Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1325470 | XP_003628446.1 | 100.000 | 476 | 0 | 0 | 1 | 476 | 1 | 476 | 0.0 | 964 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1325470 | sp|Q54XK2|SC61A_DICDI | 73.276 | 464 | 123 | 1 | 4 | 467 | 2 | 464 | 0.0 | 723 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1325470 | A0A2K3N9A6 | 100.000 | 476 | 0 | 0 | 1 | 476 | 1 | 476 | 0.0 | 964 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0113920 | Msa1325470 | 0.830334 | 3.114608e-55 | -8.615850e-47 |
| Msa0616580 | Msa1325470 | 0.823199 | 1.575376e-53 | -8.615850e-47 |
| Msa0630500 | Msa1325470 | 0.814282 | 1.668148e-51 | -8.615850e-47 |
| Msa0656320 | Msa1325470 | 0.854718 | 1.021217e-61 | -8.615850e-47 |
| Msa0699910 | Msa1325470 | 0.813743 | 2.193474e-51 | -8.615850e-47 |
| Msa1325470 | Msa1371300 | 0.800013 | 1.758650e-48 | -8.615850e-47 |
| Msa0373550 | Msa1325470 | 0.803125 | 4.046091e-49 | -8.615850e-47 |
| Msa0463970 | Msa1325470 | 0.802550 | 5.318542e-49 | -8.615850e-47 |
| Msa0468660 | Msa1325470 | 0.819311 | 1.241605e-52 | -8.615850e-47 |
| Msa0474570 | Msa1325470 | 0.851145 | 1.073992e-60 | -8.615850e-47 |
| Msa1046140 | Msa1325470 | 0.809804 | 1.578492e-50 | -8.615850e-47 |
| Msa0967880 | Msa1325470 | 0.808848 | 2.530887e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1325470 | MtrunA17_Chr8g0359731 | 100.000 | 476 | 0 | 0 | 1 | 476 | 1 | 476 | 0.0 | 964 |
| Msa1325470 | MtrunA17_Chr8g0372551 | 99.580 | 476 | 2 | 0 | 1 | 476 | 1 | 476 | 0.0 | 962 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1325470 | AT2G34250.2 | 93.697 | 476 | 29 | 1 | 1 | 476 | 1 | 475 | 0.0 | 910 |
| Msa1325470 | AT2G34250.3 | 93.697 | 476 | 29 | 1 | 1 | 476 | 1 | 475 | 0.0 | 910 |
| Msa1325470 | AT2G34250.1 | 93.697 | 476 | 29 | 1 | 1 | 476 | 1 | 475 | 0.0 | 910 |
| Msa1325470 | AT1G29310.1 | 93.487 | 476 | 30 | 1 | 1 | 476 | 1 | 475 | 0.0 | 910 |
| Msa1325470 | AT1G29310.2 | 93.487 | 476 | 30 | 1 | 1 | 476 | 1 | 475 | 0.0 | 910 |
| Msa1325470 | AT1G78720.2 | 90.947 | 475 | 42 | 1 | 1 | 475 | 1 | 474 | 0.0 | 889 |
| Msa1325470 | AT1G78720.1 | 90.947 | 475 | 42 | 1 | 1 | 475 | 1 | 474 | 0.0 | 889 |
| Msa1325470 | AT1G78720.3 | 90.526 | 475 | 42 | 2 | 1 | 475 | 1 | 472 | 0.0 | 879 |
Find 174 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGTTGCCTATGTTCTTTC+TGG | 0.132994 | 8_4:-37674623 | Msa1325470:CDS |
| GTTCTTCCTTACTGTGTTAA+AGG | 0.148284 | 8_4:+37672701 | None:intergenic |
| CGGGCATTCTTTGACCTTAC+AGG | 0.191772 | 8_4:+37674103 | None:intergenic |
| AGCTCCCCGACCACTGTTAA+TGG | 0.203929 | 8_4:+37674300 | None:intergenic |
| ATTGAGAGAGATGAGAATTT+TGG | 0.224987 | 8_4:+37675854 | None:intergenic |
| GATGCAGTGAAAACATTATA+TGG | 0.228906 | 8_4:-37674342 | Msa1325470:intron |
| CTGTCCGCGGTCTGGACTTC+AGG | 0.246401 | 8_4:+37675079 | None:intergenic |
| TTCTAGATAGGATCTCCTTT+TGG | 0.265601 | 8_4:-37672179 | Msa1325470:three_prime_UTR |
| TTATCCCGCACCCACAGTTT+TGG | 0.266212 | 8_4:-37672747 | Msa1325470:three_prime_UTR |
| TACTTCCTCACTTTAGAAAA+AGG | 0.274495 | 8_4:+37672658 | None:intergenic |
| CAGGTTAAATTACTGTATTC+TGG | 0.279807 | 8_4:-37675160 | Msa1325470:five_prime_UTR |
| GCCAGCGAGCTTGGTTTCTT+TGG | 0.285931 | 8_4:-37672818 | Msa1325470:CDS |
| TTCATGGGTGCAATTGGTTC+CGG | 0.294173 | 8_4:-37672905 | Msa1325470:CDS |
| TATATGACCTTCTCTCTAAA+TGG | 0.301758 | 8_4:+37675049 | None:intergenic |
| GATCTTCTTGTGTGGCTCTT+TGG | 0.308895 | 8_4:-37672205 | Msa1325470:three_prime_UTR |
| TGGACTTGTAATGCAGCTTT+TGG | 0.309583 | 8_4:-37674867 | Msa1325470:CDS |
| ATTCCCACTGCTGCTGCATT+TGG | 0.313275 | 8_4:-37672965 | Msa1325470:CDS |
| CTTGGAAGTATATCACAATT+AGG | 0.332365 | 8_4:+37674143 | None:intergenic |
| TAATAATAATTACCAGATAT+TGG | 0.334766 | 8_4:+37674451 | None:intergenic |
| TATTCATTGCCACCAATATC+TGG | 0.338652 | 8_4:-37674463 | Msa1325470:intron |
| GACAGTATTGGCAGATTTCA+TGG | 0.346559 | 8_4:-37672921 | Msa1325470:CDS |
| TCACTGTTGGTGACGCAATC+GGG | 0.358234 | 8_4:-37672772 | Msa1325470:three_prime_UTR |
| AAGAGCAGACTGAAGAATAA+TGG | 0.359294 | 8_4:+37674030 | None:intergenic |
| TCATCATTGAACAAAATGTT+TGG | 0.362793 | 8_4:+37672111 | None:intergenic |
| GAGGTGTAAAACAGTTTGAT+TGG | 0.363102 | 8_4:+37674061 | None:intergenic |
| TCATGGGTGCAATTGGTTCC+GGG | 0.364241 | 8_4:-37672904 | Msa1325470:CDS |
| AAAGGCTATGGTTTGGGATC+TGG | 0.365013 | 8_4:-37674494 | Msa1325470:CDS |
| TTAGATGAGCTCCTTCAAAA+AGG | 0.368354 | 8_4:-37674512 | Msa1325470:CDS |
| TTAGAGTACTTCACTTAGTA+AGG | 0.377970 | 8_4:-37675120 | Msa1325470:CDS |
| GCTCTTTGGTAGTTCTAGAT+AGG | 0.387833 | 8_4:-37672191 | Msa1325470:three_prime_UTR |
| ACTCAAGTTAACATAGATCT+TGG | 0.388303 | 8_4:+37672144 | None:intergenic |
| TGTAGTCAGCTTCCTCTGTA+TGG | 0.391279 | 8_4:-37674995 | Msa1325470:CDS |
| TTCAAACCGTGGAACTGTTA+TGG | 0.394615 | 8_4:-37674918 | Msa1325470:CDS |
| GCAGATTTCATGGGTGCAAT+TGG | 0.395146 | 8_4:-37672911 | Msa1325470:CDS |
| TGTTACTGCAAGTAATATTC+CGG | 0.397434 | 8_4:+37672880 | None:intergenic |
| GCACTTTCCTGTCCGCGGTC+TGG | 0.401116 | 8_4:+37675071 | None:intergenic |
| ATTACTGTATTCTGGTAAGA+TGG | 0.401585 | 8_4:-37675152 | Msa1325470:exon |
| CCGACCACTGTTAATGGTTG+TGG | 0.403048 | 8_4:+37674306 | None:intergenic |
| CAACTTGCAGGAACAACAAA+TGG | 0.409211 | 8_4:-37673038 | Msa1325470:intron |
| TATGTTCTTTCTGGAATGTA+TGG | 0.413955 | 8_4:-37674614 | Msa1325470:CDS |
| CCCACTGCTGCTGCATTTGG+AGG | 0.416693 | 8_4:-37672962 | Msa1325470:CDS |
| GTGCCTTGTTCTCTAAAACT+TGG | 0.421361 | 8_4:-37673543 | Msa1325470:CDS |
| AATGGTAATGCCTGGTCATC+GGG | 0.426397 | 8_4:-37673020 | Msa1325470:CDS |
| ATCACTGTTGGTGACGCAAT+CGG | 0.428465 | 8_4:-37672773 | Msa1325470:three_prime_UTR |
| CAGACAAGGTTCGTGCCCTT+AGG | 0.428797 | 8_4:-37674228 | Msa1325470:CDS |
| AAAGAATGCCCGTGGACAGC+AGG | 0.432758 | 8_4:-37674092 | Msa1325470:CDS |
| AACATTTCAAATTGATGACT+TGG | 0.434063 | 8_4:-37672068 | Msa1325470:three_prime_UTR |
| TTTACAACGATATGCTACTT+TGG | 0.435426 | 8_4:+37672635 | None:intergenic |
| AAGGAAAGAGCCAGCGAGCT+TGG | 0.436512 | 8_4:-37672827 | Msa1325470:CDS |
| CTGGGAAATGAAGTAGAGAT+TGG | 0.437679 | 8_4:+37674003 | None:intergenic |
| AGAGCAGACTGAAGAATAAT+GGG | 0.438369 | 8_4:+37674031 | None:intergenic |
| ACCCTTTCTTCTATTTGAAT+CGG | 0.439300 | 8_4:-37675915 | Msa1325470:five_prime_UTR |
| TTGTGAATCTGTTGGGCAAA+TGG | 0.440455 | 8_4:-37673861 | Msa1325470:CDS |
| TGAAATCTGCCAATACTGTC+AGG | 0.442633 | 8_4:+37672924 | None:intergenic |
| GCTAGCAGATTTGTGACATT+GGG | 0.446952 | 8_4:+37674181 | None:intergenic |
| CGTGGAACTGTTATGGAGCT+TGG | 0.452315 | 8_4:-37674911 | Msa1325470:CDS |
| AGACAAGGTTCGTGCCCTTA+GGG | 0.456049 | 8_4:-37674227 | Msa1325470:CDS |
| AAAACTTGGATTGAAGTCTC+TGG | 0.456476 | 8_4:-37673529 | Msa1325470:CDS |
| CTTGGCATCTTGATAGCTGT+TGG | 0.461242 | 8_4:-37674650 | Msa1325470:CDS |
| GGTGCAATTGGTTCCGGGAC+CGG | 0.461353 | 8_4:-37672899 | Msa1325470:CDS |
| AAAAGAGCTGGAGGATGATA+AGG | 0.461663 | 8_4:+37674558 | None:intergenic |
| CAGGTGCAGATCCATTCTAT+TGG | 0.462335 | 8_4:-37674958 | Msa1325470:CDS |
| CACAACCATTAACAGTGGTC+GGG | 0.464038 | 8_4:-37674305 | Msa1325470:CDS |
| TTCCGATTCAAATAGAAGAA+AGG | 0.468653 | 8_4:+37675913 | None:intergenic |
| CCGAGCAGTTCCTTGATGAA+TGG | 0.471095 | 8_4:-37672021 | Msa1325470:three_prime_UTR |
| CGACCACTGTTAATGGTTGT+GGG | 0.480413 | 8_4:+37674307 | None:intergenic |
| TATGGAATACACTCGACAAC+AGG | 0.481173 | 8_4:-37674977 | Msa1325470:CDS |
| TAGTATGCAATGCCACCAAC+AGG | 0.483522 | 8_4:+37673805 | None:intergenic |
| TGGTCGGGGAGCTGAATTTG+AGG | 0.485535 | 8_4:-37674290 | Msa1325470:CDS |
| CTGTTCTAGTAATCAACAAA+TGG | 0.485839 | 8_4:+37674248 | None:intergenic |
| CAGCAGCAGTGGGAATATAT+CGG | 0.486111 | 8_4:+37672972 | None:intergenic |
| AAATGGAAGGAATCTGAGTA+TGG | 0.491085 | 8_4:-37673844 | Msa1325470:CDS |
| AGATGTTGCCAAGCAGTTGA+AGG | 0.492024 | 8_4:-37673494 | Msa1325470:intron |
| CACTGTTGGTGACGCAATCG+GGG | 0.494320 | 8_4:-37672771 | Msa1325470:three_prime_UTR |
| GCAAAACCACACGGAAACCT+TGG | 0.494750 | 8_4:+37674125 | None:intergenic |
| TCAGGAAGGAATGATAGAAA+TGG | 0.496257 | 8_4:+37675097 | None:intergenic |
| ACAAGTCCAGAAGTGACAAT+GGG | 0.498671 | 8_4:+37674881 | None:intergenic |
| AACTTCATTGTGAATCTGTT+GGG | 0.502266 | 8_4:-37673868 | Msa1325470:CDS |
| TCCGATTCAAATAGAAGAAA+GGG | 0.502378 | 8_4:+37675914 | None:intergenic |
| AACGGTGCACAGAAGCTACT+TGG | 0.503218 | 8_4:-37674668 | Msa1325470:CDS |
| GCATTTGGAGGAATGTGTAT+TGG | 0.503549 | 8_4:-37672950 | Msa1325470:CDS |
| AAATTTGATTCCCGATGACC+AGG | 0.504394 | 8_4:+37673010 | None:intergenic |
| TATGGTAGTGTAGGCCAGCT+TGG | 0.505753 | 8_4:-37674596 | Msa1325470:CDS |
| AAATGGTAATGCCTGGTCAT+CGG | 0.505999 | 8_4:-37673021 | Msa1325470:CDS |
| GCCGGTAAAATGCTTCCCTA+AGG | 0.507430 | 8_4:+37674212 | None:intergenic |
| CTCAAGTTAACATAGATCTT+GGG | 0.507739 | 8_4:+37672145 | None:intergenic |
| TACCCCAAAACTGTGGGTGC+GGG | 0.508439 | 8_4:+37672743 | None:intergenic |
| TATTCTGGTAAGATGGGAGG+TGG | 0.510216 | 8_4:-37675145 | Msa1325470:exon |
| ATAACACGCATCCAATAGAA+TGG | 0.515174 | 8_4:+37674947 | None:intergenic |
| CTGAAGAATAATGGGCATGT+TGG | 0.515561 | 8_4:+37674039 | None:intergenic |
| TGATGAATATTTCTTTGAAG+AGG | 0.518607 | 8_4:-37672484 | Msa1325470:three_prime_UTR |
| AGCTAGCAGATTTGTGACAT+TGG | 0.520122 | 8_4:+37674180 | None:intergenic |
| TGGCATTTCCCACTCCAAGC+TGG | 0.520195 | 8_4:+37674582 | None:intergenic |
| ACCAAAGAAACCAAGCTCGC+TGG | 0.523159 | 8_4:+37672817 | None:intergenic |
| ATACCCCAAAACTGTGGGTG+CGG | 0.525765 | 8_4:+37672742 | None:intergenic |
| TCCTCCAAATGCAGCAGCAG+TGG | 0.526488 | 8_4:+37672961 | None:intergenic |
| TGCAAGTAATATTCCGGTCC+CGG | 0.529370 | 8_4:+37672886 | None:intergenic |
| GGGTATTGAGGAATGGAAGT+AGG | 0.531311 | 8_4:-37672725 | Msa1325470:three_prime_UTR |
| CAATCTCTACTTCATTTCCC+AGG | 0.533946 | 8_4:-37674002 | Msa1325470:intron |
| CCATTCATCAAGGAACTGCT+CGG | 0.538394 | 8_4:+37672021 | None:intergenic |
| CTAATTGTGATATACTTCCA+AGG | 0.539046 | 8_4:-37674142 | Msa1325470:CDS |
| TGGTTCCGGTGGGTAAGAAG+TGG | 0.540597 | 8_4:+37675874 | None:intergenic |
| GGTCACTCTATTCCTGTTGG+TGG | 0.542254 | 8_4:-37673817 | Msa1325470:CDS |
| CAGTTCCACGGTTTGAAGCA+AGG | 0.542857 | 8_4:+37674924 | None:intergenic |
| TTACTGTATTCTGGTAAGAT+GGG | 0.542916 | 8_4:-37675151 | Msa1325470:exon |
| TAAACATATGACGATGATAC+CGG | 0.548363 | 8_4:+37674532 | None:intergenic |
| AAACTTCATTGTGAATCTGT+TGG | 0.548669 | 8_4:-37673869 | Msa1325470:CDS |
| TAAAAGTACGCTTTACTCGT+TGG | 0.551798 | 8_4:+37672555 | None:intergenic |
| ACAGTATTGGCAGATTTCAT+GGG | 0.552268 | 8_4:-37672920 | Msa1325470:CDS |
| GAACAATGCATGGAAAGGAT+TGG | 0.553602 | 8_4:+37673591 | None:intergenic |
| CCACAACCATTAACAGTGGT+CGG | 0.553676 | 8_4:-37674306 | Msa1325470:CDS |
| ACTATATAACTGCACCCTCT+AGG | 0.554045 | 8_4:-37673786 | Msa1325470:intron |
| CAGATCCACTTCTTACCCAC+CGG | 0.554182 | 8_4:-37675879 | Msa1325470:five_prime_UTR |
| GGTGGTCACTCTATTCCTGT+TGG | 0.554775 | 8_4:-37673820 | Msa1325470:CDS |
| GAACAACAAATGGTAATGCC+TGG | 0.556580 | 8_4:-37673028 | Msa1325470:CDS |
| GTACTTTGAGACATTTGAGA+AGG | 0.557787 | 8_4:-37672846 | Msa1325470:CDS |
| AATCTGTACCTTCAACTGCT+TGG | 0.557872 | 8_4:+37673486 | None:intergenic |
| AGTGTAGGCCAGCTTGGAGT+GGG | 0.558950 | 8_4:-37674590 | Msa1325470:CDS |
| AAGAATAATGGGCATGTTGG+AGG | 0.559009 | 8_4:+37674042 | None:intergenic |
| GTAGGTCCTTTAACACAGTA+AGG | 0.560861 | 8_4:-37672707 | Msa1325470:three_prime_UTR |
| GGTCGGGGAGCTGAATTTGA+GGG | 0.561143 | 8_4:-37674289 | Msa1325470:CDS |
| CTCTACTCAGTCATCACTGT+TGG | 0.561571 | 8_4:-37672785 | Msa1325470:three_prime_UTR |
| CATTCATCAAGGAACTGCTC+GGG | 0.562154 | 8_4:+37672022 | None:intergenic |
| GATATGAACCCTGCTGTCCA+CGG | 0.564388 | 8_4:+37674083 | None:intergenic |
| AAAGAAATATTCATCATACA+TGG | 0.568310 | 8_4:+37672491 | None:intergenic |
| CCGGTAAAATGCTTCCCTAA+GGG | 0.569426 | 8_4:+37674213 | None:intergenic |
| ATATGAACCCTGCTGTCCAC+GGG | 0.572002 | 8_4:+37674084 | None:intergenic |
| GAAATGACAACCATTCATCA+AGG | 0.574842 | 8_4:+37672011 | None:intergenic |
| TCTGGAATGTATGGTAGTGT+AGG | 0.575875 | 8_4:-37674605 | Msa1325470:CDS |
| AAAATTCTCTATTACCTAGA+GGG | 0.576749 | 8_4:+37673772 | None:intergenic |
| TATTGGTGCCCTGACAGTAT+TGG | 0.578050 | 8_4:-37672933 | Msa1325470:CDS |
| TGGGACAAGAGCTACCCAAA+AGG | 0.579319 | 8_4:+37672164 | None:intergenic |
| TGACATTGGGAAGATTCTGC+CGG | 0.580213 | 8_4:+37674194 | None:intergenic |
| TACAAGTCCAGAAGTGACAA+TGG | 0.586131 | 8_4:+37674880 | None:intergenic |
| GTTATCCTTGCTTCAAACCG+TGG | 0.587811 | 8_4:-37674929 | Msa1325470:CDS |
| ACACAAGGTAGAACAATGCA+TGG | 0.589874 | 8_4:+37673581 | None:intergenic |
| CCTCCAAATGCAGCAGCAGT+GGG | 0.591311 | 8_4:+37672962 | None:intergenic |
| TCCTCAATACCCCAAAACTG+TGG | 0.591641 | 8_4:+37672736 | None:intergenic |
| AGGTAGAACAATGCATGGAA+AGG | 0.595832 | 8_4:+37673586 | None:intergenic |
| ATACATTCCAGAAAGAACAT+AGG | 0.597151 | 8_4:+37674616 | None:intergenic |
| ACCTTACAGGCAAAACCACA+CGG | 0.598007 | 8_4:+37674116 | None:intergenic |
| CAAGCTCCATAACAGTTCCA+CGG | 0.599214 | 8_4:+37674912 | None:intergenic |
| TCAAATAGAAGAAAGGGTGG+AGG | 0.604907 | 8_4:+37675920 | None:intergenic |
| TAATAATTACCAGATATTGG+TGG | 0.605322 | 8_4:+37674454 | None:intergenic |
| GAAAGTGCCATTTAGAGAGA+AGG | 0.605927 | 8_4:-37675056 | Msa1325470:CDS |
| AAGGAATCTGAGTATGGAGG+TGG | 0.605957 | 8_4:-37673838 | Msa1325470:CDS |
| TAGTGTAGGCCAGCTTGGAG+TGG | 0.606241 | 8_4:-37674591 | Msa1325470:CDS |
| ATTCTGGTAAGATGGGAGGT+GGG | 0.611852 | 8_4:-37675144 | Msa1325470:exon |
| CATCTTGATAGCTGTTGGAG+AGG | 0.612529 | 8_4:-37674645 | Msa1325470:CDS |
| CCTCAATACCCCAAAACTGT+GGG | 0.615255 | 8_4:+37672737 | None:intergenic |
| ACAACCATTAACAGTGGTCG+GGG | 0.617144 | 8_4:-37674304 | Msa1325470:CDS |
| AAATGGCACTTTCCTGTCCG+CGG | 0.628213 | 8_4:+37675066 | None:intergenic |
| GAATCTGTTGGGCAAATGGA+AGG | 0.629594 | 8_4:-37673857 | Msa1325470:CDS |
| GAAATCTGCCAATACTGTCA+GGG | 0.633038 | 8_4:+37672925 | None:intergenic |
| ACAAGAGAGCACGATCCTCA+CGG | 0.636825 | 8_4:+37674810 | None:intergenic |
| CTGTATTCTGGTAAGATGGG+AGG | 0.638392 | 8_4:-37675148 | Msa1325470:exon |
| AAGAATGCCCGTGGACAGCA+GGG | 0.641052 | 8_4:-37674091 | Msa1325470:CDS |
| GATTCAAATAGAAGAAAGGG+TGG | 0.647342 | 8_4:+37675917 | None:intergenic |
| CGGGTGAGAGAAGATAAAGC+TGG | 0.650056 | 8_4:+37672041 | None:intergenic |
| GTAAGGTCAAAGAATGCCCG+TGG | 0.666399 | 8_4:-37674100 | Msa1325470:CDS |
| GTTGATTACTAGAACAGACA+AGG | 0.670921 | 8_4:-37674242 | Msa1325470:CDS |
| GTCGAGTGTATTCCATACAG+AGG | 0.671262 | 8_4:+37674983 | None:intergenic |
| GAGCTGGAGGATGATAAGGA+TGG | 0.672248 | 8_4:+37674562 | None:intergenic |
| CATACGAGGATCTTCTTGTG+TGG | 0.676274 | 8_4:-37672213 | Msa1325470:three_prime_UTR |
| ACTGTTGGTGACGCAATCGG+GGG | 0.679445 | 8_4:-37672770 | Msa1325470:three_prime_UTR |
| TGGAAGGAATCTGAGTATGG+AGG | 0.680500 | 8_4:-37673841 | Msa1325470:CDS |
| ATACTTCCAAGGTTTCCGTG+TGG | 0.697491 | 8_4:-37674131 | Msa1325470:CDS |
| AGTCCCACAACCATTAACAG+TGG | 0.707722 | 8_4:-37674310 | Msa1325470:CDS |
| ATGCTGACAACATAAACACA+AGG | 0.717976 | 8_4:+37673566 | None:intergenic |
| CAAGTCCAGAAGTGACAATG+GGG | 0.718960 | 8_4:+37674882 | None:intergenic |
| CTGCTACACAGAAAATACAG+TGG | 0.721400 | 8_4:-37673892 | Msa1325470:CDS |
| CCTTCCTGAAGTCCAGACCG+CGG | 0.728308 | 8_4:-37675083 | Msa1325470:CDS |
| AGTCGACAACAATGTCCGTG+AGG | 0.748642 | 8_4:-37674825 | Msa1325470:CDS |
| AAGTCCAGAAGTGACAATGG+GGG | 0.757769 | 8_4:+37674883 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATCAAATAATTCAATATTT+TGG | + | chr8_4:37672461-37672480 | None:intergenic | 10.0% |
| !! | TGAATTATTTGATTAATATA+TGG | - | chr8_4:37672467-37672486 | Msa1325470:intron | 10.0% |
| !!! | TTTAATGATATTTATTGTTT+TGG | - | chr8_4:37674262-37674281 | Msa1325470:CDS | 10.0% |
| !! | CAAAAAAAAAAAAAACAATT+TGG | + | chr8_4:37674633-37674652 | None:intergenic | 10.0% |
| !! | TAATAATAATTACCAGATAT+TGG | + | chr8_4:37673481-37673500 | None:intergenic | 15.0% |
| !! | CTGGTAATTATTATTATTTA+TGG | - | chr8_4:37673485-37673504 | Msa1325470:intron | 15.0% |
| !! | GTAAAATCATATTGTTAAAA+CGG | + | chr8_4:37674004-37674023 | None:intergenic | 15.0% |
| !! | AAAAAAATAATTTCAGCATA+TGG | + | chr8_4:37674609-37674628 | None:intergenic | 15.0% |
| !!! | TTTTATGTTTTGTATTGTTT+TGG | - | chr8_4:37675689-37675708 | Msa1325470:intron | 15.0% |
| !!! | TCAATTGATTTTTCACAAAT+AGG | - | chr8_4:37672093-37672112 | Msa1325470:three_prime_UTR | 20.0% |
| !! | ATAATACAAACAAATGAACT+AGG | + | chr8_4:37672423-37672442 | None:intergenic | 20.0% |
| !!! | CCATATAAATAAGAATGTTT+TGG | + | chr8_4:37672669-37672688 | None:intergenic | 20.0% |
| !!! | CCAAAACATTCTTATTTATA+TGG | - | chr8_4:37672666-37672685 | Msa1325470:three_prime_UTR | 20.0% |
| !! | TCTAATATATGAAAGTAGAT+TGG | - | chr8_4:37673207-37673226 | Msa1325470:intron | 20.0% |
| !!! | TATACTTTTATCTAGTACTA+AGG | - | chr8_4:37674499-37674518 | Msa1325470:CDS | 20.0% |
| !!! | CACTTTACTGATTATTTTTT+AGG | - | chr8_4:37674666-37674685 | Msa1325470:CDS | 20.0% |
| !! | AAAGAAATATTCATCATACA+TGG | + | chr8_4:37675441-37675460 | None:intergenic | 20.0% |
| !!! | TTAAGACTTTCTTTTTCTTT+GGG | + | chr8_4:37675566-37675585 | None:intergenic | 20.0% |
| !!! | ATTAAGACTTTCTTTTTCTT+TGG | + | chr8_4:37675567-37675586 | None:intergenic | 20.0% |
| !! | AAAGAAAAAGAAAGTCTTAA+TGG | - | chr8_4:37675566-37675585 | Msa1325470:intron | 20.0% |
| ! | TCAGATTTGTATCAATTCAT+CGG | - | chr8_4:37672164-37672183 | Msa1325470:three_prime_UTR | 25.0% |
| !! | TTAACGTTGTATAATTTGTC+TGG | - | chr8_4:37672218-37672237 | Msa1325470:three_prime_UTR | 25.0% |
| !!! | GTTTTGAATTCGTATATGTT+CGG | - | chr8_4:37672287-37672306 | Msa1325470:intron | 25.0% |
| !!! | ATGTTTTGAATGCATTCATA+CGG | - | chr8_4:37672344-37672363 | Msa1325470:intron | 25.0% |
| ! | AGAAATAACCAAGAAACATT+CGG | + | chr8_4:37672632-37672651 | None:intergenic | 25.0% |
| ! | AATTATAACTAAGAACACCT+CGG | + | chr8_4:37672730-37672749 | None:intergenic | 25.0% |
| ! | ATAATTGCGTTGTAAATTTG+TGG | - | chr8_4:37672744-37672763 | Msa1325470:three_prime_UTR | 25.0% |
| ! | ACAAACAAGAAAAATGAAGA+GGG | + | chr8_4:37672917-37672936 | None:intergenic | 25.0% |
| ! | TACAAACAAGAAAAATGAAG+AGG | + | chr8_4:37672918-37672937 | None:intergenic | 25.0% |
| ! | TAATAATTACCAGATATTGG+TGG | + | chr8_4:37673478-37673497 | None:intergenic | 25.0% |
| ! | TTTAAGGAAGAATTCTCATT+TGG | - | chr8_4:37673565-37673584 | Msa1325470:CDS | 25.0% |
| ! | ATAATAAAACTCTACTACCT+GGG | + | chr8_4:37673947-37673966 | None:intergenic | 25.0% |
| !! | TATTATGGTATGTTGCTTAT+TGG | - | chr8_4:37673961-37673980 | Msa1325470:intron | 25.0% |
| ! | AAAATTCTCTATTACCTAGA+GGG | + | chr8_4:37674160-37674179 | None:intergenic | 25.0% |
| !! | TAGAGAATTTTCTATTCAGT+TGG | - | chr8_4:37674169-37674188 | Msa1325470:CDS | 25.0% |
| ! | GGCAAAGAATATAATCTAAT+AGG | + | chr8_4:37674215-37674234 | None:intergenic | 25.0% |
| !! | TTGAAGCTTTATATCAAACT+AGG | + | chr8_4:37674236-37674255 | None:intergenic | 25.0% |
| !!! | GTCTGAAATTTTTATGATGA+TGG | - | chr8_4:37674720-37674739 | Msa1325470:intron | 25.0% |
| !!! | CACTTTTTTAACACTGAAAT+TGG | - | chr8_4:37674794-37674813 | Msa1325470:intron | 25.0% |
| !! | TGATGAATATTTCTTTGAAG+AGG | - | chr8_4:37675445-37675464 | Msa1325470:intron | 25.0% |
| ! | TATTTCTTCAACAGAAATCT+TGG | - | chr8_4:37675532-37675551 | Msa1325470:intron | 25.0% |
| !! | TAAGACTTTCTTTTTCTTTG+GGG | + | chr8_4:37675565-37675584 | None:intergenic | 25.0% |
| ! | TAAAAGCAGTATTTCAAGAA+AGG | + | chr8_4:37675674-37675693 | None:intergenic | 25.0% |
| ! | TCATCATTGAACAAAATGTT+TGG | + | chr8_4:37675821-37675840 | None:intergenic | 25.0% |
| !! | AACATTTCAAATTGATGACT+TGG | - | chr8_4:37675861-37675880 | Msa1325470:five_prime_UTR | 25.0% |
| ACCCTTTCTTCTATTTGAAT+CGG | - | chr8_4:37672014-37672033 | Msa1325470:three_prime_UTR | 30.0% | |
| TCCGATTCAAATAGAAGAAA+GGG | + | chr8_4:37672018-37672037 | None:intergenic | 30.0% | |
| TTCCGATTCAAATAGAAGAA+AGG | + | chr8_4:37672019-37672038 | None:intergenic | 30.0% | |
| ! | ATTGAGAGAGATGAGAATTT+TGG | + | chr8_4:37672078-37672097 | None:intergenic | 30.0% |
| AATTATGTCCGAATGTTTCT+TGG | - | chr8_4:37672621-37672640 | Msa1325470:three_prime_UTR | 30.0% | |
| CAGGTTAAATTACTGTATTC+TGG | - | chr8_4:37672769-37672788 | Msa1325470:three_prime_UTR | 30.0% | |
| ATTACTGTATTCTGGTAAGA+TGG | - | chr8_4:37672777-37672796 | Msa1325470:three_prime_UTR | 30.0% | |
| TTACTGTATTCTGGTAAGAT+GGG | - | chr8_4:37672778-37672797 | Msa1325470:three_prime_UTR | 30.0% | |
| ! | TTAGAGTACTTCACTTAGTA+AGG | - | chr8_4:37672809-37672828 | Msa1325470:exon | 30.0% |
| TATATGACCTTCTCTCTAAA+TGG | + | chr8_4:37672883-37672902 | None:intergenic | 30.0% | |
| ! | GTATATTTCCTAGAGTTTTG+TGG | - | chr8_4:37673157-37673176 | Msa1325470:intron | 30.0% |
| ATAAATTACTCTTTGCTCTC+AGG | - | chr8_4:37673238-37673257 | Msa1325470:intron | 30.0% | |
| ATACATTCCAGAAAGAACAT+AGG | + | chr8_4:37673316-37673335 | None:intergenic | 30.0% | |
| !! | TATGTTCTTTCTGGAATGTA+TGG | - | chr8_4:37673315-37673334 | Msa1325470:intron | 30.0% |
| TAAACATATGACGATGATAC+CGG | + | chr8_4:37673400-37673419 | None:intergenic | 30.0% | |
| !! | TTTTGTTTAGTAGTTGCAAC+AGG | + | chr8_4:37673516-37673535 | None:intergenic | 30.0% |
| GATGCAGTGAAAACATTATA+TGG | - | chr8_4:37673587-37673606 | Msa1325470:CDS | 30.0% | |
| CTGTTCTAGTAATCAACAAA+TGG | + | chr8_4:37673684-37673703 | None:intergenic | 30.0% | |
| ! | CTTGGAAGTATATCACAATT+AGG | + | chr8_4:37673789-37673808 | None:intergenic | 30.0% |
| CTAATTGTGATATACTTCCA+AGG | - | chr8_4:37673787-37673806 | Msa1325470:CDS | 30.0% | |
| CATAATAAAACTCTACTACC+TGG | + | chr8_4:37673948-37673967 | None:intergenic | 30.0% | |
| !!! | CAGGTAGTAGAGTTTTATTA+TGG | - | chr8_4:37673946-37673965 | Msa1325470:intron | 30.0% |
| AAACTTCATTGTGAATCTGT+TGG | - | chr8_4:37674060-37674079 | Msa1325470:CDS | 30.0% | |
| AACTTCATTGTGAATCTGTT+GGG | - | chr8_4:37674061-37674080 | Msa1325470:CDS | 30.0% | |
| GAAAATTCTCTATTACCTAG+AGG | + | chr8_4:37674161-37674180 | None:intergenic | 30.0% | |
| !!! | AATCCAAGTTTTAGAGAACA+AGG | + | chr8_4:37674392-37674411 | None:intergenic | 30.0% |
| ! | AATCAGTAAAGTGTTTGAAG+TGG | + | chr8_4:37674659-37674678 | None:intergenic | 30.0% |
| !! | ACAATCATTTTTCAACTTGC+AGG | - | chr8_4:37674879-37674898 | Msa1325470:CDS | 30.0% |
| TGTTACTGCAAGTAATATTC+CGG | + | chr8_4:37675052-37675071 | None:intergenic | 30.0% | |
| !!! | AATCACCTTTTTCTAAAGTG+AGG | - | chr8_4:37675266-37675285 | Msa1325470:intron | 30.0% |
| ! | TACTTCCTCACTTTAGAAAA+AGG | + | chr8_4:37675274-37675293 | None:intergenic | 30.0% |
| ! | TTTACAACGATATGCTACTT+TGG | + | chr8_4:37675297-37675316 | None:intergenic | 30.0% |
| TAACGTCATTCCAATTGAAA+AGG | - | chr8_4:37675483-37675502 | Msa1325470:intron | 30.0% | |
| TCATTCCAATTGAAAAGGAA+TGG | - | chr8_4:37675488-37675507 | Msa1325470:intron | 30.0% | |
| CATTCCAATTGAAAAGGAAT+GGG | - | chr8_4:37675489-37675508 | Msa1325470:intron | 30.0% | |
| !! | ATGACCATTTTTGCTTATCT+TGG | - | chr8_4:37675589-37675608 | Msa1325470:intron | 30.0% |
| AAAGAAAAGTCAGAACATCT+GGG | + | chr8_4:37675625-37675644 | None:intergenic | 30.0% | |
| AAAAGAAAAGTCAGAACATC+TGG | + | chr8_4:37675626-37675645 | None:intergenic | 30.0% | |
| CTCAAGTTAACATAGATCTT+GGG | + | chr8_4:37675787-37675806 | None:intergenic | 30.0% | |
| ACTCAAGTTAACATAGATCT+TGG | + | chr8_4:37675788-37675807 | None:intergenic | 30.0% | |
| GATTCAAATAGAAGAAAGGG+TGG | + | chr8_4:37672015-37672034 | None:intergenic | 35.0% | |
| !!! | AGAGATGAGAATTTTGGTTC+CGG | + | chr8_4:37672072-37672091 | None:intergenic | 35.0% |
| ! | TTTTGTGTGTGCATGTGTTT+AGG | - | chr8_4:37672317-37672336 | Msa1325470:intron | 35.0% |
| !! | TTGATTTGATTTTGATGCCG+AGG | - | chr8_4:37672710-37672729 | Msa1325470:three_prime_UTR | 35.0% |
| TCAGGAAGGAATGATAGAAA+TGG | + | chr8_4:37672835-37672854 | None:intergenic | 35.0% | |
| AAAAATGAAGAGGGAGATCA+CGG | + | chr8_4:37672908-37672927 | None:intergenic | 35.0% | |
| ATAACACGCATCCAATAGAA+TGG | + | chr8_4:37672985-37673004 | None:intergenic | 35.0% | |
| ATATTGCACCACAAAACTCT+AGG | + | chr8_4:37673168-37673187 | None:intergenic | 35.0% | |
| !! | TAGAGTTTTGTGGTGCAATA+TGG | - | chr8_4:37673167-37673186 | Msa1325470:intron | 35.0% |
| TTAGATGAGCTCCTTCAAAA+AGG | - | chr8_4:37673417-37673436 | Msa1325470:intron | 35.0% | |
| CTTCAAAAAGGCTATGGTTT+GGG | - | chr8_4:37673429-37673448 | Msa1325470:intron | 35.0% | |
| TATTCATTGCCACCAATATC+TGG | - | chr8_4:37673466-37673485 | Msa1325470:intron | 35.0% | |
| GTTGATTACTAGAACAGACA+AGG | - | chr8_4:37673687-37673706 | Msa1325470:intron | 35.0% | |
| GAGGTGTAAAACAGTTTGAT+TGG | + | chr8_4:37673871-37673890 | None:intergenic | 35.0% | |
| AGAGCAGACTGAAGAATAAT+GGG | + | chr8_4:37673901-37673920 | None:intergenic | 35.0% | |
| AAGAGCAGACTGAAGAATAA+TGG | + | chr8_4:37673902-37673921 | None:intergenic | 35.0% | |
| AAATGGAAGGAATCTGAGTA+TGG | - | chr8_4:37674085-37674104 | Msa1325470:CDS | 35.0% | |
| ! | GTTTTACAGCTTAGCTGATA+TGG | - | chr8_4:37674312-37674331 | Msa1325470:CDS | 35.0% |
| ATGCTGACAACATAAACACA+AGG | + | chr8_4:37674366-37674385 | None:intergenic | 35.0% | |
| AAAACTTGGATTGAAGTCTC+TGG | - | chr8_4:37674400-37674419 | Msa1325470:intron | 35.0% | |
| !! | TGCAGTTGATAACTGTCTTA+AGG | - | chr8_4:37674766-37674785 | Msa1325470:intron | 35.0% |
| AAAACCAATCAGTTCACTCA+TGG | + | chr8_4:37674835-37674854 | None:intergenic | 35.0% | |
| !! | ACAGTATTGGCAGATTTCAT+GGG | - | chr8_4:37675009-37675028 | Msa1325470:CDS | 35.0% |
| !! | GTACTTTGAGACATTTGAGA+AGG | - | chr8_4:37675083-37675102 | Msa1325470:CDS | 35.0% |
| GTTCTTCCTTACTGTGTTAA+AGG | + | chr8_4:37675231-37675250 | None:intergenic | 35.0% | |
| ! | TAAAAGTACGCTTTACTCGT+TGG | + | chr8_4:37675377-37675396 | None:intergenic | 35.0% |
| CAGTCCAAGATAAGCAAAAA+TGG | + | chr8_4:37675596-37675615 | None:intergenic | 35.0% | |
| !!! | ATTGTTTTGGTAGACATACG+AGG | - | chr8_4:37675702-37675721 | Msa1325470:intron | 35.0% |
| ! | TTCTAGATAGGATCTCCTTT+TGG | - | chr8_4:37675750-37675769 | Msa1325470:intron | 35.0% |
| ! | TCTAGATAGGATCTCCTTTT+GGG | - | chr8_4:37675751-37675770 | Msa1325470:intron | 35.0% |
| GAAATGACAACCATTCATCA+AGG | + | chr8_4:37675921-37675940 | None:intergenic | 35.0% | |
| TCAAATAGAAGAAAGGGTGG+AGG | + | chr8_4:37672012-37672031 | None:intergenic | 40.0% | |
| !!! | ATGAGAATTTTGGTTCCGGT+GGG | + | chr8_4:37672068-37672087 | None:intergenic | 40.0% |
| GTGAGCAAATTGTTGATCTG+TGG | - | chr8_4:37672252-37672271 | Msa1325470:intron | 40.0% | |
| TTGATCTGTGGCGTGTAATT+AGG | - | chr8_4:37672264-37672283 | Msa1325470:intron | 40.0% | |
| TGATCTGTGGCGTGTAATTA+GGG | - | chr8_4:37672265-37672284 | Msa1325470:intron | 40.0% | |
| !! | GAAAGTGCCATTTAGAGAGA+AGG | - | chr8_4:37672873-37672892 | Msa1325470:CDS | 40.0% |
| TATGGAATACACTCGACAAC+AGG | - | chr8_4:37672952-37672971 | Msa1325470:CDS | 40.0% | |
| TTCAAACCGTGGAACTGTTA+TGG | - | chr8_4:37673011-37673030 | Msa1325470:CDS | 40.0% | |
| ACAAGTCCAGAAGTGACAAT+GGG | + | chr8_4:37673051-37673070 | None:intergenic | 40.0% | |
| TACAAGTCCAGAAGTGACAA+TGG | + | chr8_4:37673052-37673071 | None:intergenic | 40.0% | |
| ! | TGGACTTGTAATGCAGCTTT+TGG | - | chr8_4:37673062-37673081 | Msa1325470:intron | 40.0% |
| !! | AGTTTTGTGGTGCAATATGG+TGG | - | chr8_4:37673170-37673189 | Msa1325470:intron | 40.0% |
| TTACTCTTTGCTCTCAGGAA+CGG | - | chr8_4:37673243-37673262 | Msa1325470:intron | 40.0% | |
| ! | TCTGGAATGTATGGTAGTGT+AGG | - | chr8_4:37673324-37673343 | Msa1325470:intron | 40.0% |
| AAAAGAGCTGGAGGATGATA+AGG | + | chr8_4:37673374-37673393 | None:intergenic | 40.0% | |
| ! | CCAAACCATAGCCTTTTTGA+AGG | + | chr8_4:37673431-37673450 | None:intergenic | 40.0% |
| CCTTCAAAAAGGCTATGGTT+TGG | - | chr8_4:37673428-37673447 | Msa1325470:intron | 40.0% | |
| GCTAGCAGATTTGTGACATT+GGG | + | chr8_4:37673751-37673770 | None:intergenic | 40.0% | |
| AGCTAGCAGATTTGTGACAT+TGG | + | chr8_4:37673752-37673771 | None:intergenic | 40.0% | |
| !! | AAGAATAATGGGCATGTTGG+AGG | + | chr8_4:37673890-37673909 | None:intergenic | 40.0% |
| !! | CTGAAGAATAATGGGCATGT+TGG | + | chr8_4:37673893-37673912 | None:intergenic | 40.0% |
| CTGGGAAATGAAGTAGAGAT+TGG | + | chr8_4:37673929-37673948 | None:intergenic | 40.0% | |
| CAATCTCTACTTCATTTCCC+AGG | - | chr8_4:37673927-37673946 | Msa1325470:intron | 40.0% | |
| CTGCTACACAGAAAATACAG+TGG | - | chr8_4:37674037-37674056 | Msa1325470:CDS | 40.0% | |
| TTGTGAATCTGTTGGGCAAA+TGG | - | chr8_4:37674068-37674087 | Msa1325470:CDS | 40.0% | |
| ACTATATAACTGCACCCTCT+AGG | - | chr8_4:37674143-37674162 | Msa1325470:CDS | 40.0% | |
| GAACAATGCATGGAAAGGAT+TGG | + | chr8_4:37674341-37674360 | None:intergenic | 40.0% | |
| AGGTAGAACAATGCATGGAA+AGG | + | chr8_4:37674346-37674365 | None:intergenic | 40.0% | |
| ACACAAGGTAGAACAATGCA+TGG | + | chr8_4:37674351-37674370 | None:intergenic | 40.0% | |
| !! | GTGCCTTGTTCTCTAAAACT+TGG | - | chr8_4:37674386-37674405 | Msa1325470:intron | 40.0% |
| AATCTGTACCTTCAACTGCT+TGG | + | chr8_4:37674446-37674465 | None:intergenic | 40.0% | |
| AAGTCCATGAGTGAACTGAT+TGG | - | chr8_4:37674828-37674847 | Msa1325470:CDS | 40.0% | |
| CAACTTGCAGGAACAACAAA+TGG | - | chr8_4:37674891-37674910 | Msa1325470:CDS | 40.0% | |
| ! | GAACAACAAATGGTAATGCC+TGG | - | chr8_4:37674901-37674920 | Msa1325470:CDS | 40.0% |
| ! | AAATGGTAATGCCTGGTCAT+CGG | - | chr8_4:37674908-37674927 | Msa1325470:CDS | 40.0% |
| AAATTTGATTCCCGATGACC+AGG | + | chr8_4:37674922-37674941 | None:intergenic | 40.0% | |
| GCATTTGGAGGAATGTGTAT+TGG | - | chr8_4:37674979-37674998 | Msa1325470:CDS | 40.0% | |
| GAAATCTGCCAATACTGTCA+GGG | + | chr8_4:37675007-37675026 | None:intergenic | 40.0% | |
| TGAAATCTGCCAATACTGTC+AGG | + | chr8_4:37675008-37675027 | None:intergenic | 40.0% | |
| !! | GACAGTATTGGCAGATTTCA+TGG | - | chr8_4:37675008-37675027 | Msa1325470:CDS | 40.0% |
| !!! | AGTTTTGGGGTATTGAGGAA+TGG | - | chr8_4:37675197-37675216 | Msa1325470:intron | 40.0% |
| GTAGGTCCTTTAACACAGTA+AGG | - | chr8_4:37675222-37675241 | Msa1325470:intron | 40.0% | |
| !! | GACTTTCTTTTTCTTTGGGG+AGG | + | chr8_4:37675562-37675581 | None:intergenic | 40.0% |
| !! | GCTCTTTGGTAGTTCTAGAT+AGG | - | chr8_4:37675738-37675757 | Msa1325470:intron | 40.0% |
| !!! | GATGAGAATTTTGGTTCCGG+TGG | + | chr8_4:37672069-37672088 | None:intergenic | 45.0% |
| TGCATTCATACGGATCTAGC+TGG | - | chr8_4:37672354-37672373 | Msa1325470:intron | 45.0% | |
| !! | GAGCATCGAAACAAACACAC+AGG | + | chr8_4:37672596-37672615 | None:intergenic | 45.0% |
| GCGTTGTAAATTTGTGGTGC+AGG | - | chr8_4:37672750-37672769 | Msa1325470:three_prime_UTR | 45.0% | |
| CTGTATTCTGGTAAGATGGG+AGG | - | chr8_4:37672781-37672800 | Msa1325470:three_prime_UTR | 45.0% | |
| TATTCTGGTAAGATGGGAGG+TGG | - | chr8_4:37672784-37672803 | Msa1325470:three_prime_UTR | 45.0% | |
| ATTCTGGTAAGATGGGAGGT+GGG | - | chr8_4:37672785-37672804 | Msa1325470:three_prime_UTR | 45.0% | |
| TGTAGTCAGCTTCCTCTGTA+TGG | - | chr8_4:37672934-37672953 | Msa1325470:CDS | 45.0% | |
| GTCGAGTGTATTCCATACAG+AGG | + | chr8_4:37672949-37672968 | None:intergenic | 45.0% | |
| CAGGTGCAGATCCATTCTAT+TGG | - | chr8_4:37672971-37672990 | Msa1325470:CDS | 45.0% | |
| GTTATCCTTGCTTCAAACCG+TGG | - | chr8_4:37673000-37673019 | Msa1325470:CDS | 45.0% | |
| CAAGCTCCATAACAGTTCCA+CGG | + | chr8_4:37673020-37673039 | None:intergenic | 45.0% | |
| AAGTCCAGAAGTGACAATGG+GGG | + | chr8_4:37673049-37673068 | None:intergenic | 45.0% | |
| CAAGTCCAGAAGTGACAATG+GGG | + | chr8_4:37673050-37673069 | None:intergenic | 45.0% | |
| ! | CTTGTAATGCAGCTTTTGGC+TGG | - | chr8_4:37673066-37673085 | Msa1325470:intron | 45.0% |
| ! | CTTGGCATCTTGATAGCTGT+TGG | - | chr8_4:37673279-37673298 | Msa1325470:intron | 45.0% |
| ! | CATCTTGATAGCTGTTGGAG+AGG | - | chr8_4:37673284-37673303 | Msa1325470:intron | 45.0% |
| GCTGTTGCCTATGTTCTTTC+TGG | - | chr8_4:37673306-37673325 | Msa1325470:intron | 45.0% | |
| !!! | ATCCTCCAGCTCTTTTTTGC+CGG | - | chr8_4:37673378-37673397 | Msa1325470:intron | 45.0% |
| TGATACCGGCAAAAAAGAGC+TGG | + | chr8_4:37673386-37673405 | None:intergenic | 45.0% | |
| GAGCTCCTTCAAAAAGGCTA+TGG | - | chr8_4:37673423-37673442 | Msa1325470:intron | 45.0% | |
| ! | AAAGGCTATGGTTTGGGATC+TGG | - | chr8_4:37673435-37673454 | Msa1325470:intron | 45.0% |
| AGTCCCACAACCATTAACAG+TGG | - | chr8_4:37673619-37673638 | Msa1325470:intron | 45.0% | |
| CGACCACTGTTAATGGTTGT+GGG | + | chr8_4:37673625-37673644 | None:intergenic | 45.0% | |
| CCACAACCATTAACAGTGGT+CGG | - | chr8_4:37673623-37673642 | Msa1325470:intron | 45.0% | |
| CACAACCATTAACAGTGGTC+GGG | - | chr8_4:37673624-37673643 | Msa1325470:intron | 45.0% | |
| ACAACCATTAACAGTGGTCG+GGG | - | chr8_4:37673625-37673644 | Msa1325470:intron | 45.0% | |
| CCGGTAAAATGCTTCCCTAA+GGG | + | chr8_4:37673719-37673738 | None:intergenic | 45.0% | |
| !!! | CCCTTAGGGAAGCATTTTAC+CGG | - | chr8_4:37673716-37673735 | Msa1325470:intron | 45.0% |
| TGACATTGGGAAGATTCTGC+CGG | + | chr8_4:37673738-37673757 | None:intergenic | 45.0% | |
| ATACTTCCAAGGTTTCCGTG+TGG | - | chr8_4:37673798-37673817 | Msa1325470:CDS | 45.0% | |
| ACCTTACAGGCAAAACCACA+CGG | + | chr8_4:37673816-37673835 | None:intergenic | 45.0% | |
| GAATCTGTTGGGCAAATGGA+AGG | - | chr8_4:37674072-37674091 | Msa1325470:CDS | 45.0% | |
| TGGAAGGAATCTGAGTATGG+AGG | - | chr8_4:37674088-37674107 | Msa1325470:CDS | 45.0% | |
| AAGGAATCTGAGTATGGAGG+TGG | - | chr8_4:37674091-37674110 | Msa1325470:CDS | 45.0% | |
| TAGTATGCAATGCCACCAAC+AGG | + | chr8_4:37674127-37674146 | None:intergenic | 45.0% | |
| AGATGTTGCCAAGCAGTTGA+AGG | - | chr8_4:37674435-37674454 | Msa1325470:intron | 45.0% | |
| ! | AATGGTAATGCCTGGTCATC+GGG | - | chr8_4:37674909-37674928 | Msa1325470:CDS | 45.0% |
| CAGCAGCAGTGGGAATATAT+CGG | + | chr8_4:37674960-37674979 | None:intergenic | 45.0% | |
| ! | TATTGGTGCCCTGACAGTAT+TGG | - | chr8_4:37674996-37675015 | Msa1325470:CDS | 45.0% |
| GCAGATTTCATGGGTGCAAT+TGG | - | chr8_4:37675018-37675037 | Msa1325470:CDS | 45.0% | |
| ! | TTCATGGGTGCAATTGGTTC+CGG | - | chr8_4:37675024-37675043 | Msa1325470:CDS | 45.0% |
| TGCAAGTAATATTCCGGTCC+CGG | + | chr8_4:37675046-37675065 | None:intergenic | 45.0% | |
| CTCTACTCAGTCATCACTGT+TGG | - | chr8_4:37675144-37675163 | Msa1325470:exon | 45.0% | |
| !! | ATCACTGTTGGTGACGCAAT+CGG | - | chr8_4:37675156-37675175 | Msa1325470:five_prime_UTR | 45.0% |
| CCTCAATACCCCAAAACTGT+GGG | + | chr8_4:37675195-37675214 | None:intergenic | 45.0% | |
| TCCTCAATACCCCAAAACTG+TGG | + | chr8_4:37675196-37675215 | None:intergenic | 45.0% | |
| !! | GGGTATTGAGGAATGGAAGT+AGG | - | chr8_4:37675204-37675223 | Msa1325470:intron | 45.0% |
| ! | CGAGCCCATTCCTTTTCAAT+TGG | + | chr8_4:37675496-37675515 | None:intergenic | 45.0% |
| GAAAAGTCAGAACATCTGGG+TGG | + | chr8_4:37675622-37675641 | None:intergenic | 45.0% | |
| CATACGAGGATCTTCTTGTG+TGG | - | chr8_4:37675716-37675735 | Msa1325470:intron | 45.0% | |
| GATCTTCTTGTGTGGCTCTT+TGG | - | chr8_4:37675724-37675743 | Msa1325470:intron | 45.0% | |
| CATTCATCAAGGAACTGCTC+GGG | + | chr8_4:37675910-37675929 | None:intergenic | 45.0% | |
| CCATTCATCAAGGAACTGCT+CGG | + | chr8_4:37675911-37675930 | None:intergenic | 45.0% | |
| !!! | ATTTTGTTTTTTATATAAAA+AGG | + | chr8_4:37673546-37673565 | None:intergenic | 5.0% |
| !! | TATATAAAAAACAAAATTTA+AGG | - | chr8_4:37673549-37673568 | Msa1325470:CDS | 5.0% |
| !! | AAAAAAAAAAAAAACAATTT+GGG | + | chr8_4:37674632-37674651 | None:intergenic | 5.0% |
| CAGATCCACTTCTTACCCAC+CGG | - | chr8_4:37672050-37672069 | Msa1325470:three_prime_UTR | 50.0% | |
| ATACGGATCTAGCTGGATCG+AGG | - | chr8_4:37672361-37672380 | Msa1325470:intron | 50.0% | |
| !! | GCTGGATCGAGGTGGATTTT+CGG | - | chr8_4:37672372-37672391 | Msa1325470:intron | 50.0% |
| AAATGGCACTTTCCTGTCCG+CGG | + | chr8_4:37672866-37672885 | None:intergenic | 50.0% | |
| ! | CAGTTCCACGGTTTGAAGCA+AGG | + | chr8_4:37673008-37673027 | None:intergenic | 50.0% |
| CGTGGAACTGTTATGGAGCT+TGG | - | chr8_4:37673018-37673037 | Msa1325470:CDS | 50.0% | |
| ! | ATCACCCCCATTGTCACTTC+TGG | - | chr8_4:37673042-37673061 | Msa1325470:intron | 50.0% |
| AGTCGACAACAATGTCCGTG+AGG | - | chr8_4:37673104-37673123 | Msa1325470:intron | 50.0% | |
| ! | ACAAGAGAGCACGATCCTCA+CGG | + | chr8_4:37673122-37673141 | None:intergenic | 50.0% |
| AACGGTGCACAGAAGCTACT+TGG | - | chr8_4:37673261-37673280 | Msa1325470:intron | 50.0% | |
| ! | TATGGTAGTGTAGGCCAGCT+TGG | - | chr8_4:37673333-37673352 | Msa1325470:intron | 50.0% |
| GAGCTGGAGGATGATAAGGA+TGG | + | chr8_4:37673370-37673389 | None:intergenic | 50.0% | |
| TACCGGCAAAAAAGAGCTGG+AGG | + | chr8_4:37673383-37673402 | None:intergenic | 50.0% | |
| CCGACCACTGTTAATGGTTG+TGG | + | chr8_4:37673626-37673645 | None:intergenic | 50.0% | |
| AGACAAGGTTCGTGCCCTTA+GGG | - | chr8_4:37673702-37673721 | Msa1325470:intron | 50.0% | |
| GCCGGTAAAATGCTTCCCTA+AGG | + | chr8_4:37673720-37673739 | None:intergenic | 50.0% | |
| GCAAAACCACACGGAAACCT+TGG | + | chr8_4:37673807-37673826 | None:intergenic | 50.0% | |
| !! | TCCGTGTGGTTTTGCCTGTA+AGG | - | chr8_4:37673812-37673831 | Msa1325470:CDS | 50.0% |
| CGGGCATTCTTTGACCTTAC+AGG | + | chr8_4:37673829-37673848 | None:intergenic | 50.0% | |
| GTAAGGTCAAAGAATGCCCG+TGG | - | chr8_4:37673829-37673848 | Msa1325470:CDS | 50.0% | |
| ATATGAACCCTGCTGTCCAC+GGG | + | chr8_4:37673848-37673867 | None:intergenic | 50.0% | |
| GATATGAACCCTGCTGTCCA+CGG | + | chr8_4:37673849-37673868 | None:intergenic | 50.0% | |
| GGTGGTCACTCTATTCCTGT+TGG | - | chr8_4:37674109-37674128 | Msa1325470:CDS | 50.0% | |
| GGTCACTCTATTCCTGTTGG+TGG | - | chr8_4:37674112-37674131 | Msa1325470:CDS | 50.0% | |
| ATTCCCACTGCTGCTGCATT+TGG | - | chr8_4:37674964-37674983 | Msa1325470:CDS | 50.0% | |
| ! | TCATGGGTGCAATTGGTTCC+GGG | - | chr8_4:37675025-37675044 | Msa1325470:CDS | 50.0% |
| ACCAAAGAAACCAAGCTCGC+TGG | + | chr8_4:37675115-37675134 | None:intergenic | 50.0% | |
| !! | TCACTGTTGGTGACGCAATC+GGG | - | chr8_4:37675157-37675176 | Msa1325470:five_prime_UTR | 50.0% |
| ! | TTATCCCGCACCCACAGTTT+TGG | - | chr8_4:37675182-37675201 | Msa1325470:intron | 50.0% |
| ! | TATCCCGCACCCACAGTTTT+GGG | - | chr8_4:37675183-37675202 | Msa1325470:intron | 50.0% |
| ATACCCCAAAACTGTGGGTG+CGG | + | chr8_4:37675190-37675209 | None:intergenic | 50.0% | |
| !!! | CCCACAGTTTTGGGGTATTG+AGG | - | chr8_4:37675192-37675211 | Msa1325470:intron | 50.0% |
| ! | GAATGGGCTCGCAGAATTGA+GGG | - | chr8_4:37675505-37675524 | Msa1325470:intron | 50.0% |
| TGGGACAAGAGCTACCCAAA+AGG | + | chr8_4:37675768-37675787 | None:intergenic | 50.0% | |
| CGGGTGAGAGAAGATAAAGC+TGG | + | chr8_4:37675891-37675910 | None:intergenic | 50.0% | |
| CCGAGCAGTTCCTTGATGAA+TGG | - | chr8_4:37675908-37675927 | Msa1325470:five_prime_UTR | 50.0% | |
| TGGTTCCGGTGGGTAAGAAG+TGG | + | chr8_4:37672058-37672077 | None:intergenic | 55.0% | |
| TAGTGTAGGCCAGCTTGGAG+TGG | - | chr8_4:37673338-37673357 | Msa1325470:intron | 55.0% | |
| AGTGTAGGCCAGCTTGGAGT+GGG | - | chr8_4:37673339-37673358 | Msa1325470:intron | 55.0% | |
| TGGCATTTCCCACTCCAAGC+TGG | + | chr8_4:37673350-37673369 | None:intergenic | 55.0% | |
| AGCTCCCCGACCACTGTTAA+TGG | + | chr8_4:37673632-37673651 | None:intergenic | 55.0% | |
| TGGTCGGGGAGCTGAATTTG+AGG | - | chr8_4:37673639-37673658 | Msa1325470:intron | 55.0% | |
| GGTCGGGGAGCTGAATTTGA+GGG | - | chr8_4:37673640-37673659 | Msa1325470:intron | 55.0% | |
| CAGACAAGGTTCGTGCCCTT+AGG | - | chr8_4:37673701-37673720 | Msa1325470:intron | 55.0% | |
| AAAGAATGCCCGTGGACAGC+AGG | - | chr8_4:37673837-37673856 | Msa1325470:CDS | 55.0% | |
| AAGAATGCCCGTGGACAGCA+GGG | - | chr8_4:37673838-37673857 | Msa1325470:CDS | 55.0% | |
| CCTCCAAATGCAGCAGCAGT+GGG | + | chr8_4:37674970-37674989 | None:intergenic | 55.0% | |
| TCCTCCAAATGCAGCAGCAG+TGG | + | chr8_4:37674971-37674990 | None:intergenic | 55.0% | |
| AAGGAAAGAGCCAGCGAGCT+TGG | - | chr8_4:37675102-37675121 | Msa1325470:CDS | 55.0% | |
| GCCAGCGAGCTTGGTTTCTT+TGG | - | chr8_4:37675111-37675130 | Msa1325470:CDS | 55.0% | |
| !! | CACTGTTGGTGACGCAATCG+GGG | - | chr8_4:37675158-37675177 | Msa1325470:five_prime_UTR | 55.0% |
| !! | ACTGTTGGTGACGCAATCGG+GGG | - | chr8_4:37675159-37675178 | Msa1325470:five_prime_UTR | 55.0% |
| ! | ATCCCGCACCCACAGTTTTG+GGG | - | chr8_4:37675184-37675203 | Msa1325470:intron | 55.0% |
| TACCCCAAAACTGTGGGTGC+GGG | + | chr8_4:37675189-37675208 | None:intergenic | 55.0% | |
| ! | GGAATGGGCTCGCAGAATTG+AGG | - | chr8_4:37675504-37675523 | Msa1325470:intron | 55.0% |
| CGGATCTAGCTGGATCGAGG+TGG | - | chr8_4:37672364-37672383 | Msa1325470:intron | 60.0% | |
| CCTTCCTGAAGTCCAGACCG+CGG | - | chr8_4:37672846-37672865 | Msa1325470:CDS | 60.0% | |
| CCCACTGCTGCTGCATTTGG+AGG | - | chr8_4:37674967-37674986 | Msa1325470:CDS | 60.0% | |
| ! | GGTGCAATTGGTTCCGGGAC+CGG | - | chr8_4:37675030-37675049 | Msa1325470:CDS | 60.0% |
| CCGCGGTCTGGACTTCAGGA+AGG | + | chr8_4:37672849-37672868 | None:intergenic | 65.0% | |
| CTGTCCGCGGTCTGGACTTC+AGG | + | chr8_4:37672853-37672872 | None:intergenic | 65.0% | |
| CTGAAGTCCAGACCGCGGAC+AGG | - | chr8_4:37672851-37672870 | Msa1325470:CDS | 65.0% | |
| GCACTTTCCTGTCCGCGGTC+TGG | + | chr8_4:37672861-37672880 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 37672003 | 37675948 | 37672003 | ID=Msa1325470;Name=Msa1325470 |
| chr8_4 | mRNA | 37672003 | 37675948 | 37672003 | ID=Msa1325470-mRNA-1;Parent=Msa1325470;Name=Msa1325470-mRNA-1;_AED=0.09;_eAED=0.09;_QI=136|1|1|1|0.71|0.5|8|579|476 |
| chr8_4 | exon | 37672003 | 37672240 | 37672003 | ID=Msa1325470-mRNA-1:exon:11515;Parent=Msa1325470-mRNA-1 |
| chr8_4 | exon | 37672470 | 37673050 | 37672470 | ID=Msa1325470-mRNA-1:exon:11514;Parent=Msa1325470-mRNA-1 |
| chr8_4 | exon | 37673495 | 37673630 | 37673495 | ID=Msa1325470-mRNA-1:exon:11513;Parent=Msa1325470-mRNA-1 |
| chr8_4 | exon | 37673787 | 37673914 | 37673787 | ID=Msa1325470-mRNA-1:exon:11512;Parent=Msa1325470-mRNA-1 |
| chr8_4 | exon | 37674003 | 37674357 | 37674003 | ID=Msa1325470-mRNA-1:exon:11511;Parent=Msa1325470-mRNA-1 |
| chr8_4 | exon | 37674464 | 37674691 | 37674464 | ID=Msa1325470-mRNA-1:exon:11510;Parent=Msa1325470-mRNA-1 |
| chr8_4 | exon | 37674812 | 37675179 | 37674812 | ID=Msa1325470-mRNA-1:exon:11509;Parent=Msa1325470-mRNA-1 |
| chr8_4 | exon | 37675837 | 37675948 | 37675837 | ID=Msa1325470-mRNA-1:exon:11508;Parent=Msa1325470-mRNA-1 |
| chr8_4 | five_prime_UTR | 37675837 | 37675948 | 37675837 | ID=Msa1325470-mRNA-1:five_prime_utr;Parent=Msa1325470-mRNA-1 |
| chr8_4 | five_prime_UTR | 37675156 | 37675179 | 37675156 | ID=Msa1325470-mRNA-1:five_prime_utr;Parent=Msa1325470-mRNA-1 |
| chr8_4 | CDS | 37674812 | 37675155 | 37674812 | ID=Msa1325470-mRNA-1:cds;Parent=Msa1325470-mRNA-1 |
| chr8_4 | CDS | 37674464 | 37674691 | 37674464 | ID=Msa1325470-mRNA-1:cds;Parent=Msa1325470-mRNA-1 |
| chr8_4 | CDS | 37674003 | 37674357 | 37674003 | ID=Msa1325470-mRNA-1:cds;Parent=Msa1325470-mRNA-1 |
| chr8_4 | CDS | 37673787 | 37673914 | 37673787 | ID=Msa1325470-mRNA-1:cds;Parent=Msa1325470-mRNA-1 |
| chr8_4 | CDS | 37673495 | 37673630 | 37673495 | ID=Msa1325470-mRNA-1:cds;Parent=Msa1325470-mRNA-1 |
| chr8_4 | CDS | 37672811 | 37673050 | 37672811 | ID=Msa1325470-mRNA-1:cds;Parent=Msa1325470-mRNA-1 |
| chr8_4 | three_prime_UTR | 37672470 | 37672810 | 37672470 | ID=Msa1325470-mRNA-1:three_prime_utr;Parent=Msa1325470-mRNA-1 |
| chr8_4 | three_prime_UTR | 37672003 | 37672240 | 37672003 | ID=Msa1325470-mRNA-1:three_prime_utr;Parent=Msa1325470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
