AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0625800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0625800 MtrunA17_Chr4g0001361 97.161 317 6 1 1 314 1 317 0.0 631
Msa0625800 MtrunA17_Chr2g0333851 57.716 324 112 9 4 314 5 316 1.69e-109 320
Msa0625800 MtrunA17_Chr3g0136961 47.302 315 122 13 7 311 6 286 3.05e-73 227
Msa0625800 MtrunA17_Chr1g0150281 45.520 279 120 9 43 311 20 276 2.00e-62 199
Msa0625800 MtrunA17_Chr1g0150271 37.500 264 128 6 45 307 6 233 1.45e-42 147
Msa0625800 MtrunA17_Chr7g0270831 31.046 306 155 9 51 307 100 398 2.22e-37 138
Msa0625800 MtrunA17_Chr2g0288871 34.649 228 102 5 43 223 139 366 6.94e-35 133
Msa0625800 MtrunA17_Chr4g0075201 29.365 252 138 5 6 223 83 328 2.63e-31 122
Msa0625800 MtrunA17_Chr3g0099641 33.654 208 93 5 145 307 234 441 9.52e-30 117
Msa0625800 MtrunA17_Chr2g0322391 25.000 380 162 7 51 307 173 552 1.33e-27 112
Msa0625800 MtrunA17_Chr4g0051181 54.762 84 31 2 140 222 226 303 1.65e-26 108
Msa0625800 MtrunA17_Chr7g0216891 56.098 82 34 2 139 220 198 277 1.42e-25 106
Msa0625800 MtrunA17_Chr4g0060271 57.500 80 32 2 143 222 238 315 1.96e-25 106
Msa0625800 MtrunA17_Chr4g0025051 50.000 84 42 0 139 222 312 395 2.67e-25 105
Msa0625800 MtrunA17_Chr2g0302391 41.284 109 64 0 137 245 186 294 6.81e-25 103
Msa0625800 MtrunA17_Chr4g0025061 33.775 151 76 3 139 265 337 487 3.61e-23 99.8
Msa0625800 MtrunA17_Chr5g0401821 43.200 125 58 4 95 219 145 256 1.07e-21 92.4
Msa0625800 MtrunA17_Chr2g0294231 58.065 62 25 1 161 222 202 262 4.56e-20 89.7
Msa0625800 MtrunA17_Chr4g0053281 60.000 60 24 0 160 219 264 323 9.16e-20 88.2
Msa0625800 MtrunA17_Chr1g0194481 56.452 62 26 1 161 222 157 217 1.59e-19 87.4
Msa0625800 MtrunA17_Chr5g0445311 57.143 63 26 1 160 222 362 423 4.72e-19 87.4
Msa0625800 MtrunA17_Chr5g0445311 50.000 60 28 2 163 222 201 258 1.66e-12 67.8
Msa0625800 MtrunA17_Chr7g0270191 39.655 116 59 4 133 248 126 230 6.07e-19 85.5
Msa0625800 MtrunA17_Chr3g0106491 40.157 127 60 5 120 238 315 433 6.38e-19 87.0
Msa0625800 MtrunA17_Chr3g0106491 53.333 60 26 2 163 222 199 256 1.27e-15 77.4
Msa0625800 MtrunA17_Chr5g0432161 52.055 73 30 2 160 232 419 486 9.81e-19 86.7
Msa0625800 MtrunA17_Chr5g0432161 53.333 60 26 2 163 222 245 302 1.27e-15 77.4
Msa0625800 MtrunA17_Chr3g0101131 57.143 63 26 1 160 222 413 474 1.04e-18 86.7
Msa0625800 MtrunA17_Chr3g0101131 50.000 60 28 2 163 222 244 301 2.65e-12 67.4
Msa0625800 MtrunA17_Chr1g0147881 52.778 72 32 1 150 219 248 319 1.19e-18 85.1
Msa0625800 MtrunA17_Chr1g0150801 52.459 61 28 1 160 220 100 159 2.41e-18 80.9
Msa0625800 MtrunA17_Chr5g0447701 51.948 77 34 3 146 222 238 311 2.45e-18 84.7
Msa0625800 MtrunA17_Chr5g0447701 44.444 63 33 2 160 222 90 150 2.38e-11 63.9
Msa0625800 MtrunA17_Chr4g0051881 51.613 62 29 1 161 222 177 237 2.74e-18 84.0
Msa0625800 MtrunA17_Chr4g0071521 43.299 97 51 2 125 221 212 304 2.86e-18 83.6
Msa0625800 MtrunA17_Chr2g0293481 49.367 79 39 1 157 234 261 339 3.46e-18 84.7
Msa0625800 MtrunA17_Chr7g0263531 52.381 63 29 1 160 222 359 420 6.82e-18 83.6
Msa0625800 MtrunA17_Chr7g0263531 50.725 69 32 2 163 231 190 256 9.57e-17 80.5
Msa0625800 MtrunA17_Chr7g0243891 39.806 103 57 3 160 262 372 469 6.97e-18 84.0
Msa0625800 MtrunA17_Chr7g0243891 50.820 61 28 2 162 222 216 274 5.81e-14 72.4
Msa0625800 MtrunA17_Chr1g0184691 53.125 64 30 0 160 223 291 354 9.19e-18 82.8
Msa0625800 MtrunA17_Chr5g0418191 52.381 63 29 1 160 222 318 379 1.48e-17 82.8
Msa0625800 MtrunA17_Chr5g0418191 53.333 60 26 2 163 222 152 209 5.08e-14 72.4
Msa0625800 MtrunA17_Chr7g0248721 41.379 116 56 5 112 220 87 197 3.04e-17 79.0
Msa0625800 MtrunA17_Chr7g0224801 52.459 61 28 1 160 220 91 150 3.11e-17 77.8
Msa0625800 MtrunA17_Chr1g0188941 49.206 63 31 1 160 222 49 110 3.14e-17 76.3
Msa0625800 MtrunA17_Chr7g0270051 47.761 67 35 0 163 229 54 120 4.62e-17 79.3
Msa0625800 MtrunA17_Chr3g0079691 53.968 63 28 1 160 222 493 554 5.07e-17 81.6
Msa0625800 MtrunA17_Chr3g0079691 48.571 70 34 2 154 223 272 339 1.02e-14 74.7
Msa0625800 MtrunA17_Chr4g0042831 52.381 63 29 1 160 222 276 337 5.92e-17 80.9
Msa0625800 MtrunA17_Chr4g0042831 50.000 60 29 1 163 222 146 204 4.87e-12 66.2
Msa0625800 MtrunA17_Chr4g0074001 32.203 177 97 5 92 252 288 457 7.01e-17 80.9
Msa0625800 MtrunA17_Chr5g0443131 49.231 65 32 1 161 225 156 219 7.86e-17 79.7
Msa0625800 MtrunA17_Chr4g0004911 52.381 63 29 1 160 222 334 395 8.78e-17 80.5
Msa0625800 MtrunA17_Chr4g0004911 35.593 118 70 3 162 275 184 299 1.12e-15 77.4
Msa0625800 MtrunA17_Chr4g0024391 32.381 105 67 1 139 239 206 310 1.61e-16 79.7
Msa0625800 MtrunA17_Chr7g0218081 53.333 60 27 1 160 219 408 466 1.63e-16 80.1
Msa0625800 MtrunA17_Chr7g0218081 51.613 62 26 3 163 222 229 288 6.89e-13 68.9
Msa0625800 MtrunA17_Chr8g0348311 46.479 71 38 0 163 233 156 226 2.63e-16 78.6
Msa0625800 MtrunA17_Chr8g0387501 44.444 81 41 1 163 239 130 210 3.27e-16 77.4
Msa0625800 MtrunA17_Chr8g0386241 47.541 61 31 1 160 220 101 160 4.67e-16 75.1
Msa0625800 MtrunA17_Chr7g0249311 52.381 63 29 1 160 222 390 451 6.42e-16 78.2
Msa0625800 MtrunA17_Chr7g0249311 49.180 61 29 2 162 222 179 237 1.22e-11 65.5
Msa0625800 MtrunA17_Chr8g0379461 50.000 60 30 0 163 222 77 136 7.13e-16 75.9
Msa0625800 MtrunA17_Chr7g0249301 50.794 63 30 1 160 222 290 351 8.39e-16 77.4
Msa0625800 MtrunA17_Chr7g0249301 46.774 62 31 2 161 222 61 120 3.03e-11 63.5
Msa0625800 MtrunA17_Chr2g0289181 35.556 135 75 4 162 288 14 144 1.16e-15 75.1
Msa0625800 MtrunA17_Chr3g0129321 50.794 63 30 1 160 222 116 177 1.55e-15 73.9
Msa0625800 MtrunA17_Chr4g0068541 48.387 62 31 1 161 222 207 267 1.66e-15 76.6
Msa0625800 MtrunA17_Chr8g0383251 50.794 63 30 1 160 222 106 167 1.75e-15 73.6
Msa0625800 MtrunA17_Chr3g0139021 46.269 67 36 0 160 226 312 378 2.08e-15 76.3
Msa0625800 MtrunA17_Chr7g0248691 33.333 120 78 1 160 277 152 271 2.15e-15 75.5
Msa0625800 MtrunA17_Chr5g0418781 49.153 59 29 1 161 219 123 180 2.19e-15 75.1
Msa0625800 MtrunA17_Chr2g0284321 45.902 61 33 0 163 223 36 96 3.54e-15 73.2
Msa0625800 MtrunA17_Chr7g0228941 46.667 60 32 0 160 219 50 109 4.76e-15 70.5
Msa0625800 MtrunA17_Chr8g0383351 43.836 73 39 2 147 219 146 216 5.07e-15 73.2
Msa0625800 MtrunA17_Chr8g0335811 50.000 60 29 1 160 219 152 210 5.59e-15 72.8
Msa0625800 MtrunA17_Chr3g0129361 48.333 60 30 1 160 219 142 200 7.92e-15 72.4
Msa0625800 MtrunA17_Chr7g0238921 50.820 61 29 1 163 223 125 184 1.95e-14 72.8
Msa0625800 MtrunA17_Chr1g0202461 43.056 72 41 0 163 234 262 333 2.33e-14 73.2
Msa0625800 MtrunA17_Chr2g0319961 48.333 60 31 0 163 222 81 140 1.25e-13 69.7
Msa0625800 MtrunA17_Chr5g0432071 45.000 60 31 2 163 222 105 162 1.34e-12 65.9
Msa0625800 MtrunA17_Chr5g0419241 42.593 54 31 0 137 190 52 105 3.10e-12 62.4
Msa0625800 MtrunA17_Chr5g0447711 36.264 91 49 3 149 239 217 298 3.53e-12 66.2
Msa0625800 MtrunA17_Chr1g0189391 43.662 71 36 3 150 219 87 154 4.53e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0625800 AT1G80840.1 51.724 319 120 7 4 314 6 298 1.93e-96 287
Msa0625800 AT4G31800.1 45.260 327 141 5 1 311 1 305 7.60e-80 245
Msa0625800 AT2G25000.1 41.748 309 131 7 12 314 4 269 4.20e-64 204
Msa0625800 AT4G31800.2 44.615 260 108 4 68 311 1 240 4.15e-62 197
Msa0625800 AT2G25000.2 43.657 268 104 6 51 314 2 226 4.76e-60 192
Msa0625800 AT2G25000.4 43.657 268 104 6 51 314 2 226 4.76e-60 192
Msa0625800 AT2G25000.3 43.820 267 103 6 51 313 24 247 2.83e-59 191
Msa0625800 AT4G31800.3 48.837 215 92 3 1 199 1 213 9.06e-57 184
Msa0625800 AT1G62300.1 30.686 277 126 7 50 260 159 435 2.06e-32 126
Msa0625800 AT4G01720.1 31.683 202 112 3 48 223 99 300 7.93e-28 113
Msa0625800 AT4G04450.2 37.500 160 74 4 129 262 165 324 1.86e-27 111
Msa0625800 AT4G04450.1 37.500 160 74 4 129 262 259 418 4.63e-27 111
Msa0625800 AT4G22070.4 51.220 82 40 0 142 223 277 358 8.30e-27 110
Msa0625800 AT4G22070.3 51.220 82 40 0 142 223 277 358 8.30e-27 110
Msa0625800 AT4G22070.2 51.220 82 40 0 142 223 277 358 8.30e-27 110
Msa0625800 AT4G22070.1 51.220 82 40 0 142 223 277 358 8.30e-27 110
Msa0625800 AT1G68150.1 53.571 84 32 2 140 222 218 295 2.66e-25 104
Msa0625800 AT1G18860.1 61.290 62 24 0 161 222 238 299 3.58e-24 102
Msa0625800 AT5G15130.2 52.564 78 37 0 145 222 168 245 4.69e-24 102
Msa0625800 AT5G15130.1 52.564 78 37 0 145 222 210 287 5.06e-24 102
Msa0625800 AT5G07100.2 36.806 144 83 5 79 222 65 200 1.82e-21 90.9
Msa0625800 AT5G07100.2 38.053 113 60 3 163 274 25 128 5.52e-16 75.9
Msa0625800 AT5G07100.4 36.806 144 83 5 79 222 65 200 1.82e-21 90.9
Msa0625800 AT5G07100.4 38.053 113 60 3 163 274 25 128 5.52e-16 75.9
Msa0625800 AT5G07100.5 36.806 144 83 5 79 222 65 200 1.82e-21 90.9
Msa0625800 AT5G07100.5 38.053 113 60 3 163 274 25 128 5.52e-16 75.9
Msa0625800 AT5G07100.3 36.806 144 83 5 79 222 65 200 1.82e-21 90.9
Msa0625800 AT5G07100.3 38.053 113 60 3 163 274 25 128 5.52e-16 75.9
Msa0625800 AT5G07100.1 36.806 144 83 5 79 222 158 293 3.07e-21 92.4
Msa0625800 AT5G07100.1 38.053 113 60 3 163 274 118 221 3.79e-15 75.1
Msa0625800 AT2G04880.2 50.617 81 31 2 160 240 281 352 4.99e-21 93.6
Msa0625800 AT2G04880.2 44.444 63 33 2 160 222 109 169 4.63e-13 69.7
Msa0625800 AT2G04880.1 50.617 81 31 2 160 240 305 376 5.27e-21 93.6
Msa0625800 AT2G04880.1 44.444 63 33 2 160 222 109 169 4.78e-13 69.7
Msa0625800 AT5G13080.1 43.269 104 56 2 117 220 24 124 7.50e-20 84.7
Msa0625800 AT4G31550.1 40.351 114 64 2 119 232 207 316 8.03e-20 88.6
Msa0625800 AT1G69810.1 27.273 264 123 7 26 222 3 264 1.10e-19 89.0
Msa0625800 AT2G30590.1 39.091 110 63 2 114 223 269 374 1.97e-19 88.2
Msa0625800 AT1G29860.1 44.828 87 38 2 161 238 135 220 2.34e-19 86.7
Msa0625800 AT4G31550.2 52.055 73 35 0 160 232 243 315 3.21e-19 87.0
Msa0625800 AT2G38470.1 45.652 92 45 2 160 251 360 446 4.03e-19 88.2
Msa0625800 AT2G38470.1 54.098 61 26 2 162 222 184 242 6.20e-16 78.6
Msa0625800 AT1G69810.2 44.828 87 45 2 137 222 122 206 5.18e-19 86.3
Msa0625800 AT2G23320.1 57.895 57 24 0 163 219 241 297 6.82e-19 85.9
Msa0625800 AT2G24570.1 41.748 103 56 2 119 221 204 302 1.04e-18 85.5
Msa0625800 AT1G55600.1 59.016 61 24 1 163 223 308 367 1.54e-18 86.3
Msa0625800 AT5G26170.1 53.333 60 27 1 160 219 111 169 2.42e-18 81.3
Msa0625800 AT5G56270.1 55.556 63 27 1 160 222 485 546 3.50e-18 85.5
Msa0625800 AT5G56270.1 27.542 236 147 5 43 272 161 378 1.18e-14 75.1
Msa0625800 AT3G04670.1 41.584 101 55 2 119 219 223 319 3.88e-18 84.0
Msa0625800 AT5G49520.1 53.226 62 28 1 161 222 220 280 3.99e-18 84.7
Msa0625800 AT4G18170.1 51.613 62 29 1 161 222 171 231 5.09e-18 83.6
Msa0625800 AT3G62340.1 50.685 73 35 1 159 231 115 186 5.37e-18 82.8
Msa0625800 AT4G26640.5 55.556 63 27 1 160 222 203 264 5.68e-18 84.0
Msa0625800 AT4G26640.5 41.250 80 45 2 152 231 25 102 1.32e-12 68.2
Msa0625800 AT4G26640.6 55.556 63 27 1 160 222 203 264 5.68e-18 84.0
Msa0625800 AT4G26640.6 41.250 80 45 2 152 231 25 102 1.32e-12 68.2
Msa0625800 AT4G26640.4 55.556 63 27 1 160 222 203 264 5.68e-18 84.0
Msa0625800 AT4G26640.4 41.250 80 45 2 152 231 25 102 1.32e-12 68.2
Msa0625800 AT4G26640.3 55.556 63 27 1 160 222 203 264 5.68e-18 84.0
Msa0625800 AT4G26640.3 41.250 80 45 2 152 231 25 102 1.32e-12 68.2
Msa0625800 AT4G24240.1 44.318 88 45 2 132 219 255 338 6.04e-18 83.6
Msa0625800 AT1G13960.2 53.968 63 28 1 160 222 254 315 6.77e-18 83.6
Msa0625800 AT1G13960.2 56.452 62 24 3 163 224 77 135 1.35e-15 77.0
Msa0625800 AT1G13960.1 55.000 60 26 1 160 219 407 465 7.80e-18 84.3
Msa0625800 AT1G13960.1 56.452 62 24 3 163 224 230 288 1.33e-15 77.8
Msa0625800 AT5G28650.1 41.584 101 55 2 119 219 223 319 7.98e-18 83.2
Msa0625800 AT1G64000.1 39.796 98 54 3 132 229 88 180 8.18e-18 80.5
Msa0625800 AT4G26640.2 55.556 63 27 1 160 222 379 440 8.59e-18 84.3
Msa0625800 AT4G26640.2 41.250 80 45 2 152 231 201 278 1.93e-12 68.2
Msa0625800 AT4G26640.7 56.667 60 25 1 160 219 339 397 8.69e-18 84.0
Msa0625800 AT4G26640.7 43.662 71 38 2 152 222 161 229 2.12e-12 67.8
Msa0625800 AT4G26640.1 55.556 63 27 1 160 222 307 368 9.07e-18 84.0
Msa0625800 AT4G26640.1 41.250 80 45 2 152 231 129 206 2.02e-12 67.8
Msa0625800 AT1G29280.1 51.667 60 29 0 163 222 75 134 9.26e-18 81.6
Msa0625800 AT5G41570.1 46.753 77 38 2 144 220 82 155 9.45e-18 80.1
Msa0625800 AT2G03340.1 53.968 63 28 1 160 222 413 474 1.14e-17 84.0
Msa0625800 AT2G03340.1 50.000 72 34 2 163 234 251 320 3.01e-15 76.6
Msa0625800 AT2G47260.1 54.839 62 27 1 161 222 173 233 2.32e-17 81.6
Msa0625800 AT5G46350.1 42.697 89 47 2 161 246 182 269 2.46e-17 81.6
Msa0625800 AT2G30250.1 43.750 96 45 4 133 222 295 387 3.22e-17 82.0
Msa0625800 AT2G30250.1 48.333 60 29 2 163 222 167 224 6.17e-12 66.2
Msa0625800 AT2G37260.2 45.977 87 44 3 136 222 58 141 5.12e-17 80.9
Msa0625800 AT2G37260.2 35.135 111 58 3 116 219 220 323 5.25e-15 75.1
Msa0625800 AT2G37260.3 45.977 87 44 3 136 222 60 143 5.15e-17 80.9
Msa0625800 AT2G37260.3 35.135 111 58 3 116 219 222 325 5.27e-15 75.1
Msa0625800 AT3G01080.2 52.381 63 29 1 160 222 342 403 5.17e-17 81.6
Msa0625800 AT3G01080.2 51.667 60 27 2 163 222 206 263 1.73e-12 68.2
Msa0625800 AT3G01080.1 52.381 63 29 1 160 222 304 365 5.51e-17 81.3
Msa0625800 AT3G01080.1 51.667 60 27 2 163 222 168 225 1.83e-12 67.8
Msa0625800 AT2G37260.1 45.977 87 44 3 136 222 140 223 6.44e-17 81.3
Msa0625800 AT2G37260.1 35.135 111 58 3 116 219 302 405 5.83e-15 75.5
Msa0625800 AT3G01970.1 53.333 60 27 1 160 219 63 121 8.93e-17 76.3
Msa0625800 AT1G69310.4 52.542 59 27 1 161 219 146 203 1.19e-16 79.0
Msa0625800 AT1G69310.2 52.542 59 27 1 161 219 146 203 1.19e-16 79.0
Msa0625800 AT1G69310.1 52.542 59 27 1 161 219 146 203 1.19e-16 79.0
Msa0625800 AT4G30935.1 45.946 74 38 2 149 222 319 390 1.52e-16 80.5
Msa0625800 AT2G21900.1 49.254 67 33 1 156 222 103 168 1.65e-16 77.0
Msa0625800 AT2G34830.1 35.115 131 75 2 109 230 154 283 1.71e-16 80.1
Msa0625800 AT2G34830.2 35.115 131 75 2 109 230 163 292 1.82e-16 80.1
Msa0625800 AT4G01250.1 45.070 71 39 0 163 233 129 199 4.50e-16 77.8
Msa0625800 AT1G30650.1 45.833 72 39 0 159 230 214 285 6.86e-16 78.2
Msa0625800 AT5G64810.1 37.000 100 60 2 120 219 70 166 1.21e-15 74.3
Msa0625800 AT5G52830.1 37.963 108 64 1 163 267 166 273 1.37e-15 76.6
Msa0625800 AT5G43290.1 41.176 85 48 2 135 219 88 170 1.58e-15 75.9
Msa0625800 AT2G44745.1 48.571 70 33 2 160 229 143 209 2.01e-15 74.3
Msa0625800 AT4G26440.1 52.381 63 29 1 160 222 370 431 2.49e-15 77.0
Msa0625800 AT4G26440.1 47.541 61 30 2 163 223 179 237 2.39e-12 67.8
Msa0625800 AT2G46130.1 50.820 61 29 1 160 220 28 87 4.11e-15 70.9
Msa0625800 AT3G58710.2 46.154 78 38 1 163 240 71 144 6.22e-15 73.9
Msa0625800 AT3G58710.1 46.154 78 38 1 163 240 72 145 6.30e-15 73.9
Msa0625800 AT4G39410.1 50.000 60 29 1 160 219 221 279 6.94e-15 74.3
Msa0625800 AT5G45050.4 30.405 148 89 3 83 230 976 1109 1.44e-14 75.1
Msa0625800 AT5G45050.1 30.405 148 89 3 83 230 1115 1248 1.44e-14 75.1
Msa0625800 AT5G45050.2 30.405 148 89 3 83 230 1087 1220 1.49e-14 75.1
Msa0625800 AT5G45260.1 35.833 120 70 3 121 238 1172 1286 9.48e-14 72.4
Msa0625800 AT4G23550.1 38.667 75 46 0 160 234 138 212 4.19e-13 69.3
Msa0625800 AT1G69310.3 50.847 59 24 2 161 219 146 199 9.34e-13 67.8
Msa0625800 AT3G01080.3 51.667 60 27 2 163 222 206 263 1.30e-12 67.8
Msa0625800 AT3G32090.1 46.753 77 34 2 180 249 76 152 3.15e-12 64.7
Msa0625800 AT4G12020.10 38.824 85 50 2 161 245 467 549 1.06e-11 66.2
Msa0625800 AT4G12020.3 38.824 85 50 2 161 245 467 549 1.11e-11 66.2
Msa0625800 AT4G12020.6 38.824 85 50 2 161 245 467 549 1.12e-11 66.2
Msa0625800 AT4G12020.8 38.824 85 50 2 161 245 467 549 1.12e-11 66.2
Msa0625800 AT4G12020.5 38.824 85 50 2 161 245 400 482 1.17e-11 66.2
Msa0625800 AT4G12020.7 38.824 85 50 2 161 245 467 549 1.18e-11 66.2
Msa0625800 AT4G12020.4 38.824 85 50 2 161 245 467 549 1.21e-11 66.2
Msa0625800 AT4G12020.1 38.824 85 50 2 161 245 467 549 1.24e-11 66.2
Msa0625800 AT4G12020.9 38.824 85 50 2 161 245 467 549 1.24e-11 66.2
Msa0625800 AT4G12020.2 38.824 85 50 2 161 245 467 549 1.24e-11 66.2
Msa0625800 AT4G12020.11 38.824 85 50 2 161 245 467 549 1.87e-11 65.5
Msa0625800 AT2G46130.2 49.180 61 26 2 160 220 28 83 3.16e-11 59.7

Find 75 sgRNAs with CRISPR-Local

Find 143 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACATAAGCTCTTGAAATTT+TGG 0.096984 4_3:-5156855 None:intergenic
ACAAGTGCTGCTCTAAAATT+TGG 0.202946 4_3:-5157896 None:intergenic
ACCTAAGGTACCAAAGAATT+TGG 0.225108 4_3:+5157841 Msa0625800:CDS
ATTAAGTATATTCCATAAAA+TGG 0.230295 4_3:+5157997 Msa0625800:three_prime_UTR
TGCAGCCATTTCAGGAAAAT+TGG 0.259692 4_3:+5157919 Msa0625800:CDS
GCACTTGTTGCAGCCATTTC+AGG 0.268706 4_3:+5157911 Msa0625800:CDS
GGATATCATTGGAGGAAATA+TGG 0.293100 4_3:+5157176 Msa0625800:CDS
ATTTGTTCCACCAAATTCTT+TGG 0.303785 4_3:-5157851 None:intergenic
CACTTTGAGAAGTCATTTGA+TGG 0.316280 4_3:+5156658 Msa0625800:CDS
ATTTCAGTCCATCGATGAAT+TGG 0.333220 4_3:+5156559 Msa0625800:intron
AACCTTAGAAAACAAGAAAT+TGG 0.335631 4_3:+5156601 Msa0625800:CDS
AATAACAATAGTAATTTGAT+TGG 0.348469 4_3:+5156752 Msa0625800:CDS
AACTTCTTCATGAGCTCTAT+AGG 0.350958 4_3:-5155794 None:intergenic
CCACAGTTCGGTACCTTGTT+CGG 0.368882 4_3:+5157718 Msa0625800:CDS
GATGTGCTTACTTCTTTCTC+AGG 0.378143 4_3:-5156698 None:intergenic
GAGTCAAGTGTAACCACTTT+TGG 0.384251 4_3:-5157764 None:intergenic
AAATTTCAAGAGCTTATGTT+AGG 0.384990 4_3:+5156858 Msa0625800:CDS
ACCAAATTCTTTGGTACCTT+AGG 0.394330 4_3:-5157842 None:intergenic
TTGAGGTATCCTAGATACTT+TGG 0.405054 4_3:-5158104 None:intergenic
ACTTCTTCATGAGCTCTATA+GGG 0.416190 4_3:-5155793 None:intergenic
AAAGAATTTGGTGGAACAAA+TGG 0.417985 4_3:+5157853 Msa0625800:CDS
ATCATATATCAACACTTCCT+TGG 0.423806 4_3:+5155756 Msa0625800:CDS
ATTGAGTCAACATCAGGTTC+TGG 0.432635 4_3:+5157683 Msa0625800:CDS
AAGATAAGAGAAGTGGCTTA+AGG 0.436349 4_3:-5155632 None:intergenic
ATGCTTGTTGCTACTTATGA+AGG 0.438838 4_3:+5157632 Msa0625800:CDS
AGGACTGAAGCTTCTGATAC+AGG 0.439171 4_3:+5156878 Msa0625800:CDS
CCTGATGTTGACTCAATTTG+AGG 0.440623 4_3:-5157677 None:intergenic
GAGCATTTGAAATAAGCTCT+TGG 0.448164 4_3:-5157227 None:intergenic
ACAATTTGGAATCTGATTTG+AGG 0.471517 4_3:-5158121 None:intergenic
TAAGCACATCATCAAAGAAA+AGG 0.475073 4_3:+5156711 Msa0625800:CDS
ATTGGTGCACAATAATTAAG+AGG 0.485605 4_3:+5157937 Msa0625800:exon
GACTCAATTTGAGGAGGTTG+AGG 0.489379 4_3:-5157668 None:intergenic
CTCATCTTTCACAGCAAAGT+TGG 0.495364 4_3:-5155992 None:intergenic
GAAGAAGGAAAGTGAGTGGA+AGG 0.502244 4_3:-5155517 None:intergenic
TTGAAATAAGCTCTTGGACA+AGG 0.504759 4_3:-5157221 None:intergenic
CCTCAAATTGAGTCAACATC+AGG 0.509933 4_3:+5157677 Msa0625800:CDS
TTGGATTTATTTGGTAAACA+TGG 0.518013 4_3:+5155726 Msa0625800:exon
AATTTGATTGGAATTAACAA+TGG 0.518843 4_3:+5156764 Msa0625800:CDS
TGTTTATTTATAGAAGAAAG+AGG 0.523025 4_3:+5155939 Msa0625800:intron
TTGTGAAGGATGGATATCAT+TGG 0.540562 4_3:+5157165 Msa0625800:CDS
CCGAACTGTGGTTCACGCTA+CGG 0.542637 4_3:-5157706 None:intergenic
AATTGGAGGAGGAATTGAGA+AGG 0.543648 4_3:+5156576 Msa0625800:CDS
TGAAATAAGCTCTTGGACAA+GGG 0.544753 4_3:-5157220 None:intergenic
AATATTAAAGATAAGAGAAG+TGG 0.546755 4_3:-5155639 None:intergenic
TCAGTCCATCGATGAATTGG+AGG 0.547121 4_3:+5156562 Msa0625800:intron
GGGAATAATGTTGAGATCCA+AGG 0.551140 4_3:-5155773 None:intergenic
TAAGGTACCAAAGAATTTGG+TGG 0.555336 4_3:+5157844 Msa0625800:CDS
CTCACCAGCAGCACCAAAAG+TGG 0.557520 4_3:+5157751 Msa0625800:CDS
TGAGAAACTCAAGTTGAAGA+AGG 0.558196 4_3:-5155532 None:intergenic
TTCCTCCTCCAATTCATCGA+TGG 0.559559 4_3:-5156567 None:intergenic
CTTAGAAAACAAGAAATTGG+TGG 0.564034 4_3:+5156604 Msa0625800:CDS
ATTGGAGGAGGAATTGAGAA+GGG 0.565937 4_3:+5156577 Msa0625800:CDS
TGAATTAATAAATAAGCAAG+TGG 0.570016 4_3:+5155465 Msa0625800:five_prime_UTR
TGCTTGTTGCTACTTATGAA+GGG 0.570383 4_3:+5157633 Msa0625800:CDS
CCGTAGCGTGAACCACAGTT+CGG 0.575774 4_3:+5157706 Msa0625800:CDS
GTCCATCGATGAATTGGAGG+AGG 0.577129 4_3:+5156565 Msa0625800:intron
TGAAGGATGGATATCATTGG+AGG 0.578215 4_3:+5157168 Msa0625800:CDS
TTTCTTACACGATTCTTCAT+CGG 0.585904 4_3:-5156807 None:intergenic
AAGAATCGTGTAAGAAACCA+AGG 0.593473 4_3:+5156813 Msa0625800:CDS
GAGGTGAGTGACGCCGAACA+AGG 0.597975 4_3:-5157731 None:intergenic
TTCATAAGTAGCAACAAGCA+TGG 0.599378 4_3:-5157630 None:intergenic
GCTTGTTGCTACTTATGAAG+GGG 0.612450 4_3:+5157634 Msa0625800:CDS
GGAAGGAGACACATGACATG+TGG 0.613013 4_3:-5155500 None:intergenic
AGTTGAAGAAGGAAAGTGAG+TGG 0.615014 4_3:-5155521 None:intergenic
AGCAAAGTTGGTCATCCCCA+AGG 0.617875 4_3:-5155980 None:intergenic
TTCATCGGTAGAGCTACTCT+CGG 0.622483 4_3:-5156792 None:intergenic
GAATTAATAAATAAGCAAGT+GGG 0.623957 4_3:+5155466 Msa0625800:five_prime_UTR
ACCAAGAAAAGATTCACCTA+AGG 0.630943 4_3:+5157826 Msa0625800:CDS
GAAGGAGACACATGACATGT+GGG 0.646136 4_3:-5155499 None:intergenic
TTATTTATAGAAGAAAGAGG+TGG 0.649581 4_3:+5155942 Msa0625800:intron
GATGTTGACTCAATTTGAGG+AGG 0.679037 4_3:-5157674 None:intergenic
CCGAACAAGGTACCGAACTG+TGG 0.683983 4_3:-5157718 None:intergenic
CAACTTTGCTGTGAAAGATG+AGG 0.688649 4_3:+5155993 Msa0625800:CDS
ATTGGTGGAAATGCTCTCAG+TGG 0.691318 4_3:+5156619 Msa0625800:CDS
AGAATCGTGTAAGAAACCAA+GGG 0.696308 4_3:+5156814 Msa0625800:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGATTATTTATTTATTC+AGG + chr4_3:5157583-5157602 Msa0625800:intron 10.0%
!!! ACAATATTTTTGGATTTATT+TGG + chr4_3:5155717-5155736 Msa0625800:five_prime_UTR 15.0%
!!! ATATCAATTTTTATACTTAC+AGG - chr4_3:5155820-5155839 None:intergenic 15.0%
!! ATCATCAATTATTAATTCAA+GGG - chr4_3:5156407-5156426 None:intergenic 15.0%
!! AATCATCAATTATTAATTCA+AGG - chr4_3:5156408-5156427 None:intergenic 15.0%
!! AATAACAATAGTAATTTGAT+TGG + chr4_3:5156752-5156771 Msa0625800:CDS 15.0%
!! ATTAAGTATATTCCATAAAA+TGG + chr4_3:5157997-5158016 Msa0625800:three_prime_UTR 15.0%
!! TGAATTAATAAATAAGCAAG+TGG + chr4_3:5155465-5155484 Msa0625800:five_prime_UTR 20.0%
!! GAATTAATAAATAAGCAAGT+GGG + chr4_3:5155466-5155485 Msa0625800:five_prime_UTR 20.0%
!! AATATTAAAGATAAGAGAAG+TGG - chr4_3:5155642-5155661 None:intergenic 20.0%
!! AAATCCAAAAATATTGTTCA+AGG - chr4_3:5155714-5155733 None:intergenic 20.0%
!! TGTTTATTTATAGAAGAAAG+AGG + chr4_3:5155939-5155958 Msa0625800:intron 20.0%
!! AATAGAGAAATATACATAAG+TGG - chr4_3:5156091-5156110 None:intergenic 20.0%
!! TAAACAAGTTATAGCTTATA+TGG - chr4_3:5156265-5156284 None:intergenic 20.0%
!! AATTTGATTGGAATTAACAA+TGG + chr4_3:5156764-5156783 Msa0625800:CDS 20.0%
!!! ATTGTTTTTTGTTTTCAGTT+CGG - chr4_3:5157028-5157047 None:intergenic 20.0%
!!! AAATTTGTTAAAGTCATGTT+TGG - chr4_3:5157336-5157355 None:intergenic 20.0%
!!! AAAGAAATTGATCCATTTTA+TGG - chr4_3:5158012-5158031 None:intergenic 20.0%
!!! TTTATCAATTTGACCATTTT+TGG + chr4_3:5158079-5158098 Msa0625800:three_prime_UTR 20.0%
!!! TTATCAATTTGACCATTTTT+GGG + chr4_3:5158080-5158099 Msa0625800:three_prime_UTR 20.0%
!!! GAATTTTTGCAATAACAATT+TGG - chr4_3:5158138-5158157 None:intergenic 20.0%
!! TTGACCTTGAACAATATTTT+TGG + chr4_3:5155707-5155726 Msa0625800:five_prime_UTR 25.0%
! TTGGATTTATTTGGTAAACA+TGG + chr4_3:5155726-5155745 Msa0625800:exon 25.0%
! TTATTTATAGAAGAAAGAGG+TGG + chr4_3:5155942-5155961 Msa0625800:intron 25.0%
! ATAGTGCATATTTCAACAAT+TGG - chr4_3:5156178-5156197 None:intergenic 25.0%
!! TTTGATACCATTAGTTTGAA+TGG + chr4_3:5156450-5156469 Msa0625800:intron 25.0%
! ATAATCACCATTCAAACTAA+TGG - chr4_3:5156460-5156479 None:intergenic 25.0%
!!! TTTTGTTTATCAGTCCATTA+TGG + chr4_3:5156479-5156498 Msa0625800:intron 25.0%
!!! TTAAGAGTTTTTAGCCAAAA+GGG - chr4_3:5156510-5156529 None:intergenic 25.0%
!!! TTTAAGAGTTTTTAGCCAAA+AGG - chr4_3:5156511-5156530 None:intergenic 25.0%
! AACCTTAGAAAACAAGAAAT+TGG + chr4_3:5156601-5156620 Msa0625800:CDS 25.0%
!! TTAATATTTTCTTCTTCCCT+TGG - chr4_3:5156833-5156852 None:intergenic 25.0%
!! AACATAAGCTCTTGAAATTT+TGG - chr4_3:5156858-5156877 None:intergenic 25.0%
! AAATTTCAAGAGCTTATGTT+AGG + chr4_3:5156858-5156877 Msa0625800:CDS 25.0%
! TGTAAGTTAAGTATCTTACA+AGG - chr4_3:5156904-5156923 None:intergenic 25.0%
! CTGAAAACAAAAAACAATGT+TGG + chr4_3:5157030-5157049 Msa0625800:intron 25.0%
!!! TGTTTTAAAAACCGAACAAA+CGG - chr4_3:5157077-5157096 None:intergenic 25.0%
! AGCATTTGATAAACGTAATT+TGG - chr4_3:5157530-5157549 None:intergenic 25.0%
!! TTTTCTTGGTTCAATATTCT+TGG - chr4_3:5157816-5157835 None:intergenic 25.0%
!!! TCAATTTCTTTTAGAGCAAT+AGG + chr4_3:5158021-5158040 Msa0625800:three_prime_UTR 25.0%
!!! TATCAATTTGACCATTTTTG+GGG + chr4_3:5158081-5158100 Msa0625800:three_prime_UTR 25.0%
!! TTGTTATTGCAAAAATTCCA+TGG + chr4_3:5158140-5158159 Msa0625800:three_prime_UTR 25.0%
ATCATATATCAACACTTCCT+TGG + chr4_3:5155756-5155775 Msa0625800:CDS 30.0%
TTGTTGAATTATGCCATGTT+TGG + chr4_3:5156033-5156052 Msa0625800:intron 30.0%
CTTGTTTACATAAGCTATCT+TGG + chr4_3:5156277-5156296 Msa0625800:intron 30.0%
GTCAGTAGATAAACTCAAAT+AGG + chr4_3:5156367-5156386 Msa0625800:intron 30.0%
!!! CACCAATTTCTTGTTTTCTA+AGG - chr4_3:5156606-5156625 None:intergenic 30.0%
CTTAGAAAACAAGAAATTGG+TGG + chr4_3:5156604-5156623 Msa0625800:CDS 30.0%
TAAGCACATCATCAAAGAAA+AGG + chr4_3:5156711-5156730 Msa0625800:CDS 30.0%
TTTCTTACACGATTCTTCAT+CGG - chr4_3:5156810-5156829 None:intergenic 30.0%
!! ATCGCTTTTGCGTATATTTA+GGG - chr4_3:5156937-5156956 None:intergenic 30.0%
!!! CGATGTTTTAAAAACCAAAC+TGG + chr4_3:5156953-5156972 Msa0625800:intron 30.0%
!! CAAAAAACAATGTTGGTTCA+CGG + chr4_3:5157037-5157056 Msa0625800:intron 30.0%
ATTTGTTCCACCAAATTCTT+TGG - chr4_3:5157854-5157873 None:intergenic 30.0%
! AAAGAATTTGGTGGAACAAA+TGG + chr4_3:5157853-5157872 Msa0625800:CDS 30.0%
ATTGGTGCACAATAATTAAG+AGG + chr4_3:5157937-5157956 Msa0625800:exon 30.0%
! ACAATTTGGAATCTGATTTG+AGG - chr4_3:5158124-5158143 None:intergenic 30.0%
!! GAGAAATTCTTTTTCATCCA+TGG - chr4_3:5158160-5158179 None:intergenic 30.0%
!! TGAGAAACTCAAGTTGAAGA+AGG - chr4_3:5155535-5155554 None:intergenic 35.0%
AAGATAAGAGAAGTGGCTTA+AGG - chr4_3:5155635-5155654 None:intergenic 35.0%
ACTTCTTCATGAGCTCTATA+GGG - chr4_3:5155796-5155815 None:intergenic 35.0%
AACTTCTTCATGAGCTCTAT+AGG - chr4_3:5155797-5155816 None:intergenic 35.0%
!! GAAAGCAACTTTTTCTCCTT+GGG + chr4_3:5155964-5155983 Msa0625800:CDS 35.0%
!! AAAGCAACTTTTTCTCCTTG+GGG + chr4_3:5155965-5155984 Msa0625800:CDS 35.0%
TTAAGCTGTCTATCCAAACA+TGG - chr4_3:5156049-5156068 None:intergenic 35.0%
ATTTCAGTCCATCGATGAAT+TGG + chr4_3:5156559-5156578 Msa0625800:intron 35.0%
! CACTTTGAGAAGTCATTTGA+TGG + chr4_3:5156658-5156677 Msa0625800:CDS 35.0%
AAGAATCGTGTAAGAAACCA+AGG + chr4_3:5156813-5156832 Msa0625800:CDS 35.0%
AGAATCGTGTAAGAAACCAA+GGG + chr4_3:5156814-5156833 Msa0625800:CDS 35.0%
!! TCGCTTTTGCGTATATTTAG+GGG - chr4_3:5156936-5156955 None:intergenic 35.0%
!! CATCGCTTTTGCGTATATTT+AGG - chr4_3:5156938-5156957 None:intergenic 35.0%
! TCTGTGTTTTCAGATTGTGA+AGG + chr4_3:5157151-5157170 Msa0625800:intron 35.0%
! TGTTTTCAGATTGTGAAGGA+TGG + chr4_3:5157155-5157174 Msa0625800:intron 35.0%
TTGTGAAGGATGGATATCAT+TGG + chr4_3:5157165-5157184 Msa0625800:CDS 35.0%
GGATATCATTGGAGGAAATA+TGG + chr4_3:5157176-5157195 Msa0625800:CDS 35.0%
TGAAATAAGCTCTTGGACAA+GGG - chr4_3:5157223-5157242 None:intergenic 35.0%
TTGAAATAAGCTCTTGGACA+AGG - chr4_3:5157224-5157243 None:intergenic 35.0%
! GAGCATTTGAAATAAGCTCT+TGG - chr4_3:5157230-5157249 None:intergenic 35.0%
! GCTTTACCTTCTTTTTGACA+GGG - chr4_3:5157268-5157287 None:intergenic 35.0%
! AGCTTTACCTTCTTTTTGAC+AGG - chr4_3:5157269-5157288 None:intergenic 35.0%
TTCATAAGTAGCAACAAGCA+TGG - chr4_3:5157633-5157652 None:intergenic 35.0%
! ATGCTTGTTGCTACTTATGA+AGG + chr4_3:5157632-5157651 Msa0625800:CDS 35.0%
! TGCTTGTTGCTACTTATGAA+GGG + chr4_3:5157633-5157652 Msa0625800:CDS 35.0%
ACCAAGAAAAGATTCACCTA+AGG + chr4_3:5157826-5157845 Msa0625800:CDS 35.0%
! ACCTTAGGTGAATCTTTTCT+TGG - chr4_3:5157830-5157849 None:intergenic 35.0%
! ACCTAAGGTACCAAAGAATT+TGG + chr4_3:5157841-5157860 Msa0625800:CDS 35.0%
ACCAAATTCTTTGGTACCTT+AGG - chr4_3:5157845-5157864 None:intergenic 35.0%
! TAAGGTACCAAAGAATTTGG+TGG + chr4_3:5157844-5157863 Msa0625800:CDS 35.0%
!! ACAAGTGCTGCTCTAAAATT+TGG - chr4_3:5157899-5157918 None:intergenic 35.0%
! TTGAGGTATCCTAGATACTT+TGG - chr4_3:5158107-5158126 None:intergenic 35.0%
AGTTGAAGAAGGAAAGTGAG+TGG - chr4_3:5155524-5155543 None:intergenic 40.0%
GGGAATAATGTTGAGATCCA+AGG - chr4_3:5155776-5155795 None:intergenic 40.0%
!! GGAAAGCAACTTTTTCTCCT+TGG + chr4_3:5155963-5155982 Msa0625800:CDS 40.0%
CTCATCTTTCACAGCAAAGT+TGG - chr4_3:5155995-5156014 None:intergenic 40.0%
! CAACTTTGCTGTGAAAGATG+AGG + chr4_3:5155993-5156012 Msa0625800:CDS 40.0%
CCAAAAGGGTCATTCCATAA+TGG - chr4_3:5156496-5156515 None:intergenic 40.0%
! CCATTATGGAATGACCCTTT+TGG + chr4_3:5156493-5156512 Msa0625800:intron 40.0%
AATTGGAGGAGGAATTGAGA+AGG + chr4_3:5156576-5156595 Msa0625800:CDS 40.0%
ATTGGAGGAGGAATTGAGAA+GGG + chr4_3:5156577-5156596 Msa0625800:CDS 40.0%
GATGTGCTTACTTCTTTCTC+AGG - chr4_3:5156701-5156720 None:intergenic 40.0%
TAATGGTTCGATGTCCAGTT+TGG - chr4_3:5156970-5156989 None:intergenic 40.0%
TCGAACCATTAAAAACTCCC+AGG + chr4_3:5156979-5156998 Msa0625800:intron 40.0%
ACCATTAAAAACTCCCAGGA+TGG + chr4_3:5156983-5157002 Msa0625800:intron 40.0%
!!! GAACAGTTTTAAGCCATCCT+GGG - chr4_3:5156999-5157018 None:intergenic 40.0%
!!! TGAACAGTTTTAAGCCATCC+TGG - chr4_3:5157000-5157019 None:intergenic 40.0%
AACTGGTTGAACCGTTTGTT+CGG + chr4_3:5157063-5157082 Msa0625800:intron 40.0%
TGAAGGATGGATATCATTGG+AGG + chr4_3:5157168-5157187 Msa0625800:CDS 40.0%
GGTAAGACGTAAAAGCAAAC+AGG - chr4_3:5157315-5157334 None:intergenic 40.0%
AAATCTTCGTAGTGCACGTT+TGG - chr4_3:5157556-5157575 None:intergenic 40.0%
! GCTTGTTGCTACTTATGAAG+GGG + chr4_3:5157634-5157653 Msa0625800:CDS 40.0%
!! GATGTTGACTCAATTTGAGG+AGG - chr4_3:5157677-5157696 None:intergenic 40.0%
!! CCTGATGTTGACTCAATTTG+AGG - chr4_3:5157680-5157699 None:intergenic 40.0%
CCTCAAATTGAGTCAACATC+AGG + chr4_3:5157677-5157696 Msa0625800:CDS 40.0%
ATTGAGTCAACATCAGGTTC+TGG + chr4_3:5157683-5157702 Msa0625800:CDS 40.0%
! GAGTCAAGTGTAACCACTTT+TGG - chr4_3:5157767-5157786 None:intergenic 40.0%
TGCAGCCATTTCAGGAAAAT+TGG + chr4_3:5157919-5157938 Msa0625800:CDS 40.0%
! GTGCACCAATTTTCCTGAAA+TGG - chr4_3:5157927-5157946 None:intergenic 40.0%
AGATACTTTGGCCCCAAAAA+TGG - chr4_3:5158095-5158114 None:intergenic 40.0%
!!! TTTTTGGGGCCAAAGTATCT+AGG + chr4_3:5158095-5158114 Msa0625800:three_prime_UTR 40.0%
GAAGGAGACACATGACATGT+GGG - chr4_3:5155502-5155521 None:intergenic 45.0%
GAAGAAGGAAAGTGAGTGGA+AGG - chr4_3:5155520-5155539 None:intergenic 45.0%
TCAGTCCATCGATGAATTGG+AGG + chr4_3:5156562-5156581 Msa0625800:intron 45.0%
TTCCTCCTCCAATTCATCGA+TGG - chr4_3:5156570-5156589 None:intergenic 45.0%
ATTGGTGGAAATGCTCTCAG+TGG + chr4_3:5156619-5156638 Msa0625800:CDS 45.0%
TTCATCGGTAGAGCTACTCT+CGG - chr4_3:5156795-5156814 None:intergenic 45.0%
AGGACTGAAGCTTCTGATAC+AGG + chr4_3:5156878-5156897 Msa0625800:CDS 45.0%
! GCCATCCTGGGAGTTTTTAA+TGG - chr4_3:5156987-5157006 None:intergenic 45.0%
! TTCTTTTTGACAGGGCAGCT+TGG - chr4_3:5157260-5157279 None:intergenic 45.0%
AAGCTGCCCTGTCAAAAAGA+AGG + chr4_3:5157259-5157278 Msa0625800:CDS 45.0%
GACTCAATTTGAGGAGGTTG+AGG - chr4_3:5157671-5157690 None:intergenic 45.0%
GGAAGGAGACACATGACATG+TGG - chr4_3:5155503-5155522 None:intergenic 50.0%
! AGCAAAGTTGGTCATCCCCA+AGG - chr4_3:5155983-5156002 None:intergenic 50.0%
GTCCATCGATGAATTGGAGG+AGG + chr4_3:5156565-5156584 Msa0625800:intron 50.0%
!! ATGTTGGTTCACGGCTCAAC+TGG + chr4_3:5157046-5157065 Msa0625800:intron 50.0%
CCACAGTTCGGTACCTTGTT+CGG + chr4_3:5157718-5157737 Msa0625800:CDS 50.0%
!!! GTAACCACTTTTGGTGCTGC+TGG - chr4_3:5157758-5157777 None:intergenic 50.0%
! GCACTTGTTGCAGCCATTTC+AGG + chr4_3:5157911-5157930 Msa0625800:CDS 50.0%
CCGAACTGTGGTTCACGCTA+CGG - chr4_3:5157709-5157728 None:intergenic 55.0%
CCGTAGCGTGAACCACAGTT+CGG + chr4_3:5157706-5157725 Msa0625800:CDS 55.0%
!! CCGAACAAGGTACCGAACTG+TGG - chr4_3:5157721-5157740 None:intergenic 55.0%
!!! CACTTTTGGTGCTGCTGGTG+AGG - chr4_3:5157753-5157772 None:intergenic 55.0%
CTCACCAGCAGCACCAAAAG+TGG + chr4_3:5157751-5157770 Msa0625800:CDS 55.0%
GAGGTGAGTGACGCCGAACA+AGG - chr4_3:5157734-5157753 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 5155463 5158254 5155463 ID=Msa0625800;Name=Msa0625800
chr4_3 mRNA 5155463 5158254 5155463 ID=Msa0625800-mRNA-1;Parent=Msa0625800;Name=Msa0625800-mRNA-1;_AED=0.12;_eAED=0.12;_QI=282|1|1|1|1|1|5|299|314
chr4_3 exon 5155463 5155819 5155463 ID=Msa0625800-mRNA-1:exon:1415;Parent=Msa0625800-mRNA-1
chr4_3 exon 5155952 5156014 5155952 ID=Msa0625800-mRNA-1:exon:1416;Parent=Msa0625800-mRNA-1
chr4_3 exon 5156566 5156904 5156566 ID=Msa0625800-mRNA-1:exon:1417;Parent=Msa0625800-mRNA-1
chr4_3 exon 5157164 5157280 5157164 ID=Msa0625800-mRNA-1:exon:1418;Parent=Msa0625800-mRNA-1
chr4_3 exon 5157605 5158254 5157605 ID=Msa0625800-mRNA-1:exon:1419;Parent=Msa0625800-mRNA-1
chr4_3 five_prime_UTR 5155463 5155744 5155463 ID=Msa0625800-mRNA-1:five_prime_utr;Parent=Msa0625800-mRNA-1
chr4_3 CDS 5155745 5155819 5155745 ID=Msa0625800-mRNA-1:cds;Parent=Msa0625800-mRNA-1
chr4_3 CDS 5155952 5156014 5155952 ID=Msa0625800-mRNA-1:cds;Parent=Msa0625800-mRNA-1
chr4_3 CDS 5156566 5156904 5156566 ID=Msa0625800-mRNA-1:cds;Parent=Msa0625800-mRNA-1
chr4_3 CDS 5157164 5157280 5157164 ID=Msa0625800-mRNA-1:cds;Parent=Msa0625800-mRNA-1
chr4_3 CDS 5157605 5157955 5157605 ID=Msa0625800-mRNA-1:cds;Parent=Msa0625800-mRNA-1
chr4_3 three_prime_UTR 5157956 5158254 5157956 ID=Msa0625800-mRNA-1:three_prime_utr;Parent=Msa0625800-mRNA-1
Gene Sequence

>Msa0625800

ATGGATTGTTCATCATATATCAACACTTCCTTGGATCTCAACATTATTCCCTATAGAGCTCATGAAGAAGTTCCTAAGAAAGAGGTGGAAAGCAACTTTTTCTCCTTGGGGATGACCAACTTTGCTGTGAAAGATGAGTCCATCGATGAATTGGAGGAGGAATTGAGAAGGGTAACCTTAGAAAACAAGAAATTGGTGGAAATGCTCTCAGTGGTTTGTGAGAATTACAACACTTTGAGAAGTCATTTGATGGAATACATGAAGAGAAATCCTGAGAAAGAAGTAAGCACATCATCAAAGAAAAGGAAATCTGAAAGCAGCAATAATAACAATAGTAATTTGATTGGAATTAACAATGGAAATTCCGAGAGTAGCTCTACCGATGAAGAATCGTGTAAGAAACCAAGGGAAGAAGAAAATATTAAAGCCAAAATTTCAAGAGCTTATGTTAGGACTGAAGCTTCTGATACAGGCCTTATTGTGAAGGATGGATATCATTGGAGGAAATATGGACAAAAAGTGACTAGAGATAACCCTTGTCCAAGAGCTTATTTCAAATGCTCTTTTGCTCCAAGCTGCCCTGTCAAAAAGAAGGTGCAAAGAAGTGTTGATGATCAATCCATGCTTGTTGCTACTTATGAAGGGGAGCACAATCATCCTCAACCTCCTCAAATTGAGTCAACATCAGGTTCTGGCCGTAGCGTGAACCACAGTTCGGTACCTTGTTCGGCGTCACTCACCTCACCAGCAGCACCAAAAGTGGTTACACTTGACTCAACAACTTCTAAGAATAGTAAAGATTCCAAGAATATTGAACCAAGAAAAGATTCACCTAAGGTACCAAAGAATTTGGTGGAACAAATGGCTACTTCATTGACAACTGATCCAAATTTTAGAGCAGCACTTGTTGCAGCCATTTCAGGAAAATTGGTGCACAATAATTAA
Protein sequence

>Msa0625800

MDCSSYINTSLDLNIIPYRAHEEVPKKEVESNFFSLGMTNFAVKDESIDELEEELRRVTLENKKLVEMLSVVCENYNTLRSHLMEYMKRNPEKEVSTSSKKRKSESSNNNNSNLIGINNGNSESSSTDEESCKKPREEENIKAKISRAYVRTEASDTGLIVKDGYHWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVDDQSMLVATYEGEHNHPQPPQIESTSGSGRSVNHSSVPCSASLTSPAAPKVVTLDSTTSKNSKDSKNIEPRKDSPKVPKNLVEQMATSLTTDPNFRAALVAAISGKLVHNN*