AlfalfaGEDB | Msa0538160

M. sativa cultivar zhongmu-4 / Msa0538160

KEGG: -
GO: GO:0001067 GO:0001101 GO:0002237 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009719 GO:0009725 GO:0009751 GO:0009889 GO:0009890 GO:0009892 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031347 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044212 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0046677 GO:0048519 GO:0048523 GO:0048583 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0080090 GO:0080134 GO:0097159 GO:0098542 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
PFAM: PF03106.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0538160	AEI83414.1	99.054	317	0	1	1	314	1	317	0.0	641

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0538160	sp\|Q9SAH7\|WRK40_ARATH	51.724	319	120	7	4	314	6	298	2.12e-95	287

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0538160	F8V2K9	99.054	317	0	1	1	314	1	317	0.0	641

TFs/TRs:

Gene ID	Type	Classification
Msa0538160	TF	WRKY

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0017320	Msa0538160	0.811102	8.282232e-51	-8.615850e-47
Msa0033850	Msa0538160	0.819079	1.401939e-52	-8.615850e-47
Msa0045550	Msa0538160	0.811355	7.298296e-51	-8.615850e-47
Msa0055070	Msa0538160	0.801160	1.026420e-48	-8.615850e-47
Msa0071480	Msa0538160	0.811634	6.345632e-51	-8.615850e-47
Msa0081940	Msa0538160	0.806121	9.593036e-50	-8.615850e-47
Msa0082050	Msa0538160	0.801646	8.163679e-49	-8.615850e-47
Msa0090390	Msa0538160	0.801869	7.346360e-49	-8.615850e-47
Msa0101020	Msa0538160	0.806665	7.366116e-50	-8.615850e-47
Msa0119440	Msa0538160	0.823791	1.144939e-53	-8.615850e-47
Msa0128430	Msa0538160	0.820093	8.229217e-53	-8.615850e-47
Msa0136630	Msa0538160	0.808845	2.535040e-50	-8.615850e-47
Msa0137870	Msa0538160	0.801398	9.177512e-49	-8.615850e-47
Msa0145110	Msa0538160	0.804347	2.257087e-49	-8.615850e-47
Msa0174260	Msa0538160	0.811003	8.698662e-51	-8.615850e-47
Msa0175050	Msa0538160	0.807657	4.541648e-50	-8.615850e-47
Msa0179100	Msa0538160	0.803964	2.710774e-49	-8.615850e-47
Msa0187490	Msa0538160	0.804923	1.710709e-49	-8.615850e-47
Msa0190950	Msa0538160	0.812704	3.708775e-51	-8.615850e-47
Msa0193540	Msa0538160	0.819240	1.288353e-52	-8.615850e-47
Msa0194010	Msa0538160	0.858741	6.690741e-63	-8.615850e-47
Msa0200650	Msa0538160	0.809498	1.836556e-50	-8.615850e-47
Msa0202930	Msa0538160	0.813665	2.281994e-51	-8.615850e-47
Msa0213430	Msa0538160	0.804378	2.223249e-49	-8.615850e-47
Msa0235880	Msa0538160	0.858427	8.299684e-63	-8.615850e-47
Msa0236070	Msa0538160	0.806904	6.557732e-50	-8.615850e-47
Msa0364790	Msa0538160	0.813854	2.073457e-51	-8.615850e-47
Msa0380600	Msa0538160	0.803555	3.295955e-49	-8.615850e-47
Msa0403490	Msa0538160	0.842510	2.474465e-58	-8.615850e-47
Msa0418400	Msa0538160	0.803206	3.893075e-49	-8.615850e-47
Msa0430240	Msa0538160	0.805498	1.297035e-49	-8.615850e-47
Msa0472720	Msa0538160	0.800893	1.163820e-48	-8.615850e-47
Msa0472770	Msa0538160	0.817441	3.292934e-52	-8.615850e-47
Msa0240270	Msa0538160	0.803420	3.515304e-49	-8.615850e-47
Msa0274630	Msa0538160	0.826074	3.311473e-54	-8.615850e-47
Msa0284240	Msa0538160	0.805235	1.471935e-49	-8.615850e-47
Msa0284450	Msa0538160	0.807040	6.138103e-50	-8.615850e-47
Msa0304840	Msa0538160	0.813898	2.027650e-51	-8.615850e-47
Msa0314060	Msa0538160	0.808782	2.614605e-50	-8.615850e-47
Msa0341230	Msa0538160	0.817158	3.812905e-52	-8.615850e-47
Msa0514610	Msa0538160	0.844246	8.515723e-59	-8.615850e-47
Msa0538160	Msa0569780	0.803387	3.571857e-49	-8.615850e-47
Msa0538160	Msa0583670	0.815435	9.256912e-52	-8.615850e-47
Msa0538160	Msa0585910	0.895140	1.271687e-75	-8.615850e-47
Msa0538160	Msa0615550	0.818112	2.323433e-52	-8.615850e-47
Msa0538160	Msa0625800	0.889286	2.775391e-73	-8.615850e-47
Msa0538160	Msa0641340	0.814670	1.368898e-51	-8.615850e-47
Msa0538160	Msa0663520	0.988374	9.084356e-174	-8.615850e-47
Msa0538160	Msa0698440	0.809152	2.179165e-50	-8.615850e-47
Msa0538160	Msa0707430	0.807256	5.524541e-50	-8.615850e-47
Msa0538160	Msa0714990	0.814629	1.397482e-51	-8.615850e-47
Msa0538160	Msa0721340	0.819672	1.027232e-52	-8.615850e-47
Msa0538160	Msa0724370	0.804680	1.923117e-49	-8.615850e-47
Msa0538160	Msa0757020	0.810706	1.008996e-50	-8.615850e-47
Msa0538160	Msa0758250	0.840050	1.097797e-57	-8.615850e-47
Msa0538160	Msa0764920	0.833575	4.929757e-56	-8.615850e-47
Msa0538160	Msa0775560	0.802324	5.921015e-49	-8.615850e-47
Msa0538160	Msa0776750	0.807636	4.589313e-50	-8.615850e-47
Msa0538160	Msa0809140	0.825032	5.848597e-54	-8.615850e-47
Msa0538160	Msa0812950	0.805730	1.159327e-49	-8.615850e-47
Msa0538160	Msa0836650	0.819260	1.275231e-52	-8.615850e-47
Msa0538160	Msa0844610	0.820064	8.357219e-53	-8.615850e-47
Msa0538160	Msa0845070	0.801122	1.044848e-48	-8.615850e-47
Msa0538160	Msa0857300	0.800635	1.313996e-48	-8.615850e-47
Msa0538160	Msa1019120	0.848939	4.452667e-60	-8.615850e-47
Msa0538160	Msa1034700	0.847724	9.650820e-60	-8.615850e-47
Msa0538160	Msa1036910	0.830344	3.095736e-55	-8.615850e-47
Msa0538160	Msa1074540	0.839341	1.679497e-57	-8.615850e-47
Msa0538160	Msa1115010	0.822801	1.949876e-53	-8.615850e-47
Msa0538160	Msa1127430	0.806219	9.146597e-50	-8.615850e-47
Msa0538160	Msa1164020	0.811712	6.104196e-51	-8.615850e-47
Msa0538160	Msa1209190	0.847243	1.308000e-59	-8.615850e-47
Msa0538160	Msa1209860	0.829205	5.863185e-55	-8.615850e-47
Msa0538160	Msa1214170	0.800559	1.361853e-48	-8.615850e-47
Msa0538160	Msa1225200	0.802238	6.169466e-49	-8.615850e-47
Msa0538160	Msa1225600	0.817533	3.138889e-52	-8.615850e-47
Msa0538160	Msa1258370	0.801712	7.910037e-49	-8.615850e-47
Msa0538160	Msa1297960	0.818089	2.351793e-52	-8.615850e-47
Msa0538160	Msa1330780	0.805505	1.292562e-49	-8.615850e-47
Msa0538160	Msa1332050	0.814320	1.635874e-51	-8.615850e-47
Msa0538160	Msa1336040	0.822736	2.019545e-53	-8.615850e-47
Msa0538160	Msa1341490	0.809360	1.966694e-50	-8.615850e-47
Msa0538160	Msa1359320	0.818005	2.455914e-52	-8.615850e-47
Msa0538160	Msa1360020	0.801056	1.078206e-48	-8.615850e-47
Msa0538160	Msa1397670	0.811775	5.913814e-51	-8.615850e-47
Msa0538160	Msa1421900	0.813650	2.298827e-51	-8.615850e-47
Msa0538160	Msa1426570	0.803471	3.432214e-49	-8.615850e-47
Msa0538160	Msa1465180	0.863006	3.385808e-64	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0538160	MtrunA17_Chr4g0001361	97.792	317	4	1	1	314	1	317	0.0	634
Msa0538160	MtrunA17_Chr2g0333851	57.099	324	114	9	4	314	5	316	2.94e-108	317
Msa0538160	MtrunA17_Chr3g0136961	47.619	315	121	13	7	311	6	286	7.78e-74	229
Msa0538160	MtrunA17_Chr1g0150281	46.209	277	121	8	43	311	20	276	1.80e-63	202
Msa0538160	MtrunA17_Chr1g0150271	37.500	264	128	6	45	307	6	233	1.05e-42	147
Msa0538160	MtrunA17_Chr7g0270831	30.719	306	156	9	51	307	100	398	1.34e-36	135
Msa0538160	MtrunA17_Chr2g0288871	34.649	228	102	5	43	223	139	366	8.06e-35	132
Msa0538160	MtrunA17_Chr4g0075201	29.365	252	138	5	6	223	83	328	2.34e-31	122
Msa0538160	MtrunA17_Chr3g0099641	33.654	208	93	5	145	307	234	441	1.02e-29	117
Msa0538160	MtrunA17_Chr2g0322391	25.722	381	158	9	51	307	173	552	3.24e-27	111
Msa0538160	MtrunA17_Chr4g0051181	54.762	84	31	2	140	222	226	303	1.71e-26	108
Msa0538160	MtrunA17_Chr7g0216891	56.098	82	34	2	139	220	198	277	1.38e-25	106
Msa0538160	MtrunA17_Chr4g0060271	57.500	80	32	2	143	222	238	315	1.94e-25	106
Msa0538160	MtrunA17_Chr4g0025051	50.000	84	42	0	139	222	312	395	2.96e-25	105
Msa0538160	MtrunA17_Chr2g0302391	41.284	109	64	0	137	245	186	294	8.05e-25	103
Msa0538160	MtrunA17_Chr4g0025061	33.775	151	76	3	139	265	337	487	3.64e-23	99.8
Msa0538160	MtrunA17_Chr5g0401821	43.200	125	58	4	95	219	145	256	1.23e-21	92.4
Msa0538160	MtrunA17_Chr2g0294231	58.065	62	25	1	161	222	202	262	4.93e-20	89.4
Msa0538160	MtrunA17_Chr4g0053281	60.000	60	24	0	160	219	264	323	9.34e-20	88.2
Msa0538160	MtrunA17_Chr1g0194481	56.452	62	26	1	161	222	157	217	1.74e-19	87.4
Msa0538160	MtrunA17_Chr5g0445311	57.143	63	26	1	160	222	362	423	4.85e-19	87.4
Msa0538160	MtrunA17_Chr5g0445311	50.000	60	28	2	163	222	201	258	1.73e-12	67.8
Msa0538160	MtrunA17_Chr7g0270191	39.655	116	59	4	133	248	126	230	6.31e-19	85.1
Msa0538160	MtrunA17_Chr3g0106491	40.157	127	60	5	120	238	315	433	6.32e-19	87.0
Msa0538160	MtrunA17_Chr3g0106491	53.333	60	26	2	163	222	199	256	1.17e-15	77.4
Msa0538160	MtrunA17_Chr3g0101131	57.143	63	26	1	160	222	413	474	1.00e-18	86.7
Msa0538160	MtrunA17_Chr3g0101131	50.000	60	28	2	163	222	244	301	2.39e-12	67.4
Msa0538160	MtrunA17_Chr5g0432161	52.055	73	30	2	160	232	419	486	1.01e-18	86.7
Msa0538160	MtrunA17_Chr5g0432161	53.333	60	26	2	163	222	245	302	1.22e-15	77.4
Msa0538160	MtrunA17_Chr1g0147881	52.778	72	32	1	150	219	248	319	1.23e-18	85.1
Msa0538160	MtrunA17_Chr1g0150801	52.459	61	28	1	160	220	100	159	2.24e-18	80.9
Msa0538160	MtrunA17_Chr5g0447701	51.948	77	34	3	146	222	238	311	2.60e-18	84.7
Msa0538160	MtrunA17_Chr5g0447701	44.444	63	33	2	160	222	90	150	2.36e-11	63.9
Msa0538160	MtrunA17_Chr4g0051881	51.613	62	29	1	161	222	177	237	2.99e-18	84.0
Msa0538160	MtrunA17_Chr4g0071521	43.299	97	51	2	125	221	212	304	3.18e-18	83.6
Msa0538160	MtrunA17_Chr2g0293481	49.367	79	39	1	157	234	261	339	3.84e-18	84.7
Msa0538160	MtrunA17_Chr7g0263531	52.381	63	29	1	160	222	359	420	6.63e-18	84.0
Msa0538160	MtrunA17_Chr7g0263531	50.725	69	32	2	163	231	190	256	8.55e-17	80.5
Msa0538160	MtrunA17_Chr7g0243891	39.806	103	57	3	160	262	372	469	6.97e-18	84.0
Msa0538160	MtrunA17_Chr7g0243891	50.820	61	28	2	162	222	216	274	5.71e-14	72.4
Msa0538160	MtrunA17_Chr1g0184691	53.125	64	30	0	160	223	291	354	9.19e-18	82.8
Msa0538160	MtrunA17_Chr5g0418191	52.381	63	29	1	160	222	318	379	1.53e-17	82.8
Msa0538160	MtrunA17_Chr5g0418191	53.333	60	26	2	163	222	152	209	5.12e-14	72.4
Msa0538160	MtrunA17_Chr1g0188941	49.206	63	31	1	160	222	49	110	2.87e-17	76.3
Msa0538160	MtrunA17_Chr7g0224801	52.459	61	28	1	160	220	91	150	3.08e-17	77.8
Msa0538160	MtrunA17_Chr7g0248721	41.379	116	56	5	112	220	87	197	3.53e-17	79.0
Msa0538160	MtrunA17_Chr3g0079691	53.968	63	28	1	160	222	493	554	5.02e-17	81.6
Msa0538160	MtrunA17_Chr3g0079691	48.571	70	34	2	154	223	272	339	9.82e-15	74.7
Msa0538160	MtrunA17_Chr7g0270051	47.761	67	35	0	163	229	54	120	5.25e-17	79.3
Msa0538160	MtrunA17_Chr4g0042831	52.381	63	29	1	160	222	276	337	5.97e-17	80.9
Msa0538160	MtrunA17_Chr4g0042831	50.000	60	29	1	163	222	146	204	4.87e-12	66.2
Msa0538160	MtrunA17_Chr4g0074001	32.203	177	97	5	92	252	288	457	6.94e-17	80.9
Msa0538160	MtrunA17_Chr4g0004911	52.381	63	29	1	160	222	334	395	8.54e-17	80.9
Msa0538160	MtrunA17_Chr4g0004911	35.593	118	70	3	162	275	184	299	9.89e-16	77.4
Msa0538160	MtrunA17_Chr5g0443131	49.231	65	32	1	161	225	156	219	8.74e-17	79.3
Msa0538160	MtrunA17_Chr7g0218081	53.333	60	27	1	160	219	408	466	1.61e-16	80.1
Msa0538160	MtrunA17_Chr7g0218081	51.613	62	26	3	163	222	229	288	6.70e-13	68.9
Msa0538160	MtrunA17_Chr4g0024391	32.673	101	64	1	139	235	206	306	1.79e-16	79.7
Msa0538160	MtrunA17_Chr8g0348311	46.479	71	38	0	163	233	156	226	2.76e-16	78.2
Msa0538160	MtrunA17_Chr8g0387501	44.444	81	41	1	163	239	130	210	3.46e-16	77.0
Msa0538160	MtrunA17_Chr8g0386241	47.541	61	31	1	160	220	101	160	4.72e-16	75.1
Msa0538160	MtrunA17_Chr7g0249311	52.381	63	29	1	160	222	390	451	6.07e-16	78.6
Msa0538160	MtrunA17_Chr7g0249311	49.180	61	29	2	162	222	179	237	1.11e-11	65.5
Msa0538160	MtrunA17_Chr8g0379461	50.000	60	30	0	163	222	77	136	7.71e-16	75.9
Msa0538160	MtrunA17_Chr7g0249301	50.794	63	30	1	160	222	290	351	8.24e-16	77.4
Msa0538160	MtrunA17_Chr7g0249301	46.774	62	31	2	161	222	61	120	2.82e-11	63.9
Msa0538160	MtrunA17_Chr7g0248691	34.167	120	77	1	160	277	152	271	9.00e-16	76.6
Msa0538160	MtrunA17_Chr2g0289181	47.541	61	32	0	162	222	14	74	1.46e-15	74.7
Msa0538160	MtrunA17_Chr3g0129321	50.794	63	30	1	160	222	116	177	1.55e-15	73.9
Msa0538160	MtrunA17_Chr8g0383251	50.794	63	30	1	160	222	106	167	1.79e-15	73.6
Msa0538160	MtrunA17_Chr4g0068541	48.387	62	31	1	161	222	207	267	1.79e-15	76.6
Msa0538160	MtrunA17_Chr3g0139021	46.269	67	36	0	160	226	312	378	2.04e-15	76.3
Msa0538160	MtrunA17_Chr5g0418781	49.153	59	29	1	161	219	123	180	2.24e-15	75.1
Msa0538160	MtrunA17_Chr2g0284321	45.902	61	33	0	163	223	36	96	3.57e-15	73.2
Msa0538160	MtrunA17_Chr7g0228941	46.667	60	32	0	160	219	50	109	4.44e-15	70.9
Msa0538160	MtrunA17_Chr8g0383351	43.836	73	39	2	147	219	146	216	5.02e-15	73.2
Msa0538160	MtrunA17_Chr8g0335811	50.000	60	29	1	160	219	152	210	5.59e-15	72.8
Msa0538160	MtrunA17_Chr3g0129361	48.333	60	30	1	160	219	142	200	8.08e-15	72.4
Msa0538160	MtrunA17_Chr7g0238921	50.820	61	29	1	163	223	125	184	2.03e-14	72.8
Msa0538160	MtrunA17_Chr1g0202461	43.056	72	41	0	163	234	262	333	2.46e-14	73.2
Msa0538160	MtrunA17_Chr2g0319961	48.333	60	31	0	163	222	81	140	1.25e-13	69.7
Msa0538160	MtrunA17_Chr5g0432071	45.000	60	31	2	163	222	105	162	1.30e-12	65.9
Msa0538160	MtrunA17_Chr5g0419241	42.593	54	31	0	137	190	52	105	3.26e-12	62.4
Msa0538160	MtrunA17_Chr5g0447711	36.264	91	49	3	149	239	217	298	3.43e-12	66.2
Msa0538160	MtrunA17_Chr1g0189391	43.662	71	36	3	150	219	87	154	4.17e-11	63.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0538160	AT1G80840.1	51.724	319	120	7	4	314	6	298	2.16e-96	287
Msa0538160	AT4G31800.1	45.566	327	140	5	1	311	1	305	8.78e-81	248
Msa0538160	AT2G25000.1	42.208	308	129	7	12	313	4	268	8.04e-65	205
Msa0538160	AT4G31800.2	45.000	260	107	4	68	311	1	240	4.99e-63	200
Msa0538160	AT2G25000.2	44.030	268	103	6	51	314	2	226	1.00e-60	193
Msa0538160	AT2G25000.4	44.030	268	103	6	51	314	2	226	1.00e-60	193
Msa0538160	AT2G25000.3	44.195	267	102	6	51	313	24	247	5.20e-60	192
Msa0538160	AT4G31800.3	48.837	215	92	3	1	199	1	213	1.09e-56	183
Msa0538160	AT1G62300.1	30.686	277	126	7	50	260	159	435	2.44e-32	126
Msa0538160	AT4G01720.1	32.178	202	111	4	48	223	99	300	7.62e-28	113
Msa0538160	AT4G04450.2	37.500	160	74	4	129	262	165	324	2.04e-27	111
Msa0538160	AT4G04450.1	37.500	160	74	4	129	262	259	418	5.46e-27	110
Msa0538160	AT4G22070.4	51.220	82	40	0	142	223	277	358	8.46e-27	110
Msa0538160	AT4G22070.3	51.220	82	40	0	142	223	277	358	8.46e-27	110
Msa0538160	AT4G22070.2	51.220	82	40	0	142	223	277	358	8.46e-27	110
Msa0538160	AT4G22070.1	51.220	82	40	0	142	223	277	358	8.46e-27	110
Msa0538160	AT1G68150.1	53.571	84	32	2	140	222	218	295	2.69e-25	104
Msa0538160	AT1G18860.1	61.290	62	24	0	161	222	238	299	3.75e-24	102
Msa0538160	AT5G15130.2	52.564	78	37	0	145	222	168	245	5.17e-24	102
Msa0538160	AT5G15130.1	52.564	78	37	0	145	222	210	287	5.62e-24	102
Msa0538160	AT5G07100.2	36.806	144	83	5	79	222	65	200	1.80e-21	90.9
Msa0538160	AT5G07100.2	37.168	113	61	3	163	274	25	128	3.35e-15	73.9
Msa0538160	AT5G07100.4	36.806	144	83	5	79	222	65	200	1.80e-21	90.9
Msa0538160	AT5G07100.4	37.168	113	61	3	163	274	25	128	3.35e-15	73.9
Msa0538160	AT5G07100.5	36.806	144	83	5	79	222	65	200	1.80e-21	90.9
Msa0538160	AT5G07100.5	37.168	113	61	3	163	274	25	128	3.35e-15	73.9
Msa0538160	AT5G07100.3	36.806	144	83	5	79	222	65	200	1.80e-21	90.9
Msa0538160	AT5G07100.3	37.168	113	61	3	163	274	25	128	3.35e-15	73.9
Msa0538160	AT5G07100.1	36.806	144	83	5	79	222	158	293	3.10e-21	92.4
Msa0538160	AT5G07100.1	42.857	77	43	1	163	239	118	193	1.06e-14	73.9
Msa0538160	AT2G04880.2	50.617	81	31	2	160	240	281	352	4.94e-21	93.6
Msa0538160	AT2G04880.2	44.444	63	33	2	160	222	109	169	4.26e-13	70.1
Msa0538160	AT2G04880.1	50.617	81	31	2	160	240	305	376	5.63e-21	93.6
Msa0538160	AT2G04880.1	44.444	63	33	2	160	222	109	169	4.87e-13	69.7
Msa0538160	AT5G13080.1	43.269	104	56	2	117	220	24	124	6.91e-20	84.7
Msa0538160	AT4G31550.1	40.351	114	64	2	119	232	207	316	7.87e-20	88.6
Msa0538160	AT1G69810.1	27.273	264	123	7	26	222	3	264	1.13e-19	89.0
Msa0538160	AT2G30590.1	39.091	110	63	2	114	223	269	374	1.99e-19	88.2
Msa0538160	AT1G29860.1	44.828	87	38	2	161	238	135	220	2.48e-19	86.7
Msa0538160	AT4G31550.2	52.055	73	35	0	160	232	243	315	3.28e-19	87.0
Msa0538160	AT2G38470.1	45.652	92	45	2	160	251	360	446	4.26e-19	88.2
Msa0538160	AT2G38470.1	54.098	61	26	2	162	222	184	242	5.75e-16	78.6
Msa0538160	AT1G69810.2	44.828	87	45	2	137	222	122	206	5.39e-19	86.3
Msa0538160	AT2G23320.1	57.895	57	24	0	163	219	241	297	6.62e-19	85.9
Msa0538160	AT2G24570.1	41.748	103	56	2	119	221	204	302	1.10e-18	85.5
Msa0538160	AT1G55600.1	59.016	61	24	1	163	223	308	367	1.42e-18	86.3
Msa0538160	AT5G26170.1	53.333	60	27	1	160	219	111	169	2.28e-18	81.6
Msa0538160	AT5G56270.1	55.556	63	27	1	160	222	485	546	3.50e-18	85.5
Msa0538160	AT5G56270.1	30.481	187	109	4	43	223	161	332	1.58e-14	74.7
Msa0538160	AT3G04670.1	41.584	101	55	2	119	219	223	319	4.00e-18	84.0
Msa0538160	AT5G49520.1	53.226	62	28	1	161	222	220	280	4.15e-18	84.7
Msa0538160	AT3G62340.1	50.685	73	35	1	159	231	115	186	5.06e-18	82.8
Msa0538160	AT4G18170.1	51.613	62	29	1	161	222	171	231	5.14e-18	83.6
Msa0538160	AT4G26640.5	55.556	63	27	1	160	222	203	264	5.95e-18	84.0
Msa0538160	AT4G26640.5	41.250	80	45	2	152	231	25	102	1.45e-12	68.2
Msa0538160	AT4G26640.6	55.556	63	27	1	160	222	203	264	5.95e-18	84.0
Msa0538160	AT4G26640.6	41.250	80	45	2	152	231	25	102	1.45e-12	68.2
Msa0538160	AT4G26640.4	55.556	63	27	1	160	222	203	264	5.95e-18	84.0
Msa0538160	AT4G26640.4	41.250	80	45	2	152	231	25	102	1.45e-12	68.2
Msa0538160	AT4G26640.3	55.556	63	27	1	160	222	203	264	5.95e-18	84.0
Msa0538160	AT4G26640.3	41.250	80	45	2	152	231	25	102	1.45e-12	68.2
Msa0538160	AT4G24240.1	44.318	88	45	2	132	219	255	338	6.27e-18	83.6
Msa0538160	AT1G13960.2	53.968	63	28	1	160	222	254	315	6.84e-18	83.6
Msa0538160	AT1G13960.2	56.452	62	24	3	163	224	77	135	1.35e-15	77.0
Msa0538160	AT1G64000.1	39.796	98	54	3	132	229	88	180	7.10e-18	80.9
Msa0538160	AT1G13960.1	55.000	60	26	1	160	219	407	465	7.73e-18	84.3
Msa0538160	AT1G13960.1	56.452	62	24	3	163	224	230	288	1.29e-15	77.8
Msa0538160	AT5G28650.1	41.584	101	55	2	119	219	223	319	8.29e-18	83.2
Msa0538160	AT5G41570.1	46.753	77	38	2	144	220	82	155	8.54e-18	80.1
Msa0538160	AT4G26640.2	55.556	63	27	1	160	222	379	440	8.75e-18	84.3
Msa0538160	AT4G26640.2	43.662	71	38	2	152	222	201	269	1.98e-12	68.2
Msa0538160	AT4G26640.7	56.667	60	25	1	160	219	339	397	8.77e-18	84.0
Msa0538160	AT4G26640.7	43.662	71	38	2	152	222	161	229	2.02e-12	68.2
Msa0538160	AT4G26640.1	55.556	63	27	1	160	222	307	368	8.90e-18	84.0
Msa0538160	AT4G26640.1	41.250	80	45	2	152	231	129	206	1.97e-12	68.2
Msa0538160	AT1G29280.1	51.667	60	29	0	163	222	75	134	9.54e-18	81.6
Msa0538160	AT2G03340.1	53.968	63	28	1	160	222	413	474	1.10e-17	84.0
Msa0538160	AT2G03340.1	44.048	84	45	2	151	234	239	320	2.55e-15	76.6
Msa0538160	AT2G47260.1	54.839	62	27	1	161	222	173	233	2.46e-17	81.6
Msa0538160	AT5G46350.1	42.697	89	47	2	161	246	182	269	2.46e-17	81.6
Msa0538160	AT2G30250.1	43.750	96	45	4	133	222	295	387	3.16e-17	82.0
Msa0538160	AT2G30250.1	48.333	60	29	2	163	222	167	224	5.73e-12	66.2
Msa0538160	AT3G01080.2	52.381	63	29	1	160	222	342	403	4.80e-17	81.6
Msa0538160	AT3G01080.2	51.667	60	27	2	163	222	206	263	1.64e-12	68.2
Msa0538160	AT2G37260.2	45.977	87	44	3	136	222	58	141	5.16e-17	80.9
Msa0538160	AT2G37260.2	35.135	111	58	3	116	219	220	323	5.66e-15	75.1
Msa0538160	AT2G37260.3	45.977	87	44	3	136	222	60	143	5.25e-17	80.9
Msa0538160	AT2G37260.3	35.135	111	58	3	116	219	222	325	5.79e-15	75.1
Msa0538160	AT3G01080.1	52.381	63	29	1	160	222	304	365	5.31e-17	81.6
Msa0538160	AT3G01080.1	51.667	60	27	2	163	222	168	225	1.73e-12	68.2
Msa0538160	AT2G37260.1	45.977	87	44	3	136	222	140	223	6.50e-17	81.3
Msa0538160	AT2G37260.1	35.135	111	58	3	116	219	302	405	5.94e-15	75.5
Msa0538160	AT3G01970.1	53.333	60	27	1	160	219	63	121	8.58e-17	76.6
Msa0538160	AT1G69310.4	52.542	59	27	1	161	219	146	203	1.25e-16	79.0
Msa0538160	AT1G69310.2	52.542	59	27	1	161	219	146	203	1.25e-16	79.0
Msa0538160	AT1G69310.1	52.542	59	27	1	161	219	146	203	1.25e-16	79.0
Msa0538160	AT4G30935.1	45.946	74	38	2	149	222	319	390	1.40e-16	80.5
Msa0538160	AT2G21900.1	49.254	67	33	1	156	222	103	168	1.62e-16	77.0
Msa0538160	AT2G34830.1	35.115	131	75	2	109	230	154	283	1.92e-16	79.7
Msa0538160	AT2G34830.2	35.115	131	75	2	109	230	163	292	2.18e-16	79.7
Msa0538160	AT4G01250.1	45.070	71	39	0	163	233	129	199	4.50e-16	77.8
Msa0538160	AT1G30650.1	45.833	72	39	0	159	230	214	285	7.39e-16	78.2
Msa0538160	AT5G64810.1	37.000	100	60	2	120	219	70	166	1.37e-15	74.3
Msa0538160	AT5G52830.1	37.963	108	64	1	163	267	166	273	1.41e-15	76.6
Msa0538160	AT5G43290.1	41.176	85	48	2	135	219	88	170	1.52e-15	75.9
Msa0538160	AT2G44745.1	48.571	70	33	2	160	229	143	209	1.99e-15	74.3
Msa0538160	AT4G26440.1	52.381	63	29	1	160	222	370	431	2.40e-15	77.0
Msa0538160	AT4G26440.1	47.541	61	30	2	163	223	179	237	2.30e-12	67.8
Msa0538160	AT2G46130.1	50.820	61	29	1	160	220	28	87	4.02e-15	70.9
Msa0538160	AT3G58710.2	46.154	78	38	1	163	240	71	144	6.73e-15	73.9
Msa0538160	AT3G58710.1	46.154	78	38	1	163	240	72	145	6.88e-15	73.9
Msa0538160	AT4G39410.1	50.000	60	29	1	160	219	221	279	7.42e-15	74.3
Msa0538160	AT5G45050.1	30.405	148	89	3	83	230	1115	1248	1.51e-14	75.1
Msa0538160	AT5G45050.4	30.405	148	89	3	83	230	976	1109	1.59e-14	74.7
Msa0538160	AT5G45050.2	30.405	148	89	3	83	230	1087	1220	1.79e-14	74.7
Msa0538160	AT5G45260.1	35.833	120	70	3	121	238	1172	1286	9.83e-14	72.4
Msa0538160	AT4G23550.1	31.613	155	88	5	160	314	138	274	2.12e-13	70.1
Msa0538160	AT1G69310.3	50.847	59	24	2	161	219	146	199	9.80e-13	67.8
Msa0538160	AT3G01080.3	51.667	60	27	2	163	222	206	263	1.20e-12	67.8
Msa0538160	AT3G32090.1	46.753	77	34	2	180	249	76	152	3.12e-12	64.7
Msa0538160	AT4G12020.6	38.824	85	50	2	161	245	467	549	1.00e-11	66.2
Msa0538160	AT4G12020.8	38.824	85	50	2	161	245	467	549	1.00e-11	66.2
Msa0538160	AT4G12020.10	38.824	85	50	2	161	245	467	549	1.02e-11	66.2
Msa0538160	AT4G12020.7	38.824	85	50	2	161	245	467	549	1.07e-11	66.2
Msa0538160	AT4G12020.3	38.824	85	50	2	161	245	467	549	1.07e-11	66.2
Msa0538160	AT4G12020.1	38.824	85	50	2	161	245	467	549	1.08e-11	66.2
Msa0538160	AT4G12020.9	38.824	85	50	2	161	245	467	549	1.08e-11	66.2
Msa0538160	AT4G12020.5	38.824	85	50	2	161	245	400	482	1.10e-11	66.2
Msa0538160	AT4G12020.4	38.824	85	50	2	161	245	467	549	1.17e-11	66.2
Msa0538160	AT4G12020.2	38.824	85	50	2	161	245	467	549	1.17e-11	66.2
Msa0538160	AT4G12020.11	38.824	85	50	2	161	245	467	549	1.64e-11	65.9
Msa0538160	AT2G46130.2	49.180	61	26	2	160	220	28	83	3.19e-11	59.7

Find 79 sgRNAs with CRISPR-Local

Find 147 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AACATAAGCTCTTGAAATTT+TGG	0.096984	4_1:+17295632	None:intergenic
ACAAGTGCTGCTCTAAAATT+TGG	0.202946	4_1:+17294603	None:intergenic
ACCTAAGGTACCAAAGAATT+TGG	0.225108	4_1:-17294658	Msa0538160:CDS
ATTAAGTATATTCCATAAAA+TGG	0.248902	4_1:-17294502	Msa0538160:three_prime_UTR
GGATATCATTGGAGGAAATA+TGG	0.293100	4_1:-17295317	Msa0538160:CDS
GCACTTGTTGCAGCCATTTC+AGG	0.295741	4_1:-17294588	Msa0538160:CDS
ATTTGTTCCACCAAATTCTT+TGG	0.303785	4_1:+17294648	None:intergenic
CACTTTGAGAAGTCATTTGA+TGG	0.316280	4_1:-17295829	Msa0538160:CDS
ATTTCAGTCCATCGATGAAT+TGG	0.333220	4_1:-17295928	Msa0538160:intron
AACCTTAGAAAACAAGAAAT+TGG	0.335631	4_1:-17295886	Msa0538160:CDS
AATAACAATAGTAATTTGAT+TGG	0.348469	4_1:-17295735	Msa0538160:CDS
AACTTCTTCATGAGCTCTAT+AGG	0.350958	4_1:+17296670	None:intergenic
GAGTCTAGTGTAACCACTTT+TGG	0.357544	4_1:+17294735	None:intergenic
CCACAGTTCGGTACCTTGTT+CGG	0.368882	4_1:-17294781	Msa0538160:CDS
GATGTGCTTACTTCTTTCTC+AGG	0.378143	4_1:+17295789	None:intergenic
AAATTTCAAGAGCTTATGTT+AGG	0.384990	4_1:-17295629	Msa0538160:CDS
TGCAGCCATTTCAGGAAGAT+TGG	0.394147	4_1:-17294580	Msa0538160:CDS
ACCAAATTCTTTGGTACCTT+AGG	0.394330	4_1:+17294657	None:intergenic
TTGAGGTATCCTAGATACTT+TGG	0.407493	4_1:+17294394	None:intergenic
ACTTCTTCATGAGCTCTATA+GGG	0.416190	4_1:+17296671	None:intergenic
AAAGAATTTGGTGGAACAAA+TGG	0.417985	4_1:-17294646	Msa0538160:CDS
ATCATATATCAACACTTCCT+TGG	0.423806	4_1:-17296708	Msa0538160:CDS
ATTGAGTCAACATCTGGTTC+TGG	0.427798	4_1:-17294816	Msa0538160:CDS
AAGATAAGAGAAGTGGCTTA+AGG	0.436349	4_1:+17296833	None:intergenic
ATGCTTGTTGCTACTTATGA+AGG	0.438838	4_1:-17294867	Msa0538160:CDS
AGGACTGAAGCTTCTGATAC+AGG	0.439171	4_1:-17295609	Msa0538160:CDS
GAGCATTTGAAATAAGCTCT+TGG	0.448164	4_1:+17295266	None:intergenic
GTGCACCAATCTTCCTGAAA+TGG	0.450623	4_1:+17294575	None:intergenic
CCAGATGTTGACTCAATTTG+AGG	0.458383	4_1:+17294822	None:intergenic
CCTCAAATTGAGTCAACATC+TGG	0.462714	4_1:-17294822	Msa0538160:CDS
ACAATTTGGAATCTCATTTG+AGG	0.473956	4_1:+17294377	None:intergenic
TAAGCACATCATCAAAGAAA+AGG	0.475073	4_1:-17295776	Msa0538160:CDS
GACTCAATTTGAGGAGGTTG+AGG	0.489379	4_1:+17294831	None:intergenic
ATTGGTGCACAATAATTAAG+AGG	0.492425	4_1:-17294562	Msa0538160:exon
CTCATCTTTCACAGCAAAGT+TGG	0.495364	4_1:+17296496	None:intergenic
TGGTGCTGCTGGTGAGGTGA+GGG	0.497319	4_1:+17294755	None:intergenic
GAAGAAGGAAAGTGAGTGGA+AGG	0.502244	4_1:+17296948	None:intergenic
TTGAAATAAGCTCTTGGACA+AGG	0.504759	4_1:+17295272	None:intergenic
TTGGTGCTGCTGGTGAGGTG+AGG	0.509927	4_1:+17294754	None:intergenic
TCTTGGACAAGGGTTATCTC+TGG	0.515009	4_1:+17295283	None:intergenic
TTGGATTTATTTGGTAAACA+TGG	0.518013	4_1:-17296738	Msa0538160:exon
AATTTGATTGGAATTAACAA+TGG	0.518843	4_1:-17295723	Msa0538160:CDS
TGTTTATTTATAGAAGAAAG+AGG	0.523025	4_1:-17296549	Msa0538160:intron
TTGTGAAGGATGGATATCAT+TGG	0.540562	4_1:-17295328	Msa0538160:CDS
CCGAACTGTGGTTCACGCTA+CGG	0.542637	4_1:+17294793	None:intergenic
AATTGGAGGAGGAATTGAGA+AGG	0.543648	4_1:-17295911	Msa0538160:CDS
TGAAATAAGCTCTTGGACAA+GGG	0.544753	4_1:+17295273	None:intergenic
AATATTAAAGATAAGAGAAG+TGG	0.546755	4_1:+17296826	None:intergenic
TCAGTCCATCGATGAATTGG+AGG	0.547121	4_1:-17295925	Msa0538160:intron
GGGAATAATGTTGAGATCCA+AGG	0.551140	4_1:+17296691	None:intergenic
TAAGGTACCAAAGAATTTGG+TGG	0.555336	4_1:-17294655	Msa0538160:CDS
CTCACCAGCAGCACCAAAAG+TGG	0.557520	4_1:-17294748	Msa0538160:CDS
TGAGAAACTCAAGTTGAAGA+AGG	0.558196	4_1:+17296933	None:intergenic
TTCCTCCTCCAATTCATCGA+TGG	0.559559	4_1:+17295920	None:intergenic
CTTAGAAAACAAGAAATTGG+TGG	0.564034	4_1:-17295883	Msa0538160:CDS
ATTGGAGGAGGAATTGAGAA+GGG	0.565937	4_1:-17295910	Msa0538160:CDS
TGAATTAATAAATAAGCAAG+TGG	0.570016	4_1:-17297000	Msa0538160:five_prime_UTR
TGCTTGTTGCTACTTATGAA+GGG	0.570383	4_1:-17294866	Msa0538160:CDS
CCGTAGCGTGAACCACAGTT+CGG	0.575774	4_1:-17294793	Msa0538160:CDS
GTCCATCGATGAATTGGAGG+AGG	0.577129	4_1:-17295922	Msa0538160:CDS
TGAAGGATGGATATCATTGG+AGG	0.578215	4_1:-17295325	Msa0538160:CDS
TTTCTTACACGATTCTTCAT+CGG	0.585904	4_1:+17295680	None:intergenic
AAGAATCGTGTAAGAAACCA+AGG	0.593473	4_1:-17295674	Msa0538160:CDS
TTCATAAGTAGCAACAAGCA+TGG	0.599378	4_1:+17294869	None:intergenic
GAGGTGAGGGACGCCGAACA+AGG	0.604986	4_1:+17294768	None:intergenic
GCTTGTTGCTACTTATGAAG+GGG	0.612450	4_1:-17294865	Msa0538160:CDS
GGAAGGAGACACATGACATG+TGG	0.613013	4_1:+17296965	None:intergenic
AGTTGAAGAAGGAAAGTGAG+TGG	0.615014	4_1:+17296944	None:intergenic
AGCAAAGTTGGTCATCCCCA+AGG	0.617875	4_1:+17296508	None:intergenic
TTCATCGGTAGAGCTACTCT+CGG	0.622483	4_1:+17295695	None:intergenic
GAATTAATAAATAAGCAAGT+GGG	0.623957	4_1:-17296999	Msa0538160:five_prime_UTR
GATGTTGACTCAATTTGAGG+AGG	0.626749	4_1:+17294825	None:intergenic
ACCAAGAAAAGATTCACCTA+AGG	0.630943	4_1:-17294673	Msa0538160:CDS
GAAGGAGACACATGACATGT+GGG	0.646136	4_1:+17296966	None:intergenic
TTATTTATAGAAGAAAGAGG+TGG	0.649581	4_1:-17296546	Msa0538160:intron
CCGAACAAGGTACCGAACTG+TGG	0.683983	4_1:+17294781	None:intergenic
CAACTTTGCTGTGAAAGATG+AGG	0.688649	4_1:-17296495	Msa0538160:intron
ATTGGTGGAAATGCTCTCAG+TGG	0.691318	4_1:-17295868	Msa0538160:CDS
AGAATCGTGTAAGAAACCAA+GGG	0.696308	4_1:-17295673	Msa0538160:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ACAATATTTTTGGATTTATT+TGG	-	chr4_1:17294511-17294530	Msa0538160:three_prime_UTR	15.0%
!!!	ATATCAATTTTTATACTTAC+AGG	+	chr4_1:17294614-17294633	None:intergenic	15.0%
!!	ATCATCAATTATTAATTCAA+GGG	+	chr4_1:17295177-17295196	None:intergenic	15.0%
!!	AATCATCAATTATTAATTCA+AGG	+	chr4_1:17295178-17295197	None:intergenic	15.0%
!!	AATAACAATAGTAATTTGAT+TGG	-	chr4_1:17295523-17295542	Msa0538160:intron	15.0%
!!	ATTAAGTATATTCCATAAAA+TGG	-	chr4_1:17296756-17296775	Msa0538160:five_prime_UTR	15.0%
!!!	TTTATCAATTTGATCATTTT+TGG	-	chr4_1:17296839-17296858	Msa0538160:five_prime_UTR	15.0%
!!!	TTATCAATTTGATCATTTTT+GGG	-	chr4_1:17296840-17296859	Msa0538160:five_prime_UTR	15.0%
!!	TGAATTAATAAATAAGCAAG+TGG	-	chr4_1:17294258-17294277	Msa0538160:three_prime_UTR	20.0%
!!	GAATTAATAAATAAGCAAGT+GGG	-	chr4_1:17294259-17294278	Msa0538160:three_prime_UTR	20.0%
!!	AATATTAAAGATAAGAGAAG+TGG	+	chr4_1:17294435-17294454	None:intergenic	20.0%
!!	AAATCCAAAAATATTGTTCA+AGG	+	chr4_1:17294508-17294527	None:intergenic	20.0%
!!	TGTTTATTTATAGAAGAAAG+AGG	-	chr4_1:17294709-17294728	Msa0538160:CDS	20.0%
!!	AATAGAGAAATATACATAAG+TGG	+	chr4_1:17294861-17294880	None:intergenic	20.0%
!!	TAAACAAGTTATAGCTTATA+TGG	+	chr4_1:17295035-17295054	None:intergenic	20.0%
!!!	TTTTGTTTATTAGTCCATTA+TGG	-	chr4_1:17295249-17295268	Msa0538160:CDS	20.0%
!!	AATTTGATTGGAATTAACAA+TGG	-	chr4_1:17295535-17295554	Msa0538160:intron	20.0%
!!!	AAATTTGTTAAAGTCATGTT+TGG	+	chr4_1:17296101-17296120	None:intergenic	20.0%
!!	TATCAAAAACACATTCATTA+TGG	-	chr4_1:17296204-17296223	Msa0538160:intron	20.0%
!!	GTTTGGTTATTTATTTATTC+AGG	-	chr4_1:17296342-17296361	Msa0538160:intron	20.0%
!!!	TATCAATTTGATCATTTTTG+GGG	-	chr4_1:17296841-17296860	Msa0538160:five_prime_UTR	20.0%
!!!	GAATTTTTGCAATAACAATT+TGG	+	chr4_1:17296898-17296917	None:intergenic	20.0%
!!	TTGACCTTGAACAATATTTT+TGG	-	chr4_1:17294501-17294520	Msa0538160:three_prime_UTR	25.0%
!	TTGGATTTATTTGGTAAACA+TGG	-	chr4_1:17294520-17294539	Msa0538160:three_prime_UTR	25.0%
!	TTATTTATAGAAGAAAGAGG+TGG	-	chr4_1:17294712-17294731	Msa0538160:CDS	25.0%
!	TTGTTGAATTATGTCATGTT+TGG	-	chr4_1:17294803-17294822	Msa0538160:CDS	25.0%
!!	TTTGATACCATTAGTTTGAA+TGG	-	chr4_1:17295220-17295239	Msa0538160:intron	25.0%
!	ATAATCACCATTCAAACTAA+TGG	+	chr4_1:17295230-17295249	None:intergenic	25.0%
!!!	TTAAGAGTTTTTAGCCAAAA+GGG	+	chr4_1:17295280-17295299	None:intergenic	25.0%
!!!	TTTAAGAGTTTTTAGCCAAA+AGG	+	chr4_1:17295281-17295300	None:intergenic	25.0%
!	AACCTTAGAAAACAAGAAAT+TGG	-	chr4_1:17295372-17295391	Msa0538160:intron	25.0%
!!	TTAATATTTTCTTCTTCCCT+TGG	+	chr4_1:17295604-17295623	None:intergenic	25.0%
!!	AACATAAGCTCTTGAAATTT+TGG	+	chr4_1:17295629-17295648	None:intergenic	25.0%
!	AAATTTCAAGAGCTTATGTT+AGG	-	chr4_1:17295629-17295648	Msa0538160:CDS	25.0%
!	TGTAAGTTAAGTATCTTACA+AGG	+	chr4_1:17295675-17295694	None:intergenic	25.0%
!!!	TGTTTTAAAAACCGAACAAA+CGG	+	chr4_1:17295841-17295860	None:intergenic	25.0%
!	ACTAAAGTTTGTATAAGTGT+TGG	-	chr4_1:17295872-17295891	Msa0538160:CDS	25.0%
!!!	ACAAATTTGATTTTGTCTTG+AGG	-	chr4_1:17296113-17296132	Msa0538160:intron	25.0%
!!	AAAAAAACTGGTCCATTTTA+TGG	+	chr4_1:17296771-17296790	None:intergenic	25.0%
!!!	CTATTGCTCTAAAAAAAAAC+TGG	+	chr4_1:17296783-17296802	None:intergenic	25.0%
!!!	CAGTTTTTTTTTAGAGCAAT+AGG	-	chr4_1:17296781-17296800	Msa0538160:five_prime_UTR	25.0%
!!	TTGTTATTGCAAAAATTCCA+TGG	-	chr4_1:17296900-17296919	Msa0538160:five_prime_UTR	25.0%
	ATCATATATCAACACTTCCT+TGG	-	chr4_1:17294550-17294569	Msa0538160:exon	30.0%
!	ATGCTCTTGTTTGAAATGTT+TGG	-	chr4_1:17294664-17294683	Msa0538160:CDS	30.0%
	ATAGTGCATACTTCAACAAT+TGG	+	chr4_1:17294948-17294967	None:intergenic	30.0%
	CTTGTTTACATAAGCTATCT+TGG	-	chr4_1:17295047-17295066	Msa0538160:intron	30.0%
	GTCAGTAGATAAACTCAAAT+AGG	-	chr4_1:17295137-17295156	Msa0538160:intron	30.0%
!!!	CACCAATTTCTTGTTTTCTA+AGG	+	chr4_1:17295377-17295396	None:intergenic	30.0%
	CTTAGAAAACAAGAAATTGG+TGG	-	chr4_1:17295375-17295394	Msa0538160:intron	30.0%
	TAAGCACATCATCAAAGAAA+AGG	-	chr4_1:17295482-17295501	Msa0538160:intron	30.0%
	TTTCTTACACGATTCTTCAT+CGG	+	chr4_1:17295581-17295600	None:intergenic	30.0%
!!	TCGCTTTTGCGTATATTTAA+GGG	+	chr4_1:17295707-17295726	None:intergenic	30.0%
!!	ATCGCTTTTGCGTATATTTA+AGG	+	chr4_1:17295708-17295727	None:intergenic	30.0%
!!!	CGATGTTTTAAAAACCAAAC+CGG	-	chr4_1:17295724-17295743	Msa0538160:CDS	30.0%
!	AACCAACATTGTTTTCAGTT+CGG	+	chr4_1:17295799-17295818	None:intergenic	30.0%
!	ACGAAGATTTTTCTCATGTT+TGG	-	chr4_1:17296325-17296344	Msa0538160:intron	30.0%
!	TTTTCTTGGTTCAATACTCT+TGG	+	chr4_1:17296575-17296594	None:intergenic	30.0%
	ATTTGTTCCACCAAATTCTT+TGG	+	chr4_1:17296613-17296632	None:intergenic	30.0%
!	AAAGAATTTGGTGGAACAAA+TGG	-	chr4_1:17296612-17296631	Msa0538160:intron	30.0%
	ATTGGTGCACAATAATTAAG+AGG	-	chr4_1:17296696-17296715	Msa0538160:CDS	30.0%
!	ACAATTTGGAATCTCATTTG+AGG	+	chr4_1:17296884-17296903	None:intergenic	30.0%
!!	GAGAAATTCTTTTTCATCCA+TGG	+	chr4_1:17296920-17296939	None:intergenic	30.0%
!!	TGAGAAACTCAAGTTGAAGA+AGG	+	chr4_1:17294328-17294347	None:intergenic	35.0%
	AAGATAAGAGAAGTGGCTTA+AGG	+	chr4_1:17294428-17294447	None:intergenic	35.0%
	ACTTCTTCATGAGCTCTATA+GGG	+	chr4_1:17294590-17294609	None:intergenic	35.0%
	AACTTCTTCATGAGCTCTAT+AGG	+	chr4_1:17294591-17294610	None:intergenic	35.0%
!!	GAAAGCAACTTTTTCTCCTT+GGG	-	chr4_1:17294734-17294753	Msa0538160:CDS	35.0%
!!	AAAGCAACTTTTTCTCCTTG+GGG	-	chr4_1:17294735-17294754	Msa0538160:CDS	35.0%
	ATTTCAGTCCATCGATGAAT+TGG	-	chr4_1:17295330-17295349	Msa0538160:CDS	35.0%
!	CACTTTGAGAAGTCATTTGA+TGG	-	chr4_1:17295429-17295448	Msa0538160:intron	35.0%
	AAGAATCGTGTAAGAAACCA+AGG	-	chr4_1:17295584-17295603	Msa0538160:intron	35.0%
	AGAATCGTGTAAGAAACCAA+GGG	-	chr4_1:17295585-17295604	Msa0538160:intron	35.0%
!	GTTTTTAATGGTTCGATGTC+CGG	+	chr4_1:17295746-17295765	None:intergenic	35.0%
	TCGAACCATTAAAAACTCCA+AGG	-	chr4_1:17295750-17295769	Msa0538160:CDS	35.0%
	ACCATTAAAAACTCCAAGGA+TGG	-	chr4_1:17295754-17295773	Msa0538160:CDS	35.0%
	AACCGAACTGAAAACAATGT+TGG	-	chr4_1:17295794-17295813	Msa0538160:CDS	35.0%
!!	CTGAAAACAATGTTGGTTCA+CGG	-	chr4_1:17295801-17295820	Msa0538160:CDS	35.0%
!	TCTGTGTTTTCAGATTGTGA+AGG	-	chr4_1:17295916-17295935	Msa0538160:CDS	35.0%
!	TGTTTTCAGATTGTGAAGGA+TGG	-	chr4_1:17295920-17295939	Msa0538160:CDS	35.0%
	TTGTGAAGGATGGATATCAT+TGG	-	chr4_1:17295930-17295949	Msa0538160:intron	35.0%
	GGATATCATTGGAGGAAATA+TGG	-	chr4_1:17295941-17295960	Msa0538160:intron	35.0%
	TGAAATAAGCTCTTGGACAA+GGG	+	chr4_1:17295988-17296007	None:intergenic	35.0%
	TTGAAATAAGCTCTTGGACA+AGG	+	chr4_1:17295989-17296008	None:intergenic	35.0%
!	GAGCATTTGAAATAAGCTCT+TGG	+	chr4_1:17295995-17296014	None:intergenic	35.0%
!	GCTTTACCTTCTTTTTGACA+GGG	+	chr4_1:17296033-17296052	None:intergenic	35.0%
!	AGCTTTACCTTCTTTTTGAC+AGG	+	chr4_1:17296034-17296053	None:intergenic	35.0%
	TTCATAAGTAGCAACAAGCA+TGG	+	chr4_1:17296392-17296411	None:intergenic	35.0%
!	ATGCTTGTTGCTACTTATGA+AGG	-	chr4_1:17296391-17296410	Msa0538160:intron	35.0%
!	TGCTTGTTGCTACTTATGAA+GGG	-	chr4_1:17296392-17296411	Msa0538160:intron	35.0%
	ACCAAGAAAAGATTCACCTA+AGG	-	chr4_1:17296585-17296604	Msa0538160:intron	35.0%
!	ACCTTAGGTGAATCTTTTCT+TGG	+	chr4_1:17296589-17296608	None:intergenic	35.0%
!	ACCTAAGGTACCAAAGAATT+TGG	-	chr4_1:17296600-17296619	Msa0538160:intron	35.0%
	ACCAAATTCTTTGGTACCTT+AGG	+	chr4_1:17296604-17296623	None:intergenic	35.0%
!	TAAGGTACCAAAGAATTTGG+TGG	-	chr4_1:17296603-17296622	Msa0538160:intron	35.0%
!!	ACAAGTGCTGCTCTAAAATT+TGG	+	chr4_1:17296658-17296677	None:intergenic	35.0%
!	TTGAGGTATCCTAGATACTT+TGG	+	chr4_1:17296867-17296886	None:intergenic	35.0%
	AGTTGAAGAAGGAAAGTGAG+TGG	+	chr4_1:17294317-17294336	None:intergenic	40.0%
	GGGAATAATGTTGAGATCCA+AGG	+	chr4_1:17294570-17294589	None:intergenic	40.0%
!!	GGAAAGCAACTTTTTCTCCT+TGG	-	chr4_1:17294733-17294752	Msa0538160:CDS	40.0%
	CTCATCTTTCACAGCAAAGT+TGG	+	chr4_1:17294765-17294784	None:intergenic	40.0%
!	CAACTTTGCTGTGAAAGATG+AGG	-	chr4_1:17294763-17294782	Msa0538160:CDS	40.0%
	CCAAAAGGGTCATTCCATAA+TGG	+	chr4_1:17295266-17295285	None:intergenic	40.0%
!	CCATTATGGAATGACCCTTT+TGG	-	chr4_1:17295263-17295282	Msa0538160:CDS	40.0%
	AATTGGAGGAGGAATTGAGA+AGG	-	chr4_1:17295347-17295366	Msa0538160:intron	40.0%
	ATTGGAGGAGGAATTGAGAA+GGG	-	chr4_1:17295348-17295367	Msa0538160:intron	40.0%
	GATGTGCTTACTTCTTTCTC+AGG	+	chr4_1:17295472-17295491	None:intergenic	40.0%
!	GCCATCCTTGGAGTTTTTAA+TGG	+	chr4_1:17295758-17295777	None:intergenic	40.0%
!!!	GAACAGTTTTAAGCCATCCT+TGG	+	chr4_1:17295770-17295789	None:intergenic	40.0%
	AACTGGTTGAACCGTTTGTT+CGG	-	chr4_1:17295827-17295846	Msa0538160:CDS	40.0%
	TGAAGGATGGATATCATTGG+AGG	-	chr4_1:17295933-17295952	Msa0538160:intron	40.0%
	AAATCTTCGTAGTGCACGTT+TGG	+	chr4_1:17296315-17296334	None:intergenic	40.0%
!	GCTTGTTGCTACTTATGAAG+GGG	-	chr4_1:17296393-17296412	Msa0538160:intron	40.0%
!!	GATGTTGACTCAATTTGAGG+AGG	+	chr4_1:17296436-17296455	None:intergenic	40.0%
!!	CCAGATGTTGACTCAATTTG+AGG	+	chr4_1:17296439-17296458	None:intergenic	40.0%
	CCTCAAATTGAGTCAACATC+TGG	-	chr4_1:17296436-17296455	Msa0538160:intron	40.0%
!	ATTGAGTCAACATCTGGTTC+TGG	-	chr4_1:17296442-17296461	Msa0538160:intron	40.0%
!	GAGTCTAGTGTAACCACTTT+TGG	+	chr4_1:17296526-17296545	None:intergenic	40.0%
!!!	TTTTTGGGGCCAAAGTATCT+AGG	-	chr4_1:17296855-17296874	Msa0538160:five_prime_UTR	40.0%
	GAAGGAGACACATGACATGT+GGG	+	chr4_1:17294295-17294314	None:intergenic	45.0%
	GAAGAAGGAAAGTGAGTGGA+AGG	+	chr4_1:17294313-17294332	None:intergenic	45.0%
	TCAGTCCATCGATGAATTGG+AGG	-	chr4_1:17295333-17295352	Msa0538160:intron	45.0%
	TTCCTCCTCCAATTCATCGA+TGG	+	chr4_1:17295341-17295360	None:intergenic	45.0%
	ATTGGTGGAAATGCTCTCAG+TGG	-	chr4_1:17295390-17295409	Msa0538160:intron	45.0%
	TTCATCGGTAGAGCTACTCT+CGG	+	chr4_1:17295566-17295585	None:intergenic	45.0%
	AGGACTGAAGCTTCTGATAC+AGG	-	chr4_1:17295649-17295668	Msa0538160:CDS	45.0%
	TAATGGTTCGATGTCCGGTT+TGG	+	chr4_1:17295741-17295760	None:intergenic	45.0%
	TCTTGGACAAGGGTTATCTC+TGG	+	chr4_1:17295978-17295997	None:intergenic	45.0%
!	TTCTTTTTGACAGGGCAGCT+TGG	+	chr4_1:17296025-17296044	None:intergenic	45.0%
	AAGCTGCCCTGTCAAAAAGA+AGG	-	chr4_1:17296024-17296043	Msa0538160:intron	45.0%
	GACTCAATTTGAGGAGGTTG+AGG	+	chr4_1:17296430-17296449	None:intergenic	45.0%
	TGCAGCCATTTCAGGAAGAT+TGG	-	chr4_1:17296678-17296697	Msa0538160:CDS	45.0%
	GTGCACCAATCTTCCTGAAA+TGG	+	chr4_1:17296686-17296705	None:intergenic	45.0%
	GGAAGGAGACACATGACATG+TGG	+	chr4_1:17294296-17294315	None:intergenic	50.0%
!	AGCAAAGTTGGTCATCCCCA+AGG	+	chr4_1:17294753-17294772	None:intergenic	50.0%
	GTCCATCGATGAATTGGAGG+AGG	-	chr4_1:17295336-17295355	Msa0538160:intron	50.0%
!!	ATGTTGGTTCACGGCTCAAC+TGG	-	chr4_1:17295810-17295829	Msa0538160:CDS	50.0%
	CCACAGTTCGGTACCTTGTT+CGG	-	chr4_1:17296477-17296496	Msa0538160:intron	50.0%
!!!	GTAACCACTTTTGGTGCTGC+TGG	+	chr4_1:17296517-17296536	None:intergenic	50.0%
!	GCACTTGTTGCAGCCATTTC+AGG	-	chr4_1:17296670-17296689	Msa0538160:CDS	50.0%
	CCGAACTGTGGTTCACGCTA+CGG	+	chr4_1:17296468-17296487	None:intergenic	55.0%
	CCGTAGCGTGAACCACAGTT+CGG	-	chr4_1:17296465-17296484	Msa0538160:intron	55.0%
!!	CCGAACAAGGTACCGAACTG+TGG	+	chr4_1:17296480-17296499	None:intergenic	55.0%
!!!	CACTTTTGGTGCTGCTGGTG+AGG	+	chr4_1:17296512-17296531	None:intergenic	55.0%
	CTCACCAGCAGCACCAAAAG+TGG	-	chr4_1:17296510-17296529	Msa0538160:CDS	55.0%
!!	TGGTGCTGCTGGTGAGGTGA+GGG	+	chr4_1:17296506-17296525	None:intergenic	60.0%
!!	TTGGTGCTGCTGGTGAGGTG+AGG	+	chr4_1:17296507-17296526	None:intergenic	60.0%
	GAGGTGAGGGACGCCGAACA+AGG	+	chr4_1:17296493-17296512	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_1	gene	17294256	17297024	17294256	ID=Msa0538160;Name=Msa0538160
chr4_1	mRNA	17294256	17297024	17294256	ID=Msa0538160-mRNA-1;Parent=Msa0538160;Name=Msa0538160-mRNA-1;_AED=0.12;_eAED=0.12;_QI=283\|1\|1\|1\|1\|1\|5\|310\|314
chr4_1	exon	17294256	17294916	17294256	ID=Msa0538160-mRNA-1:exon:5188;Parent=Msa0538160-mRNA-1
chr4_1	exon	17295235	17295351	17295235	ID=Msa0538160-mRNA-1:exon:5187;Parent=Msa0538160-mRNA-1
chr4_1	exon	17295605	17295943	17295605	ID=Msa0538160-mRNA-1:exon:5186;Parent=Msa0538160-mRNA-1
chr4_1	exon	17296496	17296558	17296496	ID=Msa0538160-mRNA-1:exon:5185;Parent=Msa0538160-mRNA-1
chr4_1	exon	17296667	17297024	17296667	ID=Msa0538160-mRNA-1:exon:5184;Parent=Msa0538160-mRNA-1
chr4_1	five_prime_UTR	17296742	17297024	17296742	ID=Msa0538160-mRNA-1:five_prime_utr;Parent=Msa0538160-mRNA-1
chr4_1	CDS	17296667	17296741	17296667	ID=Msa0538160-mRNA-1:cds;Parent=Msa0538160-mRNA-1
chr4_1	CDS	17296496	17296558	17296496	ID=Msa0538160-mRNA-1:cds;Parent=Msa0538160-mRNA-1
chr4_1	CDS	17295605	17295943	17295605	ID=Msa0538160-mRNA-1:cds;Parent=Msa0538160-mRNA-1
chr4_1	CDS	17295235	17295351	17295235	ID=Msa0538160-mRNA-1:cds;Parent=Msa0538160-mRNA-1
chr4_1	CDS	17294566	17294916	17294566	ID=Msa0538160-mRNA-1:cds;Parent=Msa0538160-mRNA-1
chr4_1	three_prime_UTR	17294256	17294565	17294256	ID=Msa0538160-mRNA-1:three_prime_utr;Parent=Msa0538160-mRNA-1

Gene Sequence

>Msa0538160

ATGGATTGTTCATCATATATCAACACTTCCTTGGATCTCAACATTATTCCCTATAGAGCTCATGAAGAAGTTCCTAAGAAAGAGGTGGAAAGCAACTTTTTCTCCTTGGGGATGACCAACTTTGCTGTGAAAGATGAGTCCATCGATGAATTGGAGGAGGAATTGAGAAGGGTAACCTTAGAAAACAAGAAATTGGTGGAAATGCTCTCAGTGGTTTGTGAGAATTACAACACTTTGAGAAGTCATTTGATGGAATACATGAAGAGAAATCCTGAGAAAGAAGTAAGCACATCATCAAAGAAAAGGAAATCTGAAAGCAGCAATAATAACAATAGTAATTTGATTGGAATTAACAATGGAAATTCCGAGAGTAGCTCTACCGATGAAGAATCGTGTAAGAAACCAAGGGAAGAAGAAAATATTAAAGCCAAAATTTCAAGAGCTTATGTTAGGACTGAAGCTTCTGATACAGGCCTTATTGTGAAGGATGGATATCATTGGAGGAAATATGGACAAAAAGTAACCAGAGATAACCCTTGTCCAAGAGCTTATTTCAAATGCTCTTTTGCTCCAAGCTGCCCTGTCAAAAAGAAGGTGCAAAGAAGTGTAGATGATCAATCCATGCTTGTTGCTACTTATGAAGGGGAGCACAATCATCCTCAACCTCCTCAAATTGAGTCAACATCTGGTTCTGGCCGTAGCGTGAACCACAGTTCGGTACCTTGTTCGGCGTCCCTCACCTCACCAGCAGCACCAAAAGTGGTTACACTAGACTCAACAACTTCTAAGAATAGTAAAGATTCCAAGAGTATTGAACCAAGAAAAGATTCACCTAAGGTACCAAAGAATTTGGTGGAACAAATGGCTACTTCATTGACAACTGATCCAAATTTTAGAGCAGCACTTGTTGCAGCCATTTCAGGAAGATTGGTGCACAATAATTAA

Protein sequence

>Msa0538160

MDCSSYINTSLDLNIIPYRAHEEVPKKEVESNFFSLGMTNFAVKDESIDELEEELRRVTLENKKLVEMLSVVCENYNTLRSHLMEYMKRNPEKEVSTSSKKRKSESSNNNNSNLIGINNGNSESSSTDEESCKKPREEENIKAKISRAYVRTEASDTGLIVKDGYHWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVDDQSMLVATYEGEHNHPQPPQIESTSGSGRSVNHSSVPCSASLTSPAAPKVVTLDSTTSKNSKDSKSIEPRKDSPKVPKNLVEQMATSLTTDPNFRAALVAAISGRLVHNN*