Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585910 | AEI83414.1 | 84.804 | 204 | 0 | 2 | 1 | 173 | 1 | 204 | 1.16e-114 | 338 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585910 | sp|Q9SAH7|WRK40_ARATH | 54.054 | 185 | 68 | 5 | 4 | 173 | 6 | 188 | 3.84e-53 | 174 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0585910 | TF | WRKY |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0194010 | Msa0585910 | 0.804830 | 1.789702e-49 | -8.615850e-47 |
| Msa0235880 | Msa0585910 | 0.802853 | 4.605372e-49 | -8.615850e-47 |
| Msa0284240 | Msa0585910 | 0.804710 | 1.895777e-49 | -8.615850e-47 |
| Msa0538160 | Msa0585910 | 0.895140 | 1.271687e-75 | -8.615850e-47 |
| Msa0585910 | Msa0625800 | 0.934620 | 3.045783e-96 | -8.615850e-47 |
| Msa0585910 | Msa0663520 | 0.881235 | 2.840265e-70 | -8.615850e-47 |
| Msa0585910 | Msa1034700 | 0.802391 | 5.735981e-49 | -8.615850e-47 |
| Msa0585910 | Msa1465180 | 0.802691 | 4.975113e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585910 | MtrunA17_Chr4g0001361 | 84.314 | 204 | 1 | 2 | 1 | 173 | 1 | 204 | 6.58e-118 | 336 |
| Msa0585910 | MtrunA17_Chr2g0333851 | 51.643 | 213 | 54 | 7 | 4 | 173 | 5 | 211 | 9.66e-56 | 178 |
| Msa0585910 | MtrunA17_Chr3g0136961 | 49.162 | 179 | 75 | 5 | 7 | 173 | 6 | 180 | 1.12e-44 | 149 |
| Msa0585910 | MtrunA17_Chr1g0150281 | 44.920 | 187 | 79 | 7 | 4 | 173 | 3 | 182 | 8.68e-38 | 130 |
| Msa0585910 | MtrunA17_Chr1g0150271 | 39.041 | 146 | 77 | 2 | 27 | 172 | 9 | 142 | 9.19e-24 | 94.0 |
| Msa0585910 | MtrunA17_Chr4g0075201 | 30.319 | 188 | 83 | 4 | 28 | 170 | 122 | 306 | 6.14e-22 | 91.7 |
| Msa0585910 | MtrunA17_Chr7g0270831 | 33.742 | 163 | 79 | 4 | 30 | 170 | 100 | 255 | 1.61e-21 | 90.1 |
| Msa0585910 | MtrunA17_Chr2g0288871 | 30.693 | 202 | 83 | 5 | 29 | 173 | 146 | 347 | 7.79e-19 | 82.8 |
| Msa0585910 | MtrunA17_Chr4g0025051 | 45.333 | 75 | 32 | 1 | 96 | 170 | 309 | 374 | 2.72e-17 | 78.6 |
| Msa0585910 | MtrunA17_Chr4g0051181 | 51.667 | 60 | 24 | 1 | 119 | 173 | 226 | 285 | 3.49e-17 | 78.2 |
| Msa0585910 | MtrunA17_Chr4g0060271 | 63.636 | 44 | 16 | 0 | 130 | 173 | 254 | 297 | 5.23e-17 | 77.4 |
| Msa0585910 | MtrunA17_Chr2g0302391 | 45.652 | 92 | 37 | 4 | 89 | 170 | 162 | 250 | 6.37e-17 | 77.0 |
| Msa0585910 | MtrunA17_Chr7g0216891 | 61.364 | 44 | 17 | 0 | 130 | 173 | 218 | 261 | 1.06e-16 | 76.6 |
| Msa0585910 | MtrunA17_Chr3g0099641 | 44.000 | 75 | 39 | 2 | 96 | 170 | 219 | 290 | 1.57e-16 | 76.3 |
| Msa0585910 | MtrunA17_Chr4g0025061 | 46.479 | 71 | 29 | 1 | 100 | 170 | 338 | 399 | 1.29e-14 | 70.9 |
| Msa0585910 | MtrunA17_Chr3g0101131 | 52.632 | 57 | 26 | 1 | 115 | 171 | 399 | 454 | 9.95e-14 | 68.2 |
| Msa0585910 | MtrunA17_Chr5g0445311 | 52.632 | 57 | 26 | 1 | 115 | 171 | 348 | 403 | 1.22e-13 | 67.8 |
| Msa0585910 | MtrunA17_Chr2g0322391 | 39.726 | 73 | 43 | 1 | 101 | 173 | 320 | 391 | 3.24e-13 | 66.6 |
| Msa0585910 | MtrunA17_Chr3g0106491 | 50.877 | 57 | 27 | 1 | 115 | 171 | 349 | 404 | 5.59e-13 | 65.9 |
| Msa0585910 | MtrunA17_Chr3g0106491 | 57.143 | 42 | 17 | 1 | 132 | 173 | 199 | 239 | 3.36e-11 | 60.8 |
| Msa0585910 | MtrunA17_Chr5g0419241 | 40.580 | 69 | 38 | 2 | 91 | 159 | 40 | 105 | 5.59e-13 | 62.0 |
| Msa0585910 | MtrunA17_Chr5g0432161 | 44.000 | 75 | 40 | 2 | 97 | 171 | 388 | 460 | 6.00e-13 | 65.9 |
| Msa0585910 | MtrunA17_Chr5g0432161 | 57.143 | 42 | 17 | 1 | 132 | 173 | 245 | 285 | 4.00e-11 | 60.5 |
| Msa0585910 | MtrunA17_Chr1g0188941 | 45.161 | 62 | 33 | 1 | 110 | 171 | 30 | 90 | 1.07e-12 | 61.6 |
| Msa0585910 | MtrunA17_Chr4g0004911 | 43.590 | 78 | 41 | 2 | 95 | 172 | 302 | 376 | 1.44e-12 | 64.7 |
| Msa0585910 | MtrunA17_Chr7g0263531 | 61.905 | 42 | 15 | 1 | 132 | 173 | 190 | 230 | 1.87e-12 | 64.3 |
| Msa0585910 | MtrunA17_Chr7g0263531 | 51.111 | 45 | 21 | 1 | 129 | 173 | 359 | 402 | 5.65e-11 | 60.1 |
| Msa0585910 | MtrunA17_Chr5g0447701 | 39.326 | 89 | 49 | 2 | 83 | 171 | 208 | 291 | 8.38e-12 | 62.4 |
| Msa0585910 | MtrunA17_Chr3g0079691 | 49.123 | 57 | 28 | 1 | 115 | 171 | 479 | 534 | 8.92e-12 | 62.4 |
| Msa0585910 | MtrunA17_Chr4g0024391 | 36.000 | 75 | 39 | 1 | 96 | 170 | 203 | 268 | 1.21e-11 | 62.0 |
| Msa0585910 | MtrunA17_Chr7g0249311 | 46.774 | 62 | 29 | 2 | 110 | 171 | 374 | 431 | 1.35e-11 | 62.0 |
| Msa0585910 | MtrunA17_Chr2g0294231 | 45.161 | 62 | 30 | 2 | 112 | 173 | 187 | 244 | 1.47e-11 | 61.6 |
| Msa0585910 | MtrunA17_Chr5g0418191 | 50.000 | 52 | 25 | 1 | 120 | 171 | 309 | 359 | 1.49e-11 | 61.6 |
| Msa0585910 | MtrunA17_Chr5g0418191 | 60.976 | 41 | 15 | 1 | 132 | 172 | 152 | 191 | 3.36e-11 | 60.8 |
| Msa0585910 | MtrunA17_Chr4g0042831 | 57.143 | 42 | 17 | 1 | 129 | 170 | 276 | 316 | 2.04e-11 | 61.2 |
| Msa0585910 | MtrunA17_Chr4g0074001 | 55.556 | 45 | 19 | 1 | 129 | 173 | 357 | 400 | 2.13e-11 | 61.2 |
| Msa0585910 | MtrunA17_Chr5g0401821 | 38.095 | 105 | 52 | 2 | 74 | 173 | 145 | 241 | 2.17e-11 | 60.8 |
| Msa0585910 | MtrunA17_Chr7g0270191 | 47.541 | 61 | 31 | 1 | 112 | 172 | 126 | 185 | 2.25e-11 | 60.8 |
| Msa0585910 | MtrunA17_Chr1g0150801 | 35.897 | 117 | 52 | 5 | 64 | 170 | 37 | 140 | 3.23e-11 | 58.5 |
| Msa0585910 | MtrunA17_Chr7g0249301 | 55.814 | 43 | 18 | 1 | 129 | 171 | 290 | 331 | 6.13e-11 | 59.7 |
| Msa0585910 | MtrunA17_Chr8g0386241 | 52.381 | 42 | 19 | 1 | 129 | 170 | 101 | 141 | 6.58e-11 | 58.2 |
| Msa0585910 | MtrunA17_Chr7g0243891 | 54.545 | 44 | 19 | 1 | 129 | 172 | 372 | 414 | 6.61e-11 | 60.1 |
| Msa0585910 | MtrunA17_Chr1g0194481 | 45.000 | 60 | 29 | 2 | 112 | 171 | 142 | 197 | 6.67e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585910 | AT1G80840.1 | 54.054 | 185 | 68 | 5 | 4 | 173 | 6 | 188 | 3.91e-54 | 174 |
| Msa0585910 | AT4G31800.1 | 43.578 | 218 | 78 | 4 | 1 | 173 | 1 | 218 | 2.84e-49 | 161 |
| Msa0585910 | AT4G31800.3 | 43.192 | 213 | 76 | 4 | 1 | 168 | 1 | 213 | 1.61e-46 | 152 |
| Msa0585910 | AT4G31800.2 | 45.098 | 153 | 58 | 3 | 47 | 173 | 1 | 153 | 1.44e-36 | 127 |
| Msa0585910 | AT2G25000.3 | 43.258 | 178 | 71 | 5 | 12 | 173 | 4 | 167 | 1.36e-34 | 122 |
| Msa0585910 | AT2G25000.2 | 45.570 | 158 | 58 | 4 | 30 | 173 | 2 | 145 | 1.66e-33 | 119 |
| Msa0585910 | AT2G25000.4 | 45.570 | 158 | 58 | 4 | 30 | 173 | 2 | 145 | 1.66e-33 | 119 |
| Msa0585910 | AT2G25000.1 | 45.570 | 158 | 58 | 4 | 30 | 173 | 45 | 188 | 5.71e-33 | 118 |
| Msa0585910 | AT1G62300.1 | 28.646 | 192 | 86 | 5 | 30 | 170 | 160 | 351 | 5.35e-21 | 89.4 |
| Msa0585910 | AT4G01720.1 | 29.444 | 180 | 91 | 4 | 27 | 170 | 99 | 278 | 2.39e-17 | 79.0 |
| Msa0585910 | AT5G15130.1 | 61.364 | 44 | 17 | 0 | 130 | 173 | 226 | 269 | 1.67e-16 | 76.6 |
| Msa0585910 | AT5G15130.2 | 61.364 | 44 | 17 | 0 | 130 | 173 | 184 | 227 | 1.82e-16 | 76.3 |
| Msa0585910 | AT4G04450.2 | 40.964 | 83 | 45 | 2 | 91 | 170 | 156 | 237 | 4.68e-16 | 75.1 |
| Msa0585910 | AT4G04450.1 | 40.964 | 83 | 45 | 2 | 91 | 170 | 250 | 331 | 7.05e-16 | 74.7 |
| Msa0585910 | AT1G68150.1 | 51.613 | 62 | 25 | 2 | 117 | 173 | 216 | 277 | 8.00e-16 | 74.3 |
| Msa0585910 | AT1G18860.1 | 63.415 | 41 | 15 | 0 | 130 | 170 | 238 | 278 | 2.37e-15 | 73.2 |
| Msa0585910 | AT5G07100.2 | 33.884 | 121 | 70 | 3 | 58 | 172 | 65 | 181 | 3.88e-15 | 70.5 |
| Msa0585910 | AT5G07100.4 | 33.884 | 121 | 70 | 3 | 58 | 172 | 65 | 181 | 3.88e-15 | 70.5 |
| Msa0585910 | AT5G07100.5 | 33.884 | 121 | 70 | 3 | 58 | 172 | 65 | 181 | 3.88e-15 | 70.5 |
| Msa0585910 | AT5G07100.3 | 33.884 | 121 | 70 | 3 | 58 | 172 | 65 | 181 | 3.88e-15 | 70.5 |
| Msa0585910 | AT5G07100.1 | 33.884 | 121 | 70 | 3 | 58 | 172 | 158 | 274 | 7.05e-15 | 71.2 |
| Msa0585910 | AT4G22070.4 | 46.377 | 69 | 34 | 2 | 105 | 173 | 274 | 339 | 1.79e-13 | 67.8 |
| Msa0585910 | AT4G22070.3 | 46.377 | 69 | 34 | 2 | 105 | 173 | 274 | 339 | 1.79e-13 | 67.8 |
| Msa0585910 | AT4G22070.2 | 46.377 | 69 | 34 | 2 | 105 | 173 | 274 | 339 | 1.79e-13 | 67.8 |
| Msa0585910 | AT4G22070.1 | 46.377 | 69 | 34 | 2 | 105 | 173 | 274 | 339 | 1.79e-13 | 67.8 |
| Msa0585910 | AT4G26640.5 | 52.632 | 57 | 26 | 1 | 115 | 171 | 189 | 244 | 2.59e-13 | 67.0 |
| Msa0585910 | AT4G26640.6 | 52.632 | 57 | 26 | 1 | 115 | 171 | 189 | 244 | 2.59e-13 | 67.0 |
| Msa0585910 | AT4G26640.4 | 52.632 | 57 | 26 | 1 | 115 | 171 | 189 | 244 | 2.59e-13 | 67.0 |
| Msa0585910 | AT4G26640.3 | 52.632 | 57 | 26 | 1 | 115 | 171 | 189 | 244 | 2.59e-13 | 67.0 |
| Msa0585910 | AT4G26640.7 | 52.632 | 57 | 26 | 1 | 115 | 171 | 325 | 380 | 2.73e-13 | 67.4 |
| Msa0585910 | AT4G26640.1 | 52.632 | 57 | 26 | 1 | 115 | 171 | 293 | 348 | 2.73e-13 | 67.0 |
| Msa0585910 | AT4G26640.2 | 52.632 | 57 | 26 | 1 | 115 | 171 | 365 | 420 | 2.86e-13 | 67.0 |
| Msa0585910 | AT1G69810.1 | 58.537 | 41 | 17 | 0 | 130 | 170 | 202 | 242 | 5.31e-13 | 66.2 |
| Msa0585910 | AT5G56270.1 | 48.387 | 62 | 31 | 1 | 110 | 171 | 466 | 526 | 6.43e-13 | 66.2 |
| Msa0585910 | AT5G56270.1 | 33.846 | 130 | 82 | 2 | 42 | 171 | 187 | 312 | 2.46e-11 | 61.6 |
| Msa0585910 | AT1G69810.2 | 58.537 | 41 | 17 | 0 | 130 | 170 | 144 | 184 | 8.45e-13 | 65.5 |
| Msa0585910 | AT2G04880.2 | 62.791 | 43 | 15 | 1 | 129 | 171 | 281 | 322 | 8.57e-13 | 65.9 |
| Msa0585910 | AT2G04880.1 | 62.791 | 43 | 15 | 1 | 129 | 171 | 305 | 346 | 8.97e-13 | 65.9 |
| Msa0585910 | AT2G37260.1 | 64.286 | 42 | 14 | 1 | 132 | 173 | 166 | 206 | 1.97e-12 | 64.7 |
| Msa0585910 | AT2G37260.2 | 64.286 | 42 | 14 | 1 | 132 | 173 | 84 | 124 | 2.05e-12 | 64.3 |
| Msa0585910 | AT2G37260.3 | 64.286 | 42 | 14 | 1 | 132 | 173 | 86 | 126 | 2.08e-12 | 64.3 |
| Msa0585910 | AT2G38470.1 | 42.466 | 73 | 41 | 1 | 99 | 171 | 330 | 401 | 2.16e-12 | 64.7 |
| Msa0585910 | AT2G38470.1 | 58.140 | 43 | 17 | 1 | 131 | 173 | 184 | 225 | 2.05e-11 | 61.6 |
| Msa0585910 | AT2G03340.1 | 61.905 | 42 | 15 | 1 | 132 | 173 | 251 | 291 | 5.95e-12 | 63.2 |
| Msa0585910 | AT2G03340.1 | 54.545 | 44 | 19 | 1 | 129 | 172 | 413 | 455 | 2.31e-11 | 61.6 |
| Msa0585910 | AT4G26440.1 | 46.875 | 64 | 33 | 1 | 110 | 173 | 351 | 413 | 6.77e-12 | 63.2 |
| Msa0585910 | AT1G13960.1 | 61.905 | 42 | 15 | 1 | 132 | 173 | 230 | 270 | 1.41e-11 | 62.4 |
| Msa0585910 | AT1G13960.1 | 54.545 | 44 | 19 | 1 | 129 | 172 | 407 | 449 | 1.61e-11 | 62.0 |
| Msa0585910 | AT1G13960.2 | 61.905 | 42 | 15 | 1 | 132 | 173 | 77 | 117 | 1.57e-11 | 62.0 |
| Msa0585910 | AT1G13960.2 | 54.545 | 44 | 19 | 1 | 129 | 172 | 254 | 296 | 1.84e-11 | 61.6 |
| Msa0585910 | AT5G13080.1 | 42.529 | 87 | 40 | 4 | 96 | 173 | 24 | 109 | 1.68e-11 | 59.3 |
| Msa0585910 | AT3G01080.2 | 40.000 | 70 | 38 | 2 | 102 | 171 | 318 | 383 | 2.59e-11 | 61.6 |
| Msa0585910 | AT3G01080.1 | 40.000 | 70 | 38 | 2 | 102 | 171 | 280 | 345 | 2.99e-11 | 61.2 |
| Msa0585910 | AT2G30250.1 | 45.312 | 64 | 34 | 1 | 109 | 172 | 306 | 368 | 5.87e-11 | 60.5 |
| Msa0585910 | AT1G55600.1 | 61.905 | 42 | 15 | 1 | 132 | 173 | 308 | 348 | 7.60e-11 | 60.1 |
| Msa0585910 | AT3G01970.1 | 56.522 | 46 | 19 | 1 | 125 | 170 | 59 | 103 | 8.13e-11 | 57.8 |
| Msa0585910 | AT2G24570.1 | 35.556 | 90 | 56 | 1 | 84 | 173 | 198 | 285 | 9.08e-11 | 59.7 |
Find 40 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATAAGCTCTTGAAATTT+TGG | 0.096984 | 4_2:-7021174 | None:intergenic |
| GGATATCATTGGAGGAAATA+TGG | 0.293100 | 4_2:+7021491 | Msa0585910:CDS |
| CACTTTGAGAAGTCATTTGA+TGG | 0.316280 | 4_2:+7020977 | Msa0585910:CDS |
| ATTTCAGTCCATCGATGAAT+TGG | 0.333220 | 4_2:+7020878 | Msa0585910:intron |
| AACCTTAGAAAACAAGAAAT+TGG | 0.335631 | 4_2:+7020920 | Msa0585910:CDS |
| AATAACAATAGTAATTTGAT+TGG | 0.348469 | 4_2:+7021071 | Msa0585910:CDS |
| AACTTCTTCATGAGCTCTAT+AGG | 0.350958 | 4_2:-7020134 | None:intergenic |
| GATGTGCTTACTTCTTTCTC+AGG | 0.378143 | 4_2:-7021017 | None:intergenic |
| ACTTCTTCATGAGCTCTATA+GGG | 0.416190 | 4_2:-7020133 | None:intergenic |
| ATCATATATCAACACTTCCT+TGG | 0.423806 | 4_2:+7020096 | Msa0585910:CDS |
| AAGATAAGAGAAGTGGCTTA+AGG | 0.436349 | 4_2:-7019971 | None:intergenic |
| GAGCATTTGAAATAAGCTCT+TGG | 0.448164 | 4_2:-7021542 | None:intergenic |
| TAAGCACATCATCAAAGAAA+AGG | 0.475073 | 4_2:+7021030 | Msa0585910:CDS |
| GAAGAAGGAAAGTGAGTGGA+AGG | 0.502244 | 4_2:-7019854 | None:intergenic |
| TTGAAATAAGCTCTTGGACA+AGG | 0.504759 | 4_2:-7021536 | None:intergenic |
| TTGGATTTATTTGGTAAACA+TGG | 0.518013 | 4_2:+7020066 | Msa0585910:exon |
| AATTTGATTGGAATTAACAA+TGG | 0.518843 | 4_2:+7021083 | Msa0585910:CDS |
| TTGTGAAGGATGGATATCAT+TGG | 0.540562 | 4_2:+7021480 | Msa0585910:CDS |
| TCTTGGACAAGGGTTATCTC+TGG | 0.540970 | 4_2:-7021525 | None:intergenic |
| AATTGGAGGAGGAATTGAGA+AGG | 0.543648 | 4_2:+7020895 | Msa0585910:CDS |
| TGAAATAAGCTCTTGGACAA+GGG | 0.544753 | 4_2:-7021535 | None:intergenic |
| AATATTAAAGATAAGAGAAG+TGG | 0.546755 | 4_2:-7019978 | None:intergenic |
| TCAGTCCATCGATGAATTGG+AGG | 0.547121 | 4_2:+7020881 | Msa0585910:intron |
| GGGAATAATGTTGAGATCCA+AGG | 0.551140 | 4_2:-7020113 | None:intergenic |
| TGAGAAACTCAAGTTGAAGA+AGG | 0.558196 | 4_2:-7019869 | None:intergenic |
| TTCCTCCTCCAATTCATCGA+TGG | 0.559559 | 4_2:-7020886 | None:intergenic |
| CTTAGAAAACAAGAAATTGG+TGG | 0.564034 | 4_2:+7020923 | Msa0585910:CDS |
| ATTGGAGGAGGAATTGAGAA+GGG | 0.565937 | 4_2:+7020896 | Msa0585910:CDS |
| TGAATTAATAAATAAGCAAG+TGG | 0.570016 | 4_2:+7019802 | Msa0585910:five_prime_UTR |
| GTCCATCGATGAATTGGAGG+AGG | 0.577129 | 4_2:+7020884 | Msa0585910:intron |
| TGAAGGATGGATATCATTGG+AGG | 0.578215 | 4_2:+7021483 | Msa0585910:CDS |
| TTTCTTACACGATTCTTCAT+CGG | 0.585904 | 4_2:-7021126 | None:intergenic |
| AAGAATCGTGTAAGAAACCA+AGG | 0.593473 | 4_2:+7021132 | Msa0585910:CDS |
| GGAAGGAGACACATGACATG+TGG | 0.613013 | 4_2:-7019837 | None:intergenic |
| AGTTGAAGAAGGAAAGTGAG+TGG | 0.615014 | 4_2:-7019858 | None:intergenic |
| TTCATCGGTAGAGCTACTCT+CGG | 0.622483 | 4_2:-7021111 | None:intergenic |
| GAATTAATAAATAAGCAAGT+GGG | 0.623957 | 4_2:+7019803 | Msa0585910:five_prime_UTR |
| GAAGGAGACACATGACATGT+GGG | 0.646136 | 4_2:-7019836 | None:intergenic |
| ATTGGTGGAAATGCTCTCAG+TGG | 0.691318 | 4_2:+7020938 | Msa0585910:CDS |
| AGAATCGTGTAAGAAACCAA+GGG | 0.696308 | 4_2:+7021133 | Msa0585910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGATTATTTATTTATTC+AGG | + | chr4_2:7021898-7021917 | Msa0585910:intron | 10.0% |
| !!! | TTTTGATTATTTATTTATTC+AGG | + | chr4_2:7021898-7021917 | Msa0585910:intron | 10.0% |
| !!! | ACAATATTTTTGGATTTATT+TGG | + | chr4_2:7020057-7020076 | Msa0585910:five_prime_UTR | 15.0% |
| !!! | ATATCAATTTTTATACTTAC+AGG | - | chr4_2:7020160-7020179 | None:intergenic | 15.0% |
| !! | ATCATCAATTATTAATTCAA+GGG | - | chr4_2:7020719-7020738 | None:intergenic | 15.0% |
| !! | AATCATCAATTATTAATTCA+AGG | - | chr4_2:7020720-7020739 | None:intergenic | 15.0% |
| !! | AATAACAATAGTAATTTGAT+TGG | + | chr4_2:7021071-7021090 | Msa0585910:CDS | 15.0% |
| !!! | ACAATATTTTTGGATTTATT+TGG | + | chr4_2:7020057-7020076 | Msa0585910:five_prime_UTR | 15.0% |
| !!! | ATATCAATTTTTATACTTAC+AGG | - | chr4_2:7020160-7020179 | None:intergenic | 15.0% |
| !! | ATCATCAATTATTAATTCAA+GGG | - | chr4_2:7020719-7020738 | None:intergenic | 15.0% |
| !! | AATCATCAATTATTAATTCA+AGG | - | chr4_2:7020720-7020739 | None:intergenic | 15.0% |
| !! | AATAACAATAGTAATTTGAT+TGG | + | chr4_2:7021071-7021090 | Msa0585910:CDS | 15.0% |
| !! | TGAATTAATAAATAAGCAAG+TGG | + | chr4_2:7019802-7019821 | Msa0585910:five_prime_UTR | 20.0% |
| !! | GAATTAATAAATAAGCAAGT+GGG | + | chr4_2:7019803-7019822 | Msa0585910:five_prime_UTR | 20.0% |
| !! | AATATTAAAGATAAGAGAAG+TGG | - | chr4_2:7019981-7020000 | None:intergenic | 20.0% |
| !! | AAATCCAAAAATATTGTTCA+AGG | - | chr4_2:7020054-7020073 | None:intergenic | 20.0% |
| !! | TGTTTATTTATAGAAGAAAG+AGG | + | chr4_2:7020245-7020264 | Msa0585910:intron | 20.0% |
| !! | AATAGAGAAATATACATAAG+TGG | - | chr4_2:7020403-7020422 | None:intergenic | 20.0% |
| !! | TAAACAAGTTATAGCTTATA+TGG | - | chr4_2:7020577-7020596 | None:intergenic | 20.0% |
| !!! | TTTTGTTTATTAGTCCATTA+TGG | + | chr4_2:7020791-7020810 | Msa0585910:intron | 20.0% |
| !!! | TTTTTACTTTTTAGCCAAAA+GGG | - | chr4_2:7020822-7020841 | None:intergenic | 20.0% |
| !! | AATTTGATTGGAATTAACAA+TGG | + | chr4_2:7021083-7021102 | Msa0585910:CDS | 20.0% |
| !!! | AAATTTGTTAAAGTCATGTT+TGG | - | chr4_2:7021651-7021670 | None:intergenic | 20.0% |
| !! | TGAATTAATAAATAAGCAAG+TGG | + | chr4_2:7019802-7019821 | Msa0585910:five_prime_UTR | 20.0% |
| !! | GAATTAATAAATAAGCAAGT+GGG | + | chr4_2:7019803-7019822 | Msa0585910:five_prime_UTR | 20.0% |
| !! | AATATTAAAGATAAGAGAAG+TGG | - | chr4_2:7019981-7020000 | None:intergenic | 20.0% |
| !! | AAATCCAAAAATATTGTTCA+AGG | - | chr4_2:7020054-7020073 | None:intergenic | 20.0% |
| !! | TGTTTATTTATAGAAGAAAG+AGG | + | chr4_2:7020245-7020264 | Msa0585910:intron | 20.0% |
| !! | AATAGAGAAATATACATAAG+TGG | - | chr4_2:7020403-7020422 | None:intergenic | 20.0% |
| !! | TAAACAAGTTATAGCTTATA+TGG | - | chr4_2:7020577-7020596 | None:intergenic | 20.0% |
| !!! | TTTTGTTTATTAGTCCATTA+TGG | + | chr4_2:7020791-7020810 | Msa0585910:intron | 20.0% |
| !!! | TTTTTACTTTTTAGCCAAAA+GGG | - | chr4_2:7020822-7020841 | None:intergenic | 20.0% |
| !! | AATTTGATTGGAATTAACAA+TGG | + | chr4_2:7021083-7021102 | Msa0585910:CDS | 20.0% |
| !!! | AAATTTGTTAAAGTCATGTT+TGG | - | chr4_2:7021651-7021670 | None:intergenic | 20.0% |
| !! | TTGACCTTGAACAATATTTT+TGG | + | chr4_2:7020047-7020066 | Msa0585910:five_prime_UTR | 25.0% |
| ! | TTGGATTTATTTGGTAAACA+TGG | + | chr4_2:7020066-7020085 | Msa0585910:exon | 25.0% |
| ! | TTATTTATAGAAGAAAGAGG+TGG | + | chr4_2:7020248-7020267 | Msa0585910:intron | 25.0% |
| !! | TTTGATACCATTAGTTTGAA+TGG | + | chr4_2:7020762-7020781 | Msa0585910:intron | 25.0% |
| ! | ATAATCACCATTCAAACTAA+TGG | - | chr4_2:7020772-7020791 | None:intergenic | 25.0% |
| !!! | GTTTTTACTTTTTAGCCAAA+AGG | - | chr4_2:7020823-7020842 | None:intergenic | 25.0% |
| ! | AACCTTAGAAAACAAGAAAT+TGG | + | chr4_2:7020920-7020939 | Msa0585910:CDS | 25.0% |
| !! | TTAATATTTTCTTCTTCCCT+TGG | - | chr4_2:7021152-7021171 | None:intergenic | 25.0% |
| !! | AACATAAGCTCTTGAAATTT+TGG | - | chr4_2:7021177-7021196 | None:intergenic | 25.0% |
| ! | AAATTTCAAGAGCTTATGTT+AGG | + | chr4_2:7021177-7021196 | Msa0585910:intron | 25.0% |
| ! | TGTAAGTTAAGTATCTTACA+AGG | - | chr4_2:7021223-7021242 | None:intergenic | 25.0% |
| !! | AACCAAAATTGTTTTCAGTT+CGG | - | chr4_2:7021347-7021366 | None:intergenic | 25.0% |
| !!! | TGTTTTAAAAACCGAACAAA+TGG | - | chr4_2:7021389-7021408 | None:intergenic | 25.0% |
| ! | ACTAAAGTTTGTATAAGTGT+TGG | + | chr4_2:7021420-7021439 | Msa0585910:intron | 25.0% |
| ! | AGCATTTGATAAACGTAATT+TGG | - | chr4_2:7021845-7021864 | None:intergenic | 25.0% |
| !! | TTGACCTTGAACAATATTTT+TGG | + | chr4_2:7020047-7020066 | Msa0585910:five_prime_UTR | 25.0% |
| ! | TTGGATTTATTTGGTAAACA+TGG | + | chr4_2:7020066-7020085 | Msa0585910:exon | 25.0% |
| ! | TTATTTATAGAAGAAAGAGG+TGG | + | chr4_2:7020248-7020267 | Msa0585910:intron | 25.0% |
| !! | TTTGATACCATTAGTTTGAA+TGG | + | chr4_2:7020762-7020781 | Msa0585910:intron | 25.0% |
| ! | ATAATCACCATTCAAACTAA+TGG | - | chr4_2:7020772-7020791 | None:intergenic | 25.0% |
| !!! | GTTTTTACTTTTTAGCCAAA+AGG | - | chr4_2:7020823-7020842 | None:intergenic | 25.0% |
| ! | AACCTTAGAAAACAAGAAAT+TGG | + | chr4_2:7020920-7020939 | Msa0585910:CDS | 25.0% |
| !! | TTAATATTTTCTTCTTCCCT+TGG | - | chr4_2:7021152-7021171 | None:intergenic | 25.0% |
| !! | AACATAAGCTCTTGAAATTT+TGG | - | chr4_2:7021177-7021196 | None:intergenic | 25.0% |
| ! | AAATTTCAAGAGCTTATGTT+AGG | + | chr4_2:7021177-7021196 | Msa0585910:intron | 25.0% |
| ! | TGTAAGTTAAGTATCTTACA+AGG | - | chr4_2:7021223-7021242 | None:intergenic | 25.0% |
| !! | AACCAAAATTGTTTTCAGTT+CGG | - | chr4_2:7021347-7021366 | None:intergenic | 25.0% |
| !!! | TGTTTTAAAAACCGAACAAA+TGG | - | chr4_2:7021389-7021408 | None:intergenic | 25.0% |
| ! | ACTAAAGTTTGTATAAGTGT+TGG | + | chr4_2:7021420-7021439 | Msa0585910:intron | 25.0% |
| ! | AGCATTTGATAAACGTAATT+TGG | - | chr4_2:7021845-7021864 | None:intergenic | 25.0% |
| ATCATATATCAACACTTCCT+TGG | + | chr4_2:7020096-7020115 | Msa0585910:CDS | 30.0% | |
| ! | ATGCTCTTGTTTGAAATGTT+TGG | + | chr4_2:7020200-7020219 | Msa0585910:intron | 30.0% |
| ATAGTGCATACTTCAACAAT+TGG | - | chr4_2:7020490-7020509 | None:intergenic | 30.0% | |
| CTTGTTTACATAAGCTATCT+TGG | + | chr4_2:7020589-7020608 | Msa0585910:intron | 30.0% | |
| GTCAGTAGATAAACTCAAAT+AGG | + | chr4_2:7020679-7020698 | Msa0585910:intron | 30.0% | |
| !!! | CACCAATTTCTTGTTTTCTA+AGG | - | chr4_2:7020925-7020944 | None:intergenic | 30.0% |
| CTTAGAAAACAAGAAATTGG+TGG | + | chr4_2:7020923-7020942 | Msa0585910:CDS | 30.0% | |
| TAAGCACATCATCAAAGAAA+AGG | + | chr4_2:7021030-7021049 | Msa0585910:CDS | 30.0% | |
| TTTCTTACACGATTCTTCAT+CGG | - | chr4_2:7021129-7021148 | None:intergenic | 30.0% | |
| !! | ATCGCTTTTGCGTATATTTA+GGG | - | chr4_2:7021256-7021275 | None:intergenic | 30.0% |
| !!! | CGATGTTTTAAAAACCAAAC+CGG | + | chr4_2:7021272-7021291 | Msa0585910:intron | 30.0% |
| ! | AACCGAACTGAAAACAATTT+TGG | + | chr4_2:7021342-7021361 | Msa0585910:intron | 30.0% |
| ATCATATATCAACACTTCCT+TGG | + | chr4_2:7020096-7020115 | Msa0585910:CDS | 30.0% | |
| ! | ATGCTCTTGTTTGAAATGTT+TGG | + | chr4_2:7020200-7020219 | Msa0585910:intron | 30.0% |
| ATAGTGCATACTTCAACAAT+TGG | - | chr4_2:7020490-7020509 | None:intergenic | 30.0% | |
| CTTGTTTACATAAGCTATCT+TGG | + | chr4_2:7020589-7020608 | Msa0585910:intron | 30.0% | |
| GTCAGTAGATAAACTCAAAT+AGG | + | chr4_2:7020679-7020698 | Msa0585910:intron | 30.0% | |
| !!! | CACCAATTTCTTGTTTTCTA+AGG | - | chr4_2:7020925-7020944 | None:intergenic | 30.0% |
| CTTAGAAAACAAGAAATTGG+TGG | + | chr4_2:7020923-7020942 | Msa0585910:CDS | 30.0% | |
| TAAGCACATCATCAAAGAAA+AGG | + | chr4_2:7021030-7021049 | Msa0585910:CDS | 30.0% | |
| TTTCTTACACGATTCTTCAT+CGG | - | chr4_2:7021129-7021148 | None:intergenic | 30.0% | |
| !! | ATCGCTTTTGCGTATATTTA+GGG | - | chr4_2:7021256-7021275 | None:intergenic | 30.0% |
| !!! | CGATGTTTTAAAAACCAAAC+CGG | + | chr4_2:7021272-7021291 | Msa0585910:intron | 30.0% |
| ! | AACCGAACTGAAAACAATTT+TGG | + | chr4_2:7021342-7021361 | Msa0585910:intron | 30.0% |
| !! | TGAGAAACTCAAGTTGAAGA+AGG | - | chr4_2:7019872-7019891 | None:intergenic | 35.0% |
| AAGATAAGAGAAGTGGCTTA+AGG | - | chr4_2:7019974-7019993 | None:intergenic | 35.0% | |
| ACTTCTTCATGAGCTCTATA+GGG | - | chr4_2:7020136-7020155 | None:intergenic | 35.0% | |
| AACTTCTTCATGAGCTCTAT+AGG | - | chr4_2:7020137-7020156 | None:intergenic | 35.0% | |
| !! | GAAAGCAACTTTTTCTCCTT+GGG | + | chr4_2:7020270-7020289 | Msa0585910:intron | 35.0% |
| !! | AAAGCAACTTTTTCTCCTTG+GGG | + | chr4_2:7020271-7020290 | Msa0585910:intron | 35.0% |
| AATTATGCGTATGCCATGTT+TGG | + | chr4_2:7020345-7020364 | Msa0585910:intron | 35.0% | |
| TTAAGCAGTCTATCCAAACA+TGG | - | chr4_2:7020361-7020380 | None:intergenic | 35.0% | |
| ATTTCAGTCCATCGATGAAT+TGG | + | chr4_2:7020878-7020897 | Msa0585910:intron | 35.0% | |
| ! | CACTTTGAGAAGTCATTTGA+TGG | + | chr4_2:7020977-7020996 | Msa0585910:CDS | 35.0% |
| AAGAATCGTGTAAGAAACCA+AGG | + | chr4_2:7021132-7021151 | Msa0585910:CDS | 35.0% | |
| AGAATCGTGTAAGAAACCAA+GGG | + | chr4_2:7021133-7021152 | Msa0585910:CDS | 35.0% | |
| !! | TCGCTTTTGCGTATATTTAG+GGG | - | chr4_2:7021255-7021274 | None:intergenic | 35.0% |
| !! | CATCGCTTTTGCGTATATTT+AGG | - | chr4_2:7021257-7021276 | None:intergenic | 35.0% |
| ! | GTTTTTAATGGTTCGATGTC+CGG | - | chr4_2:7021294-7021313 | None:intergenic | 35.0% |
| TCGAACCATTAAAAACTCCA+AGG | + | chr4_2:7021298-7021317 | Msa0585910:intron | 35.0% | |
| ACCATTAAAAACTCCAAGGA+TGG | + | chr4_2:7021302-7021321 | Msa0585910:intron | 35.0% | |
| AACTGGTTGAACCATTTGTT+CGG | + | chr4_2:7021375-7021394 | Msa0585910:intron | 35.0% | |
| ! | TCTGTGTTTTCAGATTGTGA+AGG | + | chr4_2:7021466-7021485 | Msa0585910:intron | 35.0% |
| ! | TGTTTTCAGATTGTGAAGGA+TGG | + | chr4_2:7021470-7021489 | Msa0585910:intron | 35.0% |
| TTGTGAAGGATGGATATCAT+TGG | + | chr4_2:7021480-7021499 | Msa0585910:CDS | 35.0% | |
| GGATATCATTGGAGGAAATA+TGG | + | chr4_2:7021491-7021510 | Msa0585910:CDS | 35.0% | |
| TGAAATAAGCTCTTGGACAA+GGG | - | chr4_2:7021538-7021557 | None:intergenic | 35.0% | |
| TTGAAATAAGCTCTTGGACA+AGG | - | chr4_2:7021539-7021558 | None:intergenic | 35.0% | |
| ! | GAGCATTTGAAATAAGCTCT+TGG | - | chr4_2:7021545-7021564 | None:intergenic | 35.0% |
| ! | GCTTTACCTTCTTTTTGACA+GGG | - | chr4_2:7021583-7021602 | None:intergenic | 35.0% |
| ! | AGCTTTACCTTCTTTTTGAC+AGG | - | chr4_2:7021584-7021603 | None:intergenic | 35.0% |
| !! | TGAGAAACTCAAGTTGAAGA+AGG | - | chr4_2:7019872-7019891 | None:intergenic | 35.0% |
| AAGATAAGAGAAGTGGCTTA+AGG | - | chr4_2:7019974-7019993 | None:intergenic | 35.0% | |
| ACTTCTTCATGAGCTCTATA+GGG | - | chr4_2:7020136-7020155 | None:intergenic | 35.0% | |
| AACTTCTTCATGAGCTCTAT+AGG | - | chr4_2:7020137-7020156 | None:intergenic | 35.0% | |
| !! | GAAAGCAACTTTTTCTCCTT+GGG | + | chr4_2:7020270-7020289 | Msa0585910:intron | 35.0% |
| !! | AAAGCAACTTTTTCTCCTTG+GGG | + | chr4_2:7020271-7020290 | Msa0585910:intron | 35.0% |
| AATTATGCGTATGCCATGTT+TGG | + | chr4_2:7020345-7020364 | Msa0585910:intron | 35.0% | |
| TTAAGCAGTCTATCCAAACA+TGG | - | chr4_2:7020361-7020380 | None:intergenic | 35.0% | |
| ATTTCAGTCCATCGATGAAT+TGG | + | chr4_2:7020878-7020897 | Msa0585910:intron | 35.0% | |
| ! | CACTTTGAGAAGTCATTTGA+TGG | + | chr4_2:7020977-7020996 | Msa0585910:CDS | 35.0% |
| AAGAATCGTGTAAGAAACCA+AGG | + | chr4_2:7021132-7021151 | Msa0585910:CDS | 35.0% | |
| AGAATCGTGTAAGAAACCAA+GGG | + | chr4_2:7021133-7021152 | Msa0585910:CDS | 35.0% | |
| !! | TCGCTTTTGCGTATATTTAG+GGG | - | chr4_2:7021255-7021274 | None:intergenic | 35.0% |
| !! | CATCGCTTTTGCGTATATTT+AGG | - | chr4_2:7021257-7021276 | None:intergenic | 35.0% |
| ! | GTTTTTAATGGTTCGATGTC+CGG | - | chr4_2:7021294-7021313 | None:intergenic | 35.0% |
| TCGAACCATTAAAAACTCCA+AGG | + | chr4_2:7021298-7021317 | Msa0585910:intron | 35.0% | |
| ACCATTAAAAACTCCAAGGA+TGG | + | chr4_2:7021302-7021321 | Msa0585910:intron | 35.0% | |
| AACTGGTTGAACCATTTGTT+CGG | + | chr4_2:7021375-7021394 | Msa0585910:intron | 35.0% | |
| ! | TCTGTGTTTTCAGATTGTGA+AGG | + | chr4_2:7021466-7021485 | Msa0585910:intron | 35.0% |
| ! | TGTTTTCAGATTGTGAAGGA+TGG | + | chr4_2:7021470-7021489 | Msa0585910:intron | 35.0% |
| TTGTGAAGGATGGATATCAT+TGG | + | chr4_2:7021480-7021499 | Msa0585910:CDS | 35.0% | |
| GGATATCATTGGAGGAAATA+TGG | + | chr4_2:7021491-7021510 | Msa0585910:CDS | 35.0% | |
| TGAAATAAGCTCTTGGACAA+GGG | - | chr4_2:7021538-7021557 | None:intergenic | 35.0% | |
| TTGAAATAAGCTCTTGGACA+AGG | - | chr4_2:7021539-7021558 | None:intergenic | 35.0% | |
| ! | GAGCATTTGAAATAAGCTCT+TGG | - | chr4_2:7021545-7021564 | None:intergenic | 35.0% |
| ! | GCTTTACCTTCTTTTTGACA+GGG | - | chr4_2:7021583-7021602 | None:intergenic | 35.0% |
| ! | AGCTTTACCTTCTTTTTGAC+AGG | - | chr4_2:7021584-7021603 | None:intergenic | 35.0% |
| AGTTGAAGAAGGAAAGTGAG+TGG | - | chr4_2:7019861-7019880 | None:intergenic | 40.0% | |
| GGGAATAATGTTGAGATCCA+AGG | - | chr4_2:7020116-7020135 | None:intergenic | 40.0% | |
| !! | GGAAAGCAACTTTTTCTCCT+TGG | + | chr4_2:7020269-7020288 | Msa0585910:intron | 40.0% |
| CTCATCTTTCACAGCAAAGT+TGG | - | chr4_2:7020301-7020320 | None:intergenic | 40.0% | |
| ! | CAACTTTGCTGTGAAAGATG+AGG | + | chr4_2:7020299-7020318 | Msa0585910:intron | 40.0% |
| CCAAAAGGGTCATTCCATAA+TGG | - | chr4_2:7020808-7020827 | None:intergenic | 40.0% | |
| ! | CCATTATGGAATGACCCTTT+TGG | + | chr4_2:7020805-7020824 | Msa0585910:intron | 40.0% |
| AATTGGAGGAGGAATTGAGA+AGG | + | chr4_2:7020895-7020914 | Msa0585910:CDS | 40.0% | |
| ATTGGAGGAGGAATTGAGAA+GGG | + | chr4_2:7020896-7020915 | Msa0585910:CDS | 40.0% | |
| GATGTGCTTACTTCTTTCTC+AGG | - | chr4_2:7021020-7021039 | None:intergenic | 40.0% | |
| ! | GCCATCCTTGGAGTTTTTAA+TGG | - | chr4_2:7021306-7021325 | None:intergenic | 40.0% |
| !!! | GAACAGTTTTAAGCCATCCT+TGG | - | chr4_2:7021318-7021337 | None:intergenic | 40.0% |
| !!! | ATTTTGGTTCACAGCTCAAC+TGG | + | chr4_2:7021358-7021377 | Msa0585910:intron | 40.0% |
| TGAAGGATGGATATCATTGG+AGG | + | chr4_2:7021483-7021502 | Msa0585910:CDS | 40.0% | |
| AAATCTTCGTAGTGCACGTT+TGG | - | chr4_2:7021871-7021890 | None:intergenic | 40.0% | |
| AGTTGAAGAAGGAAAGTGAG+TGG | - | chr4_2:7019861-7019880 | None:intergenic | 40.0% | |
| GGGAATAATGTTGAGATCCA+AGG | - | chr4_2:7020116-7020135 | None:intergenic | 40.0% | |
| !! | GGAAAGCAACTTTTTCTCCT+TGG | + | chr4_2:7020269-7020288 | Msa0585910:intron | 40.0% |
| CTCATCTTTCACAGCAAAGT+TGG | - | chr4_2:7020301-7020320 | None:intergenic | 40.0% | |
| ! | CAACTTTGCTGTGAAAGATG+AGG | + | chr4_2:7020299-7020318 | Msa0585910:intron | 40.0% |
| CCAAAAGGGTCATTCCATAA+TGG | - | chr4_2:7020808-7020827 | None:intergenic | 40.0% | |
| ! | CCATTATGGAATGACCCTTT+TGG | + | chr4_2:7020805-7020824 | Msa0585910:intron | 40.0% |
| AATTGGAGGAGGAATTGAGA+AGG | + | chr4_2:7020895-7020914 | Msa0585910:CDS | 40.0% | |
| ATTGGAGGAGGAATTGAGAA+GGG | + | chr4_2:7020896-7020915 | Msa0585910:CDS | 40.0% | |
| GATGTGCTTACTTCTTTCTC+AGG | - | chr4_2:7021020-7021039 | None:intergenic | 40.0% | |
| ! | GCCATCCTTGGAGTTTTTAA+TGG | - | chr4_2:7021306-7021325 | None:intergenic | 40.0% |
| !!! | GAACAGTTTTAAGCCATCCT+TGG | - | chr4_2:7021318-7021337 | None:intergenic | 40.0% |
| !!! | ATTTTGGTTCACAGCTCAAC+TGG | + | chr4_2:7021358-7021377 | Msa0585910:intron | 40.0% |
| TGAAGGATGGATATCATTGG+AGG | + | chr4_2:7021483-7021502 | Msa0585910:CDS | 40.0% | |
| AAATCTTCGTAGTGCACGTT+TGG | - | chr4_2:7021871-7021890 | None:intergenic | 40.0% | |
| GAAGGAGACACATGACATGT+GGG | - | chr4_2:7019839-7019858 | None:intergenic | 45.0% | |
| GAAGAAGGAAAGTGAGTGGA+AGG | - | chr4_2:7019857-7019876 | None:intergenic | 45.0% | |
| TCAGTCCATCGATGAATTGG+AGG | + | chr4_2:7020881-7020900 | Msa0585910:intron | 45.0% | |
| TTCCTCCTCCAATTCATCGA+TGG | - | chr4_2:7020889-7020908 | None:intergenic | 45.0% | |
| ATTGGTGGAAATGCTCTCAG+TGG | + | chr4_2:7020938-7020957 | Msa0585910:CDS | 45.0% | |
| TTCATCGGTAGAGCTACTCT+CGG | - | chr4_2:7021114-7021133 | None:intergenic | 45.0% | |
| AGGACTGAAGCTTCTGATAC+AGG | + | chr4_2:7021197-7021216 | Msa0585910:intron | 45.0% | |
| TAATGGTTCGATGTCCGGTT+TGG | - | chr4_2:7021289-7021308 | None:intergenic | 45.0% | |
| TCTTGGACAAGGGTTATCTC+TGG | - | chr4_2:7021528-7021547 | None:intergenic | 45.0% | |
| ! | TTCTTTTTGACAGGGCAGCT+TGG | - | chr4_2:7021575-7021594 | None:intergenic | 45.0% |
| AAGCTGCCCTGTCAAAAAGA+AGG | + | chr4_2:7021574-7021593 | Msa0585910:CDS | 45.0% | |
| GAAGGAGACACATGACATGT+GGG | - | chr4_2:7019839-7019858 | None:intergenic | 45.0% | |
| GAAGAAGGAAAGTGAGTGGA+AGG | - | chr4_2:7019857-7019876 | None:intergenic | 45.0% | |
| TCAGTCCATCGATGAATTGG+AGG | + | chr4_2:7020881-7020900 | Msa0585910:intron | 45.0% | |
| TTCCTCCTCCAATTCATCGA+TGG | - | chr4_2:7020889-7020908 | None:intergenic | 45.0% | |
| ATTGGTGGAAATGCTCTCAG+TGG | + | chr4_2:7020938-7020957 | Msa0585910:CDS | 45.0% | |
| TTCATCGGTAGAGCTACTCT+CGG | - | chr4_2:7021114-7021133 | None:intergenic | 45.0% | |
| AGGACTGAAGCTTCTGATAC+AGG | + | chr4_2:7021197-7021216 | Msa0585910:intron | 45.0% | |
| TAATGGTTCGATGTCCGGTT+TGG | - | chr4_2:7021289-7021308 | None:intergenic | 45.0% | |
| TCTTGGACAAGGGTTATCTC+TGG | - | chr4_2:7021528-7021547 | None:intergenic | 45.0% | |
| ! | TTCTTTTTGACAGGGCAGCT+TGG | - | chr4_2:7021575-7021594 | None:intergenic | 45.0% |
| AAGCTGCCCTGTCAAAAAGA+AGG | + | chr4_2:7021574-7021593 | Msa0585910:CDS | 45.0% | |
| GGAAGGAGACACATGACATG+TGG | - | chr4_2:7019840-7019859 | None:intergenic | 50.0% | |
| ! | AGCAAAGTTGGTCATCCCCA+AGG | - | chr4_2:7020289-7020308 | None:intergenic | 50.0% |
| GTCCATCGATGAATTGGAGG+AGG | + | chr4_2:7020884-7020903 | Msa0585910:intron | 50.0% | |
| GGAAGGAGACACATGACATG+TGG | - | chr4_2:7019840-7019859 | None:intergenic | 50.0% | |
| ! | AGCAAAGTTGGTCATCCCCA+AGG | - | chr4_2:7020289-7020308 | None:intergenic | 50.0% |
| GTCCATCGATGAATTGGAGG+AGG | + | chr4_2:7020884-7020903 | Msa0585910:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 7019800 | 7021937 | 7019800 | ID=Msa0585910;Name=Msa0585910 |
| chr4_2 | mRNA | 7019800 | 7021937 | 7019800 | ID=Msa0585910-mRNA-1;Parent=Msa0585910;Name=Msa0585910-mRNA-1;_AED=0.17;_eAED=0.17;_QI=285|0.33|0.5|1|0.33|0.5|4|0|173 |
| chr4_2 | exon | 7019800 | 7020159 | 7019800 | ID=Msa0585910-mRNA-1:exon:1763;Parent=Msa0585910-mRNA-1 |
| chr4_2 | exon | 7020885 | 7021193 | 7020885 | ID=Msa0585910-mRNA-1:exon:1764;Parent=Msa0585910-mRNA-1 |
| chr4_2 | exon | 7021479 | 7021595 | 7021479 | ID=Msa0585910-mRNA-1:exon:1765;Parent=Msa0585910-mRNA-1 |
| chr4_2 | exon | 7021920 | 7021937 | 7021920 | ID=Msa0585910-mRNA-1:exon:1766;Parent=Msa0585910-mRNA-1 |
| chr4_2 | five_prime_UTR | 7019800 | 7020084 | 7019800 | ID=Msa0585910-mRNA-1:five_prime_utr;Parent=Msa0585910-mRNA-1 |
| chr4_2 | CDS | 7020085 | 7020159 | 7020085 | ID=Msa0585910-mRNA-1:cds;Parent=Msa0585910-mRNA-1 |
| chr4_2 | CDS | 7020885 | 7021193 | 7020885 | ID=Msa0585910-mRNA-1:cds;Parent=Msa0585910-mRNA-1 |
| chr4_2 | CDS | 7021479 | 7021595 | 7021479 | ID=Msa0585910-mRNA-1:cds;Parent=Msa0585910-mRNA-1 |
| chr4_2 | CDS | 7021920 | 7021937 | 7021920 | ID=Msa0585910-mRNA-1:cds;Parent=Msa0585910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
