Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1114620 | XP_003625128.1 | 95.379 | 541 | 23 | 1 | 1 | 539 | 1 | 541 | 0.0 | 1070 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1114620 | sp|Q9SS43|MUC21_ARATH | 55.711 | 499 | 176 | 10 | 35 | 527 | 34 | 493 | 0.0 | 544 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1114620 | G7KTG8 | 95.379 | 541 | 23 | 1 | 1 | 539 | 1 | 541 | 0.0 | 1070 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011050 | Msa1114620 | 0.802628 | 5.125910e-49 | -8.615850e-47 |
| Msa0043850 | Msa1114620 | 0.837139 | 6.200921e-57 | -8.615850e-47 |
| Msa0048390 | Msa1114620 | 0.803206 | 3.894382e-49 | -8.615850e-47 |
| Msa0082050 | Msa1114620 | 0.803034 | 4.226462e-49 | -8.615850e-47 |
| Msa0090510 | Msa1114620 | 0.824365 | 8.397155e-54 | -8.615850e-47 |
| Msa0625800 | Msa1114620 | 0.828243 | 1.001685e-54 | -8.615850e-47 |
| Msa0758250 | Msa1114620 | 0.820993 | 5.113327e-53 | -8.615850e-47 |
| Msa0799620 | Msa1114620 | 0.821295 | 4.355523e-53 | -8.615850e-47 |
| Msa0837870 | Msa1114620 | 0.809187 | 2.142085e-50 | -8.615850e-47 |
| Msa0137980 | Msa1114620 | 0.827747 | 1.318802e-54 | -8.615850e-47 |
| Msa0183910 | Msa1114620 | 0.816469 | 5.443624e-52 | -8.615850e-47 |
| Msa1034390 | Msa1114620 | 0.897429 | 1.418899e-76 | -8.615850e-47 |
| Msa1034700 | Msa1114620 | 0.801420 | 9.080386e-49 | -8.615850e-47 |
| Msa1074140 | Msa1114620 | 0.903781 | 2.431242e-79 | -8.615850e-47 |
| Msa1114620 | Msa1159600 | 0.938054 | 1.265838e-98 | -8.615850e-47 |
| Msa0583670 | Msa1114620 | 0.801963 | 7.025322e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1114620 | MtrunA17_Chr7g0257291 | 95.379 | 541 | 23 | 1 | 1 | 539 | 1 | 541 | 0.0 | 1070 |
| Msa1114620 | MtrunA17_Chr5g0418341 | 35.601 | 441 | 226 | 7 | 97 | 531 | 17 | 405 | 4.95e-84 | 266 |
| Msa1114620 | MtrunA17_Chr8g0392591 | 34.988 | 423 | 223 | 8 | 106 | 524 | 148 | 522 | 9.01e-81 | 262 |
| Msa1114620 | MtrunA17_Chr5g0418331 | 36.702 | 376 | 198 | 8 | 161 | 531 | 30 | 370 | 9.98e-75 | 241 |
| Msa1114620 | MtrunA17_Chr5g0398231 | 29.679 | 374 | 169 | 9 | 109 | 477 | 33 | 317 | 4.65e-50 | 175 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1114620 | AT2G41640.1 | 57.707 | 532 | 178 | 6 | 1 | 529 | 1 | 488 | 0.0 | 622 |
| Msa1114620 | AT2G41640.2 | 58.269 | 520 | 170 | 6 | 1 | 517 | 1 | 476 | 0.0 | 611 |
| Msa1114620 | AT2G41640.3 | 63.889 | 432 | 115 | 3 | 99 | 529 | 4 | 395 | 0.0 | 582 |
| Msa1114620 | AT3G57380.1 | 56.147 | 545 | 180 | 10 | 6 | 538 | 3 | 500 | 0.0 | 578 |
| Msa1114620 | AT3G10320.1 | 55.711 | 499 | 176 | 10 | 35 | 527 | 34 | 493 | 0.0 | 544 |
| Msa1114620 | AT3G57380.2 | 60.789 | 431 | 123 | 6 | 115 | 538 | 1 | 392 | 0.0 | 525 |
| Msa1114620 | AT3G57380.3 | 60.789 | 431 | 123 | 6 | 115 | 538 | 1 | 392 | 0.0 | 525 |
| Msa1114620 | AT2G03370.1 | 35.730 | 445 | 221 | 8 | 97 | 533 | 64 | 451 | 1.29e-91 | 288 |
| Msa1114620 | AT2G03370.2 | 35.730 | 445 | 221 | 8 | 97 | 533 | 66 | 453 | 1.38e-91 | 288 |
| Msa1114620 | AT2G03360.2 | 35.360 | 444 | 226 | 8 | 97 | 533 | 65 | 454 | 1.98e-87 | 277 |
| Msa1114620 | AT2G03360.1 | 35.586 | 444 | 225 | 8 | 97 | 533 | 61 | 450 | 1.99e-87 | 277 |
| Msa1114620 | AT3G18180.1 | 30.930 | 430 | 232 | 9 | 101 | 524 | 93 | 463 | 2.93e-66 | 222 |
| Msa1114620 | AT3G18170.1 | 31.915 | 423 | 231 | 9 | 109 | 524 | 10 | 382 | 2.60e-64 | 214 |
| Msa1114620 | AT3G18170.2 | 31.915 | 423 | 231 | 9 | 109 | 524 | 161 | 533 | 3.13e-63 | 216 |
Find 95 sgRNAs with CRISPR-Local
Find 324 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTCTTGTTAATGCTTTC+AGG | 0.044050 | 7_3:-61473464 | None:intergenic |
| TAAGGTCTAATTTAACATTT+TGG | 0.163748 | 7_3:-61473520 | None:intergenic |
| CTAGAGACAATAACCAATTT+TGG | 0.203861 | 7_3:-61473083 | None:intergenic |
| ACTTGAATGAACACAGATTT+AGG | 0.221082 | 7_3:-61473293 | None:intergenic |
| TTGTTCCTCTTGGTACTAAT+TGG | 0.239064 | 7_3:+61473315 | Msa1114620:CDS |
| TGCACGAACGAAACCAAAAT+TGG | 0.247732 | 7_3:+61473070 | Msa1114620:CDS |
| TGTTGATTTCAGAAACCTTT+TGG | 0.250209 | 7_3:+61472911 | Msa1114620:CDS |
| GCTTATTCGCCTCGGATAAA+AGG | 0.255535 | 7_3:+61472939 | Msa1114620:CDS |
| TGAGAATTTGCTAGTGAAAA+TGG | 0.272170 | 7_3:+61473130 | Msa1114620:CDS |
| CTTATGAGTACACAGTTCTT+AGG | 0.273170 | 7_3:+61473570 | Msa1114620:CDS |
| GTGAAGGGTTTGTGAGGTTT+TGG | 0.285617 | 7_3:-61471289 | None:intergenic |
| AAGAGAAAAGACAATAGTTT+TGG | 0.286461 | 7_3:-61471437 | None:intergenic |
| GTGAAAATGGCAGAGGAAAT+TGG | 0.288444 | 7_3:+61473143 | Msa1114620:CDS |
| AAACCCTTCACCTTCCAAAA+TGG | 0.293776 | 7_3:+61471301 | Msa1114620:exon |
| CTTTCAGGGTCTCTCAAAAT+AGG | 0.299027 | 7_3:-61473449 | None:intergenic |
| GAATGGTGGATCACGAAATA+TGG | 0.319520 | 7_3:+61472741 | Msa1114620:CDS |
| ATGTTAAATTAGACCTTAGA+AGG | 0.322345 | 7_3:+61473525 | Msa1114620:CDS |
| TTCAAACCAAGCTTCCTTGC+AGG | 0.322763 | 7_3:-61473362 | None:intergenic |
| TTGAGACCAACAATGGCTTC+AGG | 0.331391 | 7_3:-61472834 | None:intergenic |
| GTCTCCCACTTACTAGTATA+GGG | 0.332417 | 7_3:-61472495 | None:intergenic |
| AATTAGACCTTAGAAGGTTC+AGG | 0.335913 | 7_3:+61473531 | Msa1114620:CDS |
| CTTTCTTGTTAATGCTTTCA+GGG | 0.346346 | 7_3:-61473463 | None:intergenic |
| TGTTCCTCTTGGTACTAATT+GGG | 0.362453 | 7_3:+61473316 | Msa1114620:CDS |
| TTCATTCAAGTTGTTCCTCT+TGG | 0.365056 | 7_3:+61473305 | Msa1114620:CDS |
| TGTTTCCCTGAAGCCATTGT+TGG | 0.377591 | 7_3:+61472828 | Msa1114620:CDS |
| TGTCTCCCACTTACTAGTAT+AGG | 0.385376 | 7_3:-61472496 | None:intergenic |
| TTCACAGTGGTTGGTGTTGA+AGG | 0.385507 | 7_3:-61473604 | None:intergenic |
| TTATCTTCGCTAAAATTAAT+CGG | 0.394156 | 7_3:-61472795 | None:intergenic |
| GCGAATAAGCTTTGTCCAAA+AGG | 0.394660 | 7_3:-61472926 | None:intergenic |
| ACGGTGGTGATGAACCATTT+TGG | 0.409686 | 7_3:-61471315 | None:intergenic |
| AGCCGTGGACTCCGCATTGA+TGG | 0.415036 | 7_3:+61472872 | Msa1114620:CDS |
| ACCTTAGAAGGTTCAGGAAA+AGG | 0.416677 | 7_3:+61473537 | Msa1114620:CDS |
| ACCACTTCTATCACAACATA+TGG | 0.435687 | 7_3:-61472304 | None:intergenic |
| ATATGCTCTTCAGTTTCTAC+TGG | 0.444078 | 7_3:+61471711 | Msa1114620:CDS |
| TGGGCTGCAGATACTTATTA+CGG | 0.445783 | 7_3:+61473335 | Msa1114620:CDS |
| GCCACAACAACAACGTTTCA+AGG | 0.446390 | 7_3:+61472409 | Msa1114620:CDS |
| ATTGAATCTCATTTCAAAGA+AGG | 0.447770 | 7_3:+61472542 | Msa1114620:CDS |
| GACGTTATGATTGGTGTTCA+TGG | 0.453758 | 7_3:+61473239 | Msa1114620:CDS |
| TGAGACCAACAATGGCTTCA+GGG | 0.454768 | 7_3:-61472833 | None:intergenic |
| GAGGTTTCTGATTCCGATGA+TGG | 0.458312 | 7_3:-61473029 | None:intergenic |
| TCTTCATCTTTGATATACTC+TGG | 0.459293 | 7_3:-61471359 | None:intergenic |
| TTCACAACATTTCAACAAGA+AGG | 0.461145 | 7_3:+61472692 | Msa1114620:CDS |
| GGAAGCTAGAAAGTGAGGTT+TGG | 0.464340 | 7_3:-61471268 | None:intergenic |
| GGCGAACCTGCAAGGAAGCT+TGG | 0.468064 | 7_3:+61473356 | Msa1114620:CDS |
| TTCTCGAATGGAGGCTACAC+TGG | 0.476480 | 7_3:+61472621 | Msa1114620:CDS |
| TCATATAAAGAGCTTTCCTT+AGG | 0.480215 | 7_3:-61473407 | None:intergenic |
| AATGAGATTCAATTCATCAA+TGG | 0.480428 | 7_3:-61472532 | None:intergenic |
| CATGTATATCAACACCATCT+TGG | 0.485415 | 7_3:-61471683 | None:intergenic |
| AAGCTTGGTTTGAAATACAT+TGG | 0.491787 | 7_3:+61473371 | Msa1114620:CDS |
| AATGAAAGCGACGTTATGAT+TGG | 0.497226 | 7_3:+61473230 | Msa1114620:CDS |
| CCTGAAAGCATTAACAAGAA+AGG | 0.500548 | 7_3:+61473464 | Msa1114620:CDS |
| AACATAGCAACAAGAGAGAA+AGG | 0.504395 | 7_3:-61471468 | None:intergenic |
| CTGAAAGCATTAACAAGAAA+GGG | 0.509340 | 7_3:+61473465 | Msa1114620:CDS |
| AATTTCTTGCACTCCTTGTG+AGG | 0.519149 | 7_3:-61473048 | None:intergenic |
| TGGCTATGAAATTCATCCTA+AGG | 0.521370 | 7_3:+61473391 | Msa1114620:CDS |
| AGGACTATTGAAGCTAGAAA+AGG | 0.521445 | 7_3:+61472429 | Msa1114620:CDS |
| TAAAGCCCTATACTAGTAAG+TGG | 0.524084 | 7_3:+61472490 | Msa1114620:CDS |
| TCCTTGAAACGTTGTTGTTG+TGG | 0.524363 | 7_3:-61472410 | None:intergenic |
| TTGGTTATTGTCTCTAGAAG+TGG | 0.526248 | 7_3:+61473089 | Msa1114620:CDS |
| TTCCATCAATGCGGAGTCCA+CGG | 0.533701 | 7_3:-61472874 | None:intergenic |
| TAGAAAAGGTGAAGATGAAG+AGG | 0.534977 | 7_3:+61472443 | Msa1114620:CDS |
| AGACGAGGAAAGAGAAGCAC+AGG | 0.538907 | 7_3:+61472971 | Msa1114620:CDS |
| TATATCAACACCATCTTGGT+TGG | 0.540099 | 7_3:-61471679 | None:intergenic |
| GTTGTAGAGGAAGATTGAAG+AGG | 0.546253 | 7_3:-61472379 | None:intergenic |
| GAAATTCAGATAGATGAGAA+AGG | 0.555067 | 7_3:-61472770 | None:intergenic |
| AATGTCTTTATCTCCATCAT+CGG | 0.555784 | 7_3:+61473016 | Msa1114620:CDS |
| TGGACAAAGCTTATTCGCCT+CGG | 0.561151 | 7_3:+61472931 | Msa1114620:CDS |
| ACATCACAACCTTGAACACT+AGG | 0.565753 | 7_3:-61472573 | None:intergenic |
| TGATACTTGAATATCATGAA+TGG | 0.565861 | 7_3:+61472724 | Msa1114620:CDS |
| TGGAAGGTGAAGGGTTTGTG+AGG | 0.572042 | 7_3:-61471295 | None:intergenic |
| TTTGCTAGTGAAAATGGCAG+AGG | 0.583094 | 7_3:+61473136 | Msa1114620:CDS |
| AACAAGAGAGAAAGGTGATG+AGG | 0.590096 | 7_3:-61471460 | None:intergenic |
| ATGGGAAAATTCACAGTGGT+TGG | 0.595256 | 7_3:-61473613 | None:intergenic |
| AAAGCATTAACAAGAAAGGG+TGG | 0.599234 | 7_3:+61473468 | Msa1114620:CDS |
| CTTATTACGGCGAACCTGCA+AGG | 0.602890 | 7_3:+61473348 | Msa1114620:CDS |
| AAGCATTAACAAGAAAGGGT+GGG | 0.613905 | 7_3:+61473469 | Msa1114620:CDS |
| AATTCATGATGAACTAGCCG+TGG | 0.615819 | 7_3:+61472857 | Msa1114620:CDS |
| GTGGACTCCGCATTGATGGA+AGG | 0.622255 | 7_3:+61472876 | Msa1114620:CDS |
| TAAGTGGGAGACAAGTGTCA+TGG | 0.623072 | 7_3:+61472506 | Msa1114620:CDS |
| GAAAATGATGCCAACCAAGA+TGG | 0.628586 | 7_3:+61471669 | Msa1114620:CDS |
| TACTTGAATATCATGAATGG+TGG | 0.629903 | 7_3:+61472727 | Msa1114620:CDS |
| TGTGGCTTATTGAGTTGTAG+AGG | 0.630051 | 7_3:-61472392 | None:intergenic |
| TTCTAAGTTGATGGTAACGG+TGG | 0.640364 | 7_3:-61471331 | None:intergenic |
| TCTGATATCTGTGTGATGAA+AGG | 0.641175 | 7_3:+61472333 | Msa1114620:CDS |
| TCTTCGCTAAAATTAATCGG+TGG | 0.642329 | 7_3:-61472792 | None:intergenic |
| AAAGCCCTATACTAGTAAGT+GGG | 0.644350 | 7_3:+61472491 | Msa1114620:CDS |
| ACCATATGTTGTGATAGAAG+TGG | 0.645949 | 7_3:+61472303 | Msa1114620:CDS |
| TGTTGTGAAGTGATGTACAA+AGG | 0.651312 | 7_3:-61472678 | None:intergenic |
| TTTGTTACCTTCCATCAATG+CGG | 0.659307 | 7_3:-61472883 | None:intergenic |
| GTGTATCACGAATTCAACGA+TGG | 0.678441 | 7_3:+61472648 | Msa1114620:CDS |
| AAAAGGACTAATTCAAGACG+AGG | 0.679852 | 7_3:+61472956 | Msa1114620:CDS |
| GCAGCCCAATTAGTACCAAG+AGG | 0.687233 | 7_3:-61473320 | None:intergenic |
| TCATCACACAGATATCAGAA+CGG | 0.725384 | 7_3:-61472329 | None:intergenic |
| TCGGAATCAGAAACCTCACA+AGG | 0.728070 | 7_3:+61473035 | Msa1114620:CDS |
| TGGAATGGGAAAATTCACAG+TGG | 0.794884 | 7_3:-61473617 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACATAAATTCATTATAA+TGG | + | chr7_3:61471964-61471983 | Msa1114620:intron | 10.0% |
| !! | AAAACATAAATTCATTATAA+TGG | + | chr7_3:61471964-61471983 | Msa1114620:intron | 10.0% |
| !! | AAAATAGATAAAGAAAAAGA+TGG | - | chr7_3:61471515-61471534 | None:intergenic | 15.0% |
| !!! | AATTTAAAGTTGAATTGTTT+GGG | - | chr7_3:61472157-61472176 | None:intergenic | 15.0% |
| !!! | TAATTTAAAGTTGAATTGTT+TGG | - | chr7_3:61472158-61472177 | None:intergenic | 15.0% |
| !! | AATGTTAAACAATTAGAATA+TGG | - | chr7_3:61472206-61472225 | None:intergenic | 15.0% |
| !! | AAAATAGATAAAGAAAAAGA+TGG | - | chr7_3:61471515-61471534 | None:intergenic | 15.0% |
| !!! | AATTTAAAGTTGAATTGTTT+GGG | - | chr7_3:61472157-61472176 | None:intergenic | 15.0% |
| !!! | TAATTTAAAGTTGAATTGTT+TGG | - | chr7_3:61472158-61472177 | None:intergenic | 15.0% |
| !! | AATGTTAAACAATTAGAATA+TGG | - | chr7_3:61472206-61472225 | None:intergenic | 15.0% |
| !!! | ATTCATTATAATGGTTTTCA+AGG | + | chr7_3:61471973-61471992 | Msa1114620:intron | 20.0% |
| !!! | TTCATTATAATGGTTTTCAA+GGG | + | chr7_3:61471974-61471993 | Msa1114620:intron | 20.0% |
| !! | AATTAAGTAATTTACCCAAA+TGG | + | chr7_3:61472173-61472192 | Msa1114620:intron | 20.0% |
| !! | AATATGGAAAATAACCATTT+GGG | - | chr7_3:61472190-61472209 | None:intergenic | 20.0% |
| !! | TTATCTTCGCTAAAATTAAT+CGG | - | chr7_3:61472798-61472817 | None:intergenic | 20.0% |
| !!! | TTAATTTTAGCGAAGATAAT+CGG | + | chr7_3:61472799-61472818 | Msa1114620:CDS | 20.0% |
| !!! | TAAGGTCTAATTTAACATTT+TGG | - | chr7_3:61473523-61473542 | None:intergenic | 20.0% |
| !!! | ATTCATTATAATGGTTTTCA+AGG | + | chr7_3:61471973-61471992 | Msa1114620:intron | 20.0% |
| !!! | TTCATTATAATGGTTTTCAA+GGG | + | chr7_3:61471974-61471993 | Msa1114620:intron | 20.0% |
| !! | AATTAAGTAATTTACCCAAA+TGG | + | chr7_3:61472173-61472192 | Msa1114620:intron | 20.0% |
| !! | AATATGGAAAATAACCATTT+GGG | - | chr7_3:61472190-61472209 | None:intergenic | 20.0% |
| !! | TTATCTTCGCTAAAATTAAT+CGG | - | chr7_3:61472798-61472817 | None:intergenic | 20.0% |
| !!! | TTAATTTTAGCGAAGATAAT+CGG | + | chr7_3:61472799-61472818 | Msa1114620:CDS | 20.0% |
| !!! | TAAGGTCTAATTTAACATTT+TGG | - | chr7_3:61473523-61473542 | None:intergenic | 20.0% |
| !! | AAGAGAAAAGACAATAGTTT+TGG | - | chr7_3:61471440-61471459 | None:intergenic | 25.0% |
| !!! | TGTTTTTTGTGTTAATCCAA+TGG | - | chr7_3:61471950-61471969 | None:intergenic | 25.0% |
| !!! | TCATTATAATGGTTTTCAAG+GGG | + | chr7_3:61471975-61471994 | Msa1114620:intron | 25.0% |
| ! | GAATATGGAAAATAACCATT+TGG | - | chr7_3:61472191-61472210 | None:intergenic | 25.0% |
| ! | AGTAGACAACAATATTTAAG+GGG | - | chr7_3:61472233-61472252 | None:intergenic | 25.0% |
| ! | GAGTAGACAACAATATTTAA+GGG | - | chr7_3:61472234-61472253 | None:intergenic | 25.0% |
| ! | AGAGTAGACAACAATATTTA+AGG | - | chr7_3:61472235-61472254 | None:intergenic | 25.0% |
| !! | TTTTACTTCCTTGATTATAC+AGG | + | chr7_3:61472279-61472298 | Msa1114620:intron | 25.0% |
| ! | AATGAGATTCAATTCATCAA+TGG | - | chr7_3:61472535-61472554 | None:intergenic | 25.0% |
| ! | ATTGAATCTCATTTCAAAGA+AGG | + | chr7_3:61472542-61472561 | Msa1114620:CDS | 25.0% |
| ! | TGATACTTGAATATCATGAA+TGG | + | chr7_3:61472724-61472743 | Msa1114620:CDS | 25.0% |
| ! | ATGTTAAATTAGACCTTAGA+AGG | + | chr7_3:61473525-61473544 | Msa1114620:CDS | 25.0% |
| !! | AAGAGAAAAGACAATAGTTT+TGG | - | chr7_3:61471440-61471459 | None:intergenic | 25.0% |
| !!! | TGTTTTTTGTGTTAATCCAA+TGG | - | chr7_3:61471950-61471969 | None:intergenic | 25.0% |
| !!! | TCATTATAATGGTTTTCAAG+GGG | + | chr7_3:61471975-61471994 | Msa1114620:intron | 25.0% |
| ! | GAATATGGAAAATAACCATT+TGG | - | chr7_3:61472191-61472210 | None:intergenic | 25.0% |
| ! | AGTAGACAACAATATTTAAG+GGG | - | chr7_3:61472233-61472252 | None:intergenic | 25.0% |
| ! | GAGTAGACAACAATATTTAA+GGG | - | chr7_3:61472234-61472253 | None:intergenic | 25.0% |
| ! | AGAGTAGACAACAATATTTA+AGG | - | chr7_3:61472235-61472254 | None:intergenic | 25.0% |
| !! | TTTTACTTCCTTGATTATAC+AGG | + | chr7_3:61472279-61472298 | Msa1114620:intron | 25.0% |
| ! | AATGAGATTCAATTCATCAA+TGG | - | chr7_3:61472535-61472554 | None:intergenic | 25.0% |
| ! | ATTGAATCTCATTTCAAAGA+AGG | + | chr7_3:61472542-61472561 | Msa1114620:CDS | 25.0% |
| ! | TGATACTTGAATATCATGAA+TGG | + | chr7_3:61472724-61472743 | Msa1114620:CDS | 25.0% |
| ! | ATGTTAAATTAGACCTTAGA+AGG | + | chr7_3:61473525-61473544 | Msa1114620:CDS | 25.0% |
| !!! | GTTTTCTAAGTTGATGGTAA+CGG | - | chr7_3:61471337-61471356 | None:intergenic | 30.0% |
| TCTTCATCTTTGATATACTC+TGG | - | chr7_3:61471362-61471381 | None:intergenic | 30.0% | |
| ATAAAGAAAAAGATGGTCCA+AGG | - | chr7_3:61471508-61471527 | None:intergenic | 30.0% | |
| AAATAGTAGAAGACAAACAG+AGG | - | chr7_3:61471600-61471619 | None:intergenic | 30.0% | |
| ! | CTTACCTTTTCAGATTCTTA+TGG | + | chr7_3:61471642-61471661 | Msa1114620:intron | 30.0% |
| ! | TCAGTTAGGAGTTCAATTTT+TGG | + | chr7_3:61471858-61471877 | Msa1114620:intron | 30.0% |
| TAAATCAGACCCTGATAATT+CGG | + | chr7_3:61472066-61472085 | Msa1114620:intron | 30.0% | |
| ATCATGGTTGAAACAATTCT+TGG | - | chr7_3:61472121-61472140 | None:intergenic | 30.0% | |
| GTAGACAACAATATTTAAGG+GGG | - | chr7_3:61472232-61472251 | None:intergenic | 30.0% | |
| ATATGGTTCCTGTATAATCA+AGG | - | chr7_3:61472290-61472309 | None:intergenic | 30.0% | |
| TTCACAACATTTCAACAAGA+AGG | + | chr7_3:61472692-61472711 | Msa1114620:CDS | 30.0% | |
| TACTTGAATATCATGAATGG+TGG | + | chr7_3:61472727-61472746 | Msa1114620:CDS | 30.0% | |
| GAAATTCAGATAGATGAGAA+AGG | - | chr7_3:61472773-61472792 | None:intergenic | 30.0% | |
| !!! | ATGAATTTTGAGACCAACAA+TGG | - | chr7_3:61472844-61472863 | None:intergenic | 30.0% |
| !!! | TGTTGATTTCAGAAACCTTT+TGG | + | chr7_3:61472911-61472930 | Msa1114620:CDS | 30.0% |
| AATGTCTTTATCTCCATCAT+CGG | + | chr7_3:61473016-61473035 | Msa1114620:CDS | 30.0% | |
| ! | CTAGAGACAATAACCAATTT+TGG | - | chr7_3:61473086-61473105 | None:intergenic | 30.0% |
| !! | TGAGAATTTGCTAGTGAAAA+TGG | + | chr7_3:61473130-61473149 | Msa1114620:CDS | 30.0% |
| ACCTCAAAAAACAACAGAAT+TGG | + | chr7_3:61473187-61473206 | Msa1114620:CDS | 30.0% | |
| ACTTGAATGAACACAGATTT+AGG | - | chr7_3:61473296-61473315 | None:intergenic | 30.0% | |
| ! | AAGCTTGGTTTGAAATACAT+TGG | + | chr7_3:61473371-61473390 | Msa1114620:CDS | 30.0% |
| TCATATAAAGAGCTTTCCTT+AGG | - | chr7_3:61473410-61473429 | None:intergenic | 30.0% | |
| CTTTCTTGTTAATGCTTTCA+GGG | - | chr7_3:61473466-61473485 | None:intergenic | 30.0% | |
| !! | CTGAAAGCATTAACAAGAAA+GGG | + | chr7_3:61473465-61473484 | Msa1114620:CDS | 30.0% |
| !!! | GTTTTCTAAGTTGATGGTAA+CGG | - | chr7_3:61471337-61471356 | None:intergenic | 30.0% |
| TCTTCATCTTTGATATACTC+TGG | - | chr7_3:61471362-61471381 | None:intergenic | 30.0% | |
| ATAAAGAAAAAGATGGTCCA+AGG | - | chr7_3:61471508-61471527 | None:intergenic | 30.0% | |
| AAATAGTAGAAGACAAACAG+AGG | - | chr7_3:61471600-61471619 | None:intergenic | 30.0% | |
| ! | CTTACCTTTTCAGATTCTTA+TGG | + | chr7_3:61471642-61471661 | Msa1114620:intron | 30.0% |
| ! | TCAGTTAGGAGTTCAATTTT+TGG | + | chr7_3:61471858-61471877 | Msa1114620:intron | 30.0% |
| TAAATCAGACCCTGATAATT+CGG | + | chr7_3:61472066-61472085 | Msa1114620:intron | 30.0% | |
| ATCATGGTTGAAACAATTCT+TGG | - | chr7_3:61472121-61472140 | None:intergenic | 30.0% | |
| GTAGACAACAATATTTAAGG+GGG | - | chr7_3:61472232-61472251 | None:intergenic | 30.0% | |
| ATATGGTTCCTGTATAATCA+AGG | - | chr7_3:61472290-61472309 | None:intergenic | 30.0% | |
| TTCACAACATTTCAACAAGA+AGG | + | chr7_3:61472692-61472711 | Msa1114620:CDS | 30.0% | |
| TACTTGAATATCATGAATGG+TGG | + | chr7_3:61472727-61472746 | Msa1114620:CDS | 30.0% | |
| GAAATTCAGATAGATGAGAA+AGG | - | chr7_3:61472773-61472792 | None:intergenic | 30.0% | |
| !!! | ATGAATTTTGAGACCAACAA+TGG | - | chr7_3:61472844-61472863 | None:intergenic | 30.0% |
| !!! | TGTTGATTTCAGAAACCTTT+TGG | + | chr7_3:61472911-61472930 | Msa1114620:CDS | 30.0% |
| AATGTCTTTATCTCCATCAT+CGG | + | chr7_3:61473016-61473035 | Msa1114620:CDS | 30.0% | |
| ! | CTAGAGACAATAACCAATTT+TGG | - | chr7_3:61473086-61473105 | None:intergenic | 30.0% |
| !! | TGAGAATTTGCTAGTGAAAA+TGG | + | chr7_3:61473130-61473149 | Msa1114620:CDS | 30.0% |
| ACCTCAAAAAACAACAGAAT+TGG | + | chr7_3:61473187-61473206 | Msa1114620:CDS | 30.0% | |
| ACTTGAATGAACACAGATTT+AGG | - | chr7_3:61473296-61473315 | None:intergenic | 30.0% | |
| ! | AAGCTTGGTTTGAAATACAT+TGG | + | chr7_3:61473371-61473390 | Msa1114620:CDS | 30.0% |
| TCATATAAAGAGCTTTCCTT+AGG | - | chr7_3:61473410-61473429 | None:intergenic | 30.0% | |
| CTTTCTTGTTAATGCTTTCA+GGG | - | chr7_3:61473466-61473485 | None:intergenic | 30.0% | |
| !! | CTGAAAGCATTAACAAGAAA+GGG | + | chr7_3:61473465-61473484 | Msa1114620:CDS | 30.0% |
| !! | CTGGTTGTTTTCTAAGTTGA+TGG | - | chr7_3:61471343-61471362 | None:intergenic | 35.0% |
| AACATAGCAACAAGAGAGAA+AGG | - | chr7_3:61471471-61471490 | None:intergenic | 35.0% | |
| ! | GTTTTTGCACCTTTTTTCCT+TGG | + | chr7_3:61471488-61471507 | Msa1114620:CDS | 35.0% |
| AAAGATGGTCCAAGGAAAAA+AGG | - | chr7_3:61471500-61471519 | None:intergenic | 35.0% | |
| CAGTAGTAGTTGAAGAAAGA+AGG | - | chr7_3:61471560-61471579 | None:intergenic | 35.0% | |
| AGGTCCATAAGAATCTGAAA+AGG | - | chr7_3:61471649-61471668 | None:intergenic | 35.0% | |
| TATATCAACACCATCTTGGT+TGG | - | chr7_3:61471682-61471701 | None:intergenic | 35.0% | |
| CATGTATATCAACACCATCT+TGG | - | chr7_3:61471686-61471705 | None:intergenic | 35.0% | |
| ATATGCTCTTCAGTTTCTAC+TGG | + | chr7_3:61471711-61471730 | Msa1114620:CDS | 35.0% | |
| TTCTCAGGATTACCTAACTT+CGG | + | chr7_3:61471897-61471916 | Msa1114620:intron | 35.0% | |
| AAGAAGCAAGGAAATTCCAA+GGG | - | chr7_3:61472006-61472025 | None:intergenic | 35.0% | |
| TAAGAAGCAAGGAAATTCCA+AGG | - | chr7_3:61472007-61472026 | None:intergenic | 35.0% | |
| ACTGATCACAAGAACTTCTA+AGG | - | chr7_3:61472032-61472051 | None:intergenic | 35.0% | |
| !! | CTTGTGATCAGTCTACTTTT+TGG | + | chr7_3:61472040-61472059 | Msa1114620:intron | 35.0% |
| ACCATATGTTGTGATAGAAG+TGG | + | chr7_3:61472303-61472322 | Msa1114620:CDS | 35.0% | |
| ACCACTTCTATCACAACATA+TGG | - | chr7_3:61472307-61472326 | None:intergenic | 35.0% | |
| TCATCACACAGATATCAGAA+CGG | - | chr7_3:61472332-61472351 | None:intergenic | 35.0% | |
| TCTGATATCTGTGTGATGAA+AGG | + | chr7_3:61472333-61472352 | Msa1114620:CDS | 35.0% | |
| AGGACTATTGAAGCTAGAAA+AGG | + | chr7_3:61472429-61472448 | Msa1114620:CDS | 35.0% | |
| TAGAAAAGGTGAAGATGAAG+AGG | + | chr7_3:61472443-61472462 | Msa1114620:CDS | 35.0% | |
| !! | AGGGCTTTATCTTTTCATGT+TGG | - | chr7_3:61472479-61472498 | None:intergenic | 35.0% |
| TAAAGCCCTATACTAGTAAG+TGG | + | chr7_3:61472490-61472509 | Msa1114620:CDS | 35.0% | |
| AAAGCCCTATACTAGTAAGT+GGG | + | chr7_3:61472491-61472510 | Msa1114620:CDS | 35.0% | |
| TGTTGTGAAGTGATGTACAA+AGG | - | chr7_3:61472681-61472700 | None:intergenic | 35.0% | |
| TCTTCGCTAAAATTAATCGG+TGG | - | chr7_3:61472795-61472814 | None:intergenic | 35.0% | |
| TTTGTTACCTTCCATCAATG+CGG | - | chr7_3:61472886-61472905 | None:intergenic | 35.0% | |
| ! | TGAATTAGTCCTTTTATCCG+AGG | - | chr7_3:61472951-61472970 | None:intergenic | 35.0% |
| AAAAGGACTAATTCAAGACG+AGG | + | chr7_3:61472956-61472975 | Msa1114620:CDS | 35.0% | |
| ! | TTGGTTATTGTCTCTAGAAG+TGG | + | chr7_3:61473089-61473108 | Msa1114620:CDS | 35.0% |
| !!! | GCCAATTCTGTTGTTTTTTG+AGG | - | chr7_3:61473191-61473210 | None:intergenic | 35.0% |
| AATGAAAGCGACGTTATGAT+TGG | + | chr7_3:61473230-61473249 | Msa1114620:CDS | 35.0% | |
| !! | TTCATTCAAGTTGTTCCTCT+TGG | + | chr7_3:61473305-61473324 | Msa1114620:CDS | 35.0% |
| TTGTTCCTCTTGGTACTAAT+TGG | + | chr7_3:61473315-61473334 | Msa1114620:CDS | 35.0% | |
| TGTTCCTCTTGGTACTAATT+GGG | + | chr7_3:61473316-61473335 | Msa1114620:CDS | 35.0% | |
| TGGCTATGAAATTCATCCTA+AGG | + | chr7_3:61473391-61473410 | Msa1114620:CDS | 35.0% | |
| CCTTTCTTGTTAATGCTTTC+AGG | - | chr7_3:61473467-61473486 | None:intergenic | 35.0% | |
| !! | CCTGAAAGCATTAACAAGAA+AGG | + | chr7_3:61473464-61473483 | Msa1114620:CDS | 35.0% |
| ! | AAAGCATTAACAAGAAAGGG+TGG | + | chr7_3:61473468-61473487 | Msa1114620:CDS | 35.0% |
| AAGCATTAACAAGAAAGGGT+GGG | + | chr7_3:61473469-61473488 | Msa1114620:CDS | 35.0% | |
| AATTAGACCTTAGAAGGTTC+AGG | + | chr7_3:61473531-61473550 | Msa1114620:CDS | 35.0% | |
| CTTATGAGTACACAGTTCTT+AGG | + | chr7_3:61473570-61473589 | Msa1114620:CDS | 35.0% | |
| !! | CTGGTTGTTTTCTAAGTTGA+TGG | - | chr7_3:61471343-61471362 | None:intergenic | 35.0% |
| AACATAGCAACAAGAGAGAA+AGG | - | chr7_3:61471471-61471490 | None:intergenic | 35.0% | |
| ! | GTTTTTGCACCTTTTTTCCT+TGG | + | chr7_3:61471488-61471507 | Msa1114620:CDS | 35.0% |
| AAAGATGGTCCAAGGAAAAA+AGG | - | chr7_3:61471500-61471519 | None:intergenic | 35.0% | |
| CAGTAGTAGTTGAAGAAAGA+AGG | - | chr7_3:61471560-61471579 | None:intergenic | 35.0% | |
| AGGTCCATAAGAATCTGAAA+AGG | - | chr7_3:61471649-61471668 | None:intergenic | 35.0% | |
| TATATCAACACCATCTTGGT+TGG | - | chr7_3:61471682-61471701 | None:intergenic | 35.0% | |
| CATGTATATCAACACCATCT+TGG | - | chr7_3:61471686-61471705 | None:intergenic | 35.0% | |
| ATATGCTCTTCAGTTTCTAC+TGG | + | chr7_3:61471711-61471730 | Msa1114620:CDS | 35.0% | |
| TTCTCAGGATTACCTAACTT+CGG | + | chr7_3:61471897-61471916 | Msa1114620:intron | 35.0% | |
| AAGAAGCAAGGAAATTCCAA+GGG | - | chr7_3:61472006-61472025 | None:intergenic | 35.0% | |
| TAAGAAGCAAGGAAATTCCA+AGG | - | chr7_3:61472007-61472026 | None:intergenic | 35.0% | |
| ACTGATCACAAGAACTTCTA+AGG | - | chr7_3:61472032-61472051 | None:intergenic | 35.0% | |
| !! | CTTGTGATCAGTCTACTTTT+TGG | + | chr7_3:61472040-61472059 | Msa1114620:intron | 35.0% |
| ACCATATGTTGTGATAGAAG+TGG | + | chr7_3:61472303-61472322 | Msa1114620:CDS | 35.0% | |
| ACCACTTCTATCACAACATA+TGG | - | chr7_3:61472307-61472326 | None:intergenic | 35.0% | |
| TCATCACACAGATATCAGAA+CGG | - | chr7_3:61472332-61472351 | None:intergenic | 35.0% | |
| TCTGATATCTGTGTGATGAA+AGG | + | chr7_3:61472333-61472352 | Msa1114620:CDS | 35.0% | |
| AGGACTATTGAAGCTAGAAA+AGG | + | chr7_3:61472429-61472448 | Msa1114620:CDS | 35.0% | |
| TAGAAAAGGTGAAGATGAAG+AGG | + | chr7_3:61472443-61472462 | Msa1114620:CDS | 35.0% | |
| !! | AGGGCTTTATCTTTTCATGT+TGG | - | chr7_3:61472479-61472498 | None:intergenic | 35.0% |
| TAAAGCCCTATACTAGTAAG+TGG | + | chr7_3:61472490-61472509 | Msa1114620:CDS | 35.0% | |
| AAAGCCCTATACTAGTAAGT+GGG | + | chr7_3:61472491-61472510 | Msa1114620:CDS | 35.0% | |
| TGTTGTGAAGTGATGTACAA+AGG | - | chr7_3:61472681-61472700 | None:intergenic | 35.0% | |
| TCTTCGCTAAAATTAATCGG+TGG | - | chr7_3:61472795-61472814 | None:intergenic | 35.0% | |
| TTTGTTACCTTCCATCAATG+CGG | - | chr7_3:61472886-61472905 | None:intergenic | 35.0% | |
| ! | TGAATTAGTCCTTTTATCCG+AGG | - | chr7_3:61472951-61472970 | None:intergenic | 35.0% |
| AAAAGGACTAATTCAAGACG+AGG | + | chr7_3:61472956-61472975 | Msa1114620:CDS | 35.0% | |
| ! | TTGGTTATTGTCTCTAGAAG+TGG | + | chr7_3:61473089-61473108 | Msa1114620:CDS | 35.0% |
| !!! | GCCAATTCTGTTGTTTTTTG+AGG | - | chr7_3:61473191-61473210 | None:intergenic | 35.0% |
| AATGAAAGCGACGTTATGAT+TGG | + | chr7_3:61473230-61473249 | Msa1114620:CDS | 35.0% | |
| !! | TTCATTCAAGTTGTTCCTCT+TGG | + | chr7_3:61473305-61473324 | Msa1114620:CDS | 35.0% |
| TTGTTCCTCTTGGTACTAAT+TGG | + | chr7_3:61473315-61473334 | Msa1114620:CDS | 35.0% | |
| TGTTCCTCTTGGTACTAATT+GGG | + | chr7_3:61473316-61473335 | Msa1114620:CDS | 35.0% | |
| TGGCTATGAAATTCATCCTA+AGG | + | chr7_3:61473391-61473410 | Msa1114620:CDS | 35.0% | |
| CCTTTCTTGTTAATGCTTTC+AGG | - | chr7_3:61473467-61473486 | None:intergenic | 35.0% | |
| !! | CCTGAAAGCATTAACAAGAA+AGG | + | chr7_3:61473464-61473483 | Msa1114620:CDS | 35.0% |
| ! | AAAGCATTAACAAGAAAGGG+TGG | + | chr7_3:61473468-61473487 | Msa1114620:CDS | 35.0% |
| AAGCATTAACAAGAAAGGGT+GGG | + | chr7_3:61473469-61473488 | Msa1114620:CDS | 35.0% | |
| AATTAGACCTTAGAAGGTTC+AGG | + | chr7_3:61473531-61473550 | Msa1114620:CDS | 35.0% | |
| CTTATGAGTACACAGTTCTT+AGG | + | chr7_3:61473570-61473589 | Msa1114620:CDS | 35.0% | |
| !!! | GTTTTGGAAGCTAGAAAGTG+AGG | - | chr7_3:61471276-61471295 | None:intergenic | 40.0% |
| AAACCCTTCACCTTCCAAAA+TGG | + | chr7_3:61471301-61471320 | Msa1114620:exon | 40.0% | |
| !! | GAACCATTTTGGAAGGTGAA+GGG | - | chr7_3:61471307-61471326 | None:intergenic | 40.0% |
| !! | TGAACCATTTTGGAAGGTGA+AGG | - | chr7_3:61471308-61471327 | None:intergenic | 40.0% |
| !! | TGGTGATGAACCATTTTGGA+AGG | - | chr7_3:61471314-61471333 | None:intergenic | 40.0% |
| !! | TTCTAAGTTGATGGTAACGG+TGG | - | chr7_3:61471334-61471353 | None:intergenic | 40.0% |
| AACAAGAGAGAAAGGTGATG+AGG | - | chr7_3:61471463-61471482 | None:intergenic | 40.0% | |
| ! | TCTTGGTTGGCATCATTTTC+AGG | - | chr7_3:61471669-61471688 | None:intergenic | 40.0% |
| GAAAATGATGCCAACCAAGA+TGG | + | chr7_3:61471669-61471688 | Msa1114620:CDS | 40.0% | |
| TAGCAACCACATAAACCAAG+TGG | + | chr7_3:61471823-61471842 | Msa1114620:intron | 40.0% | |
| AACCACATAAACCAAGTGGT+TGG | + | chr7_3:61471827-61471846 | Msa1114620:intron | 40.0% | |
| ACCACATAAACCAAGTGGTT+GGG | + | chr7_3:61471828-61471847 | Msa1114620:intron | 40.0% | |
| CAGATGATACTTACCTTCTC+AGG | + | chr7_3:61471882-61471901 | Msa1114620:intron | 40.0% | |
| GAAGTTAGGTAATCCTGAGA+AGG | - | chr7_3:61471898-61471917 | None:intergenic | 40.0% | |
| CAATGGTTCTTAAGCCAAAG+AGG | - | chr7_3:61471933-61471952 | None:intergenic | 40.0% | |
| ! | CTCTTTGGCTTAAGAACCAT+TGG | + | chr7_3:61471931-61471950 | Msa1114620:intron | 40.0% |
| !! | TTTTCAAGGGGTTTATCCCT+TGG | + | chr7_3:61471987-61472006 | Msa1114620:intron | 40.0% |
| !! | CTTCTAAGGCATAAGAAGCA+AGG | - | chr7_3:61472018-61472037 | None:intergenic | 40.0% |
| AGCCAAACTCCGAATTATCA+GGG | - | chr7_3:61472078-61472097 | None:intergenic | 40.0% | |
| GGGATAACGAGTTTGAATCA+TGG | - | chr7_3:61472137-61472156 | None:intergenic | 40.0% | |
| GTTGTAGAGGAAGATTGAAG+AGG | - | chr7_3:61472382-61472401 | None:intergenic | 40.0% | |
| ! | TGTGGCTTATTGAGTTGTAG+AGG | - | chr7_3:61472395-61472414 | None:intergenic | 40.0% |
| ! | TCCTTGAAACGTTGTTGTTG+TGG | - | chr7_3:61472413-61472432 | None:intergenic | 40.0% |
| GTCTCCCACTTACTAGTATA+GGG | - | chr7_3:61472498-61472517 | None:intergenic | 40.0% | |
| TGTCTCCCACTTACTAGTAT+AGG | - | chr7_3:61472499-61472518 | None:intergenic | 40.0% | |
| ACATCACAACCTTGAACACT+AGG | - | chr7_3:61472576-61472595 | None:intergenic | 40.0% | |
| GTGTATCACGAATTCAACGA+TGG | + | chr7_3:61472648-61472667 | Msa1114620:CDS | 40.0% | |
| !! | GAATGGTGGATCACGAAATA+TGG | + | chr7_3:61472741-61472760 | Msa1114620:CDS | 40.0% |
| AATTCATGATGAACTAGCCG+TGG | + | chr7_3:61472857-61472876 | Msa1114620:CDS | 40.0% | |
| ! | GCGAATAAGCTTTGTCCAAA+AGG | - | chr7_3:61472929-61472948 | None:intergenic | 40.0% |
| AATTTCTTGCACTCCTTGTG+AGG | - | chr7_3:61473051-61473070 | None:intergenic | 40.0% | |
| TGCACGAACGAAACCAAAAT+TGG | + | chr7_3:61473070-61473089 | Msa1114620:CDS | 40.0% | |
| TTTGCTAGTGAAAATGGCAG+AGG | + | chr7_3:61473136-61473155 | Msa1114620:CDS | 40.0% | |
| GTGAAAATGGCAGAGGAAAT+TGG | + | chr7_3:61473143-61473162 | Msa1114620:CDS | 40.0% | |
| !!! | GGCAGAGGAAATTGGTTTTA+AGG | + | chr7_3:61473151-61473170 | Msa1114620:CDS | 40.0% |
| ! | GACGTTATGATTGGTGTTCA+TGG | + | chr7_3:61473239-61473258 | Msa1114620:CDS | 40.0% |
| TGGGCTGCAGATACTTATTA+CGG | + | chr7_3:61473335-61473354 | Msa1114620:CDS | 40.0% | |
| CTTTCAGGGTCTCTCAAAAT+AGG | - | chr7_3:61473452-61473471 | None:intergenic | 40.0% | |
| ACCTTAGAAGGTTCAGGAAA+AGG | + | chr7_3:61473537-61473556 | Msa1114620:CDS | 40.0% | |
| ! | ACCTTTTCCTGAACCTTCTA+AGG | - | chr7_3:61473541-61473560 | None:intergenic | 40.0% |
| !!! | GTTTTGGAAGCTAGAAAGTG+AGG | - | chr7_3:61471276-61471295 | None:intergenic | 40.0% |
| AAACCCTTCACCTTCCAAAA+TGG | + | chr7_3:61471301-61471320 | Msa1114620:exon | 40.0% | |
| !! | GAACCATTTTGGAAGGTGAA+GGG | - | chr7_3:61471307-61471326 | None:intergenic | 40.0% |
| !! | TGAACCATTTTGGAAGGTGA+AGG | - | chr7_3:61471308-61471327 | None:intergenic | 40.0% |
| !! | TGGTGATGAACCATTTTGGA+AGG | - | chr7_3:61471314-61471333 | None:intergenic | 40.0% |
| !! | TTCTAAGTTGATGGTAACGG+TGG | - | chr7_3:61471334-61471353 | None:intergenic | 40.0% |
| AACAAGAGAGAAAGGTGATG+AGG | - | chr7_3:61471463-61471482 | None:intergenic | 40.0% | |
| ! | TCTTGGTTGGCATCATTTTC+AGG | - | chr7_3:61471669-61471688 | None:intergenic | 40.0% |
| GAAAATGATGCCAACCAAGA+TGG | + | chr7_3:61471669-61471688 | Msa1114620:CDS | 40.0% | |
| TAGCAACCACATAAACCAAG+TGG | + | chr7_3:61471823-61471842 | Msa1114620:intron | 40.0% | |
| AACCACATAAACCAAGTGGT+TGG | + | chr7_3:61471827-61471846 | Msa1114620:intron | 40.0% | |
| ACCACATAAACCAAGTGGTT+GGG | + | chr7_3:61471828-61471847 | Msa1114620:intron | 40.0% | |
| CAGATGATACTTACCTTCTC+AGG | + | chr7_3:61471882-61471901 | Msa1114620:intron | 40.0% | |
| GAAGTTAGGTAATCCTGAGA+AGG | - | chr7_3:61471898-61471917 | None:intergenic | 40.0% | |
| CAATGGTTCTTAAGCCAAAG+AGG | - | chr7_3:61471933-61471952 | None:intergenic | 40.0% | |
| ! | CTCTTTGGCTTAAGAACCAT+TGG | + | chr7_3:61471931-61471950 | Msa1114620:intron | 40.0% |
| !! | TTTTCAAGGGGTTTATCCCT+TGG | + | chr7_3:61471987-61472006 | Msa1114620:intron | 40.0% |
| !! | CTTCTAAGGCATAAGAAGCA+AGG | - | chr7_3:61472018-61472037 | None:intergenic | 40.0% |
| AGCCAAACTCCGAATTATCA+GGG | - | chr7_3:61472078-61472097 | None:intergenic | 40.0% | |
| GGGATAACGAGTTTGAATCA+TGG | - | chr7_3:61472137-61472156 | None:intergenic | 40.0% | |
| GTTGTAGAGGAAGATTGAAG+AGG | - | chr7_3:61472382-61472401 | None:intergenic | 40.0% | |
| ! | TGTGGCTTATTGAGTTGTAG+AGG | - | chr7_3:61472395-61472414 | None:intergenic | 40.0% |
| ! | TCCTTGAAACGTTGTTGTTG+TGG | - | chr7_3:61472413-61472432 | None:intergenic | 40.0% |
| GTCTCCCACTTACTAGTATA+GGG | - | chr7_3:61472498-61472517 | None:intergenic | 40.0% | |
| TGTCTCCCACTTACTAGTAT+AGG | - | chr7_3:61472499-61472518 | None:intergenic | 40.0% | |
| ACATCACAACCTTGAACACT+AGG | - | chr7_3:61472576-61472595 | None:intergenic | 40.0% | |
| GTGTATCACGAATTCAACGA+TGG | + | chr7_3:61472648-61472667 | Msa1114620:CDS | 40.0% | |
| !! | GAATGGTGGATCACGAAATA+TGG | + | chr7_3:61472741-61472760 | Msa1114620:CDS | 40.0% |
| AATTCATGATGAACTAGCCG+TGG | + | chr7_3:61472857-61472876 | Msa1114620:CDS | 40.0% | |
| ! | GCGAATAAGCTTTGTCCAAA+AGG | - | chr7_3:61472929-61472948 | None:intergenic | 40.0% |
| AATTTCTTGCACTCCTTGTG+AGG | - | chr7_3:61473051-61473070 | None:intergenic | 40.0% | |
| TGCACGAACGAAACCAAAAT+TGG | + | chr7_3:61473070-61473089 | Msa1114620:CDS | 40.0% | |
| TTTGCTAGTGAAAATGGCAG+AGG | + | chr7_3:61473136-61473155 | Msa1114620:CDS | 40.0% | |
| GTGAAAATGGCAGAGGAAAT+TGG | + | chr7_3:61473143-61473162 | Msa1114620:CDS | 40.0% | |
| !!! | GGCAGAGGAAATTGGTTTTA+AGG | + | chr7_3:61473151-61473170 | Msa1114620:CDS | 40.0% |
| ! | GACGTTATGATTGGTGTTCA+TGG | + | chr7_3:61473239-61473258 | Msa1114620:CDS | 40.0% |
| TGGGCTGCAGATACTTATTA+CGG | + | chr7_3:61473335-61473354 | Msa1114620:CDS | 40.0% | |
| CTTTCAGGGTCTCTCAAAAT+AGG | - | chr7_3:61473452-61473471 | None:intergenic | 40.0% | |
| ACCTTAGAAGGTTCAGGAAA+AGG | + | chr7_3:61473537-61473556 | Msa1114620:CDS | 40.0% | |
| ! | ACCTTTTCCTGAACCTTCTA+AGG | - | chr7_3:61473541-61473560 | None:intergenic | 40.0% |
| GGAAGCTAGAAAGTGAGGTT+TGG | - | chr7_3:61471271-61471290 | None:intergenic | 45.0% | |
| ! | GTGAAGGGTTTGTGAGGTTT+TGG | - | chr7_3:61471292-61471311 | None:intergenic | 45.0% |
| !! | ACGGTGGTGATGAACCATTT+TGG | - | chr7_3:61471318-61471337 | None:intergenic | 45.0% |
| TCCCAACCACTTGGTTTATG+TGG | - | chr7_3:61471832-61471851 | None:intergenic | 45.0% | |
| TGATTGTAGTCCCAACCACT+TGG | - | chr7_3:61471841-61471860 | None:intergenic | 45.0% | |
| GGTTGGGACTACAATCAGTT+AGG | + | chr7_3:61471844-61471863 | Msa1114620:intron | 45.0% | |
| ! | GGCTCTAGTAATCCGAAGTT+AGG | - | chr7_3:61471912-61471931 | None:intergenic | 45.0% |
| TCGGATTACTAGAGCCTCTT+TGG | + | chr7_3:61471916-61471935 | Msa1114620:intron | 45.0% | |
| GACCCTGATAATTCGGAGTT+TGG | + | chr7_3:61472073-61472092 | Msa1114620:intron | 45.0% | |
| CAGCCAAACTCCGAATTATC+AGG | - | chr7_3:61472079-61472098 | None:intergenic | 45.0% | |
| GCCACAACAACAACGTTTCA+AGG | + | chr7_3:61472409-61472428 | Msa1114620:CDS | 45.0% | |
| TAAGTGGGAGACAAGTGTCA+TGG | + | chr7_3:61472506-61472525 | Msa1114620:CDS | 45.0% | |
| CCATTCGAGAAAAACACTGC+TGG | - | chr7_3:61472612-61472631 | None:intergenic | 45.0% | |
| ! | CCAGCAGTGTTTTTCTCGAA+TGG | + | chr7_3:61472609-61472628 | Msa1114620:CDS | 45.0% |
| ! | GCAGTGTTTTTCTCGAATGG+AGG | + | chr7_3:61472612-61472631 | Msa1114620:CDS | 45.0% |
| TGTTTCCCTGAAGCCATTGT+TGG | + | chr7_3:61472828-61472847 | Msa1114620:CDS | 45.0% | |
| TGAGACCAACAATGGCTTCA+GGG | - | chr7_3:61472836-61472855 | None:intergenic | 45.0% | |
| TTGAGACCAACAATGGCTTC+AGG | - | chr7_3:61472837-61472856 | None:intergenic | 45.0% | |
| TGGACAAAGCTTATTCGCCT+CGG | + | chr7_3:61472931-61472950 | Msa1114620:CDS | 45.0% | |
| GCTTATTCGCCTCGGATAAA+AGG | + | chr7_3:61472939-61472958 | Msa1114620:CDS | 45.0% | |
| GAGGTTTCTGATTCCGATGA+TGG | - | chr7_3:61473032-61473051 | None:intergenic | 45.0% | |
| TCGGAATCAGAAACCTCACA+AGG | + | chr7_3:61473035-61473054 | Msa1114620:CDS | 45.0% | |
| TTCAAACCAAGCTTCCTTGC+AGG | - | chr7_3:61473365-61473384 | None:intergenic | 45.0% | |
| GGAAGCTAGAAAGTGAGGTT+TGG | - | chr7_3:61471271-61471290 | None:intergenic | 45.0% | |
| ! | GTGAAGGGTTTGTGAGGTTT+TGG | - | chr7_3:61471292-61471311 | None:intergenic | 45.0% |
| !! | ACGGTGGTGATGAACCATTT+TGG | - | chr7_3:61471318-61471337 | None:intergenic | 45.0% |
| TCCCAACCACTTGGTTTATG+TGG | - | chr7_3:61471832-61471851 | None:intergenic | 45.0% | |
| TGATTGTAGTCCCAACCACT+TGG | - | chr7_3:61471841-61471860 | None:intergenic | 45.0% | |
| GGTTGGGACTACAATCAGTT+AGG | + | chr7_3:61471844-61471863 | Msa1114620:intron | 45.0% | |
| ! | GGCTCTAGTAATCCGAAGTT+AGG | - | chr7_3:61471912-61471931 | None:intergenic | 45.0% |
| TCGGATTACTAGAGCCTCTT+TGG | + | chr7_3:61471916-61471935 | Msa1114620:intron | 45.0% | |
| GACCCTGATAATTCGGAGTT+TGG | + | chr7_3:61472073-61472092 | Msa1114620:intron | 45.0% | |
| CAGCCAAACTCCGAATTATC+AGG | - | chr7_3:61472079-61472098 | None:intergenic | 45.0% | |
| GCCACAACAACAACGTTTCA+AGG | + | chr7_3:61472409-61472428 | Msa1114620:CDS | 45.0% | |
| TAAGTGGGAGACAAGTGTCA+TGG | + | chr7_3:61472506-61472525 | Msa1114620:CDS | 45.0% | |
| CCATTCGAGAAAAACACTGC+TGG | - | chr7_3:61472612-61472631 | None:intergenic | 45.0% | |
| ! | CCAGCAGTGTTTTTCTCGAA+TGG | + | chr7_3:61472609-61472628 | Msa1114620:CDS | 45.0% |
| ! | GCAGTGTTTTTCTCGAATGG+AGG | + | chr7_3:61472612-61472631 | Msa1114620:CDS | 45.0% |
| TGTTTCCCTGAAGCCATTGT+TGG | + | chr7_3:61472828-61472847 | Msa1114620:CDS | 45.0% | |
| TGAGACCAACAATGGCTTCA+GGG | - | chr7_3:61472836-61472855 | None:intergenic | 45.0% | |
| TTGAGACCAACAATGGCTTC+AGG | - | chr7_3:61472837-61472856 | None:intergenic | 45.0% | |
| TGGACAAAGCTTATTCGCCT+CGG | + | chr7_3:61472931-61472950 | Msa1114620:CDS | 45.0% | |
| GCTTATTCGCCTCGGATAAA+AGG | + | chr7_3:61472939-61472958 | Msa1114620:CDS | 45.0% | |
| GAGGTTTCTGATTCCGATGA+TGG | - | chr7_3:61473032-61473051 | None:intergenic | 45.0% | |
| TCGGAATCAGAAACCTCACA+AGG | + | chr7_3:61473035-61473054 | Msa1114620:CDS | 45.0% | |
| TTCAAACCAAGCTTCCTTGC+AGG | - | chr7_3:61473365-61473384 | None:intergenic | 45.0% | |
| TGGAAGGTGAAGGGTTTGTG+AGG | - | chr7_3:61471298-61471317 | None:intergenic | 50.0% | |
| GCGAATTCGCCTAGTGTTCA+AGG | + | chr7_3:61472564-61472583 | Msa1114620:CDS | 50.0% | |
| TTCTCGAATGGAGGCTACAC+TGG | + | chr7_3:61472621-61472640 | Msa1114620:CDS | 50.0% | |
| TTCCATCAATGCGGAGTCCA+CGG | - | chr7_3:61472877-61472896 | None:intergenic | 50.0% | |
| ! | AGACGAGGAAAGAGAAGCAC+AGG | + | chr7_3:61472971-61472990 | Msa1114620:CDS | 50.0% |
| GCAGCCCAATTAGTACCAAG+AGG | - | chr7_3:61473323-61473342 | None:intergenic | 50.0% | |
| CTTATTACGGCGAACCTGCA+AGG | + | chr7_3:61473348-61473367 | Msa1114620:CDS | 50.0% | |
| TGGAAGGTGAAGGGTTTGTG+AGG | - | chr7_3:61471298-61471317 | None:intergenic | 50.0% | |
| GCGAATTCGCCTAGTGTTCA+AGG | + | chr7_3:61472564-61472583 | Msa1114620:CDS | 50.0% | |
| TTCTCGAATGGAGGCTACAC+TGG | + | chr7_3:61472621-61472640 | Msa1114620:CDS | 50.0% | |
| TTCCATCAATGCGGAGTCCA+CGG | - | chr7_3:61472877-61472896 | None:intergenic | 50.0% | |
| ! | AGACGAGGAAAGAGAAGCAC+AGG | + | chr7_3:61472971-61472990 | Msa1114620:CDS | 50.0% |
| GCAGCCCAATTAGTACCAAG+AGG | - | chr7_3:61473323-61473342 | None:intergenic | 50.0% | |
| CTTATTACGGCGAACCTGCA+AGG | + | chr7_3:61473348-61473367 | Msa1114620:CDS | 50.0% | |
| ! | GTGGACTCCGCATTGATGGA+AGG | + | chr7_3:61472876-61472895 | Msa1114620:CDS | 55.0% |
| ! | GTGGACTCCGCATTGATGGA+AGG | + | chr7_3:61472876-61472895 | Msa1114620:CDS | 55.0% |
| AGCCGTGGACTCCGCATTGA+TGG | + | chr7_3:61472872-61472891 | Msa1114620:CDS | 60.0% | |
| GGCGAACCTGCAAGGAAGCT+TGG | + | chr7_3:61473356-61473375 | Msa1114620:CDS | 60.0% | |
| AGCCGTGGACTCCGCATTGA+TGG | + | chr7_3:61472872-61472891 | Msa1114620:CDS | 60.0% | |
| GGCGAACCTGCAAGGAAGCT+TGG | + | chr7_3:61473356-61473375 | Msa1114620:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 61471252 | 61473625 | 61471252 | ID=Msa1114620;Name=Msa1114620 |
| chr7_3 | mRNA | 61471252 | 61473625 | 61471252 | ID=Msa1114620-mRNA-1;Parent=Msa1114620;Name=Msa1114620-mRNA-1;_AED=0.04;_eAED=0.04;_QI=68|1|0.66|1|1|1|3|0|539 |
| chr7_3 | exon | 61471252 | 61471536 | 61471252 | ID=Msa1114620-mRNA-1:exon:13948;Parent=Msa1114620-mRNA-1 |
| chr7_3 | exon | 61471655 | 61471732 | 61471655 | ID=Msa1114620-mRNA-1:exon:13949;Parent=Msa1114620-mRNA-1 |
| chr7_3 | exon | 61472301 | 61473625 | 61472301 | ID=Msa1114620-mRNA-1:exon:13950;Parent=Msa1114620-mRNA-1 |
| chr7_3 | five_prime_UTR | 61471252 | 61471319 | 61471252 | ID=Msa1114620-mRNA-1:five_prime_utr;Parent=Msa1114620-mRNA-1 |
| chr7_3 | CDS | 61471320 | 61471536 | 61471320 | ID=Msa1114620-mRNA-1:cds;Parent=Msa1114620-mRNA-1 |
| chr7_3 | CDS | 61471655 | 61471732 | 61471655 | ID=Msa1114620-mRNA-1:cds;Parent=Msa1114620-mRNA-1 |
| chr7_3 | CDS | 61472301 | 61473625 | 61472301 | ID=Msa1114620-mRNA-1:cds;Parent=Msa1114620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
