AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0632430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0632430 MtrunA17_Chr4g0010281 92.481 665 8 2 1 665 1 623 0.0 1240
Msa0632430 MtrunA17_Chr4g0010291 83.759 665 64 3 1 665 1 621 0.0 1098
Msa0632430 MtrunA17_Chr7g0248971 64.643 560 147 6 112 663 81 597 0.0 727
Msa0632430 MtrunA17_Chr1g0201761 50.248 605 237 8 55 652 49 596 0.0 605
Msa0632430 MtrunA17_Chr0c19g0493781 62.079 356 81 4 320 663 3 316 1.08e-153 446
Msa0632430 MtrunA17_Chr7g0224211 91.071 168 15 0 498 665 58 225 3.94e-107 323
Msa0632430 MtrunA17_Chr0c19g0493791 65.877 211 68 2 112 319 81 290 1.76e-87 275
Msa0632430 MtrunA17_Chr7g0224201 93.617 47 3 0 398 444 27 73 5.55e-27 105
Msa0632430 MtrunA17_Chr2g0301441 24.070 511 309 15 182 638 9 494 1.05e-20 95.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0632430 AT3G07020.1 67.075 653 163 8 22 665 28 637 0.0 844
Msa0632430 AT3G07020.2 67.075 653 163 8 22 665 28 637 0.0 843
Msa0632430 AT3G07020.3 72.318 578 111 6 94 665 21 555 0.0 830
Msa0632430 AT1G43620.7 48.760 605 240 10 57 648 39 586 0.0 582
Msa0632430 AT1G43620.1 48.760 605 240 10 57 648 39 586 0.0 582
Msa0632430 AT1G43620.3 48.760 605 240 10 57 648 39 586 0.0 582
Msa0632430 AT1G43620.5 48.760 605 240 10 57 648 39 586 0.0 582
Msa0632430 AT1G43620.2 48.760 605 240 10 57 648 39 586 0.0 582
Msa0632430 AT1G43620.6 48.760 605 240 10 57 648 39 586 0.0 582
Msa0632430 AT1G43620.4 48.760 605 240 10 57 648 39 586 0.0 582
Msa0632430 AT1G43620.8 55.333 450 156 4 202 648 7 414 0.0 526
Msa0632430 AT5G24750.1 24.521 522 305 19 182 638 13 510 4.69e-20 94.7

Find 185 sgRNAs with CRISPR-Local

Find 693 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGATTGCATCTGCTTTAA+AGG 0.106875 4_3:+16400169 None:intergenic
CTTGGTGGTGCTTCCGTTTC+CGG 0.127395 4_3:+16404127 None:intergenic
GGGATCTAGCATAAAATTTA+TGG 0.155857 4_3:+16395847 None:intergenic
CACATTTACGCGCAGGATTA+TGG 0.195776 4_3:-16400848 Msa0632430:intron
AAATAGTCGACTCGTTAATT+TGG 0.198468 4_3:-16399520 Msa0632430:CDS
TAAATTCGTTGCACGGTTAT+AGG 0.211881 4_3:+16404287 None:intergenic
TATAACCGTGCAACGAATTT+AGG 0.222382 4_3:-16404285 Msa0632430:five_prime_UTR
CTTTCCAACTTAAACTTACT+TGG 0.226606 4_3:+16402289 None:intergenic
AAATTCGTTGCACGGTTATA+GGG 0.247547 4_3:+16404288 None:intergenic
AGCATCAGGTTCAACATCTA+TGG 0.265308 4_3:+16401695 None:intergenic
CGCAATAGGAAAACGCTTAC+AGG 0.271564 4_3:-16401541 Msa0632430:intron
TCAAATATAGCTAGATGTTT+TGG 0.284083 4_3:-16394825 Msa0632430:CDS
AATAACATTATTTACATGTT+TGG 0.295463 4_3:+16401659 None:intergenic
CTCCCGAGTCTCTTGTAAAA+TGG 0.296494 4_3:-16398013 Msa0632430:CDS
ATACATCCAGCAAGGACTTT+TGG 0.299091 4_3:+16400740 None:intergenic
ACATTCCTCATGCATATATA+TGG 0.304700 4_3:-16399403 Msa0632430:CDS
TAAAGCAACAAGCTGGTTAT+AGG 0.307719 4_3:-16399643 Msa0632430:CDS
GAAAGTAGTTCTTCAAAATC+AGG 0.312165 4_3:-16404050 Msa0632430:intron
TTCATTTGATTTCTCTGAAC+AGG 0.322157 4_3:+16400251 None:intergenic
CGCTTATGTTATTCTCGTGT+TGG 0.336050 4_3:+16397001 None:intergenic
AATAAAGGATGGGGAGGTCT+TGG 0.336180 4_3:-16396450 Msa0632430:CDS
GGATCAAAGTAACCACCTTT+TGG 0.338596 4_3:+16399359 None:intergenic
AAAATTCAAGATAATACTAT+TGG 0.339192 4_3:-16394503 Msa0632430:three_prime_UTR
CTTCCAGCTGCCCGAGAGTT+AGG 0.346753 4_3:+16397066 None:intergenic
ATGCCAAGTTGGTTTAGTTT+AGG 0.346975 4_3:-16394530 Msa0632430:three_prime_UTR
GAAAATGAGGATGGGGTAAC+TGG 0.354917 4_3:-16394927 Msa0632430:CDS
GAACCTGATGCTCTTGGTGC+TGG 0.371885 4_3:-16401684 Msa0632430:CDS
ATAAAGGATGGGGAGGTCTT+GGG 0.373464 4_3:-16396449 Msa0632430:CDS
ATGATTGCATCTGCTTTAAA+GGG 0.375168 4_3:+16400170 None:intergenic
GTACGACGCGCGCGAGATTC+CGG 0.376591 4_3:+16404253 None:intergenic
AATATGAATTGGAATTTGTA+AGG 0.391265 4_3:+16399880 None:intergenic
GGAAGCGAAAACTCGTCAAC+TGG 0.393586 4_3:+16395884 None:intergenic
AATGGAGTTTCTGCTATTAA+CGG 0.394394 4_3:-16404074 Msa0632430:CDS
TTACATTGGGTTTGGTAGCC+TGG 0.397683 4_3:-16397967 Msa0632430:intron
CGAATTTAGGTCGCATTCAC+CGG 0.401513 4_3:-16404272 Msa0632430:five_prime_UTR
GGCGATCCAAAAGTCCTTGC+TGG 0.401590 4_3:-16400746 Msa0632430:CDS
GTCGACTCGTTAATTTGGCT+TGG 0.402916 4_3:-16399515 Msa0632430:CDS
TAAAGAACCTGATATTGATT+CGG 0.403186 4_3:-16400198 Msa0632430:CDS
TTTATATGGTACGGAGTGTT+GGG 0.412743 4_3:-16397034 Msa0632430:CDS
TACTGGCAATGTGGTAACTT+TGG 0.413079 4_3:+16402345 None:intergenic
CAGAGAGGCATCATCAATAA+AGG 0.416569 4_3:-16396465 Msa0632430:CDS
GTCGTACACGACGGCGGAAA+TGG 0.420386 4_3:-16404237 Msa0632430:exon
TGACCAGCTTGCACTGGATC+AGG 0.421237 4_3:+16394797 None:intergenic
TAATAACAAAATTCCTGTAC+AGG 0.421966 4_3:-16402212 Msa0632430:CDS
AAGCCGATTTACATTGGGTT+TGG 0.425126 4_3:-16397975 Msa0632430:CDS
GGAGCAGGAACAACAGCTGC+AGG 0.428556 4_3:-16396090 Msa0632430:CDS
AAAATTTGTGCTGCATCCTC+AGG 0.433469 4_3:+16402235 None:intergenic
TGGATAATGTTCCCCATGAT+TGG 0.434419 4_3:-16396317 Msa0632430:CDS
CAAAATTCCTGTACAGGAAA+AGG 0.437724 4_3:-16402206 Msa0632430:intron
AATATAGTGATGCTTATTGT+TGG 0.439998 4_3:-16401591 Msa0632430:CDS
AAAGAACCTGATATTGATTC+GGG 0.440384 4_3:-16400197 Msa0632430:CDS
TGTCCTAACTCTCGGGCAGC+TGG 0.441983 4_3:-16397069 Msa0632430:CDS
GCGGTCTGACCAGCTTGCAC+TGG 0.445437 4_3:+16394791 None:intergenic
ATGTACTCTCTCACCCCAAA+AGG 0.446704 4_3:+16395934 None:intergenic
CTACCAAACCCAATGTAAAT+CGG 0.447578 4_3:+16397972 None:intergenic
AAAGGACTCTATATACTTGT+TGG 0.449349 4_3:-16396337 Msa0632430:CDS
TTGTAAGGCCTCTGCGACAT+GGG 0.451316 4_3:+16399895 None:intergenic
CTTAATTATAATCAACAAAA+CGG 0.454866 4_3:+16394556 None:intergenic
GGGACACCCGAATCAATATC+AGG 0.456903 4_3:+16400191 None:intergenic
GATCCAGCACCAAGAGCATC+AGG 0.457284 4_3:+16401681 None:intergenic
AACAAGTATATAGAGTCCTT+TGG 0.457917 4_3:+16396339 None:intergenic
GACAGCTCGGAAATATAGAT+TGG 0.458675 4_3:+16394741 None:intergenic
TTTATGGCATCAATCAACTT+AGG 0.459700 4_3:+16395863 None:intergenic
GTGACAAGCCGATTTACATT+GGG 0.467971 4_3:-16397980 Msa0632430:CDS
TATTTAGGCATTCCGAGCAC+GGG 0.468115 4_3:-16402373 Msa0632430:intron
ATCTTCTTCAAGCGAACGAT+CGG 0.468262 4_3:-16404174 Msa0632430:CDS
GTACAGCCATTTGTCGCAAT+AGG 0.469796 4_3:-16401555 Msa0632430:CDS
ACAAATAATTGTAGAAGCAC+TGG 0.471461 4_3:-16396499 Msa0632430:CDS
ATATTTGAGAAACAACTAGA+TGG 0.475374 4_3:+16394840 None:intergenic
AATAAGGGCTTTCTGCCATC+GGG 0.476853 4_3:-16400287 Msa0632430:CDS
CAGAGCGGCAGAGACATCTA+AGG 0.480999 4_3:-16402258 Msa0632430:CDS
GAGACATGATTAATGATCTT+CGG 0.484868 4_3:-16399487 Msa0632430:CDS
CTTTAAAGCAGATGCAATCA+TGG 0.486667 4_3:-16400168 Msa0632430:CDS
AAATAAGGGCTTTCTGCCAT+CGG 0.491934 4_3:-16400288 Msa0632430:CDS
ATAAGCATCACTATATTCAA+TGG 0.493905 4_3:+16401597 None:intergenic
CGGAAATGACATTGTTGCTA+GGG 0.494740 4_3:-16396975 Msa0632430:CDS
AGATGGCTCTGTGTTAGTCT+CGG 0.496643 4_3:+16394863 None:intergenic
CGGAATTGCCGCAGAATCGC+CGG 0.496687 4_3:-16404214 Msa0632430:CDS
TAATTAAGTGTATGCCAAGT+TGG 0.497356 4_3:-16394541 Msa0632430:three_prime_UTR
GTAAACATTATACCATATGC+TGG 0.499531 4_3:+16400137 None:intergenic
CATCTTGTTCCTAAACCAAA+AGG 0.500484 4_3:-16399374 Msa0632430:CDS
AAGTCCAAGTAAGTTTAAGT+TGG 0.500706 4_3:-16402293 Msa0632430:CDS
TGCCAAAGCTATGGAAAATG+AGG 0.501279 4_3:-16394940 Msa0632430:CDS
CGTGAAGTAGGTACCGGAAA+CGG 0.502557 4_3:-16404140 Msa0632430:CDS
GATGGCTCTGTGTTAGTCTC+GGG 0.503225 4_3:+16394864 None:intergenic
AGTACTATCCACAACTTCCT+TGG 0.508987 4_3:+16404109 None:intergenic
GTTAAAGTTGAGCGTGAAGT+AGG 0.509702 4_3:-16404152 Msa0632430:CDS
CGACCAGTCACATATTTAAG+TGG 0.511895 4_3:-16399446 Msa0632430:CDS
GGTGACAAGCCGATTTACAT+TGG 0.512372 4_3:-16397981 Msa0632430:CDS
TAGGTGCATCATGGAGGAGC+AGG 0.514132 4_3:-16396105 Msa0632430:CDS
GAAAACTCGTCAACTGGGAT+AGG 0.515281 4_3:+16395890 None:intergenic
TAAACATTATACCATATGCT+GGG 0.515523 4_3:+16400138 None:intergenic
TCTCCATGGGATACATCTAC+TGG 0.517942 4_3:+16402328 None:intergenic
GGTGAGAGAGTACATGATAG+AGG 0.520986 4_3:-16395926 Msa0632430:CDS
AAAAGCATTACACAGGTACA+AGG 0.521148 4_3:+16394632 None:intergenic
GTATTTAGGCATTCCGAGCA+CGG 0.521904 4_3:-16402374 Msa0632430:intron
TAAAGGATGGGGAGGTCTTG+GGG 0.523194 4_3:-16396448 Msa0632430:CDS
AAAAGTGTTGGAATAGTTTG+TGG 0.525102 4_3:+16404389 None:intergenic
TCGTCAACTGGGATAGGTGG+AGG 0.525360 4_3:+16395896 None:intergenic
CAAGTAAGTTTAAGTTGGAA+AGG 0.532012 4_3:-16402288 Msa0632430:CDS
CTTGTAAAATGGCTTGAAGA+TGG 0.533465 4_3:-16398002 Msa0632430:CDS
AAAGCAACAAGCTGGTTATA+GGG 0.535295 4_3:-16399642 Msa0632430:intron
TTTGTAAGGCCTCTGCGACA+TGG 0.537363 4_3:+16399894 None:intergenic
ATACCTAAACTAAACCAACT+TGG 0.538344 4_3:+16394527 None:intergenic
AACTCGTCAACTGGGATAGG+TGG 0.539725 4_3:+16395893 None:intergenic
TCAATGGAGGGATGTAATCA+AGG 0.541268 4_3:+16401613 None:intergenic
ACTTTGGACAACCCCGTGCT+CGG 0.542135 4_3:+16402361 None:intergenic
AGTACTGATTCTGTTTCCAA+TGG 0.543474 4_3:-16404092 Msa0632430:CDS
AGAGTACATGATAGAGGAGT+CGG 0.543698 4_3:-16395920 Msa0632430:CDS
AATAGTTTGTGGGGTGAAGA+AGG 0.548092 4_3:+16404400 None:intergenic
ATATCAGGTTCTTTACATGC+AGG 0.549794 4_3:+16400206 None:intergenic
GCGGAAATGACATTGTTGCT+AGG 0.551819 4_3:-16396976 Msa0632430:CDS
GTTAATAGCAGAAACTCCAT+TGG 0.552558 4_3:+16404076 None:intergenic
TGTACTCTCTCACCCCAAAA+GGG 0.555500 4_3:+16395935 None:intergenic
GCATCAGGTTCAACATCTAT+GGG 0.555937 4_3:+16401696 None:intergenic
GATGTTGAACCTGATGCTCT+TGG 0.556989 4_3:-16401690 Msa0632430:CDS
GAGGCATCATCAATAAAGGA+TGG 0.557400 4_3:-16396461 Msa0632430:CDS
AGGCATCATCAATAAAGGAT+GGG 0.559831 4_3:-16396460 Msa0632430:CDS
AATTGAACTTGCCAAAGCTA+TGG 0.566850 4_3:-16394949 Msa0632430:CDS
ACCTAGATTACTTACGTCCA+TGG 0.567184 4_3:+16399845 None:intergenic
AGCTATGGAAAATGAGGATG+GGG 0.568155 4_3:-16394934 Msa0632430:CDS
ATTCCTGATCCAGTGCAAGC+TGG 0.573829 4_3:-16394800 Msa0632430:exon
GAAGAACGCCGGCGATTCTG+CGG 0.575342 4_3:+16404206 None:intergenic
AAAGTGTTGGAATAGTTTGT+GGG 0.576811 4_3:+16404390 None:intergenic
ACTATCCACAACTTCCTTGG+TGG 0.576915 4_3:+16404112 None:intergenic
AAAGCTATGGAAAATGAGGA+TGG 0.580480 4_3:-16394936 Msa0632430:CDS
AATTCGTTGCACGGTTATAG+GGG 0.580592 4_3:+16404289 None:intergenic
GGCATCATCAATAAAGGATG+GGG 0.581975 4_3:-16396459 Msa0632430:CDS
ACATATTTAAGTGGCTCACA+AGG 0.582563 4_3:-16399437 Msa0632430:CDS
GTTGAGCGTGAAGTAGGTAC+CGG 0.583344 4_3:-16404146 Msa0632430:CDS
GGATGTGGAAAGTCAGCTGT+TGG 0.583601 4_3:+16399677 None:intergenic
TCTCGTGTAAAGCAACAAGC+TGG 0.588206 4_3:-16399650 Msa0632430:CDS
CTCTGAACAGGTATCTCAGA+GGG 0.588857 4_3:+16400263 None:intergenic
AAGCACCACCAAGGAAGTTG+TGG 0.596389 4_3:-16404117 Msa0632430:CDS
AAGCTATGGAAAATGAGGAT+GGG 0.596673 4_3:-16394935 Msa0632430:CDS
AGCATCACTATATTCAATGG+AGG 0.600366 4_3:+16401600 None:intergenic
TGCGACCTAAATTCGTTGCA+CGG 0.605297 4_3:+16404280 None:intergenic
TGTAGAAGCACTGGAAACCA+CGG 0.606828 4_3:-16396490 Msa0632430:CDS
TTTCCCAGTGACAGAACCAA+AGG 0.607256 4_3:-16396355 Msa0632430:intron
TCCGTACCATATAAAAGTGT+CGG 0.607778 4_3:+16397042 None:intergenic
CTTGTTCCTAAACCAAAAGG+TGG 0.608377 4_3:-16399371 Msa0632430:intron
GCATCACTATATTCAATGGA+GGG 0.608601 4_3:+16401601 None:intergenic
TGTTGCTTTACACGAGACAA+AGG 0.610672 4_3:+16399656 None:intergenic
GAGAAACAACTAGATGGAGA+TGG 0.612917 4_3:+16394846 None:intergenic
TTTACACGAGACAAAGGATG+TGG 0.614796 4_3:+16399662 None:intergenic
GAAGCGAAAACTCGTCAACT+GGG 0.615288 4_3:+16395885 None:intergenic
AAACATTATACCATATGCTG+GGG 0.620018 4_3:+16400139 None:intergenic
TTTGGTTTAGGAACAAGATG+AGG 0.623316 4_3:+16399377 None:intergenic
TGCTAATATTCTATGTGGTG+CGG 0.624936 4_3:+16404423 None:intergenic
ATCATCAATAAAGGATGGGG+AGG 0.625136 4_3:-16396456 Msa0632430:CDS
TGATTGCATCTGCTTTAAAG+GGG 0.630864 4_3:+16400171 None:intergenic
ATTTAGGCATTCCGAGCACG+GGG 0.632997 4_3:-16402372 Msa0632430:intron
CGTCAACTGGGATAGGTGGA+GGG 0.633125 4_3:+16395897 None:intergenic
GAGCAGGAACAACAGCTGCA+GGG 0.634133 4_3:-16396089 Msa0632430:CDS
ATTAGACCACATGTAGGTCA+TGG 0.635071 4_3:+16394579 None:intergenic
CTCGCGCGCGTCGTACACGA+CGG 0.635581 4_3:-16404246 Msa0632430:five_prime_UTR
GGTATCTCAGAGGGTCCCGA+TGG 0.637105 4_3:+16400272 None:intergenic
GATGATGCCTCTCTGTCCCG+TGG 0.637290 4_3:+16396473 None:intergenic
TTGCCAGTAGATGTATCCCA+TGG 0.638199 4_3:-16402331 Msa0632430:CDS
GTACACGACGGCGGAAATGG+CGG 0.638539 4_3:-16404234 Msa0632430:exon
ATATGGTACGGAGTGTTGGG+CGG 0.639417 4_3:-16397031 Msa0632430:CDS
ATGCTTATTGTTGGTACACG+AGG 0.640971 4_3:-16401582 Msa0632430:CDS
GAGCCACTTAAATATGTGAC+TGG 0.642352 4_3:+16399443 None:intergenic
GTAGAAGCACTGGAAACCAC+GGG 0.650496 4_3:-16396489 Msa0632430:CDS
AAAGAACAAAAGCATTACAC+AGG 0.650752 4_3:+16394625 None:intergenic
AAACGGATTAGACCACATGT+AGG 0.655643 4_3:+16394573 None:intergenic
ATGAACTTGAAGAAGAACGC+CGG 0.666057 4_3:+16404195 None:intergenic
AAAGCATTACACAGGTACAA+GGG 0.667107 4_3:+16394633 None:intergenic
CGTAGTACATACATCCAGCA+AGG 0.672886 4_3:+16400732 None:intergenic
CGGAAACGGAAGCACCACCA+AGG 0.673070 4_3:-16404126 Msa0632430:CDS
GGACTCCATATATATGCATG+AGG 0.673554 4_3:+16399398 None:intergenic
GGATACATCTACTGGCAATG+TGG 0.682659 4_3:+16402336 None:intergenic
AGGGCATACCCATGTCGCAG+AGG 0.684256 4_3:-16399903 Msa0632430:CDS
GAAGGTGCTAATATTCTATG+TGG 0.684453 4_3:+16404418 None:intergenic
GCAGAGACATCTAAGGCCTG+AGG 0.684529 4_3:-16402251 Msa0632430:CDS
GGAAATGACATTGTTGCTAG+GGG 0.687776 4_3:-16396974 Msa0632430:intron
GCGCGCGTCGTACACGACGG+CGG 0.692303 4_3:-16404243 Msa0632430:five_prime_UTR
AACATTATACCATATGCTGG+GGG 0.695947 4_3:+16400140 None:intergenic
AAGTGTTGGAATAGTTTGTG+GGG 0.705021 4_3:+16404391 None:intergenic
CTGGAAACCACGGGACAGAG+AGG 0.715104 4_3:-16396480 Msa0632430:CDS
TCTCTGAACAGGTATCTCAG+AGG 0.717964 4_3:+16400262 None:intergenic
CGAGAATAACATAAGCGTAG+CGG 0.727798 4_3:-16396995 Msa0632430:CDS
ATAGCTACCGTAAAAGACGA+CGG 0.733687 4_3:-16401738 Msa0632430:CDS
AATGTTATTGATGATTCACA+TGG 0.734188 4_3:-16401645 Msa0632430:CDS
GAGTTGCTAATCTAACACGA+TGG 0.756555 4_3:+16400825 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CCAATTAATTTTATAAATAT+CGG + chr4_3:16395357-16395376 None:intergenic 10.0%
!! CGATATTTATAAAATTAATT+GGG - chr4_3:16395355-16395374 Msa0632430:intron 10.0%
!! TATATATAATTTCTTTAATG+AGG - chr4_3:16395581-16395600 Msa0632430:intron 10.0%
!! TCTATTATATATAAAAAGTT+GGG + chr4_3:16395920-16395939 None:intergenic 10.0%
!! ATCTATTATATATAAAAAGT+TGG + chr4_3:16395921-16395940 None:intergenic 10.0%
!!! TAAATAAATTTATTTCTTCA+CGG + chr4_3:16396309-16396328 None:intergenic 10.0%
!!! TCAATTTTACTAAATTAATA+GGG + chr4_3:16396414-16396433 None:intergenic 10.0%
!!! ATCAATTTTACTAAATTAAT+AGG + chr4_3:16396415-16396434 None:intergenic 10.0%
!! GAATTATATTAAAATTCTAA+GGG + chr4_3:16396449-16396468 None:intergenic 10.0%
!! TGAATTATATTAAAATTCTA+AGG + chr4_3:16396450-16396469 None:intergenic 10.0%
!! AATAAATTATTTATATCTGT+TGG - chr4_3:16399766-16399785 Msa0632430:intron 10.0%
!!! TTAATAACTTATATTTTTTG+TGG - chr4_3:16402941-16402960 Msa0632430:intron 10.0%
!!! ATTAAATTTTTATTTACCTT+GGG + chr4_3:16403114-16403133 None:intergenic 10.0%
!!! AATTAAATTTTTATTTACCT+TGG + chr4_3:16403115-16403134 None:intergenic 10.0%
!!! ATGATTTTGTTTTTACTTTT+TGG - chr4_3:16395151-16395170 Msa0632430:intron 15.0%
!! CCGATATTTATAAAATTAAT+TGG - chr4_3:16395354-16395373 Msa0632430:intron 15.0%
!! AATTAATTGGGTAAAATTAA+CGG - chr4_3:16395367-16395386 Msa0632430:intron 15.0%
!! TTTCTTTCACTTATAATTTA+CGG + chr4_3:16395394-16395413 None:intergenic 15.0%
!!! TACAAATATTTAACACTTTT+AGG + chr4_3:16396843-16396862 None:intergenic 15.0%
!! TTAAATATTTGTATGTATGT+TGG - chr4_3:16396850-16396869 Msa0632430:intron 15.0%
!!! AGAATTTTTTATTTCAATTG+GGG + chr4_3:16396895-16396914 None:intergenic 15.0%
!!! GAGAATTTTTTATTTCAATT+GGG + chr4_3:16396896-16396915 None:intergenic 15.0%
!!! AGAGAATTTTTTATTTCAAT+TGG + chr4_3:16396897-16396916 None:intergenic 15.0%
!! TAATAATTTAACAAAAGCTA+TGG + chr4_3:16397075-16397094 None:intergenic 15.0%
!! ATTAAAAACAACAATAAAGA+TGG + chr4_3:16397153-16397172 None:intergenic 15.0%
!! AATAACATTATTTACATGTT+TGG + chr4_3:16397282-16397301 None:intergenic 15.0%
!! AACTATAAATATACTGTAAA+GGG + chr4_3:16397812-16397831 None:intergenic 15.0%
!! TATTATTGTTAACAAAATTG+AGG - chr4_3:16398059-16398078 Msa0632430:CDS 15.0%
!! ATTTGAGTAAAATCATATTA+CGG + chr4_3:16398567-16398586 None:intergenic 15.0%
!! ATCATAAAAGTAGAAAAAAT+AGG + chr4_3:16398945-16398964 None:intergenic 15.0%
!! ACTGTTAAATACTTAAAATA+GGG - chr4_3:16399016-16399035 Msa0632430:intron 15.0%
!! ATTGTGAAAAAAATATGAAT+TGG + chr4_3:16399072-16399091 None:intergenic 15.0%
!!! TTGTTTACTAATTTTTCTTT+TGG - chr4_3:16399159-16399178 Msa0632430:intron 15.0%
!!! TCTTTTGGTTATTTTAAAAT+TGG - chr4_3:16399174-16399193 Msa0632430:intron 15.0%
!! TATTGAATATTAATAGAGTT+TGG - chr4_3:16400161-16400180 Msa0632430:CDS 15.0%
!! ATTGAATATTAATAGAGTTT+GGG - chr4_3:16400162-16400181 Msa0632430:CDS 15.0%
!!! TTAAATATATAGTTGATATG+AGG + chr4_3:16400640-16400659 None:intergenic 15.0%
!! AAAAAACTAATAACAATGAA+GGG + chr4_3:16400737-16400756 None:intergenic 15.0%
!! TAAAAAACTAATAACAATGA+AGG + chr4_3:16400738-16400757 None:intergenic 15.0%
!!! TCATTGTTATTAGTTTTTTA+AGG - chr4_3:16400738-16400757 Msa0632430:intron 15.0%
!!! CATTGTTATTAGTTTTTTAA+GGG - chr4_3:16400739-16400758 Msa0632430:intron 15.0%
!!! TTATTTTTTTATTTGCAGAT+TGG - chr4_3:16400844-16400863 Msa0632430:intron 15.0%
!!! TATTTTTTTATTTGCAGATT+GGG - chr4_3:16400845-16400864 Msa0632430:intron 15.0%
!!! ATATGAATTTATACACATTT+TGG - chr4_3:16401348-16401367 Msa0632430:intron 15.0%
!! ATTTATAAATGGATATTGTT+TGG + chr4_3:16402016-16402035 None:intergenic 15.0%
!!! CTTAGTTCATTATTTTTTAA+AGG - chr4_3:16402691-16402710 Msa0632430:intron 15.0%
!! AAATGATATCATATTTACTA+GGG + chr4_3:16402911-16402930 None:intergenic 15.0%
!!! TATGTTTGAAACTTATTATT+TGG - chr4_3:16403779-16403798 Msa0632430:intron 15.0%
!!! ATTATTTGGTTTATATTTGT+TGG - chr4_3:16403793-16403812 Msa0632430:intron 15.0%
!! CTTAATTATAATCAACAAAA+CGG + chr4_3:16404385-16404404 None:intergenic 15.0%
!! AAAATTCAAGATAATACTAT+TGG - chr4_3:16404435-16404454 Msa0632430:five_prime_UTR 15.0%
!!! TTGTTTTTACTTTTTGGTTT+TGG - chr4_3:16395157-16395176 Msa0632430:intron 20.0%
!! CTTTCTTTCACTTATAATTT+AGG - chr4_3:16395393-16395412 Msa0632430:intron 20.0%
!! TGATACATTTGCTTATTTAA+CGG + chr4_3:16395453-16395472 None:intergenic 20.0%
!!! AATTAATTTTGGAAGAATGA+CGG - chr4_3:16395505-16395524 Msa0632430:intron 20.0%
!! ATTTGCCATTGTAAAAAAAA+CGG - chr4_3:16395752-16395771 Msa0632430:intron 20.0%
!! TTATATATAAAAAGTTGGGT+CGG + chr4_3:16395916-16395935 None:intergenic 20.0%
!! AACATGTTTATACATGATAA+TGG + chr4_3:16396087-16396106 None:intergenic 20.0%
!! AATATTATTATTTGCTTCAG+TGG - chr4_3:16396136-16396155 Msa0632430:intron 20.0%
!!! AAAAATTCTCTTGTTATGTT+TGG - chr4_3:16396906-16396925 Msa0632430:intron 20.0%
!! AAGGAAAAGAAAATAAGTTA+TGG + chr4_3:16397105-16397124 None:intergenic 20.0%
!! CAACTATAAATATACTGTAA+AGG + chr4_3:16397813-16397832 None:intergenic 20.0%
!!! TCATTAGTTTATAAGTTTGA+AGG + chr4_3:16397864-16397883 None:intergenic 20.0%
!! ATAAAAACTCAACTAAAGAT+GGG + chr4_3:16397946-16397965 None:intergenic 20.0%
!! AATAAAAACTCAACTAAAGA+TGG + chr4_3:16397947-16397966 None:intergenic 20.0%
!!! AACTATTTTCAACAACTTAT+TGG + chr4_3:16398445-16398464 None:intergenic 20.0%
!! AATAAGTTGTTGAAAATAGT+TGG - chr4_3:16398444-16398463 Msa0632430:intron 20.0%
!! ATAAGTTGTTGAAAATAGTT+GGG - chr4_3:16398445-16398464 Msa0632430:intron 20.0%
!! TTTACTCAAATCAAATGATA+TGG - chr4_3:16398576-16398595 Msa0632430:intron 20.0%
!! CACTGTTAAATACTTAAAAT+AGG - chr4_3:16399015-16399034 Msa0632430:intron 20.0%
!! AATATGAATTGGAATTTGTA+AGG + chr4_3:16399061-16399080 None:intergenic 20.0%
!! ATTAGTAAACAAAAGACTTA+AGG + chr4_3:16399151-16399170 None:intergenic 20.0%
!! GATCAATATGAAATCAAATA+TGG + chr4_3:16399372-16399391 None:intergenic 20.0%
!! AAATACAAAGTATGAACATT+GGG + chr4_3:16399603-16399622 None:intergenic 20.0%
!!! CATTGCTGTTTTTATAATTT+TGG - chr4_3:16399649-16399668 Msa0632430:CDS 20.0%
!!! AAAGTATTCTCCTAAATATA+TGG + chr4_3:16399798-16399817 None:intergenic 20.0%
!! ATTAGTGTTTACAACTTATA+TGG - chr4_3:16399897-16399916 Msa0632430:CDS 20.0%
!!! CAAATTTTCATGGAATAATA+AGG + chr4_3:16400121-16400140 None:intergenic 20.0%
!!! ATTTTTTTTTGCTACTGTTT+TGG - chr4_3:16400435-16400454 Msa0632430:intron 20.0%
!! CAACTATATATTTAACAAGT+TGG - chr4_3:16400645-16400664 Msa0632430:intron 20.0%
!!! ATTTTTTTATTTGCAGATTG+GGG - chr4_3:16400846-16400865 Msa0632430:intron 20.0%
!! ATATAACTAACCAAAAATGA+CGG + chr4_3:16401311-16401330 None:intergenic 20.0%
!!! CAAGTATCTTTAAGTTAATA+AGG + chr4_3:16401511-16401530 None:intergenic 20.0%
!!! TAGATGTTTTAGGATTATTA+CGG - chr4_3:16401761-16401780 Msa0632430:intron 20.0%
!! CCATATAAGTGATTTATAAA+TGG + chr4_3:16402027-16402046 None:intergenic 20.0%
!! CCATTTATAAATCACTTATA+TGG - chr4_3:16402024-16402043 Msa0632430:intron 20.0%
!! ATAAATCACTTATATGGATT+TGG - chr4_3:16402030-16402049 Msa0632430:intron 20.0%
!!! AGAGAAATTATTTGTTATGT+AGG + chr4_3:16402330-16402349 None:intergenic 20.0%
!! GTTAAGTATATATAAAGAGA+GGG + chr4_3:16402378-16402397 None:intergenic 20.0%
!! AGTTAAGTATATATAAAGAG+AGG + chr4_3:16402379-16402398 None:intergenic 20.0%
!!! ATTATTTGTGTCATCTTTTT+TGG + chr4_3:16402428-16402447 None:intergenic 20.0%
!!! TTTCTTAATGCATTTTTTGT+AGG - chr4_3:16402814-16402833 Msa0632430:intron 20.0%
!! CAAATGATATCATATTTACT+AGG + chr4_3:16402912-16402931 None:intergenic 20.0%
!! CTAGTAAATATGATATCATT+TGG - chr4_3:16402910-16402929 Msa0632430:intron 20.0%
!!! CTGATACACATAAAATTTTA+AGG + chr4_3:16403139-16403158 None:intergenic 20.0%
!!! TTATGTTAAAGTACTTTTGT+TGG + chr4_3:16403608-16403627 None:intergenic 20.0%
!! AATTGATCTTGTATAACTAA+TGG + chr4_3:16403747-16403766 None:intergenic 20.0%
!! ATACTATTGGATAAAAATCA+AGG - chr4_3:16404448-16404467 Msa0632430:five_prime_UTR 20.0%
!! ATCGAAAAAATGAAAAGTGT+TGG + chr4_3:16394564-16394583 None:intergenic 25.0%
! GTTAATGACGTGAAAAAATA+TGG - chr4_3:16395203-16395222 Msa0632430:intron 25.0%
! AATATCGGTATATACATCAT+TGG + chr4_3:16395342-16395361 None:intergenic 25.0%
!!! GTGTAAAGTAGTTTTACATT+AGG - chr4_3:16395624-16395643 Msa0632430:intron 25.0%
!!! TAAAGTAGTTTTACATTAGG+CGG - chr4_3:16395627-16395646 Msa0632430:intron 25.0%
! ATTCTCATATCTATGAGAAT+CGG + chr4_3:16395660-16395679 None:intergenic 25.0%
! TAGATATGAGAATGTTATGA+TGG - chr4_3:16395667-16395686 Msa0632430:intron 25.0%
! GATCATTAGAGAGAAAATTA+TGG - chr4_3:16395728-16395747 Msa0632430:intron 25.0%
!! AAAAACGGTAGTCTTTTATT+AGG - chr4_3:16395767-16395786 Msa0632430:intron 25.0%
!! ATTAGGTGGATTTATCATTA+AGG - chr4_3:16395784-16395803 Msa0632430:intron 25.0%
! TATATATAAAAAGTTGGGTC+GGG + chr4_3:16395915-16395934 None:intergenic 25.0%
! TCATGTATAAACATGTTCAA+TGG - chr4_3:16396090-16396109 Msa0632430:CDS 25.0%
! ATTAGGTACTTCTCTAATAA+AGG + chr4_3:16396179-16396198 None:intergenic 25.0%
!!! GTTCTAGAACGAAATTAATT+AGG + chr4_3:16396196-16396215 None:intergenic 25.0%
! ATTTATTTAAGAGAAACCAG+AGG - chr4_3:16396320-16396339 Msa0632430:CDS 25.0%
!! AATTAATAGGGTTTCACTTT+TGG + chr4_3:16396402-16396421 None:intergenic 25.0%
!! ATTAAAATTCTAAGGGAACA+TGG + chr4_3:16396442-16396461 None:intergenic 25.0%
!!! AATTTTAGCTCTAACTATGA+TGG - chr4_3:16396526-16396545 Msa0632430:CDS 25.0%
! TAATAACAAAATTCCTGTAC+AGG - chr4_3:16396726-16396745 Msa0632430:intron 25.0%
!! AATGTTATTGATGATTCACA+TGG - chr4_3:16397293-16397312 Msa0632430:intron 25.0%
! ATAAGCATCACTATATTCAA+TGG + chr4_3:16397344-16397363 None:intergenic 25.0%
! AATATAGTGATGCTTATTGT+TGG - chr4_3:16397347-16397366 Msa0632430:intron 25.0%
! TGAAAAGAGATATACATAAC+AGG + chr4_3:16397591-16397610 None:intergenic 25.0%
! TTGTTCTAATAAAAGCAACA+AGG + chr4_3:16397635-16397654 None:intergenic 25.0%
!!! TTGTTGCTTTTATTAGAACA+AGG - chr4_3:16397634-16397653 Msa0632430:intron 25.0%
! AAATGCAAAATTCCAACTAT+TGG + chr4_3:16397698-16397717 None:intergenic 25.0%
!!! ATATCATATGTTTTTGTCAG+AGG + chr4_3:16397998-16398017 None:intergenic 25.0%
!! AGCAACTCATTCAAATTTTA+AGG - chr4_3:16398128-16398147 Msa0632430:intron 25.0%
! ATATTTAATTGCTTAACCAC+TGG + chr4_3:16398392-16398411 None:intergenic 25.0%
! TGGTTAAGCAATTAAATATG+TGG - chr4_3:16398393-16398412 Msa0632430:intron 25.0%
! GGTTAAGCAATTAAATATGT+GGG - chr4_3:16398394-16398413 Msa0632430:intron 25.0%
!! TTTTTATGCTTTTGCAGATA+TGG - chr4_3:16398623-16398642 Msa0632430:intron 25.0%
! TGCAGATATGGTTAAAAATA+AGG - chr4_3:16398635-16398654 Msa0632430:intron 25.0%
! GCAGATATGGTTAAAAATAA+GGG - chr4_3:16398636-16398655 Msa0632430:intron 25.0%
!! TAAAGAACCTGATATTGATT+CGG - chr4_3:16398740-16398759 Msa0632430:intron 25.0%
! TAAACATTATACCATATGCT+GGG + chr4_3:16398803-16398822 None:intergenic 25.0%
! CATTTCTCATTTCTCATATT+AGG - chr4_3:16398885-16398904 Msa0632430:intron 25.0%
!!! TTCTACTTTTATGATGACAT+TGG - chr4_3:16398950-16398969 Msa0632430:intron 25.0%
!!! ATATTTTTTTCACAATGCCA+TGG - chr4_3:16399076-16399095 Msa0632430:intron 25.0%
! AAGACTTAAGGAAAATATGA+AGG + chr4_3:16399139-16399158 None:intergenic 25.0%
! GTCAGTTCATTAATTAAATC+TGG - chr4_3:16399318-16399337 Msa0632430:intron 25.0%
! CAAATACAAAGTATGAACAT+TGG + chr4_3:16399604-16399623 None:intergenic 25.0%
!!! TGAACATCACTATTTTTAAG+CGG - chr4_3:16399716-16399735 Msa0632430:intron 25.0%
!!! TTGGAAAGTACCATATATTT+AGG - chr4_3:16399785-16399804 Msa0632430:intron 25.0%
! AAGATGAAACTAAGATACAA+AGG + chr4_3:16399850-16399869 None:intergenic 25.0%
! TAAGTTGTAAACACTAATGA+GGG + chr4_3:16399895-16399914 None:intergenic 25.0%
! ATAAGTTGTAAACACTAATG+AGG + chr4_3:16399896-16399915 None:intergenic 25.0%
! ATGAAAATTTGTCTATGCTT+CGG - chr4_3:16400130-16400149 Msa0632430:intron 25.0%
! AATATTAATAGAGTTTGGGT+TGG - chr4_3:16400166-16400185 Msa0632430:CDS 25.0%
!! ATATTAATAGAGTTTGGGTT+GGG - chr4_3:16400167-16400186 Msa0632430:CDS 25.0%
!!! ATCTCATATCTTTTGAGATA+AGG + chr4_3:16400259-16400278 None:intergenic 25.0%
!! ACCTATTCTATCTAGAATTT+GGG - chr4_3:16400337-16400356 Msa0632430:intron 25.0%
! AGTAGCAAAAAAAAATGTTC+TGG + chr4_3:16400431-16400450 None:intergenic 25.0%
! TTCATAATCACTAATCTATG+AGG - chr4_3:16400613-16400632 Msa0632430:intron 25.0%
! ATTAACACATAGAAATCATG+TGG + chr4_3:16401032-16401051 None:intergenic 25.0%
! TATGTGTTAATGATAGATGT+AGG - chr4_3:16401041-16401060 Msa0632430:intron 25.0%
! TGATGATTACTTATTCTGAA+GGG + chr4_3:16401197-16401216 None:intergenic 25.0%
! ATGATGATTACTTATTCTGA+AGG + chr4_3:16401198-16401217 None:intergenic 25.0%
! TTCAGAATAAGTAATCATCA+TGG - chr4_3:16401197-16401216 Msa0632430:intron 25.0%
!!! TATACACATTTTGGTATAGT+AGG - chr4_3:16401357-16401376 Msa0632430:intron 25.0%
! CATTAAAAATGTCCAACTTT+GGG + chr4_3:16401482-16401501 None:intergenic 25.0%
! ACATTAAAAATGTCCAACTT+TGG + chr4_3:16401483-16401502 None:intergenic 25.0%
!! AGACTTTTCTGTAAATAAAG+AGG - chr4_3:16401655-16401674 Msa0632430:CDS 25.0%
!!! AATTTTGTGGTCTTTTTTGT+TGG - chr4_3:16401709-16401728 Msa0632430:CDS 25.0%
!!! AGATGTTTTAGGATTATTAC+GGG - chr4_3:16401762-16401781 Msa0632430:intron 25.0%
! ATAAATGGATATTGTTTGGT+CGG + chr4_3:16402012-16402031 None:intergenic 25.0%
! AACAACAACTTATGAAGAAA+TGG + chr4_3:16402070-16402089 None:intergenic 25.0%
! CGAAATATGATAGAACATTA+TGG - chr4_3:16402183-16402202 Msa0632430:intron 25.0%
! TTGTAAAAATAGCCAATCAT+GGG + chr4_3:16402636-16402655 None:intergenic 25.0%
! ATTGTAAAAATAGCCAATCA+TGG + chr4_3:16402637-16402656 None:intergenic 25.0%
!! ATTTTTACAATGTAAAGCAG+TGG - chr4_3:16402646-16402665 Msa0632430:intron 25.0%
! TATTTACTAGGGATTCAAAA+AGG + chr4_3:16402900-16402919 None:intergenic 25.0%
!!! CATAAGCTTGTTGTATATAA+GGG + chr4_3:16403277-16403296 None:intergenic 25.0%
!!! TCATAAGCTTGTTGTATATA+AGG + chr4_3:16403278-16403297 None:intergenic 25.0%
!! GCTTACACATATATTTGTTT+TGG + chr4_3:16403350-16403369 None:intergenic 25.0%
! TAAGCTATACATCTATTCTA+TGG - chr4_3:16403365-16403384 Msa0632430:intron 25.0%
! AAGCTATACATCTATTCTAT+GGG - chr4_3:16403366-16403385 Msa0632430:intron 25.0%
!!! TCTCAATTGGAGTATTTTTA+GGG + chr4_3:16403545-16403564 None:intergenic 25.0%
!! TTTGGTTTATATTTGTTGGA+TGG - chr4_3:16403797-16403816 Msa0632430:intron 25.0%
!! TTGGTTTATATTTGTTGGAT+GGG - chr4_3:16403798-16403817 Msa0632430:intron 25.0%
! ATATTTGAGAAACAACTAGA+TGG + chr4_3:16404101-16404120 None:intergenic 25.0%
!! TCAAATATAGCTAGATGTTT+TGG - chr4_3:16404113-16404132 Msa0632430:CDS 25.0%
! TGTACATAGAGATTGAAAAA+CGG + chr4_3:16404175-16404194 None:intergenic 25.0%
!! AAAGTGTTGGAATAGTTTGT+GGG + chr4_3:16394551-16394570 None:intergenic 30.0%
!! AAAAGTGTTGGAATAGTTTG+TGG + chr4_3:16394552-16394571 None:intergenic 30.0%
AATGGAGTTTCTGCTATTAA+CGG - chr4_3:16394864-16394883 Msa0632430:CDS 30.0%
GAAAGTAGTTCTTCAAAATC+AGG - chr4_3:16394888-16394907 Msa0632430:CDS 30.0%
ACACTTCAAAACTTATCTTG+TGG + chr4_3:16395230-16395249 None:intergenic 30.0%
AGCAAATGTATCATGTATTG+CGG - chr4_3:16395460-16395479 Msa0632430:intron 30.0%
!! AAAGTAGTTTTACATTAGGC+GGG - chr4_3:16395628-16395647 Msa0632430:intron 30.0%
GTGATTACATAAGTCAATAC+AGG - chr4_3:16395694-16395713 Msa0632430:intron 30.0%
!!! GACTACCGTTTTTTTTACAA+TGG + chr4_3:16395760-16395779 None:intergenic 30.0%
ATTAAGGTGAAGTGAATTCT+TGG - chr4_3:16395800-16395819 Msa0632430:intron 30.0%
!!! TGTCTTTTTTCTCACTTTGA+TGG + chr4_3:16395950-16395969 None:intergenic 30.0%
AAGTGAGAAAAAAGACACTA+AGG - chr4_3:16395953-16395972 Msa0632430:CDS 30.0%
AGAAGAAATGTCAAGATCAT+AGG + chr4_3:16396224-16396243 None:intergenic 30.0%
!! TTTGTTTTCTGCCTGTATTT+AGG - chr4_3:16396550-16396569 Msa0632430:intron 30.0%
! TGACTCTATTTTATCTCCAT+GGG + chr4_3:16396626-16396645 None:intergenic 30.0%
! TTGACTCTATTTTATCTCCA+TGG + chr4_3:16396627-16396646 None:intergenic 30.0%
AAGTCCAAGTAAGTTTAAGT+TGG - chr4_3:16396645-16396664 Msa0632430:intron 30.0%
CTTTCCAACTTAAACTTACT+TGG + chr4_3:16396652-16396671 None:intergenic 30.0%
!! CAAGTAAGTTTAAGTTGGAA+AGG - chr4_3:16396650-16396669 Msa0632430:intron 30.0%
! ATTCTCTTGTTATGTTTGGA+TGG - chr4_3:16396910-16396929 Msa0632430:intron 30.0%
ATGGTGATAAAACTTTGAGT+GGG + chr4_3:16397056-16397075 None:intergenic 30.0%
TATGGTGATAAAACTTTGAG+TGG + chr4_3:16397057-16397076 None:intergenic 30.0%
TGGTCAGTAGAAACAAATAA+AGG + chr4_3:16397124-16397143 None:intergenic 30.0%
! AACAATAAAGATGGTGATGA+TGG + chr4_3:16397144-16397163 None:intergenic 30.0%
AATGTGATGTATGGTCTTTA+TGG - chr4_3:16397497-16397516 Msa0632430:intron 30.0%
TTCCAACTATTGGACTAATT+GGG + chr4_3:16397688-16397707 None:intergenic 30.0%
ATTCCAACTATTGGACTAAT+TGG + chr4_3:16397689-16397708 None:intergenic 30.0%
!!! GTAATAACTTTGAGGCTTTT+TGG - chr4_3:16397778-16397797 Msa0632430:intron 30.0%
!!! TGCTGTATTTTAAGTTAGCT+TGG - chr4_3:16397915-16397934 Msa0632430:intron 30.0%
TTCTTCTTCTAGTGTTTGAT+TGG - chr4_3:16398243-16398262 Msa0632430:intron 30.0%
!! AACACATTGGAGAGTATTAT+TGG + chr4_3:16398301-16398320 None:intergenic 30.0%
!! TCTCCAATGTGTTTTTGTTT+GGG - chr4_3:16398308-16398327 Msa0632430:intron 30.0%
TTTCCCAAACAAAAACACAT+TGG + chr4_3:16398314-16398333 None:intergenic 30.0%
!! TGTGTTTTTGTTTGGGAAAA+TGG - chr4_3:16398315-16398334 Msa0632430:intron 30.0%
!! TTTTTGTTTGGGAAAATGGT+AGG - chr4_3:16398319-16398338 Msa0632430:intron 30.0%
GTTAGAAATATTAACTCCAG+TGG - chr4_3:16398373-16398392 Msa0632430:intron 30.0%
AATCATATTACGGAGTTGTA+GGG + chr4_3:16398557-16398576 None:intergenic 30.0%
AAATCATATTACGGAGTTGT+AGG + chr4_3:16398558-16398577 None:intergenic 30.0%
! TTCATTTGATTTCTCTGAAC+AGG + chr4_3:16398690-16398709 None:intergenic 30.0%
!! AAAGAACCTGATATTGATTC+GGG - chr4_3:16398741-16398760 Msa0632430:intron 30.0%
! ATGATTGCATCTGCTTTAAA+GGG + chr4_3:16398771-16398790 None:intergenic 30.0%
AAACATTATACCATATGCTG+GGG + chr4_3:16398802-16398821 None:intergenic 30.0%
GTAAACATTATACCATATGC+TGG + chr4_3:16398804-16398823 None:intergenic 30.0%
ACAATGAACTTCAATCACAA+GGG + chr4_3:16399216-16399235 None:intergenic 30.0%
TACAATGAACTTCAATCACA+AGG + chr4_3:16399217-16399236 None:intergenic 30.0%
!! GTATTTTATCTTTTTCACCC+AGG - chr4_3:16399238-16399257 Msa0632430:intron 30.0%
TATGGTTGCAAAAAATTAGC+TGG + chr4_3:16399354-16399373 None:intergenic 30.0%
!! AAATAGTCGACTCGTTAATT+TGG - chr4_3:16399418-16399437 Msa0632430:CDS 30.0%
GAGACATGATTAATGATCTT+CGG - chr4_3:16399451-16399470 Msa0632430:CDS 30.0%
ACATTCCTCATGCATATATA+TGG - chr4_3:16399535-16399554 Msa0632430:intron 30.0%
AAAACCAGATTATAAGGTGA+AGG + chr4_3:16399932-16399951 None:intergenic 30.0%
CTCAACAAAACCAGATTATA+AGG + chr4_3:16399938-16399957 None:intergenic 30.0%
! GAAGCATAGACAAATTTTCA+TGG + chr4_3:16400131-16400150 None:intergenic 30.0%
TGAACATAAGTTTACAAGTG+GGG + chr4_3:16400234-16400253 None:intergenic 30.0%
CTGAACATAAGTTTACAAGT+GGG + chr4_3:16400235-16400254 None:intergenic 30.0%
TCTGAACATAAGTTTACAAG+TGG + chr4_3:16400236-16400255 None:intergenic 30.0%
! GACCTATTCTATCTAGAATT+TGG - chr4_3:16400336-16400355 Msa0632430:intron 30.0%
ACCCAAATTCTAGATAGAAT+AGG + chr4_3:16400341-16400360 None:intergenic 30.0%
AACCACTAATGAGTTTATAC+AGG + chr4_3:16400549-16400568 None:intergenic 30.0%
GACCAAAAATTGATGTAGTA+GGG - chr4_3:16400868-16400887 Msa0632430:intron 30.0%
! AACCCTACTACATCAATTTT+TGG + chr4_3:16400873-16400892 None:intergenic 30.0%
! AAGTAATCATCATGGCTTTT+TGG - chr4_3:16401205-16401224 Msa0632430:intron 30.0%
! AACCAAAAATGACGGAAAAA+GGG + chr4_3:16401303-16401322 None:intergenic 30.0%
! TAACCAAAAATGACGGAAAA+AGG + chr4_3:16401304-16401323 None:intergenic 30.0%
GGTGTATTACAGATTAAGAA+TGG + chr4_3:16401551-16401570 None:intergenic 30.0%
ATAAAGAGGTTAAGATTCTG+TGG - chr4_3:16401669-16401688 Msa0632430:CDS 30.0%
! TCAGGATGTTTAGATGTTTT+AGG - chr4_3:16401751-16401770 Msa0632430:CDS 30.0%
AACTTATGAAGAAATGGTCA+TGG + chr4_3:16402064-16402083 None:intergenic 30.0%
!! AGTTTTTGATTGTCAGTTTC+TGG - chr4_3:16402111-16402130 Msa0632430:intron 30.0%
! TTATTGTAGTTTTCTTGTCG+AGG - chr4_3:16402259-16402278 Msa0632430:CDS 30.0%
AGTATATATAAAGAGAGGGA+GGG + chr4_3:16402374-16402393 None:intergenic 30.0%
AAGTATATATAAAGAGAGGG+AGG + chr4_3:16402375-16402394 None:intergenic 30.0%
!!! ATCTTTTTTGGATCTTGAAC+AGG + chr4_3:16402416-16402435 None:intergenic 30.0%
! ACAAATAATTGTAGAAGCAC+TGG - chr4_3:16402439-16402458 Msa0632430:intron 30.0%
AACAAGTATATAGAGTCCTT+TGG + chr4_3:16402602-16402621 None:intergenic 30.0%
AAAGGACTCTATATACTTGT+TGG - chr4_3:16402601-16402620 Msa0632430:intron 30.0%
TGTAAAAATAGCCAATCATG+GGG + chr4_3:16402635-16402654 None:intergenic 30.0%
ATCACCAAAAAAAGGAACTA+TGG + chr4_3:16402980-16402999 None:intergenic 30.0%
TTTATGGCATCAATCAACTT+AGG + chr4_3:16403078-16403097 None:intergenic 30.0%
GGGATCTAGCATAAAATTTA+TGG + chr4_3:16403094-16403113 None:intergenic 30.0%
! AAATTTTATGCTAGATCCCA+AGG - chr4_3:16403095-16403114 Msa0632430:intron 30.0%
TGAGATGAAATTCAGTAGTT+TGG + chr4_3:16403311-16403330 None:intergenic 30.0%
CAAAGACTTCTGACAAATTT+GGG - chr4_3:16403490-16403509 Msa0632430:intron 30.0%
TGACAAATTTGGGTAAAACA+AGG - chr4_3:16403500-16403519 Msa0632430:intron 30.0%
!! CTCTCAATTGGAGTATTTTT+AGG + chr4_3:16403546-16403565 None:intergenic 30.0%
AAAAATACTCCAATTGAGAG+TGG - chr4_3:16403546-16403565 Msa0632430:intron 30.0%
!! TTTCAATGCTGATTTGTCAT+GGG + chr4_3:16403581-16403600 None:intergenic 30.0%
!! ATTTCAATGCTGATTTGTCA+TGG + chr4_3:16403582-16403601 None:intergenic 30.0%
AAATCTACTGCAAGATAGAA+AGG + chr4_3:16403657-16403676 None:intergenic 30.0%
! TTGCAGTAGATTTTCTACAA+AGG - chr4_3:16403664-16403683 Msa0632430:intron 30.0%
!! GGTTTTATATTTACATTGCG+TGG - chr4_3:16403837-16403856 Msa0632430:intron 30.0%
!! AAAGAACAAAAGCATTACAC+AGG + chr4_3:16404316-16404335 None:intergenic 30.0%
TAATTAAGTGTATGCCAAGT+TGG - chr4_3:16404397-16404416 Msa0632430:five_prime_UTR 30.0%
ATACCTAAACTAAACCAACT+TGG + chr4_3:16404414-16404433 None:intergenic 30.0%
TGCTAATATTCTATGTGGTG+CGG + chr4_3:16394518-16394537 None:intergenic 35.0%
!! GAAGGTGCTAATATTCTATG+TGG + chr4_3:16394523-16394542 None:intergenic 35.0%
!! AAGTGTTGGAATAGTTTGTG+GGG + chr4_3:16394550-16394569 None:intergenic 35.0%
AAATTCGTTGCACGGTTATA+GGG + chr4_3:16394653-16394672 None:intergenic 35.0%
TAAATTCGTTGCACGGTTAT+AGG + chr4_3:16394654-16394673 None:intergenic 35.0%
TATAACCGTGCAACGAATTT+AGG - chr4_3:16394653-16394672 Msa0632430:three_prime_UTR 35.0%
!! AGTACTGATTCTGTTTCCAA+TGG - chr4_3:16394846-16394865 Msa0632430:CDS 35.0%
GTTAATAGCAGAAACTCCAT+TGG + chr4_3:16394865-16394884 None:intergenic 35.0%
GCAAATGTATCATGTATTGC+GGG - chr4_3:16395461-16395480 Msa0632430:intron 35.0%
!!! GTTTGTCTGCTTTTTCTATG+AGG - chr4_3:16395552-16395571 Msa0632430:intron 35.0%
! AACGGTAGTCTTTTATTAGG+TGG - chr4_3:16395770-16395789 Msa0632430:intron 35.0%
AATTTGCATGTCCACCAAAA+TGG - chr4_3:16395978-16395997 Msa0632430:intron 35.0%
ATTTCTTCTGCAACATAAGC+TGG - chr4_3:16396235-16396254 Msa0632430:intron 35.0%
TACGAAAAACTCATTAGCTG+AGG - chr4_3:16396351-16396370 Msa0632430:intron 35.0%
CAAAATTCCTGTACAGGAAA+AGG - chr4_3:16396732-16396751 Msa0632430:intron 35.0%
AGACATAAGGGGAAAACAAA+AGG + chr4_3:16396788-16396807 None:intergenic 35.0%
ACATGTTTCCACAGACATAA+GGG + chr4_3:16396800-16396819 None:intergenic 35.0%
TCTGTGGAAACATGTCTATA+TGG - chr4_3:16396805-16396824 Msa0632430:intron 35.0%
GCATCACTATATTCAATGGA+GGG + chr4_3:16397340-16397359 None:intergenic 35.0%
AGCATCACTATATTCAATGG+AGG + chr4_3:16397341-16397360 None:intergenic 35.0%
AACGCTTACAGGTATAGTAA+TGG - chr4_3:16397408-16397427 Msa0632430:intron 35.0%
GAAGGACGAAAAGAGATATT+TGG + chr4_3:16397450-16397469 None:intergenic 35.0%
ATCCCAATTAGTCCAATAGT+TGG - chr4_3:16397683-16397702 Msa0632430:intron 35.0%
CTCTTGACGTAATAACTTTG+AGG - chr4_3:16397770-16397789 Msa0632430:intron 35.0%
TAGAAGAAGAAACTGCAGTT+GGG + chr4_3:16398234-16398253 None:intergenic 35.0%
!! CTCTCCAATGTGTTTTTGTT+TGG - chr4_3:16398307-16398326 Msa0632430:intron 35.0%
! TTTGCAAGCACACATTTTTG+TGG - chr4_3:16398351-16398370 Msa0632430:intron 35.0%
TAAAAATGTGCTGTGTGTCA+TGG - chr4_3:16398489-16398508 Msa0632430:intron 35.0%
ATATCAGGTTCTTTACATGC+AGG + chr4_3:16398735-16398754 None:intergenic 35.0%
!! TGATTGCATCTGCTTTAAAG+GGG + chr4_3:16398770-16398789 None:intergenic 35.0%
CATGATTGCATCTGCTTTAA+AGG + chr4_3:16398772-16398791 None:intergenic 35.0%
!! CTTTAAAGCAGATGCAATCA+TGG - chr4_3:16398770-16398789 Msa0632430:intron 35.0%
AACATTATACCATATGCTGG+GGG + chr4_3:16398801-16398820 None:intergenic 35.0%
ATCTCTTTCACATTTCTTGC+TGG - chr4_3:16398914-16398933 Msa0632430:intron 35.0%
AGTGTCAGTAGCAAAAACAA+TGG + chr4_3:16398999-16399018 None:intergenic 35.0%
CAATGAACTTCAATCACAAG+GGG + chr4_3:16399215-16399234 None:intergenic 35.0%
TAAAGCAACAAGCTGGTTAT+AGG - chr4_3:16399295-16399314 Msa0632430:intron 35.0%
AAAGCAACAAGCTGGTTATA+GGG - chr4_3:16399296-16399315 Msa0632430:intron 35.0%
ACATATTTAAGTGGCTCACA+AGG - chr4_3:16399501-16399520 Msa0632430:CDS 35.0%
! TTTGGTTTAGGAACAAGATG+AGG + chr4_3:16399564-16399583 None:intergenic 35.0%
CATCTTGTTCCTAAACCAAA+AGG - chr4_3:16399564-16399583 Msa0632430:intron 35.0%
!!! AAGTAACCACCTTTTGGTTT+AGG + chr4_3:16399576-16399595 None:intergenic 35.0%
ACAACCTTCACCTTATAATC+TGG - chr4_3:16399925-16399944 Msa0632430:intron 35.0%
! AGTCTATCCTCGATTTGTAT+TGG - chr4_3:16399991-16400010 Msa0632430:intron 35.0%
! GTCTATCCTCGATTTGTATT+GGG - chr4_3:16399992-16400011 Msa0632430:intron 35.0%
TCTTAAGCATGGAGAAATGT+GGG + chr4_3:16400063-16400082 None:intergenic 35.0%
! TCCTACTAAACTAGCTTGTA+AGG - chr4_3:16400199-16400218 Msa0632430:CDS 35.0%
! ACCTTACAAGCTAGTTTAGT+AGG + chr4_3:16400203-16400222 None:intergenic 35.0%
ATTACTGTGTTTGTGTCTCA+AGG - chr4_3:16400464-16400483 Msa0632430:intron 35.0%
AGCCTGTATAAACTCATTAG+TGG - chr4_3:16400544-16400563 Msa0632430:intron 35.0%
TAAACTCATTAGTGGTTGAC+TGG - chr4_3:16400552-16400571 Msa0632430:intron 35.0%
AATGCATATACTTCAGCTTG+AGG - chr4_3:16400676-16400695 Msa0632430:intron 35.0%
ATGCATATACTTCAGCTTGA+GGG - chr4_3:16400677-16400696 Msa0632430:intron 35.0%
GGACCAAAAATTGATGTAGT+AGG - chr4_3:16400867-16400886 Msa0632430:intron 35.0%
!! AAGCCATTTTACAAGAGACT+CGG + chr4_3:16400931-16400950 None:intergenic 35.0%
CTTGTAAAATGGCTTGAAGA+TGG - chr4_3:16400936-16400955 Msa0632430:intron 35.0%
CTACCAAACCCAATGTAAAT+CGG + chr4_3:16400969-16400988 None:intergenic 35.0%
TGCAAATAAATACACTCACC+AGG + chr4_3:16400992-16401011 None:intergenic 35.0%
TGTAGTCAATAGCATGCTAT+AGG - chr4_3:16401079-16401098 Msa0632430:intron 35.0%
! TAGCATGCTATAGGCTTTAT+CGG - chr4_3:16401088-16401107 Msa0632430:intron 35.0%
TAGACAATAGTAGAGTGGTT+TGG - chr4_3:16401128-16401147 Msa0632430:intron 35.0%
!! ACTTATTCTGAAGGGCTTTT+TGG + chr4_3:16401189-16401208 None:intergenic 35.0%
!! AATCATCATGGCTTTTTGGT+TGG - chr4_3:16401209-16401228 Msa0632430:intron 35.0%
!!! ATCATCATGGCTTTTTGGTT+GGG - chr4_3:16401210-16401229 Msa0632430:intron 35.0%
!!! CTTTTTGGTTGGGGTATTTT+AGG - chr4_3:16401220-16401239 Msa0632430:intron 35.0%
AAAAACACCAAAGCAGTTCT+AGG - chr4_3:16401256-16401275 Msa0632430:intron 35.0%
AAAACACCAAAGCAGTTCTA+GGG - chr4_3:16401257-16401276 Msa0632430:intron 35.0%
GCAAGCAAACAATGAAAAGT+AGG + chr4_3:16401572-16401591 None:intergenic 35.0%
CAAGTCTGTTAGTTGTTGAT+GGG - chr4_3:16401604-16401623 Msa0632430:CDS 35.0%
!! TAGTTGTTGATGGGCTATAT+CGG - chr4_3:16401613-16401632 Msa0632430:CDS 35.0%
! GTGCTAAGTTCACAATTTTG+TGG - chr4_3:16401696-16401715 Msa0632430:CDS 35.0%
!!! TTTGTGGTCTTTTTTGTTGG+AGG - chr4_3:16401712-16401731 Msa0632430:CDS 35.0%
!!! GTTTTAGGATTATTACGGGA+AGG - chr4_3:16401766-16401785 Msa0632430:intron 35.0%
TAAAGATCCTCACATCTCTT+TGG - chr4_3:16401791-16401810 Msa0632430:intron 35.0%
! AAGCCTTATCCCATTAAGTA+GGG + chr4_3:16401826-16401845 None:intergenic 35.0%
! AGTTTTCTTGTCCTAACTCT+CGG - chr4_3:16401861-16401880 Msa0632430:intron 35.0%
! ACCGACACTTTTATATGGTA+CGG - chr4_3:16401895-16401914 Msa0632430:intron 35.0%
! TCCGTACCATATAAAAGTGT+CGG + chr4_3:16401899-16401918 None:intergenic 35.0%
! TTTTATATGGTACGGAGTGT+TGG - chr4_3:16401903-16401922 Msa0632430:intron 35.0%
! TTTATATGGTACGGAGTGTT+GGG - chr4_3:16401904-16401923 Msa0632430:intron 35.0%
AACTACAATAACGACAACCA+AGG + chr4_3:16402250-16402269 None:intergenic 35.0%
AGATATACAAAAGCAAGGAG+AGG + chr4_3:16402290-16402309 None:intergenic 35.0%
GCAAGAGATATACAAAAGCA+AGG + chr4_3:16402295-16402314 None:intergenic 35.0%
TATATATAAAGAGAGGGAGG+GGG + chr4_3:16402372-16402391 None:intergenic 35.0%
GTATATATAAAGAGAGGGAG+GGG + chr4_3:16402373-16402392 None:intergenic 35.0%
AGGCATCATCAATAAAGGAT+GGG - chr4_3:16402478-16402497 Msa0632430:intron 35.0%
!!! CATTTTTTGTAGGTGCATCA+TGG - chr4_3:16402824-16402843 Msa0632430:intron 35.0%
AAAAAGGAACTATGGTCGTT+GGG + chr4_3:16402972-16402991 None:intergenic 35.0%
AAAAAAGGAACTATGGTCGT+TGG + chr4_3:16402973-16402992 None:intergenic 35.0%
!!! ACGACCATAGTTCCTTTTTT+TGG - chr4_3:16402973-16402992 Msa0632430:intron 35.0%
! AAGGGTTGATCACCAAAAAA+AGG + chr4_3:16402988-16403007 None:intergenic 35.0%
!! TTTTTGGTGATCAACCCTTT+TGG - chr4_3:16402989-16403008 Msa0632430:intron 35.0%
!! TTTTGGTGATCAACCCTTTT+GGG - chr4_3:16402990-16403009 Msa0632430:intron 35.0%
TGTGTATCAGCCAAATGAAA+CGG - chr4_3:16403149-16403168 Msa0632430:intron 35.0%
GCTTCTTTCAGAAGTAGATT+CGG - chr4_3:16403176-16403195 Msa0632430:intron 35.0%
AGATTCGGAGGATAAATTTC+TGG - chr4_3:16403191-16403210 Msa0632430:intron 35.0%
ACATCTATTCTATGGGCATT+AGG - chr4_3:16403373-16403392 Msa0632430:intron 35.0%
TTGTCAGAAGTCTTTGGATT+AGG + chr4_3:16403486-16403505 None:intergenic 35.0%
CCAAATTTGTCAGAAGTCTT+TGG + chr4_3:16403492-16403511 None:intergenic 35.0%
CCAAAGACTTCTGACAAATT+TGG - chr4_3:16403489-16403508 Msa0632430:intron 35.0%
!!! TGGAGTATTTTTAGGGTATG+TGG + chr4_3:16403538-16403557 None:intergenic 35.0%
AGAAAGGTAAAGTGACAACA+GGG + chr4_3:16403641-16403660 None:intergenic 35.0%
TAGAAAGGTAAAGTGACAAC+AGG + chr4_3:16403642-16403661 None:intergenic 35.0%
CTTGTTGAAGCTGCAATAAT+TGG - chr4_3:16403720-16403739 Msa0632430:intron 35.0%
! ATGGGCTGATGTATTTAGAT+AGG - chr4_3:16403816-16403835 Msa0632430:intron 35.0%
! GGTTTACACCTCAAATTTTG+AGG + chr4_3:16403863-16403882 None:intergenic 35.0%
! GTGTAAACCAATCTCAGTTT+TGG - chr4_3:16403874-16403893 Msa0632430:intron 35.0%
AATGCAACCAAAACTGAGAT+TGG + chr4_3:16403884-16403903 None:intergenic 35.0%
!!! GTTTTGGTTGCATTCTTTCT+TGG - chr4_3:16403890-16403909 Msa0632430:intron 35.0%
!! CATTCTTTCTTGGTTCTGTT+TGG - chr4_3:16403900-16403919 Msa0632430:intron 35.0%
TAACTGCTCATCATACTTCT+AGG - chr4_3:16403953-16403972 Msa0632430:intron 35.0%
CTCATCATACTTCTAGGTAA+AGG - chr4_3:16403959-16403978 Msa0632430:intron 35.0%
AATTGAACTTGCCAAAGCTA+TGG - chr4_3:16403989-16404008 Msa0632430:intron 35.0%
! ATCCTCATTTTCCATAGCTT+TGG + chr4_3:16404003-16404022 None:intergenic 35.0%
AAAGCTATGGAAAATGAGGA+TGG - chr4_3:16404002-16404021 Msa0632430:intron 35.0%
AAGCTATGGAAAATGAGGAT+GGG - chr4_3:16404003-16404022 Msa0632430:intron 35.0%
ACATAGAGATTGAAAAACGG+TGG + chr4_3:16404172-16404191 None:intergenic 35.0%
! AAAGCATTACACAGGTACAA+GGG + chr4_3:16404308-16404327 None:intergenic 35.0%
!! AAAAGCATTACACAGGTACA+AGG + chr4_3:16404309-16404328 None:intergenic 35.0%
!! ATGCCAAGTTGGTTTAGTTT+AGG - chr4_3:16404408-16404427 Msa0632430:five_prime_UTR 35.0%
! AATAGTTTGTGGGGTGAAGA+AGG + chr4_3:16394541-16394560 None:intergenic 40.0%
AATTCGTTGCACGGTTATAG+GGG + chr4_3:16394652-16394671 None:intergenic 40.0%
ATGAACTTGAAGAAGAACGC+CGG + chr4_3:16394746-16394765 None:intergenic 40.0%
ATCTTCTTCAAGCGAACGAT+CGG - chr4_3:16394764-16394783 Msa0632430:three_prime_UTR 40.0%
GTTAAAGTTGAGCGTGAAGT+AGG - chr4_3:16394786-16394805 Msa0632430:three_prime_UTR 40.0%
AGTACTATCCACAACTTCCT+TGG + chr4_3:16394832-16394851 None:intergenic 40.0%
AAGGTGAAGTGAATTCTTGG+AGG - chr4_3:16395803-16395822 Msa0632430:intron 40.0%
! AATGTCTGCCTTGACCATTT+TGG + chr4_3:16395995-16396014 None:intergenic 40.0%
TATTTCTTCACGGAGAAGCA+TGG + chr4_3:16396299-16396318 None:intergenic 40.0%
TACTGGCAATGTGGTAACTT+TGG + chr4_3:16396596-16396615 None:intergenic 40.0%
TGGAAAGGTCAAAAACAGAG+CGG - chr4_3:16396665-16396684 Msa0632430:intron 40.0%
AAAATTTGTGCTGCATCCTC+AGG + chr4_3:16396706-16396725 None:intergenic 40.0%
! TAGCATACCTTTTCCTGTAC+AGG + chr4_3:16396742-16396761 None:intergenic 40.0%
! TTGTTTTCCCCTTATGTCTG+TGG - chr4_3:16396789-16396808 Msa0632430:intron 40.0%
CATGTTTCCACAGACATAAG+GGG + chr4_3:16396799-16396818 None:intergenic 40.0%
GACATGTTTCCACAGACATA+AGG + chr4_3:16396801-16396820 None:intergenic 40.0%
GTGGAAACATGTCTATATGG+TGG - chr4_3:16396808-16396827 Msa0632430:intron 40.0%
ATAGCTACCGTAAAAGACGA+CGG - chr4_3:16397200-16397219 Msa0632430:intron 40.0%
! TACAGTTCCGTCGTCTTTTA+CGG + chr4_3:16397210-16397229 None:intergenic 40.0%
GCATCAGGTTCAACATCTAT+GGG + chr4_3:16397245-16397264 None:intergenic 40.0%
AGCATCAGGTTCAACATCTA+TGG + chr4_3:16397246-16397265 None:intergenic 40.0%
TCAATGGAGGGATGTAATCA+AGG + chr4_3:16397328-16397347 None:intergenic 40.0%
ATGCTTATTGTTGGTACACG+AGG - chr4_3:16397356-16397375 Msa0632430:intron 40.0%
! CGTTTTCCTATTGCGACAAA+TGG + chr4_3:16397392-16397411 None:intergenic 40.0%
GCTTACAGGTATAGTAATGG+TGG - chr4_3:16397411-16397430 Msa0632430:intron 40.0%
GTTCATGGGAATGTGATGTA+TGG - chr4_3:16397488-16397507 Msa0632430:intron 40.0%
GAGTTGCTAATCTAACACGA+TGG + chr4_3:16398116-16398135 None:intergenic 40.0%
!!! AAGGAGTTTGTTTTGACAGC+TGG - chr4_3:16398147-16398166 Msa0632430:intron 40.0%
!!! AGGAGTTTGTTTTGACAGCT+GGG - chr4_3:16398148-16398167 Msa0632430:intron 40.0%
!! GGTTGGAGTTTTATCCGTTA+GGG - chr4_3:16398169-16398188 Msa0632430:intron 40.0%
!! GTTGGAGTTTTATCCGTTAG+GGG - chr4_3:16398170-16398189 Msa0632430:intron 40.0%
!! TTGGAGTTTTATCCGTTAGG+GGG - chr4_3:16398171-16398190 Msa0632430:intron 40.0%
! ATACATCCAGCAAGGACTTT+TGG + chr4_3:16398201-16398220 None:intergenic 40.0%
CTAGAAGAAGAAACTGCAGT+TGG + chr4_3:16398235-16398254 None:intergenic 40.0%
AAATAAGGGCTTTCTGCCAT+CGG - chr4_3:16398650-16398669 Msa0632430:intron 40.0%
ACCTAGATTACTTACGTCCA+TGG + chr4_3:16399096-16399115 None:intergenic 40.0%
TTTACACGAGACAAAGGATG+TGG + chr4_3:16399279-16399298 None:intergenic 40.0%
!! TGTTGCTTTACACGAGACAA+AGG + chr4_3:16399285-16399304 None:intergenic 40.0%
CGACCAGTCACATATTTAAG+TGG - chr4_3:16399492-16399511 Msa0632430:CDS 40.0%
GAGCCACTTAAATATGTGAC+TGG + chr4_3:16399498-16399517 None:intergenic 40.0%
GGACTCCATATATATGCATG+AGG + chr4_3:16399543-16399562 None:intergenic 40.0%
CTTGTTCCTAAACCAAAAGG+TGG - chr4_3:16399567-16399586 Msa0632430:intron 40.0%
! GGATCAAAGTAACCACCTTT+TGG + chr4_3:16399582-16399601 None:intergenic 40.0%
GATTGACCCAATACAAATCG+AGG + chr4_3:16400001-16400020 None:intergenic 40.0%
ATCATGTTAATCATTCCCCG+TGG - chr4_3:16400018-16400037 Msa0632430:intron 40.0%
CTCTTAAGCATGGAGAAATG+TGG + chr4_3:16400064-16400083 None:intergenic 40.0%
CACATTTCTCCATGCTTAAG+AGG - chr4_3:16400062-16400081 Msa0632430:intron 40.0%
AAGACTGAACCTCTTAAGCA+TGG + chr4_3:16400074-16400093 None:intergenic 40.0%
! CTAAACTAGCTTGTAAGGTG+AGG - chr4_3:16400204-16400223 Msa0632430:CDS 40.0%
ATGAGATTTAACCCACGTCT+AGG - chr4_3:16400272-16400291 Msa0632430:CDS 40.0%
ATAGAATAGGTCACCGCTAT+CGG + chr4_3:16400328-16400347 None:intergenic 40.0%
! AGAATTTGGGTCCCAAGTTT+TGG - chr4_3:16400350-16400369 Msa0632430:intron 40.0%
CCAACACACTTCCAAAACTT+GGG + chr4_3:16400364-16400383 None:intergenic 40.0%
TCCAACACACTTCCAAAACT+TGG + chr4_3:16400365-16400384 None:intergenic 40.0%
!!! AAGTTTTGGAAGTGTGTTGG+AGG - chr4_3:16400364-16400383 Msa0632430:intron 40.0%
! TGTTGGAGGTTTCTTGTTGT+GGG - chr4_3:16400378-16400397 Msa0632430:intron 40.0%
GTTTGTGTCTCAAGGTTTGT+TGG - chr4_3:16400472-16400491 Msa0632430:intron 40.0%
ACAGGCTATTCTGACCTAAT+GGG + chr4_3:16400531-16400550 None:intergenic 40.0%
TACAGGCTATTCTGACCTAA+TGG + chr4_3:16400532-16400551 None:intergenic 40.0%
TGCATATACTTCAGCTTGAG+GGG - chr4_3:16400678-16400697 Msa0632430:intron 40.0%
!! AGCCATTTTACAAGAGACTC+GGG + chr4_3:16400930-16400949 None:intergenic 40.0%
! GTGACAAGCCGATTTACATT+GGG - chr4_3:16400958-16400977 Msa0632430:intron 40.0%
! AAGCCGATTTACATTGGGTT+TGG - chr4_3:16400963-16400982 Msa0632430:intron 40.0%
!! ATTGACTACACTGGTTTGGA+AGG + chr4_3:16401069-16401088 None:intergenic 40.0%
! TGCTATTGACTACACTGGTT+TGG + chr4_3:16401073-16401092 None:intergenic 40.0%
! TAGCATGCTATTGACTACAC+TGG + chr4_3:16401078-16401097 None:intergenic 40.0%
TACTATTGTCTATCCTGTGG+TGG + chr4_3:16401120-16401139 None:intergenic 40.0%
CTCTACTATTGTCTATCCTG+TGG + chr4_3:16401123-16401142 None:intergenic 40.0%
CAGGATAGACAATAGTAGAG+TGG - chr4_3:16401123-16401142 Msa0632430:intron 40.0%
!!! TCATCATGGCTTTTTGGTTG+GGG - chr4_3:16401211-16401230 Msa0632430:intron 40.0%
!! CTCCCTTTTTCCGTCATTTT+TGG - chr4_3:16401298-16401317 Msa0632430:intron 40.0%
AGTGTTGTCAATCCCCAATA+GGG + chr4_3:16401428-16401447 None:intergenic 40.0%
ACACTGTTCCAAACCAATCA+TGG - chr4_3:16401443-16401462 Msa0632430:intron 40.0%
CACTGTTCCAAACCAATCAT+GGG - chr4_3:16401444-16401463 Msa0632430:intron 40.0%
GCAAGTCTGTTAGTTGTTGA+TGG - chr4_3:16401603-16401622 Msa0632430:CDS 40.0%
!! AGTTGTTGATGGGCTATATC+GGG - chr4_3:16401614-16401633 Msa0632430:CDS 40.0%
AGAAAAGTCTCCATGTAGTC+AGG + chr4_3:16401645-16401664 None:intergenic 40.0%
! TTTTGTTGGAGGAGAATGCT+TGG - chr4_3:16401723-16401742 Msa0632430:CDS 40.0%
! GGAGAATGCTTGGATTTTTC+AGG - chr4_3:16401733-16401752 Msa0632430:CDS 40.0%
! GAAGCCTTATCCCATTAAGT+AGG + chr4_3:16401827-16401846 None:intergenic 40.0%
! GTTTTCTTGTCCTAACTCTC+GGG - chr4_3:16401862-16401881 Msa0632430:intron 40.0%
! GGAAGACCGACACTTTTATA+TGG - chr4_3:16401890-16401909 Msa0632430:intron 40.0%
CGCTTATGTTATTCTCGTGT+TGG + chr4_3:16401940-16401959 None:intergenic 40.0%
CGAGAATAACATAAGCGTAG+CGG - chr4_3:16401943-16401962 Msa0632430:intron 40.0%
CGGAAATGACATTGTTGCTA+GGG - chr4_3:16401963-16401982 Msa0632430:intron 40.0%
GGAAATGACATTGTTGCTAG+GGG - chr4_3:16401964-16401983 Msa0632430:intron 40.0%
ATATATAAAGAGAGGGAGGG+GGG + chr4_3:16402371-16402390 None:intergenic 40.0%
!! CAGAGAGGCATCATCAATAA+AGG - chr4_3:16402473-16402492 Msa0632430:intron 40.0%
! GAGGCATCATCAATAAAGGA+TGG - chr4_3:16402477-16402496 Msa0632430:intron 40.0%
GGCATCATCAATAAAGGATG+GGG - chr4_3:16402479-16402498 Msa0632430:intron 40.0%
ATCATCAATAAAGGATGGGG+AGG - chr4_3:16402482-16402501 Msa0632430:intron 40.0%
TGGATAATGTTCCCCATGAT+TGG - chr4_3:16402621-16402640 Msa0632430:intron 40.0%
! TTTTTGTAGGTGCATCATGG+AGG - chr4_3:16402827-16402846 Msa0632430:intron 40.0%
!! TTTGGTGATCAACCCTTTTG+GGG - chr4_3:16402991-16403010 Msa0632430:intron 40.0%
AGAGTACATGATAGAGGAGT+CGG - chr4_3:16403018-16403037 Msa0632430:intron 40.0%
GTGTATCAGCCAAATGAAAC+GGG - chr4_3:16403150-16403169 Msa0632430:intron 40.0%
TCTTTCAGAAGTAGATTCGG+AGG - chr4_3:16403179-16403198 Msa0632430:intron 40.0%
GGCATTAGGCAATAATAGCT+GGG - chr4_3:16403387-16403406 Msa0632430:intron 40.0%
TGGGTAAAACAAGGCTGAAT+AGG - chr4_3:16403509-16403528 Msa0632430:intron 40.0%
!! ACAAAGGCAAACTGCTTTTC+TGG - chr4_3:16403680-16403699 Msa0632430:intron 40.0%
TGCCAAAGCTATGGAAAATG+AGG - chr4_3:16403998-16404017 Msa0632430:intron 40.0%
AGCTATGGAAAATGAGGATG+GGG - chr4_3:16404004-16404023 Msa0632430:intron 40.0%
! TTAGTCTCGGGTTTCTTTTG+AGG + chr4_3:16404065-16404084 None:intergenic 40.0%
GAGAAACAACTAGATGGAGA+TGG + chr4_3:16404095-16404114 None:intergenic 40.0%
TAGAGATTGAAAAACGGTGG+CGG + chr4_3:16404169-16404188 None:intergenic 40.0%
GACAGCTCGGAAATATAGAT+TGG + chr4_3:16404200-16404219 None:intergenic 40.0%
TTTGCAATCACATGACAGCT+CGG + chr4_3:16404213-16404232 None:intergenic 40.0%
! TTTTCACCATGACCTACATG+TGG - chr4_3:16404353-16404372 Msa0632430:intron 40.0%
ATTAGACCACATGTAGGTCA+TGG + chr4_3:16404362-16404381 None:intergenic 40.0%
!! AAACGGATTAGACCACATGT+AGG + chr4_3:16404368-16404387 None:intergenic 40.0%
TGCGACCTAAATTCGTTGCA+CGG + chr4_3:16394661-16394680 None:intergenic 45.0%
CGAATTTAGGTCGCATTCAC+CGG - chr4_3:16394666-16394685 Msa0632430:three_prime_UTR 45.0%
ACTATCCACAACTTCCTTGG+TGG + chr4_3:16394829-16394848 None:intergenic 45.0%
TATCATGTATTGCGGGACTG+AGG - chr4_3:16395468-16395487 Msa0632430:intron 45.0%
CATGTCCACCAAAATGGTCA+AGG - chr4_3:16395984-16396003 Msa0632430:intron 45.0%
! TTTTCGTATGTCTCTGCCTC+TGG + chr4_3:16396339-16396358 None:intergenic 45.0%
TGCTCGGAATGCCTAAATAC+AGG + chr4_3:16396564-16396583 None:intergenic 45.0%
GTATTTAGGCATTCCGAGCA+CGG - chr4_3:16396564-16396583 Msa0632430:intron 45.0%
TATTTAGGCATTCCGAGCAC+GGG - chr4_3:16396565-16396584 Msa0632430:intron 45.0%
GGATACATCTACTGGCAATG+TGG + chr4_3:16396605-16396624 None:intergenic 45.0%
TTGCCAGTAGATGTATCCCA+TGG - chr4_3:16396607-16396626 Msa0632430:intron 45.0%
TCTCCATGGGATACATCTAC+TGG + chr4_3:16396613-16396632 None:intergenic 45.0%
TATGTTTGGATGGAGAGACG+TGG - chr4_3:16396920-16396939 Msa0632430:intron 45.0%
TGGTTGGGAAAATGAGGTGT+GGG - chr4_3:16396940-16396959 Msa0632430:intron 45.0%
GATGTTGAACCTGATGCTCT+TGG - chr4_3:16397248-16397267 Msa0632430:intron 45.0%
GTACAGCCATTTGTCGCAAT+AGG - chr4_3:16397383-16397402 Msa0632430:intron 45.0%
CGCAATAGGAAAACGCTTAC+AGG - chr4_3:16397397-16397416 Msa0632430:intron 45.0%
CAACAACTAGCAGCACATGA+AGG + chr4_3:16397468-16397487 None:intergenic 45.0%
! CTTCATGTGCTGCTAGTTGT+TGG - chr4_3:16397466-16397485 Msa0632430:intron 45.0%
!! TGCTGCTAGTTGTTGGTTCA+TGG - chr4_3:16397473-16397492 Msa0632430:intron 45.0%
!! GCTGCTAGTTGTTGGTTCAT+GGG - chr4_3:16397474-16397493 Msa0632430:intron 45.0%
CCTGCGCGTAAATGTGAATA+AGG + chr4_3:16398086-16398105 None:intergenic 45.0%
CCTTATTCACATTTACGCGC+AGG - chr4_3:16398083-16398102 Msa0632430:intron 45.0%
CACATTTACGCGCAGGATTA+TGG - chr4_3:16398090-16398109 Msa0632430:intron 45.0%
!!! GTTTGTTTTGACAGCTGGGT+TGG - chr4_3:16398152-16398171 Msa0632430:intron 45.0%
!! GGGTTGGAGTTTTATCCGTT+AGG - chr4_3:16398168-16398187 Msa0632430:intron 45.0%
CGTAGTACATACATCCAGCA+AGG + chr4_3:16398209-16398228 None:intergenic 45.0%
CATATTACGGAGTTGTAGGG+AGG + chr4_3:16398554-16398573 None:intergenic 45.0%
AATAAGGGCTTTCTGCCATC+GGG - chr4_3:16398651-16398670 Msa0632430:intron 45.0%
CTCTGAACAGGTATCTCAGA+GGG + chr4_3:16398678-16398697 None:intergenic 45.0%
TCTCTGAACAGGTATCTCAG+AGG + chr4_3:16398679-16398698 None:intergenic 45.0%
TATACCATATGCTGGGGGAT+TGG + chr4_3:16398796-16398815 None:intergenic 45.0%
GCCATGGACGTAAGTAATCT+AGG - chr4_3:16399092-16399111 Msa0632430:intron 45.0%
TCTCGTGTAAAGCAACAAGC+TGG - chr4_3:16399288-16399307 Msa0632430:intron 45.0%
!! GTCGACTCGTTAATTTGGCT+TGG - chr4_3:16399423-16399442 Msa0632430:CDS 45.0%
TCCCCGTGGCATATAAAGAT+TGG - chr4_3:16400032-16400051 Msa0632430:intron 45.0%
GCCAATCTTTATATGCCACG+GGG + chr4_3:16400036-16400055 None:intergenic 45.0%
CGCCAATCTTTATATGCCAC+GGG + chr4_3:16400037-16400056 None:intergenic 45.0%
GCGCCAATCTTTATATGCCA+CGG + chr4_3:16400038-16400057 None:intergenic 45.0%
AGGTTCAGTCTTGAGTGTGA+GGG - chr4_3:16400082-16400101 Msa0632430:intron 45.0%
AGATGTCAAGTCCTAGACGT+GGG + chr4_3:16400286-16400305 None:intergenic 45.0%
CATCTGAAGAGTGACTCTAG+TGG - chr4_3:16400301-16400320 Msa0632430:CDS 45.0%
TAGAATAGGTCACCGCTATC+GGG + chr4_3:16400327-16400346 None:intergenic 45.0%
!!! CCCAAGTTTTGGAAGTGTGT+TGG - chr4_3:16400361-16400380 Msa0632430:intron 45.0%
GTGTTGGAGGTTTCTTGTTG+TGG - chr4_3:16400377-16400396 Msa0632430:intron 45.0%
AGCCCATTAGTTCATTAGCC+AGG - chr4_3:16400505-16400524 Msa0632430:intron 45.0%
GGCCTGGCTAATGAACTAAT+GGG + chr4_3:16400510-16400529 None:intergenic 45.0%
! CATTTTACAAGAGACTCGGG+AGG + chr4_3:16400927-16400946 None:intergenic 45.0%
CTCCCGAGTCTCTTGTAAAA+TGG - chr4_3:16400925-16400944 Msa0632430:intron 45.0%
! GGTGACAAGCCGATTTACAT+TGG - chr4_3:16400957-16400976 Msa0632430:intron 45.0%
! TTACATTGGGTTTGGTAGCC+TGG - chr4_3:16400971-16400990 Msa0632430:intron 45.0%
! TAGCGGGCACAACTTAGAAT+GGG - chr4_3:16401153-16401172 Msa0632430:intron 45.0%
! AAAACGCTGTAGTGGGAACT+GGG + chr4_3:16401386-16401405 None:intergenic 45.0%
! TTCCCACTACAGCGTTTTCA+GGG - chr4_3:16401388-16401407 Msa0632430:intron 45.0%
ACAGTTGCTACAACCCCTAT+TGG - chr4_3:16401411-16401430 Msa0632430:intron 45.0%
CAGTTGCTACAACCCCTATT+GGG - chr4_3:16401412-16401431 Msa0632430:intron 45.0%
AGTTGCTACAACCCCTATTG+GGG - chr4_3:16401413-16401432 Msa0632430:intron 45.0%
GTGTTGTCAATCCCCAATAG+GGG + chr4_3:16401427-16401446 None:intergenic 45.0%
CAGTGTTGTCAATCCCCAAT+AGG + chr4_3:16401429-16401448 None:intergenic 45.0%
! CAATCTGCCCATGATTGGTT+TGG + chr4_3:16401454-16401473 None:intergenic 45.0%
TGAAGCAATCTGCCCATGAT+TGG + chr4_3:16401459-16401478 None:intergenic 45.0%
CAGATTGCTTCACCCAAAGT+TGG - chr4_3:16401467-16401486 Msa0632430:intron 45.0%
TGCTTGGCTCCCTACTTAAT+GGG - chr4_3:16401814-16401833 Msa0632430:intron 45.0%
GCTCCCTACTTAATGGGATA+AGG - chr4_3:16401820-16401839 Msa0632430:intron 45.0%
GCGGAAATGACATTGTTGCT+AGG - chr4_3:16401962-16401981 Msa0632430:intron 45.0%
AAGGCTTATCCCACTAAGTG+GGG + chr4_3:16402231-16402250 None:intergenic 45.0%
CAAGGCTTATCCCACTAAGT+GGG + chr4_3:16402232-16402251 None:intergenic 45.0%
GGATCTTGAACAGGCTGTAA+CGG + chr4_3:16402407-16402426 None:intergenic 45.0%
!! TGTAGAAGCACTGGAAACCA+CGG - chr4_3:16402448-16402467 Msa0632430:intron 45.0%
AATAAAGGATGGGGAGGTCT+TGG - chr4_3:16402488-16402507 Msa0632430:intron 45.0%
ATAAAGGATGGGGAGGTCTT+GGG - chr4_3:16402489-16402508 Msa0632430:intron 45.0%
TTTCCCAGTGACAGAACCAA+AGG - chr4_3:16402583-16402602 Msa0632430:intron 45.0%
!! AGTCCTTTGGTTCTGTCACT+GGG + chr4_3:16402589-16402608 None:intergenic 45.0%
TGTACTCTCTCACCCCAAAA+GGG + chr4_3:16403006-16403025 None:intergenic 45.0%
ATGTACTCTCTCACCCCAAA+AGG + chr4_3:16403007-16403026 None:intergenic 45.0%
! GGTGAGAGAGTACATGATAG+AGG - chr4_3:16403012-16403031 Msa0632430:intron 45.0%
GAAAACTCGTCAACTGGGAT+AGG + chr4_3:16403051-16403070 None:intergenic 45.0%
GAAGCGAAAACTCGTCAACT+GGG + chr4_3:16403056-16403075 None:intergenic 45.0%
AGAAGCAAGCCCGTTTCATT+TGG + chr4_3:16403162-16403181 None:intergenic 45.0%
GGGCATTAGGCAATAATAGC+TGG - chr4_3:16403386-16403405 Msa0632430:intron 45.0%
! GGCAATAATAGCTGGGTTAG+AGG - chr4_3:16403394-16403413 Msa0632430:intron 45.0%
! ATAATAGCTGGGTTAGAGGC+TGG - chr4_3:16403398-16403417 Msa0632430:intron 45.0%
CCAACGAGAAAGACTACATC+GGG + chr4_3:16403448-16403467 None:intergenic 45.0%
GCCAACGAGAAAGACTACAT+CGG + chr4_3:16403449-16403468 None:intergenic 45.0%
! GGATTAGGTGTTTTCCTCCA+TGG + chr4_3:16403471-16403490 None:intergenic 45.0%
TCTGTCTGTCCACTCTCAAT+TGG + chr4_3:16403558-16403577 None:intergenic 45.0%
TTGCGTGGCCTCAAAATTTG+AGG - chr4_3:16403852-16403871 Msa0632430:intron 45.0%
GAAAATGAGGATGGGGTAAC+TGG - chr4_3:16404011-16404030 Msa0632430:intron 45.0%
! AGATGGCTCTGTGTTAGTCT+CGG + chr4_3:16404078-16404097 None:intergenic 45.0%
!!! ATATTTTACATAATTAATTT+TGG - chr4_3:16395494-16395513 Msa0632430:intron 5.0%
!! AAAATAAATAAATTATGATA+TGG + chr4_3:16397033-16397052 None:intergenic 5.0%
GTTGAGCGTGAAGTAGGTAC+CGG - chr4_3:16394792-16394811 Msa0632430:three_prime_UTR 50.0%
!! CGTGAAGTAGGTACCGGAAA+CGG - chr4_3:16394798-16394817 Msa0632430:exon 50.0%
AAGCACCACCAAGGAAGTTG+TGG - chr4_3:16394821-16394840 Msa0632430:CDS 50.0%
TTTGGAAGAATGACGGCGCT+AGG - chr4_3:16395512-16395531 Msa0632430:intron 50.0%
! GTCTGCCTTGACCATTTTGG+TGG + chr4_3:16395992-16396011 None:intergenic 50.0%
ATTTAGGCATTCCGAGCACG+GGG - chr4_3:16396566-16396585 Msa0632430:intron 50.0%
TTTGGATGGAGAGACGTGGT+TGG - chr4_3:16396924-16396943 Msa0632430:intron 50.0%
TTGGATGGAGAGACGTGGTT+GGG - chr4_3:16396925-16396944 Msa0632430:intron 50.0%
GAGACGTGGTTGGGAAAATG+AGG - chr4_3:16396934-16396953 Msa0632430:intron 50.0%
GTGGTTGGGAAAATGAGGTG+TGG - chr4_3:16396939-16396958 Msa0632430:intron 50.0%
! ACTTTTGGATCGCCCCCTAA+CGG + chr4_3:16398186-16398205 None:intergenic 50.0%
GGGACACCCGAATCAATATC+AGG + chr4_3:16398750-16398769 None:intergenic 50.0%
TTGTAAGGCCTCTGCGACAT+GGG + chr4_3:16399046-16399065 None:intergenic 50.0%
TTTGTAAGGCCTCTGCGACA+TGG + chr4_3:16399047-16399066 None:intergenic 50.0%
GGATGTGGAAAGTCAGCTGT+TGG + chr4_3:16399264-16399283 None:intergenic 50.0%
GAGGTTCAGTCTTGAGTGTG+AGG - chr4_3:16400081-16400100 Msa0632430:intron 50.0%
CAGATGTCAAGTCCTAGACG+TGG + chr4_3:16400287-16400306 None:intergenic 50.0%
GGGCCTGGCTAATGAACTAA+TGG + chr4_3:16400511-16400530 None:intergenic 50.0%
GTTCATTAGCCAGGCCCATT+AGG - chr4_3:16400514-16400533 Msa0632430:intron 50.0%
! CTATTCTGACCTAATGGGCC+TGG + chr4_3:16400526-16400545 None:intergenic 50.0%
! AGTAGAGTGGTTTGGCGTAG+CGG - chr4_3:16401136-16401155 Msa0632430:intron 50.0%
!! GTAGCGGGCACAACTTAGAA+TGG - chr4_3:16401152-16401171 Msa0632430:intron 50.0%
AGCGGGCACAACTTAGAATG+GGG - chr4_3:16401154-16401173 Msa0632430:intron 50.0%
GAGTAGCCCTAGAACTGCTT+TGG + chr4_3:16401266-16401285 None:intergenic 50.0%
! GAAAACGCTGTAGTGGGAAC+TGG + chr4_3:16401387-16401406 None:intergenic 50.0%
! GTTCCCACTACAGCGTTTTC+AGG - chr4_3:16401387-16401406 Msa0632430:intron 50.0%
GTCCCTGAAAACGCTGTAGT+GGG + chr4_3:16401393-16401412 None:intergenic 50.0%
TGTCCCTGAAAACGCTGTAG+TGG + chr4_3:16401394-16401413 None:intergenic 50.0%
TCGGGTTTGTCCTGACTACA+TGG - chr4_3:16401632-16401651 Msa0632430:CDS 50.0%
CCAAGCACCAAAGAGATGTG+AGG + chr4_3:16401801-16401820 None:intergenic 50.0%
!! CCTCACATCTCTTTGGTGCT+TGG - chr4_3:16401798-16401817 Msa0632430:intron 50.0%
GTGCTTGGCTCCCTACTTAA+TGG - chr4_3:16401813-16401832 Msa0632430:intron 50.0%
!! ATATGGTACGGAGTGTTGGG+CGG - chr4_3:16401907-16401926 Msa0632430:intron 50.0%
! ATTGTTGCTAGGGGTGTGCA+TGG - chr4_3:16401973-16401992 Msa0632430:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr4_3:16402227-16402246 None:intergenic 50.0%
CCAAGGCTTATCCCACTAAG+TGG + chr4_3:16402233-16402252 None:intergenic 50.0%
CCACTTAGTGGGATAAGCCT+TGG - chr4_3:16402230-16402249 Msa0632430:CDS 50.0%
!! GTAGAAGCACTGGAAACCAC+GGG - chr4_3:16402449-16402468 Msa0632430:intron 50.0%
TAAAGGATGGGGAGGTCTTG+GGG - chr4_3:16402490-16402509 Msa0632430:intron 50.0%
!! GAGTCCTTTGGTTCTGTCAC+TGG + chr4_3:16402590-16402609 None:intergenic 50.0%
AACTCGTCAACTGGGATAGG+TGG + chr4_3:16403048-16403067 None:intergenic 50.0%
GGAAGCGAAAACTCGTCAAC+TGG + chr4_3:16403057-16403076 None:intergenic 50.0%
!! CTGGTTGGGCAGCTTTAAGT+TGG - chr4_3:16403417-16403436 Msa0632430:intron 50.0%
CCCGATGTAGTCTTTCTCGT+TGG - chr4_3:16403445-16403464 Msa0632430:intron 50.0%
GTAGTCTTTCTCGTTGGCCA+TGG - chr4_3:16403451-16403470 Msa0632430:intron 50.0%
GGTAAAGTGACAACAGGGAG+TGG + chr4_3:16403636-16403655 None:intergenic 50.0%
! GATGGCTCTGTGTTAGTCTC+GGG + chr4_3:16404077-16404096 None:intergenic 50.0%
ATTCCTGATCCAGTGCAAGC+TGG - chr4_3:16404138-16404157 Msa0632430:CDS 50.0%
!! CTTGGTGGTGCTTCCGTTTC+CGG + chr4_3:16394814-16394833 None:intergenic 55.0%
ACTTTGGACAACCCCGTGCT+CGG + chr4_3:16396580-16396599 None:intergenic 55.0%
CAGAGCGGCAGAGACATCTA+AGG - chr4_3:16396680-16396699 Msa0632430:intron 55.0%
! GCAGAGACATCTAAGGCCTG+AGG - chr4_3:16396687-16396706 Msa0632430:intron 55.0%
! GAACCTGATGCTCTTGGTGC+TGG - chr4_3:16397254-16397273 Msa0632430:intron 55.0%
!! GATCCAGCACCAAGAGCATC+AGG + chr4_3:16397260-16397279 None:intergenic 55.0%
GGCGATCCAAAAGTCCTTGC+TGG - chr4_3:16398192-16398211 Msa0632430:intron 55.0%
ATGGCCAATCCCCCAGCATA+TGG - chr4_3:16398789-16398808 Msa0632430:intron 55.0%
! GGAAAGTCAGCTGTTGGCCT+GGG + chr4_3:16399258-16399277 None:intergenic 55.0%
TGGAAAGTCAGCTGTTGGCC+TGG + chr4_3:16399259-16399278 None:intergenic 55.0%
TGACTCTAGTGGCCCGATAG+CGG - chr4_3:16400312-16400331 Msa0632430:intron 55.0%
! GCTATAGGCTTTATCGGCCC+TGG - chr4_3:16401094-16401113 Msa0632430:intron 55.0%
TGTCTATCCTGTGGTGGCCA+GGG + chr4_3:16401114-16401133 None:intergenic 55.0%
TTGTCTATCCTGTGGTGGCC+AGG + chr4_3:16401115-16401134 None:intergenic 55.0%
! GTAGAGTGGTTTGGCGTAGC+GGG - chr4_3:16401137-16401156 Msa0632430:intron 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr4_3:16402219-16402238 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr4_3:16402218-16402237 Msa0632430:CDS 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr4_3:16402219-16402238 Msa0632430:CDS 55.0%
TAGGTGCATCATGGAGGAGC+AGG - chr4_3:16402833-16402852 Msa0632430:intron 55.0%
GAGCAGGAACAACAGCTGCA+GGG - chr4_3:16402849-16402868 Msa0632430:intron 55.0%
CGTCAACTGGGATAGGTGGA+GGG + chr4_3:16403044-16403063 None:intergenic 55.0%
TCGTCAACTGGGATAGGTGG+AGG + chr4_3:16403045-16403064 None:intergenic 55.0%
! TAGCTGGGTTAGAGGCTGGT+TGG - chr4_3:16403402-16403421 Msa0632430:intron 55.0%
! AGCTGGGTTAGAGGCTGGTT+GGG - chr4_3:16403403-16403422 Msa0632430:intron 55.0%
GTCTTTCTCGTTGGCCATGG+AGG - chr4_3:16403454-16403473 Msa0632430:intron 55.0%
TGACCAGCTTGCACTGGATC+AGG + chr4_3:16404144-16404163 None:intergenic 55.0%
GTCGTACACGACGGCGGAAA+TGG - chr4_3:16394701-16394720 Msa0632430:three_prime_UTR 60.0%
GTACACGACGGCGGAAATGG+CGG - chr4_3:16394704-16394723 Msa0632430:three_prime_UTR 60.0%
CGGAATTGCCGCAGAATCGC+CGG - chr4_3:16394724-16394743 Msa0632430:intron 60.0%
GAAGAACGCCGGCGATTCTG+CGG + chr4_3:16394735-16394754 None:intergenic 60.0%
!! CGGAAACGGAAGCACCACCA+AGG - chr4_3:16394812-16394831 Msa0632430:exon 60.0%
GGAAGAATGACGGCGCTAGG+CGG - chr4_3:16395515-16395534 Msa0632430:intron 60.0%
GAAGAATGACGGCGCTAGGC+GGG - chr4_3:16395516-16395535 Msa0632430:intron 60.0%
! CGGAGAAGCATGGAGAGAGC+AGG + chr4_3:16396289-16396308 None:intergenic 60.0%
GGTATCTCAGAGGGTCCCGA+TGG + chr4_3:16398669-16398688 None:intergenic 60.0%
AGGGCATACCCATGTCGCAG+AGG - chr4_3:16399035-16399054 Msa0632430:intron 60.0%
TGTCCTAACTCTCGGGCAGC+TGG - chr4_3:16401869-16401888 Msa0632430:intron 60.0%
CTTCCAGCTGCCCGAGAGTT+AGG + chr4_3:16401875-16401894 None:intergenic 60.0%
! AAAGAGAGGGAGGGGGGCAT+GGG + chr4_3:16402365-16402384 None:intergenic 60.0%
TAAAGAGAGGGAGGGGGGCA+TGG + chr4_3:16402366-16402385 None:intergenic 60.0%
CTGGAAACCACGGGACAGAG+AGG - chr4_3:16402458-16402477 Msa0632430:intron 60.0%
GATGATGCCTCTCTGTCCCG+TGG + chr4_3:16402468-16402487 None:intergenic 60.0%
GGGAGGTCTTGGGGACTGTA+AGG - chr4_3:16402499-16402518 Msa0632430:intron 60.0%
GGAGCAGGAACAACAGCTGC+AGG - chr4_3:16402848-16402867 Msa0632430:intron 60.0%
GTACGACGCGCGCGAGATTC+CGG + chr4_3:16394688-16394707 None:intergenic 65.0%
TTATCGGCCCTGGCCACCAC+AGG - chr4_3:16401104-16401123 Msa0632430:intron 65.0%
GCGGTCTGACCAGCTTGCAC+TGG + chr4_3:16404150-16404169 None:intergenic 65.0%
CTCGCGCGCGTCGTACACGA+CGG - chr4_3:16394692-16394711 Msa0632430:three_prime_UTR 70.0%
GCGCGCGTCGTACACGACGG+CGG - chr4_3:16394695-16394714 Msa0632430:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 16394475 16404485 16394475 ID=Msa0632430;Name=Msa0632430
chr4_3 mRNA 16394475 16404485 16394475 ID=Msa0632430-mRNA-1;Parent=Msa0632430;Name=Msa0632430-mRNA-1;_AED=0.14;_eAED=0.14;_QI=199|0.81|0.88|0.94|0.87|0.76|17|316|665
chr4_3 exon 16394475 16394728 16394475 ID=Msa0632430-mRNA-1:exon:4678;Parent=Msa0632430-mRNA-1
chr4_3 exon 16394753 16394985 16394753 ID=Msa0632430-mRNA-1:exon:4677;Parent=Msa0632430-mRNA-1
chr4_3 exon 16395844 16395993 16395844 ID=Msa0632430-mRNA-1:exon:4676;Parent=Msa0632430-mRNA-1
chr4_3 exon 16396077 16396124 16396077 ID=Msa0632430-mRNA-1:exon:4675;Parent=Msa0632430-mRNA-1
chr4_3 exon 16396293 16396369 16396293 ID=Msa0632430-mRNA-1:exon:4674;Parent=Msa0632430-mRNA-1
chr4_3 exon 16396445 16396547 16396445 ID=Msa0632430-mRNA-1:exon:4673;Parent=Msa0632430-mRNA-1
chr4_3 exon 16396975 16397097 16396975 ID=Msa0632430-mRNA-1:exon:4672;Parent=Msa0632430-mRNA-1
chr4_3 exon 16397968 16398098 16397968 ID=Msa0632430-mRNA-1:exon:4671;Parent=Msa0632430-mRNA-1
chr4_3 exon 16399372 16399552 16399372 ID=Msa0632430-mRNA-1:exon:4670;Parent=Msa0632430-mRNA-1
chr4_3 exon 16399643 16399700 16399643 ID=Msa0632430-mRNA-1:exon:4669;Parent=Msa0632430-mRNA-1
chr4_3 exon 16399860 16399923 16399860 ID=Msa0632430-mRNA-1:exon:4668;Parent=Msa0632430-mRNA-1
chr4_3 exon 16400150 16400320 16400150 ID=Msa0632430-mRNA-1:exon:4667;Parent=Msa0632430-mRNA-1
chr4_3 exon 16400744 16400855 16400744 ID=Msa0632430-mRNA-1:exon:4666;Parent=Msa0632430-mRNA-1
chr4_3 exon 16401542 16401778 16401542 ID=Msa0632430-mRNA-1:exon:4665;Parent=Msa0632430-mRNA-1
chr4_3 exon 16402207 16402388 16402207 ID=Msa0632430-mRNA-1:exon:4664;Parent=Msa0632430-mRNA-1
chr4_3 exon 16404051 16404323 16404051 ID=Msa0632430-mRNA-1:exon:4663;Parent=Msa0632430-mRNA-1
chr4_3 exon 16404370 16404485 16404370 ID=Msa0632430-mRNA-1:exon:4662;Parent=Msa0632430-mRNA-1
chr4_3 five_prime_UTR 16404370 16404485 16404370 ID=Msa0632430-mRNA-1:five_prime_utr;Parent=Msa0632430-mRNA-1
chr4_3 five_prime_UTR 16404241 16404323 16404241 ID=Msa0632430-mRNA-1:five_prime_utr;Parent=Msa0632430-mRNA-1
chr4_3 CDS 16404051 16404240 16404051 ID=Msa0632430-mRNA-1:cds;Parent=Msa0632430-mRNA-1
chr4_3 CDS 16402207 16402388 16402207 ID=Msa0632430-mRNA-1:cds;Parent=Msa0632430-mRNA-1
chr4_3 CDS 16401542 16401778 16401542 ID=Msa0632430-mRNA-1:cds;Parent=Msa0632430-mRNA-1
chr4_3 CDS 16400744 16400855 16400744 ID=Msa0632430-mRNA-1:cds;Parent=Msa0632430-mRNA-1
chr4_3 CDS 16400150 16400320 16400150 ID=Msa0632430-mRNA-1:cds;Parent=Msa0632430-mRNA-1
chr4_3 CDS 16399860 16399923 16399860 ID=Msa0632430-mRNA-1:cds;Parent=Msa0632430-mRNA-1
chr4_3 CDS 16399643 16399700 16399643 ID=Msa0632430-mRNA-1:cds;Parent=Msa0632430-mRNA-1
chr4_3 CDS 16399372 16399552 16399372 ID=Msa0632430-mRNA-1:cds;Parent=Msa0632430-mRNA-1
chr4_3 CDS 16397968 16398098 16397968 ID=Msa0632430-mRNA-1:cds;Parent=Msa0632430-mRNA-1
chr4_3 CDS 16396975 16397097 16396975 ID=Msa0632430-mRNA-1:cds;Parent=Msa0632430-mRNA-1
chr4_3 CDS 16396445 16396547 16396445 ID=Msa0632430-mRNA-1:cds;Parent=Msa0632430-mRNA-1
chr4_3 CDS 16396293 16396369 16396293 ID=Msa0632430-mRNA-1:cds;Parent=Msa0632430-mRNA-1
chr4_3 CDS 16396077 16396124 16396077 ID=Msa0632430-mRNA-1:cds;Parent=Msa0632430-mRNA-1
chr4_3 CDS 16395844 16395993 16395844 ID=Msa0632430-mRNA-1:cds;Parent=Msa0632430-mRNA-1
chr4_3 CDS 16394815 16394985 16394815 ID=Msa0632430-mRNA-1:cds;Parent=Msa0632430-mRNA-1
chr4_3 three_prime_UTR 16394753 16394814 16394753 ID=Msa0632430-mRNA-1:three_prime_utr;Parent=Msa0632430-mRNA-1
chr4_3 three_prime_UTR 16394475 16394728 16394475 ID=Msa0632430-mRNA-1:three_prime_utr;Parent=Msa0632430-mRNA-1
Gene Sequence

>Msa0632430

ATGGCGGAATTGCCGCAGAATCGCCGGCGTTCTTCTTCAAGTTCATCTTCTTCAAGCGAACGATCGGTTAAAGTTGAGCGTGAAGTAGGTACCGGAAACGGAAGCACCACCAAGGAAGTTGTGGATAGTACTGATTCTGTTTCCAATGGAGTTTCTGCTATTAACGGTGAAAGTAGTTCTTCAAAATCAGGCATTCCGAGCACGGGGTTGTCCAAAGTTACCACATTGCCAGTAGATGTATCCCATGGAGATAAAATAGAGTCAAGTCCAAGTAAGTTTAAGTTGGAAAGGTCAAAAACAGAGCGGCAGAGACATCTAAGGCCTGAGGATGCAGCACAAATTTTTAATAACAAAATTCCTGTACAGGAAAAGCTTAGATTGTTGAACAGAATAGCTACCGTAAAAGACGACGGAACTGTAGAATTTGACGTTCCCATAGATGTTGAACCTGATGCTCTTGGTGCTGGATCCAAACATGTAAATAATGTTATTGATGATTCACATGGTGCAACAGACCTTGATTACATCCCTCCATTGAATATAGTGATGCTTATTGTTGGTACACGAGGAGATGTACAGCCATTTGTCGCAATAGGAAAACGCTTACAGGATTATGGCCATCGTGTTAGATTAGCAACTCATTCAAATTTTAAGGAGTTTGTTTTGACAGCTGGGTTGGAGTTTTATCCGTTAGGGGGCGATCCAAAAGTCCTTGCTGGATATATGGTTAAAAATAAGGGCTTTCTGCCATCGGGACCCTCTGAGATACCTGTTCAGAGAAATCAAATGAAAGAAATTATTAACTCTCTGCTTCCTGCATGTAAAGAACCTGATATTGATTCGGGTGTCCCCTTTAAAGCAGATGCAATCATGGCCAATCCCCCAGCATATGGGCATACCCATGTCGCAGAGGCCTTACAAATTCCAATTCATATTTTTTTCACAATGCCATGGACGCCAACAGCTGACTTTCCACATCCTTTGTCTCGTGTAAAGCAACAAGCTGGTTATAGGCTTTCATATCAAATAGTCGACTCGTTAATTTGGCTTGGAATACGAGACATGATTAATGATCTTCGGAAGAAAAAGTTGAAGCTACGACCAGTCACATATTTAAGTGGCTCACAAGGTTTTGAAAATGACATTCCTCATGCATATATATGGAGTCCTCATCTTGTTCCTAAACCAAAAGGTGATTGGGGACCAAAAATTGATGTAGTAGGGTTTTGCTTTCTTGATCTAGCATCAAATTATGAACCTCCCGAGTCTCTTGTAAAATGGCTTGAAGATGGTGACAAGCCGATTTACATTGGGTTTGGTAGCCTGTTTTCTTGTCCTAACTCTCGGGCAGCTGGAAGACCGACACTTTTATATGGTACGGAGTGTTGGGCGGTGAAGAACCAACACGAGAATAACATAAGCGTAGCGGAAATGACATTGTTGCTAGGGCCTGTTCAAGATCCAAAAAAGATGACACAAATAATTGTAGAAGCACTGGAAACCACGGGACAGAGAGGCATCATCAATAAAGGATGGGGAGGTCTTGGGGACTTGACAGAACCAAAGGACTCTATATACTTGTTGGATAATGTTCCCCATGATTGGCTATTTTTACAATGTAAAGCAGTGGTGCATCATGGAGGAGCAGGAACAACAGCTGCAGGGCTGAAAGCTGCTTGCCCAACGACCATAGTTCCTTTTTTTGGTGATCAACCCTTTTGGGGTGAGAGAGTACATGATAGAGGAGTCGGCCCTCCACCTATCCCAGTTGACGAGTTTTCGCTTCCTAAGTTGATTGATGCCATAAATTTTATGCTAGATCCCAAGGTAAAGGAGCATGCAATTGAACTTGCCAAAGCTATGGAAAATGAGGATGGGGTAACTGGAGCTGTGAAAGCATTTTTTAAGCAGCTTCCTCAAAAGAAACCCGAGACTAACACAGAGCCATCTCCATCTAGTTGTTTCTCAAATATAGCTAGATGTTTTGGTCATTCCTGA
Protein sequence

>Msa0632430

MAELPQNRRRSSSSSSSSSERSVKVEREVGTGNGSTTKEVVDSTDSVSNGVSAINGESSSSKSGIPSTGLSKVTTLPVDVSHGDKIESSPSKFKLERSKTERQRHLRPEDAAQIFNNKIPVQEKLRLLNRIATVKDDGTVEFDVPIDVEPDALGAGSKHVNNVIDDSHGATDLDYIPPLNIVMLIVGTRGDVQPFVAIGKRLQDYGHRVRLATHSNFKEFVLTAGLEFYPLGGDPKVLAGYMVKNKGFLPSGPSEIPVQRNQMKEIINSLLPACKEPDIDSGVPFKADAIMANPPAYGHTHVAEALQIPIHIFFTMPWTPTADFPHPLSRVKQQAGYRLSYQIVDSLIWLGIRDMINDLRKKKLKLRPVTYLSGSQGFENDIPHAYIWSPHLVPKPKGDWGPKIDVVGFCFLDLASNYEPPESLVKWLEDGDKPIYIGFGSLFSCPNSRAAGRPTLLYGTECWAVKNQHENNISVAEMTLLLGPVQDPKKMTQIIVEALETTGQRGIINKGWGGLGDLTEPKDSIYLLDNVPHDWLFLQCKAVVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGERVHDRGVGPPPIPVDEFSLPKLIDAINFMLDPKVKEHAIELAKAMENEDGVTGAVKAFFKQLPQKKPETNTEPSPSSCFSNIARCFGHS*