:intergenic 30.0%
AAACAGTTAGCTGATATCTA+AGG + chr4_3:4481360-4481379 None:intergenic 30.0%
!! AGGTTTTGTATTCCGAATTT+TGG - chr4_3:4481499-4481518 Msa0625460:intron 30.0%
!! GGTTTTGTATTCCGAATTTT+GGG - chr4_3:4481500-4481519 Msa0625460:intron 30.0%
! CTATCTTTGCTGTACAATTA+TGG - chr4_3:4481808-4481827 Msa0625460:intron 30.0%
! TTTTCACTATTCAGCTTTTG+TGG - chr4_3:4481868-4481887 Msa0625460:CDS 30.0%
! AGGCAAAAGTTATGCTTTTA+GGG + chr4_3:4482110-4482129 None:intergenic 30.0%
! TAGGCAAAAGTTATGCTTTT+AGG + chr4_3:4482111-4482130 None:intergenic 30.0%
!! ATTTTTGGGAGTATAGAGAT+AGG - chr4_3:4482143-4482162 Msa0625460:intron 30.0%
! TCCTATATTTGCCATTTGTT+GGG + chr4_3:4482259-4482278 None:intergenic 30.0%
! TTCCTATATTTGCCATTTGT+TGG + chr4_3:4482260-4482279 None:intergenic 30.0%
AGAATTCAAAATTCAGCGAC+CGG - chr4_3:4476052-4476071 Msa0625460:CDS 35.0%
! ATAGTCCTTTTCCAGTTGTA+CGG - chr4_3:4476114-4476133 Msa0625460:intron 35.0%
!! CATGATGGATGAAGATATCA+TGG - chr4_3:4476160-4476179 Msa0625460:intron 35.0%
! AAGGTTTAGAACGCATGTTA+GGG + chr4_3:4476220-4476239 None:intergenic 35.0%
! TAAGGTTTAGAACGCATGTT+AGG + chr4_3:4476221-4476240 None:intergenic 35.0%
AAGATGATAATACCTACCAG+GGG + chr4_3:4476248-4476267 None:intergenic 35.0%
GTAAGATGATAATACCTACC+AGG + chr4_3:4476250-4476269 None:intergenic 35.0%
GATGGGAAATTCAAAAATGG+GGG + chr4_3:4476289-4476308 None:intergenic 35.0%
AAACATGTAAGGAGGAAGAT+GGG + chr4_3:4476306-4476325 None:intergenic 35.0%
CAGAAATCAAACATGTAAGG+AGG + chr4_3:4476314-4476333 None:intergenic 35.0%
CTGCAGAAATCAAACATGTA+AGG + chr4_3:4476317-4476336 None:intergenic 35.0%
! CTCTTCATTCTTTTACTCCT+CGG - chr4_3:4476373-4476392 Msa0625460:CDS 35.0%
!!! CTTTGGAGCTATCTTTTACA+TGG - chr4_3:4476396-4476415 Msa0625460:CDS 35.0%
AAGGAAGCTGAGAATACAAA+TGG + chr4_3:4476458-4476477 None:intergenic 35.0%
TCATAAGATATATGGCGACA+AGG + chr4_3:4476477-4476496 None:intergenic 35.0%
TCGCCATATATCTTATGAAG+TGG - chr4_3:4476479-4476498 Msa0625460:CDS 35.0%
CGCCATATATCTTATGAAGT+GGG - chr4_3:4476480-4476499 Msa0625460:CDS 35.0%
CACCCACTTCATAAGATATA+TGG + chr4_3:4476485-4476504 None:intergenic 35.0%
ATTAACCTGAACCATTTCAG+GGG + chr4_3:4476527-4476546 None:intergenic 35.0%
GTATTAACCTGAACCATTTC+AGG + chr4_3:4476529-4476548 None:intergenic 35.0%
ATATAGTTCCATACTGTGTC+CGG + chr4_3:4476662-4476681 None:intergenic 35.0%
GTATGGAACTATATCCAAGA+TGG - chr4_3:4476668-4476687 Msa0625460:intron 35.0%
! ACTGTAGCTTCTTTCCTTTT+AGG - chr4_3:4476876-4476895 Msa0625460:intron 35.0%
TTATCAGCTCTTATCGTTGT+TGG - chr4_3:4477113-4477132 Msa0625460:intron 35.0%
TGGATACAGAACACATTTAG+GGG + chr4_3:4477485-4477504 None:intergenic 35.0%
CTGGATACAGAACACATTTA+GGG + chr4_3:4477486-4477505 None:intergenic 35.0%
ACTGGATACAGAACACATTT+AGG + chr4_3:4477487-4477506 None:intergenic 35.0%
GAATAAAAGCCAAAAGATGC+AGG + chr4_3:4477618-4477637 None:intergenic 35.0%
TATACTAAAGCAGCTGATGT+TGG - chr4_3:4477761-4477780 Msa0625460:intron 35.0%
ATACTAAAGCAGCTGATGTT+GGG - chr4_3:4477762-4477781 Msa0625460:intron 35.0%
CTTGTTGGAAAAGTAGAACA+GGG - chr4_3:4477791-4477810 Msa0625460:intron 35.0%
CAATAACAGCAGGATTTCTA+GGG + chr4_3:4477832-4477851 None:intergenic 35.0%
ATTGATGCTTATGTCAATCC+AGG - chr4_3:4477917-4477936 Msa0625460:CDS 35.0%
TTGATGCTTATGTCAATCCA+GGG - chr4_3:4477918-4477937 Msa0625460:CDS 35.0%
!! TGAAGGTGTTAATGTTAGAC+GGG - chr4_3:4478090-4478109 Msa0625460:CDS 35.0%
! TGTTTTGTGGAAGAAGCTTA+TGG - chr4_3:4478190-4478209 Msa0625460:CDS 35.0%
! GTTTTGTGGAAGAAGCTTAT+GGG - chr4_3:4478191-4478210 Msa0625460:CDS 35.0%
! CACTTCTATGGTCATTGTTT+TGG - chr4_3:4478220-4478239 Msa0625460:CDS 35.0%
! ATCACACAAGAAACTGACTT+AGG - chr4_3:4478392-4478411 Msa0625460:CDS 35.0%
GAAAGAGGAAAGTGGTTATT+TGG + chr4_3:4478541-4478560 None:intergenic 35.0%
CTTATTGTAGAGATGTCCAT+TGG - chr4_3:4478658-4478677 Msa0625460:intron 35.0%
ACAGAAAGAAGCAAACACAA+AGG + chr4_3:4478891-4478910 None:intergenic 35.0%
CAGAATCATTATGATACCAC+TGG + chr4_3:4478946-4478965 None:intergenic 35.0%
ATAATCAGTGCCATGATACT+AGG - chr4_3:4479045-4479064 Msa0625460:CDS 35.0%
TAATCAGTGCCATGATACTA+GGG - chr4_3:4479046-4479065 Msa0625460:CDS 35.0%
AGAGACAATATGGAGTAACT+GGG + chr4_3:4479110-4479129 None:intergenic 35.0%
AAGAGACAATATGGAGTAAC+TGG + chr4_3:4479111-4479130 None:intergenic 35.0%
TCAAATGAGTGAACAACAAG+AGG + chr4_3:4479222-4479241 None:intergenic 35.0%
TGTTGTTCACTCATTTGATC+TGG - chr4_3:4479224-4479243 Msa0625460:intron 35.0%
! GTGGGAATATTTTCTATTCG+GGG - chr4_3:4479258-4479277 Msa0625460:intron 35.0%
CTAATAGAACACAGTATGCT+TGG + chr4_3:4479447-4479466 None:intergenic 35.0%
! TGGTTCAATTTTGCTTTGTG+CGG - chr4_3:4479641-4479660 Msa0625460:intron 35.0%
ATGGCACTAACATAATTGCT+GGG - chr4_3:4479771-4479790 Msa0625460:intron 35.0%
!! ATAATTGCTGGGGTTAGTTT+GGG - chr4_3:4479782-4479801 Msa0625460:intron 35.0%
CATGGTAAGAATATAAGCAG+CGG + chr4_3:4479960-4479979 None:intergenic 35.0%
AATTGTAGAAATGAGTCAGC+AGG - chr4_3:4480015-4480034 Msa0625460:intron 35.0%
GTATCAAAGTCGTTAACAGA+AGG + chr4_3:4480610-4480629 None:intergenic 35.0%
ACGACTTTGATACTTTCTAC+AGG - chr4_3:4480617-4480636 Msa0625460:intron 35.0%
GTAAACTCACCAACTACAAT+AGG + chr4_3:4480741-4480760 None:intergenic 35.0%
AAATGTTGAATTTCTCCCAC+AGG + chr4_3:4480810-4480829 None:intergenic 35.0%
GTACTAGTGGAACAATTACA+AGG + chr4_3:4481107-4481126 None:intergenic 35.0%
! TAGCAGTTGTATACTCCTTT+TGG - chr4_3:4481135-4481154 Msa0625460:CDS 35.0%
TAGATCTCTTCAATGCCAAA+AGG + chr4_3:4481153-4481172 None:intergenic 35.0%
! ATGCTTTTCCTTGTTGCATT+TGG - chr4_3:4481223-4481242 Msa0625460:intron 35.0%
! TGCTTTTCCTTGTTGCATTT+GGG - chr4_3:4481224-4481243 Msa0625460:intron 35.0%
TCTGTCACTACTAAAGTTCT+TGG - chr4_3:4481315-4481334 Msa0625460:intron 35.0%
AAGTTCTTGGACCAACTTTA+TGG - chr4_3:4481328-4481347 Msa0625460:CDS 35.0%
CTGTATAGTAGCCCAAAATT+CGG + chr4_3:4481514-4481533 None:intergenic 35.0%
! GAATTTTGGGCTACTATACA+GGG - chr4_3:4481513-4481532 Msa0625460:intron 35.0%
AACAGTGTCTGGTATTCTTA+TGG - chr4_3:4481583-4481602 Msa0625460:CDS 35.0%
CTCAACGATTACATTGGTAA+TGG - chr4_3:4482048-4482067 Msa0625460:five_prime_UTR 35.0%
TGTGAGAGTTGTTGATATTG+CGG - chr4_3:4482083-4482102 Msa0625460:intron 35.0%
! GGCAAAAGTTATGCTTTTAG+GGG + chr4_3:4482109-4482128 None:intergenic 35.0%
ATGTTAGTTGACCCAACAAA+TGG - chr4_3:4482245-4482264 Msa0625460:five_prime_UTR 35.0%
ACCCAACAAATGGCAAATAT+AGG - chr4_3:4482255-4482274 Msa0625460:five_prime_UTR 35.0%
! GGAAATGTCCTCCATATTTT+TGG - chr4_3:4482276-4482295 Msa0625460:five_prime_UTR 35.0%
GTTTGCTTCAATGATCATCA+AGG + chr4_3:4482364-4482383 None:intergenic 35.0%
!! GAAGAAGAAGTGTTTCTGCT+TGG - chr4_3:4475798-4475817 Msa0625460:three_prime_UTR 40.0%
!! AGAAGTGTTTCTGCTTGGTT+TGG - chr4_3:4475803-4475822 Msa0625460:three_prime_UTR 40.0%
GAATTCAAAATTCAGCGACC+GGG - chr4_3:4476053-4476072 Msa0625460:CDS 40.0%
GATGAAGATATCATGGAGAC+CGG - chr4_3:4476167-4476186 Msa0625460:intron 40.0%
AGATGATAATACCTACCAGG+GGG + chr4_3:4476247-4476266 None:intergenic 40.0%
CAAACATGTAAGGAGGAAGA+TGG + chr4_3:4476307-4476326 None:intergenic 40.0%
CGAGGAGTAAAAGAATGAAG+AGG + chr4_3:4476375-4476394 None:intergenic 40.0%
! ATTCTTTTACTCCTCGGCTT+TGG - chr4_3:4476379-4476398 Msa0625460:CDS 40.0%
TTAACCTGAACCATTTCAGG+GGG + chr4_3:4476526-4476545 None:intergenic 40.0%
ATGGAGCTGAAGGATTTATC+CGG - chr4_3:4476640-4476659 Msa0625460:intron 40.0%
TCCAGCAAAACCTGAACAAA+GGG + chr4_3:4476904-4476923 None:intergenic 40.0%
ATCCAGCAAAACCTGAACAA+AGG + chr4_3:4476905-4476924 None:intergenic 40.0%
! TCAGGTTTTGCTGGATATGT+AGG - chr4_3:4476909-4476928 Msa0625460:intron 40.0%
! CAGGTTTTGCTGGATATGTA+GGG - chr4_3:4476910-4476929 Msa0625460:intron 40.0%
AGCTCTTATCGTTGTTGGTA+TGG - chr4_3:4477118-4477137 Msa0625460:intron 40.0%
GTTGTTGGTATGGCTGTAAT+CGG - chr4_3:4477128-4477147 Msa0625460:intron 40.0%
! TGCCACATTTTATGTTTGGC+TGG - chr4_3:4477166-4477185 Msa0625460:intron 40.0%
! GCCACATTTTATGTTTGGCT+GGG - chr4_3:4477167-4477186 Msa0625460:intron 40.0%
TCCCAGCCAAACATAAAATG+TGG + chr4_3:4477171-4477190 None:intergenic 40.0%
! ATTTTATGTTTGGCTGGGAG+TGG - chr4_3:4477172-4477191 Msa0625460:intron 40.0%
! TTTTATGTTTGGCTGGGAGT+GGG - chr4_3:4477173-4477192 Msa0625460:intron 40.0%
TTTGTCTTTACTGCTAGGGA+TGG - chr4_3:4477584-4477603 Msa0625460:CDS 40.0%
TTGTCTTTACTGCTAGGGAT+GGG - chr4_3:4477585-4477604 Msa0625460:CDS 40.0%
CTCCTAGTTGGATATGGATT+TGG - chr4_3:4477695-4477714 Msa0625460:intron 40.0%
CACCAAATCCATATCCAACT+AGG + chr4_3:4477700-4477719 None:intergenic 40.0%
TACTAAAGCAGCTGATGTTG+GGG - chr4_3:4477763-4477782 Msa0625460:intron 40.0%
!! CCTGTTCTACTTTTCCAACA+AGG + chr4_3:4477793-4477812 None:intergenic 40.0%
CCTTGTTGGAAAAGTAGAAC+AGG - chr4_3:4477790-4477809 Msa0625460:intron 40.0%
GCAATAACAGCAGGATTTCT+AGG + chr4_3:4477833-4477852 None:intergenic 40.0%
CAATTTGAATGTGCAGAGTG+TGG + chr4_3:4477901-4477920 None:intergenic 40.0%
GTAGTAATCTATGGAAACCC+TGG + chr4_3:4477938-4477957 None:intergenic 40.0%
CTGCTTTAATACAGGATTGC+AGG + chr4_3:4478350-4478369 None:intergenic 40.0%
GCAATCCTGTATTAAAGCAG+AGG - chr4_3:4478350-4478369 Msa0625460:CDS 40.0%
CCATTCCTCTGCTTTAATAC+AGG + chr4_3:4478358-4478377 None:intergenic 40.0%
CCTGTATTAAAGCAGAGGAA+TGG - chr4_3:4478355-4478374 Msa0625460:CDS 40.0%
GTATTAAAGCAGAGGAATGG+TGG - chr4_3:4478358-4478377 Msa0625460:CDS 40.0%
CTTAGGCACTAAGAACAGAT+TGG - chr4_3:4478409-4478428 Msa0625460:CDS 40.0%
!! ACTAAGAACAGATTGGTCTG+CGG - chr4_3:4478416-4478435 Msa0625460:CDS 40.0%
GACTCTCGAATTTCTTGGAA+GGG + chr4_3:4478455-4478474 None:intergenic 40.0%
AGACTCTCGAATTTCTTGGA+AGG + chr4_3:4478456-4478475 None:intergenic 40.0%
TCCAAGAAATTCGAGAGTCT+TGG - chr4_3:4478456-4478475 Msa0625460:CDS 40.0%
ACCAAGACTCTCGAATTTCT+TGG + chr4_3:4478460-4478479 None:intergenic 40.0%
TGAGAAAGGAAAGAGGAAAG+TGG + chr4_3:4478549-4478568 None:intergenic 40.0%
TATGATACCACTGGAAGTAG+AGG + chr4_3:4478937-4478956 None:intergenic 40.0%
!! TTCTAAGGTTGGAGACAATG+TGG - chr4_3:4478972-4478991 Msa0625460:CDS 40.0%
! TCTAAGGTTGGAGACAATGT+GGG - chr4_3:4478973-4478992 Msa0625460:CDS 40.0%
AATCAGTGCCATGATACTAG+GGG - chr4_3:4479047-4479066 Msa0625460:CDS 40.0%
TCTTCTGATTCAGATCCATC+TGG - chr4_3:4479183-4479202 Msa0625460:intron 40.0%
TGATCTGGTAGTTTCATCTG+TGG - chr4_3:4479239-4479258 Msa0625460:intron 40.0%
GATCTGGTAGTTTCATCTGT+GGG - chr4_3:4479240-4479259 Msa0625460:intron 40.0%
ATCTGGACTAATGACTCCTA+TGG - chr4_3:4479290-4479309 Msa0625460:intron 40.0%
ATTGCCATAGGATCTTCCAT+AGG + chr4_3:4479309-4479328 None:intergenic 40.0%
! CCTTTCTGAAGAATTGCCAT+AGG + chr4_3:4479321-4479340 None:intergenic 40.0%
CCTATGGCAATTCTTCAGAA+AGG - chr4_3:4479318-4479337 Msa0625460:intron 40.0%
!!! GTTTTAGCTGTTCTGGCATT+TGG - chr4_3:4479357-4479376 Msa0625460:intron 40.0%
TAATTACTCTGCAGTCTACC+CGG - chr4_3:4479585-4479604 Msa0625460:intron 40.0%
CTCAACATAAAGTAACCACC+GGG + chr4_3:4479606-4479625 None:intergenic 40.0%
GCTCAACATAAAGTAACCAC+CGG + chr4_3:4479607-4479626 None:intergenic 40.0%
GCAAAATTGAACCATGCTGA+AGG + chr4_3:4479635-4479654 None:intergenic 40.0%
! GGTTCAATTTTGCTTTGTGC+GGG - chr4_3:4479642-4479661 Msa0625460:intron 40.0%
! TCACAGCGTACATTTTTGTC+TGG - chr4_3:4479678-4479697 Msa0625460:intron 40.0%
!! TTAGCTCTTTCTAGCTCTAC+TGG - chr4_3:4479746-4479765 Msa0625460:intron 40.0%
CAGCAATTATGTTAGTGCCA+TGG + chr4_3:4479772-4479791 None:intergenic 40.0%
CATGGCACTAACATAATTGC+TGG - chr4_3:4479770-4479789 Msa0625460:intron 40.0%
TGGCACTAACATAATTGCTG+GGG - chr4_3:4479772-4479791 Msa0625460:intron 40.0%
!! CATAATTGCTGGGGTTAGTT+TGG - chr4_3:4479781-4479800 Msa0625460:intron 40.0%
!! TAATTGCTGGGGTTAGTTTG+GGG - chr4_3:4479783-4479802 Msa0625460:intron 40.0%
GCTGGACTAATAGATGAAAC+AGG - chr4_3:4479878-4479897 Msa0625460:intron 40.0%
CGCTGCTTATATTCTTACCA+TGG - chr4_3:4479958-4479977 Msa0625460:intron 40.0%
GACACTTTCAGGCTGATAAT+AGG + chr4_3:4480113-4480132 None:intergenic 40.0%
AGAACCAATGGCAAATCCTT+TGG + chr4_3:4480188-4480207 None:intergenic 40.0%
AGCACTAAACAGAAGGAAAG+AGG + chr4_3:4480221-4480240 None:intergenic 40.0%
CCATGTAAGCACTAAACAGA+AGG + chr4_3:4480228-4480247 None:intergenic 40.0%
CCTTCTGTTTAGTGCTTACA+TGG - chr4_3:4480225-4480244 Msa0625460:intron 40.0%
GTTTAGTGCTTACATGGATG+AGG - chr4_3:4480231-4480250 Msa0625460:CDS 40.0%
! TTCTCGCGAACCTTTTAAAC+AGG - chr4_3:4480264-4480283 Msa0625460:CDS 40.0%
GTTCTGCACACCTGTTTAAA+AGG + chr4_3:4480277-4480296 None:intergenic 40.0%
TTTAAACAGGTGTGCAGAAC+TGG - chr4_3:4480277-4480296 Msa0625460:CDS 40.0%
! ACCAACGAAAACTTCTGGAA+TGG + chr4_3:4480402-4480421 None:intergenic 40.0%
! ATTCCAGAAGTTTTCGTTGG+TGG - chr4_3:4480401-4480420 Msa0625460:intron 40.0%
! TTCCAGAAGTTTTCGTTGGT+GGG - chr4_3:4480402-4480421 Msa0625460:intron 40.0%
TAAGAAGGCAGTTCATTGAG+AGG - chr4_3:4480510-4480529 Msa0625460:intron 40.0%
ACAGGATTACAAGGAGAAAC+CGG - chr4_3:4480635-4480654 Msa0625460:intron 40.0%
GATGATAAAACCTGGTGCTT+TGG - chr4_3:4480704-4480723 Msa0625460:intron 40.0%
AACTCGGAGATAAGAGAGAT+AGG + chr4_3:4481036-4481055 None:intergenic 40.0%
TTTCTATGACCTGGTCTGAT+TGG - chr4_3:4481397-4481416 Msa0625460:CDS 40.0%
! CGAATTTTGGGCTACTATAC+AGG - chr4_3:4481512-4481531 Msa0625460:intron 40.0%
GTACTTCTTTGCATTATCCC+AGG + chr4_3:4481636-4481655 None:intergenic 40.0%
! GCAAAGAAGTACATAGAGAC+CGG - chr4_3:4481644-4481663 Msa0625460:CDS 40.0%
GATGCTCTCAACGATTACAT+TGG - chr4_3:4482042-4482061 Msa0625460:five_prime_UTR 40.0%
AACAACTCTCACAGGAAGAT+GGG + chr4_3:4482076-4482095 None:intergenic 40.0%
GCAATATCAACAACTCTCAC+AGG + chr4_3:4482084-4482103 None:intergenic 40.0%
AATTATGTGTTCCCATGCGT+TGG - chr4_3:4482307-4482326 Msa0625460:five_prime_UTR 40.0%
AGGACTATACTCACCTCCTT+GGG + chr4_3:4476102-4476121 None:intergenic 45.0%
AAGGACTATACTCACCTCCT+TGG + chr4_3:4476103-4476122 None:intergenic 45.0%
ACTCTCCGTACAACTGGAAA+AGG + chr4_3:4476122-4476141 None:intergenic 45.0%
GAATTCACTCTCCGTACAAC+TGG + chr4_3:4476128-4476147 None:intergenic 45.0%
GGAAAGTTCTTGGCCTATCA+TGG + chr4_3:4476199-4476218 None:intergenic 45.0%
CGCATGTTAGGGAAAGTTCT+TGG + chr4_3:4476209-4476228 None:intergenic 45.0%
GATGATAATACCTACCAGGG+GGG + chr4_3:4476246-4476265 None:intergenic 45.0%
AAAAGATAGCTCCAAAGCCG+AGG + chr4_3:4476393-4476412 None:intergenic 45.0%
AAGGTCAGGACAAGAGTTGA+TGG + chr4_3:4476584-4476603 None:intergenic 45.0%
ATAGCTGATGCCATACGAGA+TGG - chr4_3:4476621-4476640 Msa0625460:intron 45.0%
GGATTTATCCGGACACAGTA+TGG - chr4_3:4476651-4476670 Msa0625460:intron 45.0%
AGCAAGCAACATAGCCATCT+TGG + chr4_3:4476685-4476704 None:intergenic 45.0%
AAGCTTCCTGTTGAGGAGTT+GGG + chr4_3:4476740-4476759 None:intergenic 45.0%
!! CTGAACAAAGGGCACCTAAA+AGG + chr4_3:4476893-4476912 None:intergenic 45.0%
!! CTTTTAGGTGCCCTTTGTTC+AGG - chr4_3:4476891-4476910 Msa0625460:intron 45.0%
TTGCTGGATATGTAGGGATG+TGG - chr4_3:4476916-4476935 Msa0625460:intron 45.0%
TGCTGGATATGTAGGGATGT+GGG - chr4_3:4476917-4476936 Msa0625460:intron 45.0%
TCAGTGACCTTCATTGAACC+AGG + chr4_3:4477203-4477222 None:intergenic 45.0%
!! GGAGCATTACCTGCATCTTT+TGG - chr4_3:4477606-4477625 Msa0625460:CDS 45.0%
CCATATCCAACTAGGAGAAG+AGG + chr4_3:4477692-4477711 None:intergenic 45.0%
CCTCTTCTCCTAGTTGGATA+TGG - chr4_3:4477689-4477708 Msa0625460:intron 45.0%
AGCAAACAGTGCAACAAAGG+AGG + chr4_3:4477723-4477742 None:intergenic 45.0%
CTGAGCAAACAGTGCAACAA+AGG + chr4_3:4477726-4477745 None:intergenic 45.0%
TGTTGCACTGTTTGCTCAGT+TGG - chr4_3:4477727-4477746 Msa0625460:intron 45.0%
GTTGCACTGTTTGCTCAGTT+GGG - chr4_3:4477728-4477747 Msa0625460:intron 45.0%
!! GGATTTCTAGGGTCATCTTC+AGG + chr4_3:4477821-4477840 None:intergenic 45.0%
!! CTTGTTTTTCTCAGGGCCAT+AGG - chr4_3:4477957-4477976 Msa0625460:CDS 45.0%
CCTCTCTCTCATTCTTGGAA+GGG + chr4_3:4478487-4478506 None:intergenic 45.0%
ACCTCTCTCTCATTCTTGGA+AGG + chr4_3:4478488-4478507 None:intergenic 45.0%
AGAGACCTCTCTCTCATTCT+TGG + chr4_3:4478492-4478511 None:intergenic 45.0%
ATCAGTGCCATGATACTAGG+GGG - chr4_3:4479048-4479067 Msa0625460:CDS 45.0%
CATTGTTCCCCCTAGTATCA+TGG + chr4_3:4479058-4479077 None:intergenic 45.0%
CATGATACTAGGGGGAACAA+TGG - chr4_3:4479056-4479075 Msa0625460:CDS 45.0%
GCACAACGCTGTAAAATCGA+AGG - chr4_3:4479078-4479097 Msa0625460:CDS 45.0%
GGAAACAAGATGAAGCCAGA+TGG + chr4_3:4479201-4479220 None:intergenic 45.0%
GACTCCTATGGAAGATCCTA+TGG - chr4_3:4479302-4479321 Msa0625460:intron 45.0%
!! TTTGCTTTGTGCGGGTTGAT+TGG - chr4_3:4479650-4479669 Msa0625460:intron 45.0%
GATGAAACAGGAAACCCAAC+TGG - chr4_3:4479890-4479909 Msa0625460:intron 45.0%
TATCGGGCCAAACATATCCA+TGG + chr4_3:4479978-4479997 None:intergenic 45.0%
CTCCAGCATTATCAGCTATC+GGG + chr4_3:4479994-4480013 None:intergenic 45.0%
CCTCCAGCATTATCAGCTAT+CGG + chr4_3:4479995-4480014 None:intergenic 45.0%
AATGAGTCAGCAGGTAGTTC+TGG - chr4_3:4480024-4480043 Msa0625460:intron 45.0%
CAAGGACATCAGTGATCTCT+CGG + chr4_3:4480135-4480154 None:intergenic 45.0%
!! AAATCCTTTGGTGGTGGCTT+TGG + chr4_3:4480176-4480195 None:intergenic 45.0%
AATGGCAAATCCTTTGGTGG+TGG + chr4_3:4480182-4480201 None:intergenic 45.0%
ACCACCAAAGGATTTGCCAT+TGG - chr4_3:4480181-4480200 Msa0625460:intron 45.0%
ACCAATGGCAAATCCTTTGG+TGG + chr4_3:4480185-4480204 None:intergenic 45.0%
! GAACTGGCTCCCATCTTATT+AGG - chr4_3:4480293-4480312 Msa0625460:CDS 45.0%
TGCAATTGAGGGAAAAGGAG+AGG - chr4_3:4480330-4480349 Msa0625460:CDS 45.0%
! GCCATTCCAGAAGTTTTCGT+TGG - chr4_3:4480398-4480417 Msa0625460:intron 45.0%
AACCCACCAACGAAAACTTC+TGG + chr4_3:4480407-4480426 None:intergenic 45.0%
TAACAACCTCCTGTGCAGTT+CGG + chr4_3:4480484-4480503 None:intergenic 45.0%
CATTGAGAGGCCTGGTATAA+TGG - chr4_3:4480523-4480542 Msa0625460:intron 45.0%
! GAAATGATTGCCAAAGCACC+AGG + chr4_3:4480717-4480736 None:intergenic 45.0%
CAGTTAGCCCAAATGCAACA+AGG + chr4_3:4481234-4481253 None:intergenic 45.0%
AACAGATCACCAATCAGACC+AGG + chr4_3:4481409-4481428 None:intergenic 45.0%
TATACAGGGCAACCCTTACT+CGG - chr4_3:4481527-4481546 Msa0625460:intron 45.0%
ACAACTTTAGCCCCGAGTAA+GGG + chr4_3:4481542-4481561 None:intergenic 45.0%
CTGATGTTTGCAACAGTGTC+TGG - chr4_3:4481572-4481591 Msa0625460:CDS 45.0%
!!! GCACTTTTTCTGAACACAGC+TGG - chr4_3:4481605-4481624 Msa0625460:CDS 45.0%
! CTTTTTCTGAACACAGCTGG+TGG - chr4_3:4481608-4481627 Msa0625460:CDS 45.0%
GCTCACAAAGCAGCAATAAC+AGG - chr4_3:4481692-4481711 Msa0625460:CDS 45.0%
GACCAGCAGTGTCTTTGAAT+GGG + chr4_3:4482000-4482019 None:intergenic 45.0%
CAACAACTCTCACAGGAAGA+TGG + chr4_3:4482077-4482096 None:intergenic 45.0%
AGGAACGAACACGAACACGA+AGG - chr4_3:4475762-4475781 Msa0625460:three_prime_UTR 50.0%
AAAATTCAGCGACCGGGTTC+AGG - chr4_3:4476059-4476078 Msa0625460:CDS 50.0%
AAATTCAGCGACCGGGTTCA+GGG - chr4_3:4476060-4476079 Msa0625460:CDS 50.0%
GGACTATACTCACCTCCTTG+GGG + chr4_3:4476101-4476120 None:intergenic 50.0%
AGACCGGCACTTACCATGAT+AGG - chr4_3:4476183-4476202 Msa0625460:intron 50.0%
TGGCCTATCATGGTAAGTGC+CGG + chr4_3:4476189-4476208 None:intergenic 50.0%
TTCTAAACCTTACACCCCCC+TGG - chr4_3:4476229-4476248 Msa0625460:intron 50.0%
TGGGTGCTCGCTAAAGATGA+GGG - chr4_3:4476499-4476518 Msa0625460:CDS 50.0%
TCCTTCAGCTCCATCTCGTA+TGG + chr4_3:4476634-4476653 None:intergenic 50.0%
GAAGCTTCCTGTTGAGGAGT+TGG + chr4_3:4476741-4476760 None:intergenic 50.0%
ACTCCTCAACAGGAAGCTTC+TGG - chr4_3:4476741-4476760 Msa0625460:intron 50.0%
ATGCCAGAAGCTTCCTGTTG+AGG + chr4_3:4476747-4476766 None:intergenic 50.0%
TCAACAGGAAGCTTCTGGCA+TGG - chr4_3:4476746-4476765 Msa0625460:intron 50.0%
CAACAGGAAGCTTCTGGCAT+GGG - chr4_3:4476747-4476766 Msa0625460:intron 50.0%
!! GCCCTTTGTTCAGGTTTTGC+TGG - chr4_3:4476900-4476919 Msa0625460:intron 50.0%
AGCACTAGAGACTCTGACGT+TGG + chr4_3:4476955-4476974 None:intergenic 50.0%
!! GTCTTCAAGAGAGGCATTGC+AGG - chr4_3:4476983-4477002 Msa0625460:intron 50.0%
CTACAGATAGCTACTCGAGC+AGG - chr4_3:4477086-4477105 Msa0625460:intron 50.0%
!! ACTAGGAGAAGAGGCACTGA+CGG + chr4_3:4477683-4477702 None:intergenic 50.0%
TCAGTGCCTCTTCTCCTAGT+TGG - chr4_3:4477683-4477702 Msa0625460:intron 50.0%
TCCTGCTGTTATTGCTGACC+TGG - chr4_3:4477838-4477857 Msa0625460:CDS 50.0%
ACCAGGTCAGCAATAACAGC+AGG + chr4_3:4477842-4477861 None:intergenic 50.0%
CCCTTCCAAGAATGAGAGAG+AGG - chr4_3:4478484-4478503 Msa0625460:intron 50.0%
CCACTGGAAGTAGAGGACTA+GGG + chr4_3:4478930-4478949 None:intergenic 50.0%
ACCACTGGAAGTAGAGGACT+AGG + chr4_3:4478931-4478950 None:intergenic 50.0%
ATTCGGGGTACACGTGAATC+TGG - chr4_3:4479273-4479292 Msa0625460:intron 50.0%
AGCTGTTCTGGCATTTGGTC+TGG - chr4_3:4479362-4479381 Msa0625460:intron 50.0%
TTGAGCAAGCACCTTCAGCA+TGG - chr4_3:4479621-4479640 Msa0625460:intron 50.0%
GAAAGAGCTAATGTGCGCAC+AGG + chr4_3:4479737-4479756 None:intergenic 50.0%
!! CTTTCTAGCTCTACTGGCCA+TGG - chr4_3:4479752-4479771 Msa0625460:intron 50.0%
! AGTTTGGGGCTGGAATCTAC+TGG - chr4_3:4479797-4479816 Msa0625460:intron 50.0%
!! GCTGGAATCTACTGGTCTTC+CGG - chr4_3:4479805-4479824 Msa0625460:intron 50.0%
CAATCGCCACACTGATGACA+AGG + chr4_3:4479832-4479851 None:intergenic 50.0%
CATCAGTGTGGCGATTGTCT+CGG - chr4_3:4479835-4479854 Msa0625460:intron 50.0%
GAAACAGGAAACCCAACTGG+CGG - chr4_3:4479893-4479912 Msa0625460:intron 50.0%
AAACAGGAAACCCAACTGGC+GGG - chr4_3:4479894-4479913 Msa0625460:intron 50.0%
TGGCACAGCTGTAGCAACAA+TGG - chr4_3:4479922-4479941 Msa0625460:intron 50.0%
GGCACAGCTGTAGCAACAAT+GGG - chr4_3:4479923-4479942 Msa0625460:intron 50.0%
! CCGATAGCTGATAATGCTGG+AGG - chr4_3:4479992-4480011 Msa0625460:intron 50.0%
GTGATCTCTCGGACACTTTC+AGG + chr4_3:4480124-4480143 None:intergenic 50.0%
ACTGATGTCCTTGATGCCGT+GGG - chr4_3:4480142-4480161 Msa0625460:intron 50.0%
TTGTGTTACCCACGGCATCA+AGG + chr4_3:4480153-4480172 None:intergenic 50.0%
! GGCTTTGGTTGTGTTACCCA+CGG + chr4_3:4480161-4480180 None:intergenic 50.0%
ACAACCAAAGCCACCACCAA+AGG - chr4_3:4480169-4480188 Msa0625460:intron 50.0%
AGGGAAAAGGAGAGGAAGTG+TGG - chr4_3:4480338-4480357 Msa0625460:CDS 50.0%
!!! AGTTTTCGTTGGTGGGTTGC+TGG - chr4_3:4480409-4480428 Msa0625460:intron 50.0%
!!! GTTTTCGTTGGTGGGTTGCT+GGG - chr4_3:4480410-4480429 Msa0625460:intron 50.0%
GCAACACAGCGAGCATAATC+CGG + chr4_3:4480657-4480676 None:intergenic 50.0%
ATACAGGGCAACCCTTACTC+GGG - chr4_3:4481528-4481547 Msa0625460:intron 50.0%
CACAACTTTAGCCCCGAGTA+AGG + chr4_3:4481543-4481562 None:intergenic 50.0%
CTTACTCGGGGCTAAAGTTG+TGG - chr4_3:4481541-4481560 Msa0625460:intron 50.0%
TACATAGAGACCGGAGCTCT+TGG - chr4_3:4481653-4481672 Msa0625460:CDS 50.0%
GACCCATTCAAAGACACTGC+TGG - chr4_3:4481995-4482014 Msa0625460:five_prime_UTR 50.0%
GGACCAGCAGTGTCTTTGAA+TGG + chr4_3:4482001-4482020 None:intergenic 50.0%
AATTCAGCGACCGGGTTCAG+GGG - chr4_3:4476061-4476080 Msa0625460:CDS 55.0%
CTATACTCACCTCCTTGGGG+TGG + chr4_3:4476098-4476117 None:intergenic 55.0%
AAACCTTACACCCCCCTGGT+AGG - chr4_3:4476233-4476252 Msa0625460:intron 55.0%
! ATACCTACCAGGGGGGTGTA+AGG + chr4_3:4476239-4476258 None:intergenic 55.0%
GTGGGTGCTCGCTAAAGATG+AGG - chr4_3:4476498-4476517 Msa0625460:CDS 55.0%
AGATGAGGGTCCCCCTGAAA+TGG - chr4_3:4476513-4476532 Msa0625460:CDS 55.0%
GCCATACGAGATGGAGCTGA+AGG - chr4_3:4476630-4476649 Msa0625460:intron 55.0%
AGGAAGCTTCTGGCATGGGA+AGG - chr4_3:4476751-4476770 Msa0625460:intron 55.0%
GAGTCTCTAGTGCTGCGAGA+CGG - chr4_3:4476961-4476980 Msa0625460:intron 55.0%
TGCGAGACGGTCTTCAAGAG+AGG - chr4_3:4476974-4476993 Msa0625460:intron 55.0%
CAGATAGCTACTCGAGCAGG+TGG - chr4_3:4477089-4477108 Msa0625460:intron 55.0%
GGGCACACCTGGTTCAATGA+AGG - chr4_3:4477193-4477212 Msa0625460:intron 55.0%
GCACTGTTTGCTCAGTTGGG+TGG - chr4_3:4477731-4477750 Msa0625460:intron 55.0%
CTGTTTGCTCAGTTGGGTGG+TGG - chr4_3:4477734-4477753 Msa0625460:intron 55.0%
GATGTTGGGGCAGACCTTGT+TGG - chr4_3:4477776-4477795 Msa0625460:intron 55.0%
CTGGAAGTAGAGGACTAGGG+AGG + chr4_3:4478927-4478946 None:intergenic 55.0%
CCCTAGTCCTCTACTTCCAG+TGG - chr4_3:4478927-4478946 Msa0625460:CDS 55.0%
! GTGGGAGATTGTGCTGCTAG+AGG - chr4_3:4478991-4479010 Msa0625460:CDS 55.0%
TTACTCTGCAGTCTACCCGG+TGG - chr4_3:4479588-4479607 Msa0625460:intron 55.0%
TCCGGTCCTTGTCATCAGTG+TGG - chr4_3:4479823-4479842 Msa0625460:intron 55.0%
GCCACACTGATGACAAGGAC+CGG + chr4_3:4479827-4479846 None:intergenic 55.0%
! ATTGTCTCGGCCTACTGGCT+GGG - chr4_3:4479848-4479867 Msa0625460:intron 55.0%
! GGCCCGATAGCTGATAATGC+TGG - chr4_3:4479989-4480008 Msa0625460:intron 55.0%
CACTGATGTCCTTGATGCCG+TGG - chr4_3:4480141-4480160 Msa0625460:intron 55.0%
AGGCAGTTCATTGAGAGGCC+TGG - chr4_3:4480515-4480534 Msa0625460:intron 55.0%
TACAGGGCAACCCTTACTCG+GGG - chr4_3:4481529-4481548 Msa0625460:intron 55.0%
ATAGAGACCGGAGCTCTTGG+AGG - chr4_3:4481656-4481675 Msa0625460:CDS 55.0%
! GGTCTTGGTGACCAACGCAT+GGG + chr4_3:4482321-4482340 None:intergenic 55.0%
! AGGTCTTGGTGACCAACGCA+TGG + chr4_3:4482322-4482341 None:intergenic 55.0%
ATTCAGCGACCGGGTTCAGG+GGG - chr4_3:4476062-4476081 Msa0625460:CDS 60.0%
GGTAAGTCACCCCCTGAACC+CGG + chr4_3:4476074-4476093 None:intergenic 60.0%
GGTGACTTACCACCACCCCA+AGG - chr4_3:4476083-4476102 Msa0625460:intron 60.0%
GACTTACCACCACCCCAAGG+AGG - chr4_3:4476086-4476105 Msa0625460:intron 60.0%
TACTCACCTCCTTGGGGTGG+TGG + chr4_3:4476095-4476114 None:intergenic 60.0%
GGGTCCCCCTGAAATGGTTC+AGG - chr4_3:4476519-4476538 Msa0625460:CDS 60.0%
TCGCAGCCCAACTCCTCAAC+AGG - chr4_3:4476731-4476750 Msa0625460:intron 60.0%
!! TGCTGGGGTTAGTTTGGGGC+TGG - chr4_3:4479787-4479806 Msa0625460:intron 60.0%
TGGCGATTGTCTCGGCCTAC+TGG - chr4_3:4479843-4479862 Msa0625460:intron 60.0%
GATTGTCTCGGCCTACTGGC+TGG - chr4_3:4479847-4479866 Msa0625460:intron 60.0%
AGCAGTCTGTCCCAGCCAGT+AGG + chr4_3:4479861-4479880 None:intergenic 60.0%
! TACTGGCTGGGACAGACTGC+TGG - chr4_3:4479860-4479879 Msa0625460:intron 60.0%
!! AACCCAACTGGCGGGCTGTT+TGG - chr4_3:4479902-4479921 Msa0625460:intron 60.0%
TGCCAAACAGCCCGCCAGTT+GGG + chr4_3:4479907-4479926 None:intergenic 60.0%
GGCAAGCGCAGCAGAACCAA+TGG + chr4_3:4480200-4480219 None:intergenic 60.0%
CTGTGCAGTTCGGCCAACAG+CGG + chr4_3:4480474-4480493 None:intergenic 60.0%
TGTTGGCCGAACTGCACAGG+AGG - chr4_3:4480475-4480494 Msa0625460:intron 60.0%
! TGAACACAGCTGGTGGTGCC+TGG - chr4_3:4481615-4481634 Msa0625460:CDS 60.0%
! GAACACAGCTGGTGGTGCCT+GGG - chr4_3:4481616-4481635 Msa0625460:CDS 60.0%
ACCGGAGCTCTTGGAGGCAA+GGG - chr4_3:4481662-4481681 Msa0625460:CDS 60.0%
TCCCTTGCCTCCAAGAGCTC+CGG + chr4_3:4481666-4481685 None:intergenic 60.0%
GTGCCAAACAGCCCGCCAGT+TGG + chr4_3:4479908-4479927 None:intergenic 65.0%
! GCTTGGGCTTGTGCCGCTGT+TGG - chr4_3:4480458-4480477 Msa0625460:intron 65.0%
CGCTGTTGGCCGAACTGCAC+AGG - chr4_3:4480472-4480491 Msa0625460:intron 65.0%
GACCGGAGCTCTTGGAGGCA+AGG - chr4_3:4481661-4481680 Msa0625460:CDS 65.0%
TGGCTGGGAGTGGGCACACC+TGG - chr4_3:4477182-4477201 Msa0625460:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 4475703 4482386 4475703 ID=Msa0625460;Name=Msa0625460
chr4_3 mRNA 4475703 4482386 4475703 ID=Msa0625460-mRNA-1;Parent=Msa0625460;Name=Msa0625460-mRNA-1;_AED=0.06;_eAED=0.06;_QI=314|1|0.84|1|0.91|0.76|13|299|859
chr4_3 exon 4475703 4476101 4475703 ID=Msa0625460-mRNA-1:exon:1220;Parent=Msa0625460-mRNA-1
chr4_3 exon 4476369 4476588 4476369 ID=Msa0625460-mRNA-1:exon:1219;Parent=Msa0625460-mRNA-1
chr4_3 exon 4477339 4477450 4477339 ID=Msa0625460-mRNA-1:exon:1218;Parent=Msa0625460-mRNA-1
chr4_3 exon 4477545 4477700 4477545 ID=Msa0625460-mRNA-1:exon:1217;Parent=Msa0625460-mRNA-1
chr4_3 exon 4477804 4478490 4477804 ID=Msa0625460-mRNA-1:exon:1216;Parent=Msa0625460-mRNA-1
chr4_3 exon 4478706 4479110 4478706 ID=Msa0625460-mRNA-1:exon:1215;Parent=Msa0625460-mRNA-1
chr4_3 exon 4480230 4480402 4480230 ID=Msa0625460-mRNA-1:exon:1214;Parent=Msa0625460-mRNA-1
chr4_3 exon 4480865 4480997 4480865 ID=Msa0625460-mRNA-1:exon:1213;Parent=Msa0625460-mRNA-1
chr4_3 exon 4481085 4481232 4481085 ID=Msa0625460-mRNA-1:exon:1212;Parent=Msa0625460-mRNA-1
chr4_3 exon 4481317 4481468 4481317 ID=Msa0625460-mRNA-1:exon:1211;Parent=Msa0625460-mRNA-1
chr4_3 exon 4481549 4481752 4481549 ID=Msa0625460-mRNA-1:exon:1210;Parent=Msa0625460-mRNA-1
chr4_3 exon 4481839 4482089 4481839 ID=Msa0625460-mRNA-1:exon:1209;Parent=Msa0625460-mRNA-1
chr4_3 exon 4482234 4482386 4482234 ID=Msa0625460-mRNA-1:exon:1208;Parent=Msa0625460-mRNA-1
chr4_3 five_prime_UTR 4482234 4482386 4482234 ID=Msa0625460-mRNA-1:five_prime_utr;Parent=Msa0625460-mRNA-1
chr4_3 five_prime_UTR 4481929 4482089 4481929 ID=Msa0625460-mRNA-1:five_prime_utr;Parent=Msa0625460-mRNA-1
chr4_3 CDS 4481839 4481928 4481839 ID=Msa0625460-mRNA-1:cds;Parent=Msa0625460-mRNA-1
chr4_3 CDS 4481549 4481752 4481549 ID=Msa0625460-mRNA-1:cds;Parent=Msa0625460-mRNA-1
chr4_3 CDS 4481317 4481468 4481317 ID=Msa0625460-mRNA-1:cds;Parent=Msa0625460-mRNA-1
chr4_3 CDS 4481085 4481232 4481085 ID=Msa0625460-mRNA-1:cds;Parent=Msa0625460-mRNA-1
chr4_3 CDS 4480865 4480997 4480865 ID=Msa0625460-mRNA-1:cds;Parent=Msa0625460-mRNA-1
chr4_3 CDS 4480230 4480402 4480230 ID=Msa0625460-mRNA-1:cds;Parent=Msa0625460-mRNA-1
chr4_3 CDS 4478706 4479110 4478706 ID=Msa0625460-mRNA-1:cds;Parent=Msa0625460-mRNA-1
chr4_3 CDS 4477804 4478490 4477804 ID=Msa0625460-mRNA-1:cds;Parent=Msa0625460-mRNA-1
chr4_3 CDS 4477545 4477700 4477545 ID=Msa0625460-mRNA-1:cds;Parent=Msa0625460-mRNA-1
chr4_3 CDS 4477339 4477450 4477339 ID=Msa0625460-mRNA-1:cds;Parent=Msa0625460-mRNA-1
chr4_3 CDS 4476369 4476588 4476369 ID=Msa0625460-mRNA-1:cds;Parent=Msa0625460-mRNA-1
chr4_3 CDS 4476002 4476101 4476002 ID=Msa0625460-mRNA-1:cds;Parent=Msa0625460-mRNA-1
chr4_3 three_prime_UTR 4475703 4476001 4475703 ID=Msa0625460-mRNA-1:three_prime_utr;Parent=Msa0625460-mRNA-1
Gene Sequence

>Msa0625460

ATGATGGATGAAGATATCATGGAGACCGGCACTTACCATGATAGGCCAAGAACTTTCCCTAACATGCGTTCTAAACCTTACACCCCCCTGATATTTCGTATTCTACTCGGTATAAATGTTCGTGTCCTCTTCATTCTTTTACTCCTCGGCTTTGGAGCTATCTTTTACATGGGTGCAAGTACTTCTCCAATTATTGTCTTTGTCATCACCATTTGTATTCTCAGCTTCCTTGTCGCCATATATCTTATGAAGTGGGTGCTCGCTAAAGATGAGGGTCCCCCTGAAATGGTTCAGATAGCTGATGCCATACGAGATGGAGCTGAAGGATTTATCCGGACACAGTATGGAACTATATCCAAGATGGCTATGTTGCTTGCTCTTGTCATTCTTTTCATATATTTGTTTCGCAGCCCAACTCCTCAACAGGAAGCTTCTGGCATGGGAAGGACAACATCTGCATGCATCACTGTAGCTTCTTTCCTTTTAGGTGCCCTTTGTTCAGGTTTTGCTGGATATGTAGGGATGTGGGTGTCAGTTCGTGCCAACGTCAGAGTCTCTAGTGCTGCGAGACGGTCTTCAAGAGAGGCATTGCAGATAGCTACTCGAGCAGGTGGTTTATCAGCTCTTATCGTTGTTGGTATGGCTGTAATCGGTATAGCAGTCCTTTATGCCACATTTTATGTTTGGCTGGGAGTGGGCACACCTGGTTCAATGAAGGTCACTGATTTGCCTCTTCTCCTAGTTGGATATGGATTTGGTGCCTCCTTTGTTGCACTGTTTGCTCAGTTGGGTGGTGGAATATATACTAAAGCAGCTGATGTTGGGGCAGACCTTGTTGGAAAAGTAGAACAGGGAATACCTGAAGATGACCCTAGAAATCCTGCTGTTATTGCTGACCTGGTTGGAGACAATGTGGGAGATTGTGCTGCTAGAGGTGCTGATCTTTTTGAAAGCATTGCAGCTGAAATAATCAGTGCCATGATACTAGGGGGAACAATGGCACAACGCTGTAAAATCGAAGGCAAGTACCCAGTTACTCCATATTGTCTCTTTATTGCTTTGTTTTGGTTTTCACTGAGTTGTATGCATAATTTGATGTTTTTTTCTTCTGATTCAGATCCATCTGGCTTCATCTTGTTTCCTCTTGTTGTTCACTCATTTGATCTGGTAGTTTCATCTGTGGGAATATTTTCTATTCGGGGTACACGTGAATCTGGACTAATGACTCCTATGGAAGATCCTATGGCAATTCTTCAGAAAGGATATTCTGTTACAATAGTTTTAGCTGTTCTGGCATTTGGTCTGTCTACCCGGTGGTTACTTTATGTTGAGCAAGCACCTTCAGCATGGTTCAATTTTGCTTTGTGCGGGTTGATTGGTATTATCACAGCGTACATTTTTGTCTGGATCACCAAGTATTATACTGACTACAAGCATGAGCCTGTGCGCACATTAGCTCTTTCTAGCTCTACTGGCCATGGCACTAACATAATTGCTGGGGTTAGTTTGGGGCTGGAATCTACTGGTCTTCCGGTCCTTGTCATCAGTGTGGCGATTGTCTCGGCCTACTGGCTGGGACAGACTGCTGGACTAATAGATGAAACAGGAAACCCAACTGGCGGGCTGTTTGGCACAGCTGTAGCAACAATGGGAATGCTTAGCACCGCTGCTTATATTCTTACCATGGATATGTTTGGCCCGATAGCTGATAATGCTGGAGGAATTGTAGAAATGAGTCAGCAGGTAGTTCTGGCCAGAACAAATATTTTCCATACTGTTATATTTGAGATTTCTCATGGTACGTATACTGACATTACCTATTATCAGCCTGAAAGTGTCCGAGAGATCACTGATGTCCTTGATGCCGTGGGTAACACAACCAAAGCCACCACCAAAGGATTTGCCATTGGTTCTGCTGCGCTTGCCTCTTTCCTTCTGTTTAGTGCTTACATGGATGAGGTTTCTTCATTTTCTCGCGAACCTTTTAAACAGGTTGATATTGCCATTCCAGAAGTTTTCGTTGGTGGGTTGCTGGGTGCCATGCTTATATTTGTCTTTAGTGCTTGGGCTTGTGCCGCTGTTGGCCGAACTGCACAGGAGGTTGTTAATGAAGTAAGAAGGCAGTTCATTGAGAGGCCTGGTATAATGGATTACAAGGAGAAACCGGATTATGCTCGCTGTGTTGCAATTGTAGCATCTGCATCATTAAGAGAGATGATAAAACCTGGTGCTTTGGCAATCATTTCACCTATTGTAGTTGGTTTTGTATTCCGAATTTTGGGCTACTATACAGGGCAACCCTTACTCGGGGCTAAAGTTGTGGCTGCTTTGCTGATGTTTGCAACAGTGTCTGGTATTCTTATGGCACTTTTTCTGAACACAGCTGGTGGTGCCTGGGATAATGCAAAGAAGTACATAGAGACCGGAGCTCTTGGAGGCAAGGGAAGTGATGCTCACAAAGCAGCAATAACAGGAGACACAGTGGGAGACCCATTCAAAGACACTGCTGGTCCTTCACTTCATGTACTTATAAAGATGCTCTCAACGATTACATTGGTAATGGCTCCCATCTTCCTGTGA
Protein sequence

>Msa0625460

MMDEDIMETGTYHDRPRTFPNMRSKPYTPLIFRILLGINVRVLFILLLLGFGAIFYMGASTSPIIVFVITICILSFLVAIYLMKWVLAKDEGPPEMVQIADAIRDGAEGFIRTQYGTISKMAMLLALVILFIYLFRSPTPQQEASGMGRTTSACITVASFLLGALCSGFAGYVGMWVSVRANVRVSSAARRSSREALQIATRAGGLSALIVVGMAVIGIAVLYATFYVWLGVGTPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQRCKIEGKYPVTPYCLFIALFWFSLSCMHNLMFFSSDSDPSGFILFPLVVHSFDLVVSSVGIFSIRGTRESGLMTPMEDPMAILQKGYSVTIVLAVLAFGLSTRWLLYVEQAPSAWFNFALCGLIGIITAYIFVWITKYYTDYKHEPVRTLALSSSTGHGTNIIAGVSLGLESTGLPVLVISVAIVSAYWLGQTAGLIDETGNPTGGLFGTAVATMGMLSTAAYILTMDMFGPIADNAGGIVEMSQQVVLARTNIFHTVIFEISHGTYTDITYYQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSSFSREPFKQVDIAIPEVFVGGLLGAMLIFVFSAWACAAVGRTAQEVVNEVRRQFIERPGIMDYKEKPDYARCVAIVASASLREMIKPGALAIISPIVVGFVFRILGYYTGQPLLGAKVVAALLMFATVSGILMALFLNTAGGAWDNAKKYIETGALGGKGSDAHKAAITGDTVGDPFKDTAGPSLHVLIKMLSTITLVMAPIFL*