Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0671200 | XP_039689637.1 | 98.234 | 623 | 8 | 1 | 1 | 620 | 1 | 623 | 0.0 | 1255 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0671200 | sp|Q9M8Z7|U80A2_ARATH | 72.850 | 593 | 152 | 5 | 36 | 620 | 46 | 637 | 0.0 | 870 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0671200 | G7JVN6 | 98.234 | 623 | 8 | 1 | 1 | 620 | 1 | 623 | 0.0 | 1255 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0632430 | Msa0671200 | 0.808585 | 2.880896e-50 | -8.615850e-47 |
Msa0671160 | Msa0671200 | 0.995140 | 2.181269e-213 | -8.615850e-47 |
Msa0671200 | Msa0686950 | 0.827233 | 1.752085e-54 | -8.615850e-47 |
Msa0671200 | Msa0827520 | 0.828758 | 7.524154e-55 | -8.615850e-47 |
Msa0671200 | Msa1342960 | 0.821977 | 3.030168e-53 | -8.615850e-47 |
Msa0671200 | Msa1383620 | 0.992152 | 1.319419e-191 | -8.615850e-47 |
Msa0536360 | Msa0671200 | 0.969564 | 2.619486e-130 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0671200 | MtrunA17_Chr4g0010281 | 98.234 | 623 | 8 | 1 | 1 | 620 | 1 | 623 | 0.0 | 1255 |
Msa0671200 | MtrunA17_Chr4g0010291 | 88.406 | 621 | 71 | 1 | 1 | 620 | 1 | 621 | 0.0 | 1114 |
Msa0671200 | MtrunA17_Chr7g0248971 | 69.884 | 518 | 147 | 4 | 109 | 618 | 81 | 597 | 0.0 | 751 |
Msa0671200 | MtrunA17_Chr1g0201761 | 53.093 | 582 | 249 | 7 | 35 | 607 | 30 | 596 | 0.0 | 631 |
Msa0671200 | MtrunA17_Chr0c19g0493781 | 70.382 | 314 | 81 | 2 | 317 | 618 | 3 | 316 | 3.96e-164 | 471 |
Msa0671200 | MtrunA17_Chr7g0224211 | 80.928 | 194 | 36 | 1 | 428 | 620 | 32 | 225 | 4.55e-108 | 324 |
Msa0671200 | MtrunA17_Chr0c19g0493791 | 65.877 | 211 | 68 | 2 | 109 | 316 | 81 | 290 | 4.72e-88 | 275 |
Msa0671200 | MtrunA17_Chr7g0224201 | 97.727 | 44 | 1 | 0 | 395 | 438 | 28 | 71 | 1.49e-26 | 104 |
Msa0671200 | MtrunA17_Chr2g0301441 | 24.286 | 490 | 292 | 14 | 179 | 593 | 9 | 494 | 5.62e-24 | 105 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0671200 | AT3G07020.1 | 72.850 | 593 | 152 | 5 | 36 | 620 | 46 | 637 | 0.0 | 870 |
Msa0671200 | AT3G07020.2 | 72.850 | 593 | 152 | 5 | 36 | 620 | 46 | 637 | 0.0 | 870 |
Msa0671200 | AT3G07020.3 | 77.985 | 536 | 111 | 4 | 91 | 620 | 21 | 555 | 0.0 | 857 |
Msa0671200 | AT1G43620.7 | 52.398 | 563 | 240 | 8 | 54 | 603 | 39 | 586 | 0.0 | 608 |
Msa0671200 | AT1G43620.1 | 52.398 | 563 | 240 | 8 | 54 | 603 | 39 | 586 | 0.0 | 608 |
Msa0671200 | AT1G43620.3 | 52.398 | 563 | 240 | 8 | 54 | 603 | 39 | 586 | 0.0 | 608 |
Msa0671200 | AT1G43620.5 | 52.398 | 563 | 240 | 8 | 54 | 603 | 39 | 586 | 0.0 | 608 |
Msa0671200 | AT1G43620.2 | 52.398 | 563 | 240 | 8 | 54 | 603 | 39 | 586 | 0.0 | 608 |
Msa0671200 | AT1G43620.6 | 52.398 | 563 | 240 | 8 | 54 | 603 | 39 | 586 | 0.0 | 608 |
Msa0671200 | AT1G43620.4 | 52.398 | 563 | 240 | 8 | 54 | 603 | 39 | 586 | 0.0 | 608 |
Msa0671200 | AT1G43620.8 | 61.029 | 408 | 156 | 2 | 199 | 603 | 7 | 414 | 0.0 | 551 |
Msa0671200 | AT5G24750.1 | 22.901 | 524 | 269 | 20 | 179 | 593 | 13 | 510 | 1.74e-20 | 95.9 |
Find 169 sgRNAs with CRISPR-Local
Find 791 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATGATTGCATCTGCTTTAA+AGG | 0.106875 | 4_4:-14184398 | None:intergenic |
GGGATCTAGCATAAAATTTA+TGG | 0.155857 | 4_4:-14190353 | None:intergenic |
CACATTTACGCGCAGGATTA+TGG | 0.195776 | 4_4:+14183725 | Msa0671200:intron |
AAATAGTCGACTCGTTAATT+TGG | 0.198468 | 4_4:+14186656 | Msa0671200:CDS |
TAAATTCGTTGCACGGTTAT+AGG | 0.211881 | 4_4:-14180360 | None:intergenic |
TATAACCGTGCAACGAATTT+AGG | 0.222382 | 4_4:+14180362 | Msa0671200:five_prime_UTR |
CTTTCCAACTTAAACTTACT+TGG | 0.226606 | 4_4:-14182291 | None:intergenic |
AAATTCGTTGCACGGTTATA+GGG | 0.247547 | 4_4:-14180359 | None:intergenic |
AGCATCAGGTTCAACATCTA+TGG | 0.265308 | 4_4:-14182883 | None:intergenic |
CGCAATAGGAAAACGCTTAC+AGG | 0.271564 | 4_4:+14183037 | Msa0671200:CDS |
TCAAATATAGCTAGATGTTT+TGG | 0.284083 | 4_4:+14191375 | Msa0671200:CDS |
AATAACATTATTTACATGTT+TGG | 0.295463 | 4_4:-14182919 | None:intergenic |
CTCCCGAGTCTCTTGTAAAA+TGG | 0.296494 | 4_4:+14188168 | Msa0671200:CDS |
ATACATCCAGCAAGGACTTT+TGG | 0.299091 | 4_4:-14183833 | None:intergenic |
ACATTCCTCATGCATATATA+TGG | 0.304700 | 4_4:+14186773 | Msa0671200:CDS |
TAAAGCAACAAGCTGGTTAT+AGG | 0.307719 | 4_4:+14186533 | Msa0671200:CDS |
GAAAGTAGTTCTTCAAAATC+AGG | 0.312165 | 4_4:+14180588 | Msa0671200:CDS |
TTCATTTGATTTCTCTGAAC+AGG | 0.322157 | 4_4:-14184316 | None:intergenic |
AATAAAGGATGGGGAGGTCT+TGG | 0.336180 | 4_4:+14189743 | Msa0671200:CDS |
AAAATTCAAGATAATACTAT+TGG | 0.339192 | 4_4:+14191710 | Msa0671200:three_prime_UTR |
ATGCCAAGTTGGTTTAGTTT+AGG | 0.346975 | 4_4:+14191683 | Msa0671200:three_prime_UTR |
GAAAATGAGGATGGGGTAAC+TGG | 0.354917 | 4_4:+14191273 | Msa0671200:CDS |
GAACCTGATGCTCTTGGTGC+TGG | 0.371885 | 4_4:+14182894 | Msa0671200:CDS |
ATAAAGGATGGGGAGGTCTT+GGG | 0.373464 | 4_4:+14189744 | Msa0671200:CDS |
TCTGTTTCCAATGCTATTAA+CGG | 0.374174 | 4_4:+14180564 | Msa0671200:CDS |
ATGATTGCATCTGCTTTAAA+GGG | 0.375168 | 4_4:-14184397 | None:intergenic |
GTACGACGCGCGCGAGATTC+CGG | 0.376591 | 4_4:-14180394 | None:intergenic |
AATATGAATTGGAATTTGTA+AGG | 0.391265 | 4_4:-14186296 | None:intergenic |
GGAAGCGAAAACTCGTCAAC+TGG | 0.393586 | 4_4:-14190316 | None:intergenic |
TTACATTGGGTTTGGTAGCC+TGG | 0.397683 | 4_4:+14188214 | Msa0671200:CDS |
CGAATTTAGGTCGCATTCAC+CGG | 0.401513 | 4_4:+14180375 | Msa0671200:five_prime_UTR |
GGCGATCCAAAAGTCCTTGC+TGG | 0.401590 | 4_4:+14183827 | Msa0671200:CDS |
GTCGACTCGTTAATTTGGCT+TGG | 0.402916 | 4_4:+14186661 | Msa0671200:CDS |
TAAAGAACCTGATATTGATT+CGG | 0.403186 | 4_4:+14184369 | Msa0671200:CDS |
GGGATTAGACCGCATGTATC+TGG | 0.414358 | 4_4:-14191637 | None:intergenic |
CAGAGAGGCATCATCAATAA+AGG | 0.416569 | 4_4:+14189728 | Msa0671200:CDS |
GTCGTACACGACGGCGGAAA+TGG | 0.420386 | 4_4:+14180410 | Msa0671200:exon |
CTTGGTAGTGCTTTCGCTGT+TGG | 0.421034 | 4_4:-14180520 | None:intergenic |
TGACCAGCTTGCACTGGATC+AGG | 0.421237 | 4_4:-14191403 | None:intergenic |
TAATAACAAAATTCCTGTAC+AGG | 0.421966 | 4_4:+14182368 | Msa0671200:CDS |
AAGCCGATTTACATTGGGTT+TGG | 0.425126 | 4_4:+14188206 | Msa0671200:CDS |
ACTTAATTATAATCAACAAA+AGG | 0.425988 | 4_4:-14191658 | None:intergenic |
GGAGCAGGAACAACAGCTGC+AGG | 0.428556 | 4_4:+14190110 | Msa0671200:CDS |
AAAATTTGTGCTGCATCCTC+AGG | 0.433469 | 4_4:-14182345 | None:intergenic |
TGGATAATGTTCCCCATGAT+TGG | 0.434419 | 4_4:+14189876 | Msa0671200:CDS |
CAAAATTCCTGTACAGGAAA+AGG | 0.437724 | 4_4:+14182374 | Msa0671200:CDS |
AATATAGTGATGCTTATTGT+TGG | 0.439998 | 4_4:+14182987 | Msa0671200:CDS |
AAAGAACCTGATATTGATTC+GGG | 0.440384 | 4_4:+14184370 | Msa0671200:CDS |
ATGTACTCTCTCACCCCAAA+AGG | 0.446704 | 4_4:-14190266 | None:intergenic |
CTTAATTATAATCAACAAAA+GGG | 0.447375 | 4_4:-14191657 | None:intergenic |
CTACCAAACCCAATGTAAAT+CGG | 0.447578 | 4_4:-14188209 | None:intergenic |
AAAGGACTCTATATACTTGT+TGG | 0.449349 | 4_4:+14189856 | Msa0671200:CDS |
TTGTAAGGCCTCTGCGACAT+GGG | 0.451316 | 4_4:-14186281 | None:intergenic |
GGGACACCCGAATCAATATC+AGG | 0.456903 | 4_4:-14184376 | None:intergenic |
GATCCAGCACCAAGAGCATC+AGG | 0.457284 | 4_4:-14182897 | None:intergenic |
AACAAGTATATAGAGTCCTT+TGG | 0.457917 | 4_4:-14189854 | None:intergenic |
TTTATGGCATCAATCAACTT+AGG | 0.459700 | 4_4:-14190337 | None:intergenic |
CAAGAAAGTATACCATATGC+TGG | 0.460319 | 4_4:-14184430 | None:intergenic |
AGTATTATCCACAACTTCCT+TGG | 0.464782 | 4_4:-14180538 | None:intergenic |
ATCTTCTTCAAGCGATCGAT+CGG | 0.466243 | 4_4:+14180473 | Msa0671200:CDS |
ACTTTCACCGTTAATAGCAT+TGG | 0.466940 | 4_4:-14180571 | None:intergenic |
GTGACAAGCCGATTTACATT+GGG | 0.467971 | 4_4:+14188201 | Msa0671200:CDS |
GCGGTCTGACCAGCTTGCAC+TGG | 0.468068 | 4_4:-14191409 | None:intergenic |
TATTTAGGCATTCCGAGCAC+GGG | 0.468115 | 4_4:+14182207 | Msa0671200:intron |
GTACAGCCATTTGTCGCAAT+AGG | 0.469796 | 4_4:+14183023 | Msa0671200:CDS |
GACAGCACGGAAATATAGAT+TGG | 0.471093 | 4_4:-14191457 | None:intergenic |
ACAAATAATTGTAGAAGCAC+TGG | 0.471461 | 4_4:+14189694 | Msa0671200:CDS |
ATATTTGAGAAACAACTAGA+TGG | 0.475374 | 4_4:-14191360 | None:intergenic |
AATAAGGGCTTTCTTCCATC+GGG | 0.477438 | 4_4:+14184280 | Msa0671200:CDS |
CAGAGCGGCAGAGACATCTA+AGG | 0.480999 | 4_4:+14182322 | Msa0671200:CDS |
AAATAAGGGCTTTCTTCCAT+CGG | 0.483407 | 4_4:+14184279 | Msa0671200:CDS |
GAGACATGATTAATGATCTT+CGG | 0.484868 | 4_4:+14186689 | Msa0671200:CDS |
CTTTAAAGCAGATGCAATCA+TGG | 0.486667 | 4_4:+14184399 | Msa0671200:CDS |
ATAAGCATCACTATATTCAA+TGG | 0.493905 | 4_4:-14182981 | None:intergenic |
AGATGGCTCTGTGTTAGTCT+CGG | 0.496643 | 4_4:-14191337 | None:intergenic |
TAATTAAGTGTATGCCAAGT+TGG | 0.497356 | 4_4:+14191672 | Msa0671200:three_prime_UTR |
CATCTTGTTCCTAAACCAAA+AGG | 0.500484 | 4_4:+14186802 | Msa0671200:CDS |
AAGTCCAAGTAAGTTTAAGT+TGG | 0.500706 | 4_4:+14182287 | Msa0671200:CDS |
TGCCAAAGCTATGGAAAATG+AGG | 0.501279 | 4_4:+14191260 | Msa0671200:CDS |
GATGGCTCTGTGTTAGTCTC+GGG | 0.503225 | 4_4:-14191336 | None:intergenic |
CGACCAGTCACATATTTAAG+TGG | 0.511895 | 4_4:+14186730 | Msa0671200:CDS |
GGTGACAAGCCGATTTACAT+TGG | 0.512372 | 4_4:+14188200 | Msa0671200:CDS |
TAGGTGCATCATGGAGGAGC+AGG | 0.514132 | 4_4:+14190095 | Msa0671200:intron |
GAAAACTCGTCAACTGGGAT+AGG | 0.515281 | 4_4:-14190310 | None:intergenic |
TCTCCATGGGATACATCTAC+TGG | 0.517942 | 4_4:-14182252 | None:intergenic |
GGTGAGAGAGTACATGATAG+AGG | 0.520986 | 4_4:+14190274 | Msa0671200:CDS |
AAAAGCATTACACAGGTACA+AGG | 0.521148 | 4_4:-14191566 | None:intergenic |
GTATTTAGGCATTCCGAGCA+CGG | 0.521904 | 4_4:+14182206 | Msa0671200:intron |
TAAAGGATGGGGAGGTCTTG+GGG | 0.523194 | 4_4:+14189745 | Msa0671200:CDS |
TCGTCAACTGGGATAGGTGG+AGG | 0.525360 | 4_4:-14190304 | None:intergenic |
AAGAAAGTATACCATATGCT+GGG | 0.526798 | 4_4:-14184429 | None:intergenic |
CAAGTAAGTTTAAGTTGGAA+AGG | 0.532012 | 4_4:+14182292 | Msa0671200:CDS |
CTTGTAAAATGGCTTGAAGA+TGG | 0.533465 | 4_4:+14188179 | Msa0671200:CDS |
AAAGCAACAAGCTGGTTATA+GGG | 0.535295 | 4_4:+14186534 | Msa0671200:CDS |
AAAAGTGTTGGAATAGTTTG+TGG | 0.536475 | 4_4:-14180303 | None:intergenic |
TTTGTAAGGCCTCTGCGACA+TGG | 0.537363 | 4_4:-14186282 | None:intergenic |
ATACCTAAACTAAACCAACT+TGG | 0.538344 | 4_4:-14191686 | None:intergenic |
AACTCGTCAACTGGGATAGG+TGG | 0.539725 | 4_4:-14190307 | None:intergenic |
TCAATGGAGGGATGTAATCA+AGG | 0.541268 | 4_4:-14182965 | None:intergenic |
AGAGTACATGATAGAGGAGT+CGG | 0.543698 | 4_4:+14190280 | Msa0671200:CDS |
AATAGTTTGTGGGGTGAAGA+AGG | 0.548092 | 4_4:-14180292 | None:intergenic |
ACTTTAGACAACCCCGTGCT+CGG | 0.548450 | 4_4:-14182219 | None:intergenic |
ATATCAGGTTCTTTACATGC+AGG | 0.549794 | 4_4:-14184361 | None:intergenic |
TGTACTCTCTCACCCCAAAA+GGG | 0.555500 | 4_4:-14190265 | None:intergenic |
GCATCAGGTTCAACATCTAT+GGG | 0.555937 | 4_4:-14182882 | None:intergenic |
GATGTTGAACCTGATGCTCT+TGG | 0.556989 | 4_4:+14182888 | Msa0671200:CDS |
GAGGCATCATCAATAAAGGA+TGG | 0.557400 | 4_4:+14189732 | Msa0671200:CDS |
AGGCATCATCAATAAAGGAT+GGG | 0.559831 | 4_4:+14189733 | Msa0671200:CDS |
AATTGAACTTGCCAAAGCTA+TGG | 0.566850 | 4_4:+14191251 | Msa0671200:CDS |
ACCTAGATTACTTACGTCCA+TGG | 0.567184 | 4_4:-14186331 | None:intergenic |
AGCTATGGAAAATGAGGATG+GGG | 0.568155 | 4_4:+14191266 | Msa0671200:CDS |
ATTCCTGATCCAGTGCAAGC+TGG | 0.573829 | 4_4:+14191400 | Msa0671200:exon |
GAAGAACGGCGGCGATTCTG+CGG | 0.575342 | 4_4:-14180441 | None:intergenic |
AGACCGCATGTATCTGGTCA+TGG | 0.577144 | 4_4:-14191631 | None:intergenic |
AAAGTGTTGGAATAGTTTGT+GGG | 0.578068 | 4_4:-14180302 | None:intergenic |
AAAGCTATGGAAAATGAGGA+TGG | 0.580480 | 4_4:+14191264 | Msa0671200:CDS |
AATTCGTTGCACGGTTATAG+GGG | 0.580592 | 4_4:-14180358 | None:intergenic |
GGCATCATCAATAAAGGATG+GGG | 0.581975 | 4_4:+14189734 | Msa0671200:CDS |
ACATATTTAAGTGGCTCACA+AGG | 0.582563 | 4_4:+14186739 | Msa0671200:CDS |
GGATGTGGAAAGTCAGCTGT+TGG | 0.583601 | 4_4:-14186499 | None:intergenic |
AAGCACTACCAAGGAAGTTG+TGG | 0.583970 | 4_4:+14180530 | Msa0671200:CDS |
TCTCGTGTAAAGCAACAAGC+TGG | 0.588206 | 4_4:+14186526 | Msa0671200:CDS |
CTCTGAACAGGTATCTCAGA+GGG | 0.588857 | 4_4:-14184304 | None:intergenic |
AAGCTATGGAAAATGAGGAT+GGG | 0.596673 | 4_4:+14191265 | Msa0671200:CDS |
AGCATCACTATATTCAATGG+AGG | 0.600366 | 4_4:-14182978 | None:intergenic |
AAGATGAACTTGAAGAAGAA+CGG | 0.602390 | 4_4:-14180455 | None:intergenic |
TGCGACCTAAATTCGTTGCA+CGG | 0.605297 | 4_4:-14180367 | None:intergenic |
TGTAGAAGCACTGGAAACCA+CGG | 0.606828 | 4_4:+14189703 | Msa0671200:CDS |
TTTCCCAGTGACAGAACCAA+AGG | 0.607256 | 4_4:+14189838 | Msa0671200:intron |
GCATCACTATATTCAATGGA+GGG | 0.608601 | 4_4:-14182977 | None:intergenic |
TGTTGCTTTACACGAGACAA+AGG | 0.610672 | 4_4:-14186520 | None:intergenic |
GAGAAACAACTAGATGGAGA+TGG | 0.612917 | 4_4:-14191354 | None:intergenic |
TTTACACGAGACAAAGGATG+TGG | 0.614796 | 4_4:-14186514 | None:intergenic |
GAAGCGAAAACTCGTCAACT+GGG | 0.615288 | 4_4:-14190315 | None:intergenic |
AGAAAGTATACCATATGCTG+GGG | 0.621182 | 4_4:-14184428 | None:intergenic |
TTTGGTTTAGGAACAAGATG+AGG | 0.623316 | 4_4:-14186799 | None:intergenic |
TGCTAATATTCTATGTGGTG+CGG | 0.624936 | 4_4:-14180269 | None:intergenic |
ATCATCAATAAAGGATGGGG+AGG | 0.625136 | 4_4:+14189737 | Msa0671200:CDS |
GGTATCTCAGAGGGTCCCGA+TGG | 0.626655 | 4_4:-14184295 | None:intergenic |
TGATTGCATCTGCTTTAAAG+GGG | 0.630864 | 4_4:-14184396 | None:intergenic |
ATTTAGGCATTCCGAGCACG+GGG | 0.632997 | 4_4:+14182208 | Msa0671200:intron |
CGTCAACTGGGATAGGTGGA+GGG | 0.633125 | 4_4:-14190303 | None:intergenic |
GAGCAGGAACAACAGCTGCA+GGG | 0.634133 | 4_4:+14190111 | Msa0671200:CDS |
CTCGCGCGCGTCGTACACGA+CGG | 0.635581 | 4_4:+14180401 | Msa0671200:five_prime_UTR |
GATGATGCCTCTCTGTCCCG+TGG | 0.637290 | 4_4:-14189720 | None:intergenic |
TTGCCAGTAGATGTATCCCA+TGG | 0.638199 | 4_4:+14182249 | Msa0671200:CDS |
GTACACGACGGCGGAAATGG+CGG | 0.638539 | 4_4:+14180413 | Msa0671200:exon |
ATGCTTATTGTTGGTACACG+AGG | 0.640971 | 4_4:+14182996 | Msa0671200:CDS |
GAGCCACTTAAATATGTGAC+TGG | 0.642352 | 4_4:-14186733 | None:intergenic |
GTAGAAGCACTGGAAACCAC+GGG | 0.650496 | 4_4:+14189704 | Msa0671200:CDS |
AAAGAACAAAAGCATTACAC+AGG | 0.650752 | 4_4:-14191573 | None:intergenic |
AAAGCATTACACAGGTACAA+GGG | 0.667107 | 4_4:-14191565 | None:intergenic |
TCACCATGACCAGATACATG+CGG | 0.671918 | 4_4:+14191628 | Msa0671200:three_prime_UTR |
CGTAGTACATACATCCAGCA+AGG | 0.672886 | 4_4:-14183841 | None:intergenic |
CAACAGCGAAAGCACTACCA+AGG | 0.672888 | 4_4:+14180521 | Msa0671200:CDS |
GGACTCCATATATATGCATG+AGG | 0.673554 | 4_4:-14186778 | None:intergenic |
GGATACATCTACTGGCAATG+TGG | 0.682659 | 4_4:-14182244 | None:intergenic |
AGGGCATACCCATGTCGCAG+AGG | 0.684256 | 4_4:+14186273 | Msa0671200:intron |
GAAGGTGCTAATATTCTATG+TGG | 0.684453 | 4_4:-14180274 | None:intergenic |
GCAGAGACATCTAAGGCCTG+AGG | 0.684529 | 4_4:+14182329 | Msa0671200:CDS |
AAGTGTTGGAATAGTTTGTG+GGG | 0.687419 | 4_4:-14180301 | None:intergenic |
GCGCGCGTCGTACACGACGG+CGG | 0.692303 | 4_4:+14180404 | Msa0671200:five_prime_UTR |
CTGGAAACCACGGGACAGAG+AGG | 0.715104 | 4_4:+14189713 | Msa0671200:CDS |
TCTCTGAACAGGTATCTCAG+AGG | 0.717964 | 4_4:-14184305 | None:intergenic |
GAAAGTATACCATATGCTGG+GGG | 0.718769 | 4_4:-14184427 | None:intergenic |
ATAGCTACCGTAAAAGACGA+CGG | 0.733687 | 4_4:+14182840 | Msa0671200:CDS |
AATGTTATTGATGATTCACA+TGG | 0.734188 | 4_4:+14182933 | Msa0671200:CDS |
ATGAACTTGAAGAAGAACGG+CGG | 0.744439 | 4_4:-14180452 | None:intergenic |
GAGTTGCTAATCTAACACGA+TGG | 0.756555 | 4_4:-14183748 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CGATATTTATAAAATTAATT+TGG | + | chr4_4:14180997-14181016 | Msa0671200:intron | 10.0% |
!! | TATATATAATTTCTTTAATG+AGG | + | chr4_4:14181223-14181242 | Msa0671200:intron | 10.0% |
!! | CTATTATAAATAAAAAACTT+GGG | - | chr4_4:14181561-14181580 | None:intergenic | 10.0% |
!! | TCTATTATAAATAAAAAACT+TGG | - | chr4_4:14181562-14181581 | None:intergenic | 10.0% |
!!! | TAAATAAATTTATTTCTTCA+CGG | - | chr4_4:14181951-14181970 | None:intergenic | 10.0% |
!!! | TCAATTTTACTAAATTAATA+GGG | - | chr4_4:14182056-14182075 | None:intergenic | 10.0% |
!!! | ATCAATTTTACTAAATTAAT+AGG | - | chr4_4:14182057-14182076 | None:intergenic | 10.0% |
!!! | TACTTACATTTTTTATAATA+TGG | + | chr4_4:14184454-14184473 | Msa0671200:intron | 10.0% |
!! | AATAAATGATTTATATATGT+TGG | + | chr4_4:14187004-14187023 | Msa0671200:intron | 10.0% |
!!! | TTAATAACTTATATTTTTTG+TGG | + | chr4_4:14190203-14190222 | Msa0671200:intron | 10.0% |
!!! | ATTAAATTTTTATTTACCTT+GGG | - | chr4_4:14190376-14190395 | None:intergenic | 10.0% |
!!! | AATTAAATTTTTATTTACCT+TGG | - | chr4_4:14190377-14190396 | None:intergenic | 10.0% |
!!! | ATGATTTTGTTTTTACTTTT+TGG | + | chr4_4:14180801-14180820 | Msa0671200:intron | 15.0% |
!!! | AATTAATTTGGTAAAATTAG+CGG | + | chr4_4:14181009-14181028 | Msa0671200:intron | 15.0% |
!! | GAATTATATTAAAATTCAGA+GGG | - | chr4_4:14182091-14182110 | None:intergenic | 15.0% |
!! | TGAATTATATTAAAATTCAG+AGG | - | chr4_4:14182092-14182111 | None:intergenic | 15.0% |
!!! | TACAAATATTTAACACTTTT+AGG | - | chr4_4:14182485-14182504 | None:intergenic | 15.0% |
!! | TTAAATATTTGTATGTATGT+TGG | + | chr4_4:14182492-14182511 | Msa0671200:intron | 15.0% |
!!! | AGAATTTTTTATTTCAATTG+GGG | - | chr4_4:14182537-14182556 | None:intergenic | 15.0% |
!!! | GAGAATTTTTTATTTCAATT+GGG | - | chr4_4:14182538-14182557 | None:intergenic | 15.0% |
!! | TAATAATTTAACAAAAGCTA+TGG | - | chr4_4:14182715-14182734 | None:intergenic | 15.0% |
!! | ATTAAAAACAACAATAAAGA+TGG | - | chr4_4:14182793-14182812 | None:intergenic | 15.0% |
!! | AATAACATTATTTACATGTT+TGG | - | chr4_4:14182922-14182941 | None:intergenic | 15.0% |
!! | TATTATTGTTAACAAAATTG+AGG | + | chr4_4:14183694-14183713 | Msa0671200:intron | 15.0% |
!!! | AACTATTTTCAATAACTTAT+TGG | - | chr4_4:14184080-14184099 | None:intergenic | 15.0% |
!! | AATAAGTTATTGAAAATAGT+TGG | + | chr4_4:14184079-14184098 | Msa0671200:intron | 15.0% |
!! | ATAAGTTATTGAAAATAGTT+GGG | + | chr4_4:14184080-14184099 | Msa0671200:intron | 15.0% |
!!! | TACATTTTTTATAATATGGT+TGG | + | chr4_4:14184458-14184477 | Msa0671200:intron | 15.0% |
!!! | GCAAAATATTTTTTAGATTA+GGG | - | chr4_4:14185121-14185140 | None:intergenic | 15.0% |
!!! | TGCAAAATATTTTTTAGATT+AGG | - | chr4_4:14185122-14185141 | None:intergenic | 15.0% |
!! | ATCATAAAAGTAGAAAAAAT+AGG | - | chr4_4:14186183-14186202 | None:intergenic | 15.0% |
!! | ACTGTTAAATACTTAAAATA+GGG | + | chr4_4:14186254-14186273 | Msa0671200:intron | 15.0% |
!! | ATTGTGAAAAAAATATGAAT+TGG | - | chr4_4:14186310-14186329 | None:intergenic | 15.0% |
!!! | TTGTTTACTAATTTTTCTTT+TGG | + | chr4_4:14186397-14186416 | Msa0671200:intron | 15.0% |
!! | GATCAATATTAAATCAAATA+TGG | - | chr4_4:14186610-14186629 | None:intergenic | 15.0% |
!!! | ATTGCTGTTTTTATAATTTT+GGG | + | chr4_4:14186888-14186907 | Msa0671200:intron | 15.0% |
!!! | CAAATTTTAATGGAATAATA+AGG | - | chr4_4:14187361-14187380 | None:intergenic | 15.0% |
!!! | TTAAAAATATAGTTGATATG+AGG | - | chr4_4:14187883-14187902 | None:intergenic | 15.0% |
!! | AAAAAACTAATAACAATGAA+GGG | - | chr4_4:14187980-14187999 | None:intergenic | 15.0% |
!! | TAAAAAACTAATAACAATGA+AGG | - | chr4_4:14187981-14188000 | None:intergenic | 15.0% |
!!! | TCATTGTTATTAGTTTTTTA+AGG | + | chr4_4:14187981-14188000 | Msa0671200:intron | 15.0% |
!!! | CATTGTTATTAGTTTTTTAA+GGG | + | chr4_4:14187982-14188001 | Msa0671200:intron | 15.0% |
!!! | TTATTTTTTTATTTGCAGAT+TGG | + | chr4_4:14188087-14188106 | Msa0671200:intron | 15.0% |
!!! | TATTTTTTTATTTGCAGATT+GGG | + | chr4_4:14188088-14188107 | Msa0671200:intron | 15.0% |
!!! | ATATGAATTTATACACATTT+TGG | + | chr4_4:14188591-14188610 | Msa0671200:intron | 15.0% |
!!! | TTTTTTTATGCATTTTTTGT+AGG | + | chr4_4:14190076-14190095 | Msa0671200:intron | 15.0% |
!!! | TATGTTTGAAACTTATTATT+TGG | + | chr4_4:14191041-14191060 | Msa0671200:intron | 15.0% |
!!! | ATTATTTGGTTTATATTTGT+TGG | + | chr4_4:14191055-14191074 | Msa0671200:intron | 15.0% |
!! | CTTAATTATAATCAACAAAA+GGG | - | chr4_4:14191660-14191679 | None:intergenic | 15.0% |
!! | ACTTAATTATAATCAACAAA+AGG | - | chr4_4:14191661-14191680 | None:intergenic | 15.0% |
!! | AAAATTCAAGATAATACTAT+TGG | + | chr4_4:14191710-14191729 | Msa0671200:three_prime_UTR | 15.0% |
!!! | TTGTTTTTACTTTTTGGTTT+TGG | + | chr4_4:14180807-14180826 | Msa0671200:intron | 20.0% |
!! | CTTTCTTTCACTTATAATTT+AGG | + | chr4_4:14181035-14181054 | Msa0671200:intron | 20.0% |
!! | TTTCTTTCACTTGTAATTTA+CGG | - | chr4_4:14181068-14181087 | None:intergenic | 20.0% |
!! | TGATACATTTGCTTATTTAA+CGG | - | chr4_4:14181095-14181114 | None:intergenic | 20.0% |
!!! | AATTAATTTTGGAAGAATGA+CGG | + | chr4_4:14181147-14181166 | Msa0671200:intron | 20.0% |
!! | ATAAATAAAAAACTTGGGTT+GGG | - | chr4_4:14181556-14181575 | None:intergenic | 20.0% |
!! | TATAAATAAAAAACTTGGGT+TGG | - | chr4_4:14181557-14181576 | None:intergenic | 20.0% |
!! | AACATGTTTATACATGATAA+TGG | - | chr4_4:14181729-14181748 | None:intergenic | 20.0% |
!! | AATATTATTATTTGCTTCAG+TGG | + | chr4_4:14181778-14181797 | Msa0671200:intron | 20.0% |
!!! | CGAGAATTTTTTATTTCAAT+TGG | - | chr4_4:14182539-14182558 | None:intergenic | 20.0% |
!! | TAAAAAATTCTCGTTATGTT+TGG | + | chr4_4:14182546-14182565 | Msa0671200:intron | 20.0% |
!! | AAGGAAAAGAAAATAAGTTA+TGG | - | chr4_4:14182745-14182764 | None:intergenic | 20.0% |
!! | ATAAAAACTCAACTAAAGAT+GGG | - | chr4_4:14183581-14183600 | None:intergenic | 20.0% |
!! | AATAAAAACTCAACTAAAGA+TGG | - | chr4_4:14183582-14183601 | None:intergenic | 20.0% |
!! | TTTACTCAAATCAAATGATA+TGG | + | chr4_4:14184205-14184224 | Msa0671200:intron | 20.0% |
!!! | TAATCTCTTATCTTTTTTAC+TGG | - | chr4_4:14184862-14184881 | None:intergenic | 20.0% |
!!! | AATTTTGTTTTTATCGCTTA+CGG | - | chr4_4:14185072-14185091 | None:intergenic | 20.0% |
!! | ATGTACTATTAAACTATTCA+TGG | + | chr4_4:14185588-14185607 | Msa0671200:intron | 20.0% |
!! | CACTGTTAAATACTTAAAAT+AGG | + | chr4_4:14186253-14186272 | Msa0671200:intron | 20.0% |
!! | AATATGAATTGGAATTTGTA+AGG | - | chr4_4:14186299-14186318 | None:intergenic | 20.0% |
!! | ATTAGTAAACAAAAGACTTA+AGG | - | chr4_4:14186389-14186408 | None:intergenic | 20.0% |
!!! | TCTTTTGGTTCTTTTAAAAT+TGG | + | chr4_4:14186412-14186431 | Msa0671200:intron | 20.0% |
!! | AAATACAAAGAATGAACATT+AGG | - | chr4_4:14186841-14186860 | None:intergenic | 20.0% |
!!! | CATTGCTGTTTTTATAATTT+TGG | + | chr4_4:14186887-14186906 | Msa0671200:intron | 20.0% |
!!! | AAAGTATTCTCCTAAATATA+TGG | - | chr4_4:14187036-14187055 | None:intergenic | 20.0% |
!! | ATTAGTGTTTACAACTTATA+TGG | + | chr4_4:14187135-14187154 | Msa0671200:intron | 20.0% |
!! | TTAGTGTTTACAACTTATAT+GGG | + | chr4_4:14187136-14187155 | Msa0671200:intron | 20.0% |
!! | ATTAAAATTTGTCTATGCTT+CGG | + | chr4_4:14187370-14187389 | Msa0671200:intron | 20.0% |
!! | TATTGAATCTTAATAGAGTT+TGG | + | chr4_4:14187401-14187420 | Msa0671200:intron | 20.0% |
!! | ATTGAATCTTAATAGAGTTT+GGG | + | chr4_4:14187402-14187421 | Msa0671200:intron | 20.0% |
!!! | CAACTATATTTTTAACAAGT+TGG | + | chr4_4:14187888-14187907 | Msa0671200:intron | 20.0% |
!!! | ATTTTTTTATTTGCAGATTG+GGG | + | chr4_4:14188089-14188108 | Msa0671200:intron | 20.0% |
!! | ATATAACTAACCAAAAATGA+CGG | - | chr4_4:14188554-14188573 | None:intergenic | 20.0% |
!!! | CAAGTATCTTTAAGTTAATA+AGG | - | chr4_4:14188754-14188773 | None:intergenic | 20.0% |
!! | GATTTATAAATGGATATTGT+TGG | - | chr4_4:14189259-14189278 | None:intergenic | 20.0% |
!! | CCATATAAGTGATTTATAAA+TGG | - | chr4_4:14189269-14189288 | None:intergenic | 20.0% |
!! | CCATTTATAAATCACTTATA+TGG | + | chr4_4:14189266-14189285 | Msa0671200:intron | 20.0% |
!! | ATAAATCACTTATATGGATT+TGG | + | chr4_4:14189272-14189291 | Msa0671200:intron | 20.0% |
!!! | AGAGAAATTATTTGTTATGT+AGG | - | chr4_4:14189584-14189603 | None:intergenic | 20.0% |
!! | GTTAAGTATATATAAAGAGA+GGG | - | chr4_4:14189633-14189652 | None:intergenic | 20.0% |
!! | AGTTAAGTATATATAAAGAG+AGG | - | chr4_4:14189634-14189653 | None:intergenic | 20.0% |
!!! | ATTATTTGTGTCATCTTTTT+TGG | - | chr4_4:14189683-14189702 | None:intergenic | 20.0% |
!!! | CTTGGTTCATTATTTTTTAA+AGG | + | chr4_4:14189946-14189965 | Msa0671200:intron | 20.0% |
!! | AAACGATATCATATTTACTA+GGG | - | chr4_4:14190173-14190192 | None:intergenic | 20.0% |
!!! | CTGATACACATAAAATTTTA+AGG | - | chr4_4:14190401-14190420 | None:intergenic | 20.0% |
!!! | TTATGTTAAAGTACTTTTGT+TGG | - | chr4_4:14190870-14190889 | None:intergenic | 20.0% |
!! | ATTGATCTTGTATTACTAAT+GGG | - | chr4_4:14191008-14191027 | None:intergenic | 20.0% |
!! | AATTGATCTTGTATTACTAA+TGG | - | chr4_4:14191009-14191028 | None:intergenic | 20.0% |
!! | TCGAAAAAATGAAAAAGTGT+TGG | - | chr4_4:14180318-14180337 | None:intergenic | 25.0% |
! | GTTAATGACGTGAAAAAATA+TGG | + | chr4_4:14180853-14180872 | Msa0671200:intron | 25.0% |
! | ACACTTCAAAATTTATCTTG+TGG | - | chr4_4:14180880-14180899 | None:intergenic | 25.0% |
! | AATATCGGTATATACATCAT+TGG | - | chr4_4:14180984-14181003 | None:intergenic | 25.0% |
!!! | GTGTAAAGTAGTTTTACATT+AGG | + | chr4_4:14181266-14181285 | Msa0671200:intron | 25.0% |
!!! | TAAAGTAGTTTTACATTAGG+CGG | + | chr4_4:14181269-14181288 | Msa0671200:intron | 25.0% |
! | ATTCTCATATCTATGAGAAT+CGG | - | chr4_4:14181302-14181321 | None:intergenic | 25.0% |
! | ATAGATATGAGAATGTTTGA+TGG | + | chr4_4:14181308-14181327 | Msa0671200:intron | 25.0% |
! | GATCATTAGAGAGAAAATTA+TGG | + | chr4_4:14181369-14181388 | Msa0671200:intron | 25.0% |
! | ACTTGCCATTGTAAAAAAAA+CGG | + | chr4_4:14181393-14181412 | Msa0671200:intron | 25.0% |
!! | AAAAACGGTAGTCTTTTATT+AGG | + | chr4_4:14181408-14181427 | Msa0671200:intron | 25.0% |
!! | ATTAGGTGGATTTATCATTA+AGG | + | chr4_4:14181425-14181444 | Msa0671200:intron | 25.0% |
!!! | TGTCTTTTTTCTCATTTTGA+TGG | - | chr4_4:14181592-14181611 | None:intergenic | 25.0% |
! | AAATGAGAAAAAAGACACTA+AGG | + | chr4_4:14181595-14181614 | Msa0671200:intron | 25.0% |
! | TCATGTATAAACATGTTCAA+TGG | + | chr4_4:14181732-14181751 | Msa0671200:intron | 25.0% |
!!! | GTTCTAGAACGAAATTAATT+CGG | - | chr4_4:14181838-14181857 | None:intergenic | 25.0% |
! | ATTTATTTAAGAGAAACCAG+AGG | + | chr4_4:14181962-14181981 | Msa0671200:intron | 25.0% |
!! | AATTAATAGGGTTTCACTTT+TGG | - | chr4_4:14182044-14182063 | None:intergenic | 25.0% |
!!! | AATTTTAGCTCTAACTATGA+TGG | + | chr4_4:14182168-14182187 | Msa0671200:intron | 25.0% |
! | TAATAACAAAATTCCTGTAC+AGG | + | chr4_4:14182368-14182387 | Msa0671200:CDS | 25.0% |
!! | AATGTTATTGATGATTCACA+TGG | + | chr4_4:14182933-14182952 | Msa0671200:CDS | 25.0% |
! | ATAAGCATCACTATATTCAA+TGG | - | chr4_4:14182984-14183003 | None:intergenic | 25.0% |
! | AATATAGTGATGCTTATTGT+TGG | + | chr4_4:14182987-14183006 | Msa0671200:CDS | 25.0% |
! | TGAAAAGAGATATACATAAC+AGG | - | chr4_4:14183231-14183250 | None:intergenic | 25.0% |
! | TTGTTCTAATAAAAGCAACA+AGG | - | chr4_4:14183275-14183294 | None:intergenic | 25.0% |
!!! | TTGTTGCTTTTATTAGAACA+AGG | + | chr4_4:14183274-14183293 | Msa0671200:intron | 25.0% |
!!! | ATAATAACTTTGAGGCTTTT+TGG | + | chr4_4:14183417-14183436 | Msa0671200:intron | 25.0% |
! | CTCTTAGTTTATAAGTTTGA+AGG | - | chr4_4:14183503-14183522 | None:intergenic | 25.0% |
!!! | ATATCATATGTTTTTGTCAG+AGG | - | chr4_4:14183633-14183652 | None:intergenic | 25.0% |
!! | AGCAACTCATTCAAATTTTA+AGG | + | chr4_4:14183763-14183782 | Msa0671200:CDS | 25.0% |
! | ATATTTAATTGCTTAACCAC+TGG | - | chr4_4:14184027-14184046 | None:intergenic | 25.0% |
! | TGGTTAAGCAATTAAATATG+TGG | + | chr4_4:14184028-14184047 | Msa0671200:intron | 25.0% |
! | GGTTAAGCAATTAAATATGT+GGG | + | chr4_4:14184029-14184048 | Msa0671200:intron | 25.0% |
! | AAATCATTTACGTAGTTGTA+GGG | - | chr4_4:14184187-14184206 | None:intergenic | 25.0% |
! | AAAATCATTTACGTAGTTGT+AGG | - | chr4_4:14184188-14184207 | None:intergenic | 25.0% |
!! | TTTTTATGCTTTTGCAGATA+TGG | + | chr4_4:14184252-14184271 | Msa0671200:intron | 25.0% |
! | TGCAGATATGGTTAAAAATA+AGG | + | chr4_4:14184264-14184283 | Msa0671200:intron | 25.0% |
! | GCAGATATGGTTAAAAATAA+GGG | + | chr4_4:14184265-14184284 | Msa0671200:intron | 25.0% |
!! | TAAAGAACCTGATATTGATT+CGG | + | chr4_4:14184369-14184388 | Msa0671200:CDS | 25.0% |
!!! | GTCTGCTCATTTTTAAATTT+TGG | + | chr4_4:14184725-14184744 | Msa0671200:intron | 25.0% |
!!! | TTTAAATTTTGGAGAAGAGT+TGG | + | chr4_4:14184736-14184755 | Msa0671200:intron | 25.0% |
! | AAACTTCACTAACCAATAAA+AGG | + | chr4_4:14184767-14184786 | Msa0671200:intron | 25.0% |
!! | TGTGTATTTCATCCTTTTAT+TGG | - | chr4_4:14184782-14184801 | None:intergenic | 25.0% |
! | AATACACACATATATATGCA+AGG | + | chr4_4:14184794-14184813 | Msa0671200:intron | 25.0% |
!! | AGAGTTGGTTAAAAAAATAC+TGG | + | chr4_4:14184836-14184855 | Msa0671200:intron | 25.0% |
! | GAATCTTGATTACATAGAAT+AGG | + | chr4_4:14184954-14184973 | Msa0671200:intron | 25.0% |
! | TATTTAACCTGTTTATCTCT+AGG | + | chr4_4:14185188-14185207 | Msa0671200:intron | 25.0% |
!! | TTTCAAGGCATTTATCTAAA+GGG | - | chr4_4:14185270-14185289 | None:intergenic | 25.0% |
! | GTGTAATTTATATGCATAGA+AGG | - | chr4_4:14185417-14185436 | None:intergenic | 25.0% |
! | AGTGTTAATCATTGGAATAT+GGG | + | chr4_4:14185460-14185479 | Msa0671200:intron | 25.0% |
!! | GTTTTCTCATTTCTCATATT+AGG | + | chr4_4:14186123-14186142 | Msa0671200:intron | 25.0% |
!!! | TTCTACTTTTATGATGACAT+TGG | + | chr4_4:14186188-14186207 | Msa0671200:intron | 25.0% |
!!! | ATATTTTTTTCACAATGCCA+TGG | + | chr4_4:14186314-14186333 | Msa0671200:CDS | 25.0% |
! | AAGACTTAAGGAAAATATGA+AGG | - | chr4_4:14186377-14186396 | None:intergenic | 25.0% |
! | GTCAGTTCATTAATTAAATC+TGG | + | chr4_4:14186556-14186575 | Msa0671200:intron | 25.0% |
!!! | TGAACATCACTATTTTTAAG+TGG | + | chr4_4:14186954-14186973 | Msa0671200:intron | 25.0% |
!!! | TTGGAAAGTACCATATATTT+AGG | + | chr4_4:14187023-14187042 | Msa0671200:intron | 25.0% |
! | AAGATGAAACTAAGATACAA+AGG | - | chr4_4:14187088-14187107 | None:intergenic | 25.0% |
! | TAAGTTGTAAACACTAATGA+GGG | - | chr4_4:14187133-14187152 | None:intergenic | 25.0% |
! | ATAAGTTGTAAACACTAATG+AGG | - | chr4_4:14187134-14187153 | None:intergenic | 25.0% |
!! | GAAGCATAGACAAATTTTAA+TGG | - | chr4_4:14187371-14187390 | None:intergenic | 25.0% |
!!! | ATCTCATATCTTTTGAGATA+AGG | - | chr4_4:14187499-14187518 | None:intergenic | 25.0% |
!! | ACCTATTCTATCTAGAATTT+GGG | + | chr4_4:14187577-14187596 | Msa0671200:intron | 25.0% |
!!! | CATTTTTTTTGCTACTGTTT+TGG | + | chr4_4:14187674-14187693 | Msa0671200:intron | 25.0% |
! | AACCACTAATGAGTTTATAT+AGG | - | chr4_4:14187792-14187811 | None:intergenic | 25.0% |
! | TTCATAATCACTAATCTATG+AGG | + | chr4_4:14187856-14187875 | Msa0671200:intron | 25.0% |
! | ATTAACACATAGAAATCATG+TGG | - | chr4_4:14188275-14188294 | None:intergenic | 25.0% |
! | TATGTGTTAATGATAGATGT+AGG | + | chr4_4:14188284-14188303 | Msa0671200:intron | 25.0% |
!!! | TATACACATTTTGGTATAGT+AGG | + | chr4_4:14188600-14188619 | Msa0671200:intron | 25.0% |
! | CATTAAAAATGTCCAACTTT+GGG | - | chr4_4:14188725-14188744 | None:intergenic | 25.0% |
! | ACATTAAAAATGTCCAACTT+TGG | - | chr4_4:14188726-14188745 | None:intergenic | 25.0% |
! | ATAAAGAAGTTAAGATTCTG+TGG | + | chr4_4:14188912-14188931 | Msa0671200:intron | 25.0% |
! | TATAAATGGATATTGTTGGT+CGG | - | chr4_4:14189255-14189274 | None:intergenic | 25.0% |
! | AACAACAACTTATGAAGAAA+TGG | - | chr4_4:14189312-14189331 | None:intergenic | 25.0% |
! | CGAAATATGATAGAACATTA+TGG | + | chr4_4:14189437-14189456 | Msa0671200:intron | 25.0% |
! | TTGTAAAAATAGCCAATCAT+GGG | - | chr4_4:14189891-14189910 | None:intergenic | 25.0% |
! | ATTGTAAAAATAGCCAATCA+TGG | - | chr4_4:14189892-14189911 | None:intergenic | 25.0% |
!! | ATTTTTACAATGTAAAGCAG+TGG | + | chr4_4:14189901-14189920 | Msa0671200:CDS | 25.0% |
! | TATTTACTAGGGATTCAAAA+AGG | - | chr4_4:14190162-14190181 | None:intergenic | 25.0% |
! | CAAACGATATCATATTTACT+AGG | - | chr4_4:14190174-14190193 | None:intergenic | 25.0% |
! | CTAGTAAATATGATATCGTT+TGG | + | chr4_4:14190172-14190191 | Msa0671200:intron | 25.0% |
!!! | CATAAGCTTGTTGTATATAA+GGG | - | chr4_4:14190539-14190558 | None:intergenic | 25.0% |
!!! | TCATAAGCTTGTTGTATATA+AGG | - | chr4_4:14190540-14190559 | None:intergenic | 25.0% |
!! | GCTTACACATATATTTGTTT+TGG | - | chr4_4:14190612-14190631 | None:intergenic | 25.0% |
! | AAGCTATACATCTATTCTAT+CGG | + | chr4_4:14190628-14190647 | Msa0671200:intron | 25.0% |
!!! | TCTCAATTGGAGTATTTTTA+GGG | - | chr4_4:14190807-14190826 | None:intergenic | 25.0% |
!! | TTTGGTTTATATTTGTTGGA+TGG | + | chr4_4:14191059-14191078 | Msa0671200:intron | 25.0% |
!! | TTGGTTTATATTTGTTGGAT+GGG | + | chr4_4:14191060-14191079 | Msa0671200:intron | 25.0% |
! | ATATTTGAGAAACAACTAGA+TGG | - | chr4_4:14191363-14191382 | None:intergenic | 25.0% |
!! | TCAAATATAGCTAGATGTTT+TGG | + | chr4_4:14191375-14191394 | Msa0671200:CDS | 25.0% |
!! | AAAGTGTTGGAATAGTTTGT+GGG | - | chr4_4:14180305-14180324 | None:intergenic | 30.0% |
!! | AAAAGTGTTGGAATAGTTTG+TGG | - | chr4_4:14180306-14180325 | None:intergenic | 30.0% |
AAGATGAACTTGAAGAAGAA+CGG | - | chr4_4:14180458-14180477 | None:intergenic | 30.0% | |
TCTGTTTCCAATGCTATTAA+CGG | + | chr4_4:14180564-14180583 | Msa0671200:CDS | 30.0% | |
GAAAGTAGTTCTTCAAAATC+AGG | + | chr4_4:14180588-14180607 | Msa0671200:CDS | 30.0% | |
AGCAAATGTATCATGTATTG+CGG | + | chr4_4:14181102-14181121 | Msa0671200:intron | 30.0% | |
!! | AAAGTAGTTTTACATTAGGC+GGG | + | chr4_4:14181270-14181289 | Msa0671200:intron | 30.0% |
GTGATTACATAAGTCAATAC+AGG | + | chr4_4:14181335-14181354 | Msa0671200:intron | 30.0% | |
!!! | GACTACCGTTTTTTTTACAA+TGG | - | chr4_4:14181401-14181420 | None:intergenic | 30.0% |
ATTAAGGTGAAGTGAATTCT+TGG | + | chr4_4:14181441-14181460 | Msa0671200:intron | 30.0% | |
ATTCGGTACTTCTCTAATAA+AGG | - | chr4_4:14181821-14181840 | None:intergenic | 30.0% | |
AGAAGAAATGTCAAGATCAT+AGG | - | chr4_4:14181866-14181885 | None:intergenic | 30.0% | |
ATTAAAATTCAGAGGGAACA+TGG | - | chr4_4:14182084-14182103 | None:intergenic | 30.0% | |
!! | TTTGTTTTCTGCCTGTATTT+AGG | + | chr4_4:14182192-14182211 | Msa0671200:intron | 30.0% |
! | TGACTCTATTTTATCTCCAT+GGG | - | chr4_4:14182268-14182287 | None:intergenic | 30.0% |
! | TTGACTCTATTTTATCTCCA+TGG | - | chr4_4:14182269-14182288 | None:intergenic | 30.0% |
AAGTCCAAGTAAGTTTAAGT+TGG | + | chr4_4:14182287-14182306 | Msa0671200:CDS | 30.0% | |
CTTTCCAACTTAAACTTACT+TGG | - | chr4_4:14182294-14182313 | None:intergenic | 30.0% | |
!! | CAAGTAAGTTTAAGTTGGAA+AGG | + | chr4_4:14182292-14182311 | Msa0671200:CDS | 30.0% |
AAACATAAGGGGAAAACAAA+AGG | - | chr4_4:14182430-14182449 | None:intergenic | 30.0% | |
ACATGTTTCCACAAACATAA+GGG | - | chr4_4:14182442-14182461 | None:intergenic | 30.0% | |
TTTGTGGAAACATGTCTATA+TGG | + | chr4_4:14182447-14182466 | Msa0671200:intron | 30.0% | |
AAATTCTCGTTATGTTTGGA+TGG | + | chr4_4:14182550-14182569 | Msa0671200:intron | 30.0% | |
ATGGTGATAAAACTTTGAGT+GGG | - | chr4_4:14182696-14182715 | None:intergenic | 30.0% | |
TATGGTGATAAAACTTTGAG+TGG | - | chr4_4:14182697-14182716 | None:intergenic | 30.0% | |
! | AACAATAAAGATGGTGATGA+TGG | - | chr4_4:14182784-14182803 | None:intergenic | 30.0% |
AATGTGATGTATGGTCTTTA+TGG | + | chr4_4:14183137-14183156 | Msa0671200:intron | 30.0% | |
TTCCAACTATTGGACTAATT+GGG | - | chr4_4:14183328-14183347 | None:intergenic | 30.0% | |
ATTCCAACTATTGGACTAAT+TGG | - | chr4_4:14183329-14183348 | None:intergenic | 30.0% | |
GAATGCAAAATTCCAACTAT+TGG | - | chr4_4:14183338-14183357 | None:intergenic | 30.0% | |
!!! | TGCTGTATTTTAAGTTAGCT+TGG | + | chr4_4:14183550-14183569 | Msa0671200:intron | 30.0% |
TTCTTCTTCTAGTGTTTGAT+TGG | + | chr4_4:14183878-14183897 | Msa0671200:intron | 30.0% | |
!! | TCTCCAATGTGTTTTTGTTT+GGG | + | chr4_4:14183943-14183962 | Msa0671200:intron | 30.0% |
TTTCCCAAACAAAAACACAT+TGG | - | chr4_4:14183949-14183968 | None:intergenic | 30.0% | |
!! | TGTGTTTTTGTTTGGGAAAA+TGG | + | chr4_4:14183950-14183969 | Msa0671200:intron | 30.0% |
!! | TTTTTGTTTGGGAAAATGGT+AGG | + | chr4_4:14183954-14183973 | Msa0671200:intron | 30.0% |
! | TTTGCAAGCACAAATTTTTG+TGG | + | chr4_4:14183986-14184005 | Msa0671200:intron | 30.0% |
GTTAGAAATATTAACTCCAG+TGG | + | chr4_4:14184008-14184027 | Msa0671200:intron | 30.0% | |
! | TTCATTTGATTTCTCTGAAC+AGG | - | chr4_4:14184319-14184338 | None:intergenic | 30.0% |
!! | AAAGAACCTGATATTGATTC+GGG | + | chr4_4:14184370-14184389 | Msa0671200:CDS | 30.0% |
! | ATGATTGCATCTGCTTTAAA+GGG | - | chr4_4:14184400-14184419 | None:intergenic | 30.0% |
! | AAGAAAGTATACCATATGCT+GGG | - | chr4_4:14184432-14184451 | None:intergenic | 30.0% |
ATGAAATATTTAGGCAGAGT+TGG | + | chr4_4:14184821-14184840 | Msa0671200:intron | 30.0% | |
TCTACCCAAACATATCTTAT+GGG | + | chr4_4:14185147-14185166 | Msa0671200:intron | 30.0% | |
GATTCCCATAAGATATGTTT+GGG | - | chr4_4:14185154-14185173 | None:intergenic | 30.0% | |
AGATTCCCATAAGATATGTT+TGG | - | chr4_4:14185155-14185174 | None:intergenic | 30.0% | |
ACATATCTTATGGGAATCTA+TGG | + | chr4_4:14185156-14185175 | Msa0671200:intron | 30.0% | |
! | TTCAAGGCATTTATCTAAAG+GGG | - | chr4_4:14185269-14185288 | None:intergenic | 30.0% |
! | GTTTCAAGGCATTTATCTAA+AGG | - | chr4_4:14185271-14185290 | None:intergenic | 30.0% |
ACATCTATTCAAGTGTTTCA+AGG | - | chr4_4:14185285-14185304 | None:intergenic | 30.0% | |
AGTAGACAAATTGATATGCT+CGG | + | chr4_4:14185317-14185336 | Msa0671200:intron | 30.0% | |
AGAACAAACTCTTGAGTTAT+TGG | - | chr4_4:14185373-14185392 | None:intergenic | 30.0% | |
TGCATATAAATTACACCCTA+AGG | + | chr4_4:14185421-14185440 | Msa0671200:intron | 30.0% | |
CATTATGCAGTGTTAATCAT+TGG | + | chr4_4:14185452-14185471 | Msa0671200:intron | 30.0% | |
CAGTGTTAATCATTGGAATA+TGG | + | chr4_4:14185459-14185478 | Msa0671200:intron | 30.0% | |
AGCAAAACTGAAATTGCATA+TGG | - | chr4_4:14185519-14185538 | None:intergenic | 30.0% | |
ACTTGCATAAGGACTAATTT+AGG | + | chr4_4:14185542-14185561 | Msa0671200:intron | 30.0% | |
TAGGGTAAATTTATGGTATC+TGG | - | chr4_4:14185704-14185723 | None:intergenic | 30.0% | |
TGGATGATAGGGTAAATTTA+TGG | - | chr4_4:14185711-14185730 | None:intergenic | 30.0% | |
AGTACATAAGTCTTTACAGT+GGG | + | chr4_4:14185730-14185749 | Msa0671200:intron | 30.0% | |
! | GCAGGCTAAATATTTGAAAT+AGG | + | chr4_4:14185770-14185789 | Msa0671200:intron | 30.0% |
! | GCTTTATTACCATATAGAGT+TGG | + | chr4_4:14185914-14185933 | Msa0671200:intron | 30.0% |
ATTACCATATAGAGTTGGAT+AGG | + | chr4_4:14185919-14185938 | Msa0671200:intron | 30.0% | |
CTAACTAATCTGCTAGAATT+CGG | + | chr4_4:14185947-14185966 | Msa0671200:intron | 30.0% | |
TAACTAATCTGCTAGAATTC+GGG | + | chr4_4:14185948-14185967 | Msa0671200:intron | 30.0% | |
CAATAAACTTCAATCACAAG+GGG | - | chr4_4:14186453-14186472 | None:intergenic | 30.0% | |
GCAATAAACTTCAATCACAA+GGG | - | chr4_4:14186454-14186473 | None:intergenic | 30.0% | |
TGCAATAAACTTCAATCACA+AGG | - | chr4_4:14186455-14186474 | None:intergenic | 30.0% | |
!! | GTATTTTATCTTTTTCACCC+AGG | + | chr4_4:14186476-14186495 | Msa0671200:intron | 30.0% |
TATGGTTGCAAAAAATTAGC+TGG | - | chr4_4:14186592-14186611 | None:intergenic | 30.0% | |
!! | AAATAGTCGACTCGTTAATT+TGG | + | chr4_4:14186656-14186675 | Msa0671200:CDS | 30.0% |
GAGACATGATTAATGATCTT+CGG | + | chr4_4:14186689-14186708 | Msa0671200:CDS | 30.0% | |
ACATTCCTCATGCATATATA+TGG | + | chr4_4:14186773-14186792 | Msa0671200:CDS | 30.0% | |
AAAACCAGATTATAAGGTGA+AGG | - | chr4_4:14187170-14187189 | None:intergenic | 30.0% | |
CTCAACAAAACCAGATTATA+AGG | - | chr4_4:14187176-14187195 | None:intergenic | 30.0% | |
AATCTTAATAGAGTTTGGGT+TGG | + | chr4_4:14187406-14187425 | Msa0671200:intron | 30.0% | |
! | ATCTTAATAGAGTTTGGGTT+GGG | + | chr4_4:14187407-14187426 | Msa0671200:intron | 30.0% |
TGAACATAAGTTTACAAGTG+GGG | - | chr4_4:14187474-14187493 | None:intergenic | 30.0% | |
CTGAACATAAGTTTACAAGT+GGG | - | chr4_4:14187475-14187494 | None:intergenic | 30.0% | |
TCTGAACATAAGTTTACAAG+TGG | - | chr4_4:14187476-14187495 | None:intergenic | 30.0% | |
! | GACCTATTCTATCTAGAATT+TGG | + | chr4_4:14187576-14187595 | Msa0671200:intron | 30.0% |
ACCCAAATTCTAGATAGAAT+AGG | - | chr4_4:14187581-14187600 | None:intergenic | 30.0% | |
CAGTAGCAAAAAAAATGTTC+TGG | - | chr4_4:14187671-14187690 | None:intergenic | 30.0% | |
AGCCTATATAAACTCATTAG+TGG | + | chr4_4:14187787-14187806 | Msa0671200:intron | 30.0% | |
ATAATGCATATACTTCAGCT+TGG | + | chr4_4:14187917-14187936 | Msa0671200:intron | 30.0% | |
TAATGCATATACTTCAGCTT+GGG | + | chr4_4:14187918-14187937 | Msa0671200:intron | 30.0% | |
GACCAAAAATTGATGTAGTA+GGG | + | chr4_4:14188111-14188130 | Msa0671200:CDS | 30.0% | |
! | AACCCTACTACATCAATTTT+TGG | - | chr4_4:14188116-14188135 | None:intergenic | 30.0% |
TGATGATTACTTATTCCGAA+GGG | - | chr4_4:14188440-14188459 | None:intergenic | 30.0% | |
ATGATGATTACTTATTCCGA+AGG | - | chr4_4:14188441-14188460 | None:intergenic | 30.0% | |
TTCGGAATAAGTAATCATCA+TGG | + | chr4_4:14188440-14188459 | Msa0671200:intron | 30.0% | |
! | AAGTAATCATCATGGCTTTT+TGG | + | chr4_4:14188448-14188467 | Msa0671200:intron | 30.0% |
! | AACCAAAAATGACGGAAAAA+GGG | - | chr4_4:14188546-14188565 | None:intergenic | 30.0% |
! | TAACCAAAAATGACGGAAAA+AGG | - | chr4_4:14188547-14188566 | None:intergenic | 30.0% |
GGTGTATTACAGATTAAGAA+TGG | - | chr4_4:14188794-14188813 | None:intergenic | 30.0% | |
TTATTTACAGAAAAGTCTCC+AGG | - | chr4_4:14188896-14188915 | None:intergenic | 30.0% | |
! | AATTTTGTGGTCCTTTTTGT+TGG | + | chr4_4:14188952-14188971 | Msa0671200:intron | 30.0% |
!!! | TTGTTTTAGAGGGGTTATTA+CGG | + | chr4_4:14189004-14189023 | Msa0671200:intron | 30.0% |
AACTTATGAAGAAATGGTCA+TGG | - | chr4_4:14189306-14189325 | None:intergenic | 30.0% | |
!! | AGTTTTTGATTGTCAGTTTC+TGG | + | chr4_4:14189353-14189372 | Msa0671200:intron | 30.0% |
AACTACAATAACGATAACCA+AGG | - | chr4_4:14189504-14189523 | None:intergenic | 30.0% | |
! | TTATTGTAGTTTTCTTGTCG+AGG | + | chr4_4:14189513-14189532 | Msa0671200:intron | 30.0% |
AGTATATATAAAGAGAGGGA+GGG | - | chr4_4:14189629-14189648 | None:intergenic | 30.0% | |
AAGTATATATAAAGAGAGGG+AGG | - | chr4_4:14189630-14189649 | None:intergenic | 30.0% | |
!!! | ATCTTTTTTGGATCTTGAAC+AGG | - | chr4_4:14189671-14189690 | None:intergenic | 30.0% |
! | ACAAATAATTGTAGAAGCAC+TGG | + | chr4_4:14189694-14189713 | Msa0671200:CDS | 30.0% |
AACAAGTATATAGAGTCCTT+TGG | - | chr4_4:14189857-14189876 | None:intergenic | 30.0% | |
AAAGGACTCTATATACTTGT+TGG | + | chr4_4:14189856-14189875 | Msa0671200:CDS | 30.0% | |
TGTAAAAATAGCCAATCATG+GGG | - | chr4_4:14189890-14189909 | None:intergenic | 30.0% | |
! | ATCATCTAGTTCAATACTCT+TGG | + | chr4_4:14189928-14189947 | Msa0671200:intron | 30.0% |
ATCACCAAAAAAAGGAACTA+TGG | - | chr4_4:14190242-14190261 | None:intergenic | 30.0% | |
TTTATGGCATCAATCAACTT+AGG | - | chr4_4:14190340-14190359 | None:intergenic | 30.0% | |
GGGATCTAGCATAAAATTTA+TGG | - | chr4_4:14190356-14190375 | None:intergenic | 30.0% | |
! | AAATTTTATGCTAGATCCCA+AGG | + | chr4_4:14190357-14190376 | Msa0671200:CDS | 30.0% |
TGAGATGAAATTCAGTAGTT+CGG | - | chr4_4:14190573-14190592 | None:intergenic | 30.0% | |
CAAAGACTTCTGACAAATTT+GGG | + | chr4_4:14190752-14190771 | Msa0671200:intron | 30.0% | |
TGACAAATTTGGGTAAAACA+AGG | + | chr4_4:14190762-14190781 | Msa0671200:intron | 30.0% | |
!! | CTCTCAATTGGAGTATTTTT+AGG | - | chr4_4:14190808-14190827 | None:intergenic | 30.0% |
AAAAATACTCCAATTGAGAG+TGG | + | chr4_4:14190808-14190827 | Msa0671200:intron | 30.0% | |
AGAAATGTAAAGTGACAACA+GGG | - | chr4_4:14190903-14190922 | None:intergenic | 30.0% | |
TAGAAATGTAAAGTGACAAC+AGG | - | chr4_4:14190904-14190923 | None:intergenic | 30.0% | |
! | TTGCAGTAGATTTTCTACAA+AGG | + | chr4_4:14190926-14190945 | Msa0671200:intron | 30.0% |
!! | GGTTTTATATTTACATTGCG+TGG | + | chr4_4:14191099-14191118 | Msa0671200:intron | 30.0% |
TAACTGCTCATTATACTTCT+AGG | + | chr4_4:14191215-14191234 | Msa0671200:intron | 30.0% | |
CTCATTATACTTCTAGGTAA+AGG | + | chr4_4:14191221-14191240 | Msa0671200:intron | 30.0% | |
!! | AAAGAACAAAAGCATTACAC+AGG | - | chr4_4:14191576-14191595 | None:intergenic | 30.0% |
TAATTAAGTGTATGCCAAGT+TGG | + | chr4_4:14191672-14191691 | Msa0671200:three_prime_UTR | 30.0% | |
ATACCTAAACTAAACCAACT+TGG | - | chr4_4:14191689-14191708 | None:intergenic | 30.0% | |
TGCTAATATTCTATGTGGTG+CGG | - | chr4_4:14180272-14180291 | None:intergenic | 35.0% | |
!! | GAAGGTGCTAATATTCTATG+TGG | - | chr4_4:14180277-14180296 | None:intergenic | 35.0% |
!! | AAGTGTTGGAATAGTTTGTG+GGG | - | chr4_4:14180304-14180323 | None:intergenic | 35.0% |
AAATTCGTTGCACGGTTATA+GGG | - | chr4_4:14180362-14180381 | None:intergenic | 35.0% | |
TAAATTCGTTGCACGGTTAT+AGG | - | chr4_4:14180363-14180382 | None:intergenic | 35.0% | |
TATAACCGTGCAACGAATTT+AGG | + | chr4_4:14180362-14180381 | Msa0671200:five_prime_UTR | 35.0% | |
AGTATTATCCACAACTTCCT+TGG | - | chr4_4:14180541-14180560 | None:intergenic | 35.0% | |
ACTTTCACCGTTAATAGCAT+TGG | - | chr4_4:14180574-14180593 | None:intergenic | 35.0% | |
GCAAATGTATCATGTATTGC+GGG | + | chr4_4:14181103-14181122 | Msa0671200:intron | 35.0% | |
! | AACGGTAGTCTTTTATTAGG+TGG | + | chr4_4:14181411-14181430 | Msa0671200:intron | 35.0% |
ATTTCTTCTGCAACATAAGC+TGG | + | chr4_4:14181877-14181896 | Msa0671200:intron | 35.0% | |
CAAAATTCCTGTACAGGAAA+AGG | + | chr4_4:14182374-14182393 | Msa0671200:CDS | 35.0% | |
! | TTGTTTTCCCCTTATGTTTG+TGG | + | chr4_4:14182431-14182450 | Msa0671200:intron | 35.0% |
CATGTTTCCACAAACATAAG+GGG | - | chr4_4:14182441-14182460 | None:intergenic | 35.0% | |
GACATGTTTCCACAAACATA+AGG | - | chr4_4:14182443-14182462 | None:intergenic | 35.0% | |
TGGTCGGTAGAAACAAAAAA+AGG | - | chr4_4:14182764-14182783 | None:intergenic | 35.0% | |
!! | ATAAAGATGGTGATGATGGT+CGG | - | chr4_4:14182780-14182799 | None:intergenic | 35.0% |
GCATCACTATATTCAATGGA+GGG | - | chr4_4:14182980-14182999 | None:intergenic | 35.0% | |
AGCATCACTATATTCAATGG+AGG | - | chr4_4:14182981-14183000 | None:intergenic | 35.0% | |
AACGCTTACAGGTATAGTAA+TGG | + | chr4_4:14183048-14183067 | Msa0671200:intron | 35.0% | |
GAAGGACGAAAAGAGATATT+TGG | - | chr4_4:14183090-14183109 | None:intergenic | 35.0% | |
ATCCCAATTAGTCCAATAGT+TGG | + | chr4_4:14183323-14183342 | Msa0671200:intron | 35.0% | |
CGCTTGACATAATAACTTTG+AGG | + | chr4_4:14183409-14183428 | Msa0671200:intron | 35.0% | |
TAGAAGAAGAAACTGCAGTT+GGG | - | chr4_4:14183869-14183888 | None:intergenic | 35.0% | |
!! | CTCTCCAATGTGTTTTTGTT+TGG | + | chr4_4:14183942-14183961 | Msa0671200:intron | 35.0% |
CTTAAAAATGTGCTGTGTCA+TGG | + | chr4_4:14184119-14184138 | Msa0671200:intron | 35.0% | |
AAATAAGGGCTTTCTTCCAT+CGG | + | chr4_4:14184279-14184298 | Msa0671200:CDS | 35.0% | |
ATATCAGGTTCTTTACATGC+AGG | - | chr4_4:14184364-14184383 | None:intergenic | 35.0% | |
!! | TGATTGCATCTGCTTTAAAG+GGG | - | chr4_4:14184399-14184418 | None:intergenic | 35.0% |
CATGATTGCATCTGCTTTAA+AGG | - | chr4_4:14184401-14184420 | None:intergenic | 35.0% | |
!! | CTTTAAAGCAGATGCAATCA+TGG | + | chr4_4:14184399-14184418 | Msa0671200:CDS | 35.0% |
! | AGAAAGTATACCATATGCTG+GGG | - | chr4_4:14184431-14184450 | None:intergenic | 35.0% |
! | CAAGAAAGTATACCATATGC+TGG | - | chr4_4:14184433-14184452 | None:intergenic | 35.0% |
CACACATATATATGCAAGGA+CGG | + | chr4_4:14184798-14184817 | Msa0671200:intron | 35.0% | |
CAAGGACGGATGAAATATTT+AGG | + | chr4_4:14184812-14184831 | Msa0671200:intron | 35.0% | |
! | GTTTTTATCGCTTACGGTAT+AGG | - | chr4_4:14185066-14185085 | None:intergenic | 35.0% |
CTCTACCCAAACATATCTTA+TGG | + | chr4_4:14185146-14185165 | Msa0671200:intron | 35.0% | |
GAGATTTCCTAGAGATAAAC+AGG | - | chr4_4:14185198-14185217 | None:intergenic | 35.0% | |
AAATTACACCCTAAGGAGTA+AGG | + | chr4_4:14185428-14185447 | Msa0671200:intron | 35.0% | |
CATAATGTCCTTACTCCTTA+GGG | - | chr4_4:14185439-14185458 | None:intergenic | 35.0% | |
!!! | GTTTTGCTGTTACTTGCATA+AGG | + | chr4_4:14185531-14185550 | Msa0671200:intron | 35.0% |
AGGACAATCTATCATGTGAT+CGG | + | chr4_4:14185562-14185581 | Msa0671200:intron | 35.0% | |
TCAGTTTGGTACTAAGAAGA+AGG | + | chr4_4:14185620-14185639 | Msa0671200:intron | 35.0% | |
CAGTTTGGTACTAAGAAGAA+GGG | + | chr4_4:14185621-14185640 | Msa0671200:intron | 35.0% | |
GACTTATGTACTGGATGATA+GGG | - | chr4_4:14185722-14185741 | None:intergenic | 35.0% | |
AGACTTATGTACTGGATGAT+AGG | - | chr4_4:14185723-14185742 | None:intergenic | 35.0% | |
CACTGTAAAGACTTATGTAC+TGG | - | chr4_4:14185731-14185750 | None:intergenic | 35.0% | |
CAGTACATAAGTCTTTACAG+TGG | + | chr4_4:14185729-14185748 | Msa0671200:intron | 35.0% | |
GATTGTAAATGATGAGTTGC+AGG | + | chr4_4:14185752-14185771 | Msa0671200:intron | 35.0% | |
CTTTCCTATCCAACTCTATA+TGG | - | chr4_4:14185926-14185945 | None:intergenic | 35.0% | |
ATCTCTTTCACATTTCTTGC+TGG | + | chr4_4:14186152-14186171 | Msa0671200:intron | 35.0% | |
AGTGTCAGTAGCAAAAACAA+TGG | - | chr4_4:14186237-14186256 | None:intergenic | 35.0% | |
TAAAGCAACAAGCTGGTTAT+AGG | + | chr4_4:14186533-14186552 | Msa0671200:CDS | 35.0% | |
AAAGCAACAAGCTGGTTATA+GGG | + | chr4_4:14186534-14186553 | Msa0671200:CDS | 35.0% | |
ACATATTTAAGTGGCTCACA+AGG | + | chr4_4:14186739-14186758 | Msa0671200:CDS | 35.0% | |
! | TTTGGTTTAGGAACAAGATG+AGG | - | chr4_4:14186802-14186821 | None:intergenic | 35.0% |
CATCTTGTTCCTAAACCAAA+AGG | + | chr4_4:14186802-14186821 | Msa0671200:CDS | 35.0% | |
!!! | AAGTAACCACCTTTTGGTTT+AGG | - | chr4_4:14186814-14186833 | None:intergenic | 35.0% |
ACAACCTTCACCTTATAATC+TGG | + | chr4_4:14187163-14187182 | Msa0671200:intron | 35.0% | |
! | AGTCTATCCTCGATTTGTAT+TGG | + | chr4_4:14187229-14187248 | Msa0671200:intron | 35.0% |
! | GTCTATCCTCGATTTGTATT+GGG | + | chr4_4:14187230-14187249 | Msa0671200:intron | 35.0% |
TCTTAAGCATGGAGAAATGT+GGG | - | chr4_4:14187303-14187322 | None:intergenic | 35.0% | |
! | TCCTACAAAACTAGCTTGTA+AGG | + | chr4_4:14187439-14187458 | Msa0671200:intron | 35.0% |
!!! | ACCTTACAAGCTAGTTTTGT+AGG | - | chr4_4:14187443-14187462 | None:intergenic | 35.0% |
ATGAGATTTAACTCACGTCT+AGG | + | chr4_4:14187512-14187531 | Msa0671200:intron | 35.0% | |
AGCCCATTAGTTCATTAATC+AGG | + | chr4_4:14187748-14187767 | Msa0671200:intron | 35.0% | |
GGCCTGATTAATGAACTAAT+GGG | - | chr4_4:14187753-14187772 | None:intergenic | 35.0% | |
ATAGGCTATTCTGACCTAAT+GGG | - | chr4_4:14187774-14187793 | None:intergenic | 35.0% | |
TATAGGCTATTCTGACCTAA+TGG | - | chr4_4:14187775-14187794 | None:intergenic | 35.0% | |
TAAACTCATTAGTGGTTGAC+TGG | + | chr4_4:14187795-14187814 | Msa0671200:intron | 35.0% | |
AATGCATATACTTCAGCTTG+GGG | + | chr4_4:14187919-14187938 | Msa0671200:intron | 35.0% | |
GGACCAAAAATTGATGTAGT+AGG | + | chr4_4:14188110-14188129 | Msa0671200:CDS | 35.0% | |
!! | AAGCCATTTTACAAGAGACT+CGG | - | chr4_4:14188174-14188193 | None:intergenic | 35.0% |
CTTGTAAAATGGCTTGAAGA+TGG | + | chr4_4:14188179-14188198 | Msa0671200:CDS | 35.0% | |
CTACCAAACCCAATGTAAAT+CGG | - | chr4_4:14188212-14188231 | None:intergenic | 35.0% | |
TGCAAATAAATACACTCACC+AGG | - | chr4_4:14188235-14188254 | None:intergenic | 35.0% | |
TGTAGTCAATAGCATGCTAT+AGG | + | chr4_4:14188322-14188341 | Msa0671200:intron | 35.0% | |
! | TAGCATGCTATAGGCTTTAT+CGG | + | chr4_4:14188331-14188350 | Msa0671200:intron | 35.0% |
TAGACAATAGTAGAGTGGTT+TGG | + | chr4_4:14188371-14188390 | Msa0671200:intron | 35.0% | |
!! | AATCATCATGGCTTTTTGGT+TGG | + | chr4_4:14188452-14188471 | Msa0671200:intron | 35.0% |
!!! | ATCATCATGGCTTTTTGGTT+GGG | + | chr4_4:14188453-14188472 | Msa0671200:intron | 35.0% |
!!! | CTTTTTGGTTGGGGTATTTT+AGG | + | chr4_4:14188463-14188482 | Msa0671200:intron | 35.0% |
AAAAACACCAAAGCAGTTCT+AGG | + | chr4_4:14188499-14188518 | Msa0671200:intron | 35.0% | |
AAAACACCAAAGCAGTTCTA+GGG | + | chr4_4:14188500-14188519 | Msa0671200:intron | 35.0% | |
AGTGTTATCAATCCCCAATA+GGG | - | chr4_4:14188671-14188690 | None:intergenic | 35.0% | |
GCAAGCTAACAATGAAAAGT+AGG | - | chr4_4:14188815-14188834 | None:intergenic | 35.0% | |
CAAGTCTGTTAGTTGTTGAT+GGG | + | chr4_4:14188847-14188866 | Msa0671200:intron | 35.0% | |
!! | TAGTTGTTGATGGGCTATAT+CGG | + | chr4_4:14188856-14188875 | Msa0671200:intron | 35.0% |
! | AGGAGAATGCTTGGATTTTT+CGG | + | chr4_4:14188975-14188994 | Msa0671200:intron | 35.0% |
!!! | TTCGGATTGAGTTGTTTTAG+AGG | + | chr4_4:14188993-14189012 | Msa0671200:intron | 35.0% |
!!! | TCGGATTGAGTTGTTTTAGA+GGG | + | chr4_4:14188994-14189013 | Msa0671200:intron | 35.0% |
!!! | TGTTTTAGAGGGGTTATTAC+GGG | + | chr4_4:14189005-14189024 | Msa0671200:intron | 35.0% |
TAAAGATCCTCACATCTCTT+TGG | + | chr4_4:14189034-14189053 | Msa0671200:intron | 35.0% | |
! | AGTTTTCTTGTCGTAACTCT+CGG | + | chr4_4:14189104-14189123 | Msa0671200:intron | 35.0% |
! | ACCGACACTTTTATATGGTA+CGG | + | chr4_4:14189138-14189157 | Msa0671200:intron | 35.0% |
! | TCCGTACCATATAAAAGTGT+CGG | - | chr4_4:14189142-14189161 | None:intergenic | 35.0% |
! | TTTTATATGGTACGGAGTGT+TGG | + | chr4_4:14189146-14189165 | Msa0671200:intron | 35.0% |
! | TTTATATGGTACGGAGTGTT+GGG | + | chr4_4:14189147-14189166 | Msa0671200:intron | 35.0% |
AGATATACAAAAGCAAGGAG+AGG | - | chr4_4:14189544-14189563 | None:intergenic | 35.0% | |
GCAAGAGATATACAAAAGCA+AGG | - | chr4_4:14189549-14189568 | None:intergenic | 35.0% | |
TATATATAAAGAGAGGGAGG+GGG | - | chr4_4:14189627-14189646 | None:intergenic | 35.0% | |
GTATATATAAAGAGAGGGAG+GGG | - | chr4_4:14189628-14189647 | None:intergenic | 35.0% | |
AGGCATCATCAATAAAGGAT+GGG | + | chr4_4:14189733-14189752 | Msa0671200:CDS | 35.0% | |
!!! | CATTTTTTGTAGGTGCATCA+TGG | + | chr4_4:14190086-14190105 | Msa0671200:intron | 35.0% |
AAAAAGGAACTATGGTCGTT+GGG | - | chr4_4:14190234-14190253 | None:intergenic | 35.0% | |
AAAAAAGGAACTATGGTCGT+TGG | - | chr4_4:14190235-14190254 | None:intergenic | 35.0% | |
!!! | ACGACCATAGTTCCTTTTTT+TGG | + | chr4_4:14190235-14190254 | Msa0671200:CDS | 35.0% |
! | AAGGGTTGATCACCAAAAAA+AGG | - | chr4_4:14190250-14190269 | None:intergenic | 35.0% |
!! | TTTTTGGTGATCAACCCTTT+TGG | + | chr4_4:14190251-14190270 | Msa0671200:CDS | 35.0% |
!! | TTTTGGTGATCAACCCTTTT+GGG | + | chr4_4:14190252-14190271 | Msa0671200:CDS | 35.0% |
TGTGTATCAGCCAAATGAAA+CGG | + | chr4_4:14190411-14190430 | Msa0671200:intron | 35.0% | |
GCTTCTTTCAGAAGTAGATT+CGG | + | chr4_4:14190438-14190457 | Msa0671200:intron | 35.0% | |
AGATTCGGAGGATAAATTTC+TGG | + | chr4_4:14190453-14190472 | Msa0671200:intron | 35.0% | |
ACATCTATTCTATCGGCATT+AGG | + | chr4_4:14190635-14190654 | Msa0671200:intron | 35.0% | |
TTGTCAGAAGTCTTTGGATT+AGG | - | chr4_4:14190748-14190767 | None:intergenic | 35.0% | |
CCAAATTTGTCAGAAGTCTT+TGG | - | chr4_4:14190754-14190773 | None:intergenic | 35.0% | |
CCAAAGACTTCTGACAAATT+TGG | + | chr4_4:14190751-14190770 | Msa0671200:intron | 35.0% | |
!! | TTTCGATGCTGATTTGTCAT+TGG | - | chr4_4:14190843-14190862 | None:intergenic | 35.0% |
!! | TACAAAGGCAAACTGCTTTT+CGG | + | chr4_4:14190941-14190960 | Msa0671200:intron | 35.0% |
! | ATGGGCTGATGTATTTAGAT+AGG | + | chr4_4:14191078-14191097 | Msa0671200:intron | 35.0% |
! | GGTTTACACCTCAAATTTTG+AGG | - | chr4_4:14191125-14191144 | None:intergenic | 35.0% |
! | GTGTAAACCAATCTCAGTTT+TGG | + | chr4_4:14191136-14191155 | Msa0671200:intron | 35.0% |
AATGCAACCAAAACTGAGAT+TGG | - | chr4_4:14191146-14191165 | None:intergenic | 35.0% | |
!!! | GTTTTGGTTGCATTCTTTCT+TGG | + | chr4_4:14191152-14191171 | Msa0671200:intron | 35.0% |
!! | CATTCTTTCTTGGTTCTGTT+TGG | + | chr4_4:14191162-14191181 | Msa0671200:intron | 35.0% |
AATTGAACTTGCCAAAGCTA+TGG | + | chr4_4:14191251-14191270 | Msa0671200:CDS | 35.0% | |
! | ATCCTCATTTTCCATAGCTT+TGG | - | chr4_4:14191265-14191284 | None:intergenic | 35.0% |
AAAGCTATGGAAAATGAGGA+TGG | + | chr4_4:14191264-14191283 | Msa0671200:CDS | 35.0% | |
AAGCTATGGAAAATGAGGAT+GGG | + | chr4_4:14191265-14191284 | Msa0671200:CDS | 35.0% | |
GTACAGAGATTGAAAAACAG+TGG | - | chr4_4:14191434-14191453 | None:intergenic | 35.0% | |
! | AAAGCATTACACAGGTACAA+GGG | - | chr4_4:14191568-14191587 | None:intergenic | 35.0% |
!! | AAAAGCATTACACAGGTACA+AGG | - | chr4_4:14191569-14191588 | None:intergenic | 35.0% |
!! | ATGCCAAGTTGGTTTAGTTT+AGG | + | chr4_4:14191683-14191702 | Msa0671200:three_prime_UTR | 35.0% |
! | AATAGTTTGTGGGGTGAAGA+AGG | - | chr4_4:14180295-14180314 | None:intergenic | 40.0% |
AATTCGTTGCACGGTTATAG+GGG | - | chr4_4:14180361-14180380 | None:intergenic | 40.0% | |
ATGAACTTGAAGAAGAACGG+CGG | - | chr4_4:14180455-14180474 | None:intergenic | 40.0% | |
ATCTTCTTCAAGCGATCGAT+CGG | + | chr4_4:14180473-14180492 | Msa0671200:CDS | 40.0% | |
AAGGTGAAGTGAATTCTTGG+AGG | + | chr4_4:14181444-14181463 | Msa0671200:intron | 40.0% | |
AATTTGCATGTCCGCCAAAA+TGG | + | chr4_4:14181620-14181639 | Msa0671200:intron | 40.0% | |
! | AATGTCTGCCTTGACCATTT+TGG | - | chr4_4:14181637-14181656 | None:intergenic | 40.0% |
TATTTCTTCACGGAGAAGCA+TGG | - | chr4_4:14181941-14181960 | None:intergenic | 40.0% | |
TGGAAAGGTCAAAAACAGAG+CGG | + | chr4_4:14182307-14182326 | Msa0671200:CDS | 40.0% | |
AAAATTTGTGCTGCATCCTC+AGG | - | chr4_4:14182348-14182367 | None:intergenic | 40.0% | |
! | TAGCATACCTTTTCCTGTAC+AGG | - | chr4_4:14182384-14182403 | None:intergenic | 40.0% |
GTGGAAACATGTCTATATGG+TGG | + | chr4_4:14182450-14182469 | Msa0671200:intron | 40.0% | |
TATGTTTGGATGGAGAGATG+TGG | + | chr4_4:14182560-14182579 | Msa0671200:intron | 40.0% | |
ATAGCTACCGTAAAAGACGA+CGG | + | chr4_4:14182840-14182859 | Msa0671200:CDS | 40.0% | |
! | TACAGTTCCGTCGTCTTTTA+CGG | - | chr4_4:14182850-14182869 | None:intergenic | 40.0% |
GCATCAGGTTCAACATCTAT+GGG | - | chr4_4:14182885-14182904 | None:intergenic | 40.0% | |
AGCATCAGGTTCAACATCTA+TGG | - | chr4_4:14182886-14182905 | None:intergenic | 40.0% | |
TCAATGGAGGGATGTAATCA+AGG | - | chr4_4:14182968-14182987 | None:intergenic | 40.0% | |
ATGCTTATTGTTGGTACACG+AGG | + | chr4_4:14182996-14183015 | Msa0671200:CDS | 40.0% | |
! | CGTTTTCCTATTGCGACAAA+TGG | - | chr4_4:14183032-14183051 | None:intergenic | 40.0% |
GCTTACAGGTATAGTAATGG+TGG | + | chr4_4:14183051-14183070 | Msa0671200:intron | 40.0% | |
GTTCATGGGAATGTGATGTA+TGG | + | chr4_4:14183128-14183147 | Msa0671200:intron | 40.0% | |
GAGTTGCTAATCTAACACGA+TGG | - | chr4_4:14183751-14183770 | None:intergenic | 40.0% | |
!!! | AAGGAGTTTGTTTTGACAGC+TGG | + | chr4_4:14183782-14183801 | Msa0671200:CDS | 40.0% |
!!! | AGGAGTTTGTTTTGACAGCT+GGG | + | chr4_4:14183783-14183802 | Msa0671200:CDS | 40.0% |
!! | GGTTGGAGTTTTATCCGTTA+GGG | + | chr4_4:14183804-14183823 | Msa0671200:CDS | 40.0% |
!! | GTTGGAGTTTTATCCGTTAG+GGG | + | chr4_4:14183805-14183824 | Msa0671200:CDS | 40.0% |
!! | TTGGAGTTTTATCCGTTAGG+GGG | + | chr4_4:14183806-14183825 | Msa0671200:CDS | 40.0% |
! | ATACATCCAGCAAGGACTTT+TGG | - | chr4_4:14183836-14183855 | None:intergenic | 40.0% |
CTAGAAGAAGAAACTGCAGT+TGG | - | chr4_4:14183870-14183889 | None:intergenic | 40.0% | |
TCATTTACGTAGTTGTAGGG+AGG | - | chr4_4:14184184-14184203 | None:intergenic | 40.0% | |
AATAAGGGCTTTCTTCCATC+GGG | + | chr4_4:14184280-14184299 | Msa0671200:CDS | 40.0% | |
! | GAAAGTATACCATATGCTGG+GGG | - | chr4_4:14184430-14184449 | None:intergenic | 40.0% |
GCATAATGTCCTTACTCCTT+AGG | - | chr4_4:14185440-14185459 | None:intergenic | 40.0% | |
ATATGGGACAGAACCAATTC+CGG | + | chr4_4:14185476-14185495 | Msa0671200:intron | 40.0% | |
CATGGAGTGTGAATTCAGTT+TGG | + | chr4_4:14185606-14185625 | Msa0671200:intron | 40.0% | |
! | ATGGCATGATCGTTGTTTCA+AGG | + | chr4_4:14185667-14185686 | Msa0671200:intron | 40.0% |
! | TGATCGTTGTTTCAAGGTTG+TGG | + | chr4_4:14185673-14185692 | Msa0671200:intron | 40.0% |
ACCTCAACAAAAGACGATGA+AGG | + | chr4_4:14185793-14185812 | Msa0671200:intron | 40.0% | |
! | ACCTTCATCGTCTTTTGTTG+AGG | - | chr4_4:14185797-14185816 | None:intergenic | 40.0% |
ACAAAAGACGATGAAGGTTC+TGG | + | chr4_4:14185799-14185818 | Msa0671200:intron | 40.0% | |
GCTTTGATCTAGCAACTGTT+AGG | - | chr4_4:14185890-14185909 | None:intergenic | 40.0% | |
ACAGTTGCTAGATCAAAGCA+CGG | + | chr4_4:14185891-14185910 | Msa0671200:intron | 40.0% | |
ACCTAGATTACTTACGTCCA+TGG | - | chr4_4:14186334-14186353 | None:intergenic | 40.0% | |
TTTACACGAGACAAAGGATG+TGG | - | chr4_4:14186517-14186536 | None:intergenic | 40.0% | |
!! | TGTTGCTTTACACGAGACAA+AGG | - | chr4_4:14186523-14186542 | None:intergenic | 40.0% |
CGACCAGTCACATATTTAAG+TGG | + | chr4_4:14186730-14186749 | Msa0671200:CDS | 40.0% | |
GAGCCACTTAAATATGTGAC+TGG | - | chr4_4:14186736-14186755 | None:intergenic | 40.0% | |
GGACTCCATATATATGCATG+AGG | - | chr4_4:14186781-14186800 | None:intergenic | 40.0% | |
CTTGTTCCTAAACCAAAAGG+TGG | + | chr4_4:14186805-14186824 | Msa0671200:intron | 40.0% | |
! | GGATCAAAGTAACCACCTTT+TGG | - | chr4_4:14186820-14186839 | None:intergenic | 40.0% |
GATTGACCCAATACAAATCG+AGG | - | chr4_4:14187239-14187258 | None:intergenic | 40.0% | |
CTCTTAAGCATGGAGAAATG+TGG | - | chr4_4:14187304-14187323 | None:intergenic | 40.0% | |
CACATTTCTCCATGCTTAAG+AGG | + | chr4_4:14187302-14187321 | Msa0671200:intron | 40.0% | |
AAGACTGAACCTCTTAAGCA+TGG | - | chr4_4:14187314-14187333 | None:intergenic | 40.0% | |
! | CAAAACTAGCTTGTAAGGTG+AGG | + | chr4_4:14187444-14187463 | Msa0671200:intron | 40.0% |
ATAGAATAGGTCACCGCTAT+CGG | - | chr4_4:14187568-14187587 | None:intergenic | 40.0% | |
! | AGAATTTGGGTCCCAAGTTT+TGG | + | chr4_4:14187590-14187609 | Msa0671200:intron | 40.0% |
CCAACACACTTCCAAAACTT+GGG | - | chr4_4:14187604-14187623 | None:intergenic | 40.0% | |
TCCAACACACTTCCAAAACT+TGG | - | chr4_4:14187605-14187624 | None:intergenic | 40.0% | |
!!! | AAGTTTTGGAAGTGTGTTGG+AGG | + | chr4_4:14187604-14187623 | Msa0671200:intron | 40.0% |
! | TGTTGGAGGTTTCTTGTTGT+GGG | + | chr4_4:14187618-14187637 | Msa0671200:intron | 40.0% |
ATCACTGTGTTTGTGTCTCA+AGG | + | chr4_4:14187707-14187726 | Msa0671200:intron | 40.0% | |
GTTTGTGTCTCAAGGTTTGT+TGG | + | chr4_4:14187715-14187734 | Msa0671200:intron | 40.0% | |
GGGCCTGATTAATGAACTAA+TGG | - | chr4_4:14187754-14187773 | None:intergenic | 40.0% | |
GTTCATTAATCAGGCCCATT+AGG | + | chr4_4:14187757-14187776 | Msa0671200:intron | 40.0% | |
ATGCATATACTTCAGCTTGG+GGG | + | chr4_4:14187920-14187939 | Msa0671200:intron | 40.0% | |
!! | AGCCATTTTACAAGAGACTC+GGG | - | chr4_4:14188173-14188192 | None:intergenic | 40.0% |
! | GTGACAAGCCGATTTACATT+GGG | + | chr4_4:14188201-14188220 | Msa0671200:CDS | 40.0% |
! | AAGCCGATTTACATTGGGTT+TGG | + | chr4_4:14188206-14188225 | Msa0671200:CDS | 40.0% |
!! | ATTGACTACACTGGTTTGGA+AGG | - | chr4_4:14188312-14188331 | None:intergenic | 40.0% |
! | TGCTATTGACTACACTGGTT+TGG | - | chr4_4:14188316-14188335 | None:intergenic | 40.0% |
! | TAGCATGCTATTGACTACAC+TGG | - | chr4_4:14188321-14188340 | None:intergenic | 40.0% |
TACTATTGTCTATCCTGTGG+TGG | - | chr4_4:14188363-14188382 | None:intergenic | 40.0% | |
CTCTACTATTGTCTATCCTG+TGG | - | chr4_4:14188366-14188385 | None:intergenic | 40.0% | |
CAGGATAGACAATAGTAGAG+TGG | + | chr4_4:14188366-14188385 | Msa0671200:intron | 40.0% | |
GCAAATTCCAAAAAGCCCTT+CGG | + | chr4_4:14188422-14188441 | Msa0671200:intron | 40.0% | |
! | ACTTATTCCGAAGGGCTTTT+TGG | - | chr4_4:14188432-14188451 | None:intergenic | 40.0% |
!!! | TCATCATGGCTTTTTGGTTG+GGG | + | chr4_4:14188454-14188473 | Msa0671200:intron | 40.0% |
!! | CTCCCTTTTTCCGTCATTTT+TGG | + | chr4_4:14188541-14188560 | Msa0671200:intron | 40.0% |
! | AAAACGCTATAGTGGGAACT+GGG | - | chr4_4:14188629-14188648 | None:intergenic | 40.0% |
! | TTCCCACTATAGCGTTTTCA+GGG | + | chr4_4:14188631-14188650 | Msa0671200:intron | 40.0% |
GTGTTATCAATCCCCAATAG+GGG | - | chr4_4:14188670-14188689 | None:intergenic | 40.0% | |
CAGTGTTATCAATCCCCAAT+AGG | - | chr4_4:14188672-14188691 | None:intergenic | 40.0% | |
ACACTGTTCCAAACCAATCA+TGG | + | chr4_4:14188686-14188705 | Msa0671200:intron | 40.0% | |
CACTGTTCCAAACCAATCAT+GGG | + | chr4_4:14188687-14188706 | Msa0671200:intron | 40.0% | |
GCAAGTCTGTTAGTTGTTGA+TGG | + | chr4_4:14188846-14188865 | Msa0671200:intron | 40.0% | |
!! | AGTTGTTGATGGGCTATATC+GGG | + | chr4_4:14188857-14188876 | Msa0671200:intron | 40.0% |
! | GTGCTAAGCTCACAATTTTG+TGG | + | chr4_4:14188939-14188958 | Msa0671200:intron | 40.0% |
! | TTTGTGGTCCTTTTTGTTGG+AGG | + | chr4_4:14188955-14188974 | Msa0671200:intron | 40.0% |
AGCATTCTCCTCCAACAAAA+AGG | - | chr4_4:14188966-14188985 | None:intergenic | 40.0% | |
! | TTTTGTTGGAGGAGAATGCT+TGG | + | chr4_4:14188966-14188985 | Msa0671200:intron | 40.0% |
!!! | CGGATTGAGTTGTTTTAGAG+GGG | + | chr4_4:14188995-14189014 | Msa0671200:intron | 40.0% |
! | AAGCCTTATCCCATTAAGTG+GGG | - | chr4_4:14189069-14189088 | None:intergenic | 40.0% |
! | GAAGCCTTATCCCATTAAGT+GGG | - | chr4_4:14189070-14189089 | None:intergenic | 40.0% |
! | TGAAGCCTTATCCCATTAAG+TGG | - | chr4_4:14189071-14189090 | None:intergenic | 40.0% |
! | GTTTTCTTGTCGTAACTCTC+GGG | + | chr4_4:14189105-14189124 | Msa0671200:intron | 40.0% |
! | GGAAGACCGACACTTTTATA+TGG | + | chr4_4:14189133-14189152 | Msa0671200:intron | 40.0% |
CGCTTATGTTATTCTCGTGT+TGG | - | chr4_4:14189183-14189202 | None:intergenic | 40.0% | |
CGGAAATGACATTGTTGCTA+GGG | + | chr4_4:14189206-14189225 | Msa0671200:intron | 40.0% | |
GGAAATGACATTGTTGCTAG+GGG | + | chr4_4:14189207-14189226 | Msa0671200:intron | 40.0% | |
ATATATAAAGAGAGGGAGGG+GGG | - | chr4_4:14189626-14189645 | None:intergenic | 40.0% | |
!! | CAGAGAGGCATCATCAATAA+AGG | + | chr4_4:14189728-14189747 | Msa0671200:CDS | 40.0% |
! | GAGGCATCATCAATAAAGGA+TGG | + | chr4_4:14189732-14189751 | Msa0671200:CDS | 40.0% |
GGCATCATCAATAAAGGATG+GGG | + | chr4_4:14189734-14189753 | Msa0671200:CDS | 40.0% | |
ATCATCAATAAAGGATGGGG+AGG | + | chr4_4:14189737-14189756 | Msa0671200:CDS | 40.0% | |
TGGATAATGTTCCCCATGAT+TGG | + | chr4_4:14189876-14189895 | Msa0671200:CDS | 40.0% | |
! | TTTTTGTAGGTGCATCATGG+AGG | + | chr4_4:14190089-14190108 | Msa0671200:intron | 40.0% |
!! | TTTGGTGATCAACCCTTTTG+GGG | + | chr4_4:14190253-14190272 | Msa0671200:CDS | 40.0% |
AGAGTACATGATAGAGGAGT+CGG | + | chr4_4:14190280-14190299 | Msa0671200:CDS | 40.0% | |
GTGTATCAGCCAAATGAAAC+GGG | + | chr4_4:14190412-14190431 | Msa0671200:intron | 40.0% | |
TCTTTCAGAAGTAGATTCGG+AGG | + | chr4_4:14190441-14190460 | Msa0671200:intron | 40.0% | |
CCAATGAGAAAGACTACATC+GGG | - | chr4_4:14190710-14190729 | None:intergenic | 40.0% | |
GCCAATGAGAAAGACTACAT+CGG | - | chr4_4:14190711-14190730 | None:intergenic | 40.0% | |
!!! | TGGAGTATTTTTAGGGCATG+TGG | - | chr4_4:14190800-14190819 | None:intergenic | 40.0% |
!! | ACAAAGGCAAACTGCTTTTC+GGG | + | chr4_4:14190942-14190961 | Msa0671200:intron | 40.0% |
CTTGTTGAAGCTGCGATAAT+TGG | + | chr4_4:14190982-14191001 | Msa0671200:intron | 40.0% | |
TGCCAAAGCTATGGAAAATG+AGG | + | chr4_4:14191260-14191279 | Msa0671200:CDS | 40.0% | |
AGCTATGGAAAATGAGGATG+GGG | + | chr4_4:14191266-14191285 | Msa0671200:CDS | 40.0% | |
! | TTAGTCTCGGGTTTCTTTTG+AGG | - | chr4_4:14191327-14191346 | None:intergenic | 40.0% |
GAGAAACAACTAGATGGAGA+TGG | - | chr4_4:14191357-14191376 | None:intergenic | 40.0% | |
CAGAGATTGAAAAACAGTGG+CGG | - | chr4_4:14191431-14191450 | None:intergenic | 40.0% | |
GACAGCACGGAAATATAGAT+TGG | - | chr4_4:14191460-14191479 | None:intergenic | 40.0% | |
TTTGCAATCACATGACAGCA+CGG | - | chr4_4:14191473-14191492 | None:intergenic | 40.0% | |
TGCGACCTAAATTCGTTGCA+CGG | - | chr4_4:14180370-14180389 | None:intergenic | 45.0% | |
CGAATTTAGGTCGCATTCAC+CGG | + | chr4_4:14180375-14180394 | Msa0671200:five_prime_UTR | 45.0% | |
AAGCACTACCAAGGAAGTTG+TGG | + | chr4_4:14180530-14180549 | Msa0671200:CDS | 45.0% | |
TATCATGTATTGCGGGACAG+AGG | + | chr4_4:14181110-14181129 | Msa0671200:intron | 45.0% | |
TCTTTGTATGTCTCTGCCTC+TGG | - | chr4_4:14181981-14182000 | None:intergenic | 45.0% | |
TGCTCGGAATGCCTAAATAC+AGG | - | chr4_4:14182206-14182225 | None:intergenic | 45.0% | |
GTATTTAGGCATTCCGAGCA+CGG | + | chr4_4:14182206-14182225 | Msa0671200:intron | 45.0% | |
TATTTAGGCATTCCGAGCAC+GGG | + | chr4_4:14182207-14182226 | Msa0671200:intron | 45.0% | |
GGATACATCTACTGGCAATG+TGG | - | chr4_4:14182247-14182266 | None:intergenic | 45.0% | |
TTGCCAGTAGATGTATCCCA+TGG | + | chr4_4:14182249-14182268 | Msa0671200:CDS | 45.0% | |
TCTCCATGGGATACATCTAC+TGG | - | chr4_4:14182255-14182274 | None:intergenic | 45.0% | |
TTTGGATGGAGAGATGTGGT+TGG | + | chr4_4:14182564-14182583 | Msa0671200:intron | 45.0% | |
TTGGATGGAGAGATGTGGTT+GGG | + | chr4_4:14182565-14182584 | Msa0671200:intron | 45.0% | |
GAGATGTGGTTGGGAAAATG+AGG | + | chr4_4:14182574-14182593 | Msa0671200:intron | 45.0% | |
TGGTTGGGAAAATGAGGTGT+GGG | + | chr4_4:14182580-14182599 | Msa0671200:intron | 45.0% | |
GATGTTGAACCTGATGCTCT+TGG | + | chr4_4:14182888-14182907 | Msa0671200:CDS | 45.0% | |
GTACAGCCATTTGTCGCAAT+AGG | + | chr4_4:14183023-14183042 | Msa0671200:CDS | 45.0% | |
CGCAATAGGAAAACGCTTAC+AGG | + | chr4_4:14183037-14183056 | Msa0671200:CDS | 45.0% | |
CAACAACTAGCAGCACATGA+AGG | - | chr4_4:14183108-14183127 | None:intergenic | 45.0% | |
! | CTTCATGTGCTGCTAGTTGT+TGG | + | chr4_4:14183106-14183125 | Msa0671200:intron | 45.0% |
!! | TGCTGCTAGTTGTTGGTTCA+TGG | + | chr4_4:14183113-14183132 | Msa0671200:intron | 45.0% |
!! | GCTGCTAGTTGTTGGTTCAT+GGG | + | chr4_4:14183114-14183133 | Msa0671200:intron | 45.0% |
CCTGCGCGTAAATGTGAATA+AGG | - | chr4_4:14183721-14183740 | None:intergenic | 45.0% | |
CCTTATTCACATTTACGCGC+AGG | + | chr4_4:14183718-14183737 | Msa0671200:intron | 45.0% | |
CACATTTACGCGCAGGATTA+TGG | + | chr4_4:14183725-14183744 | Msa0671200:intron | 45.0% | |
!!! | GTTTGTTTTGACAGCTGGGT+TGG | + | chr4_4:14183787-14183806 | Msa0671200:CDS | 45.0% |
!! | GGGTTGGAGTTTTATCCGTT+AGG | + | chr4_4:14183803-14183822 | Msa0671200:CDS | 45.0% |
CGTAGTACATACATCCAGCA+AGG | - | chr4_4:14183844-14183863 | None:intergenic | 45.0% | |
CTCTGAACAGGTATCTCAGA+GGG | - | chr4_4:14184307-14184326 | None:intergenic | 45.0% | |
TCTCTGAACAGGTATCTCAG+AGG | - | chr4_4:14184308-14184327 | None:intergenic | 45.0% | |
TATACCATATGCTGGGGGAT+TGG | - | chr4_4:14184425-14184444 | None:intergenic | 45.0% | |
TATGCTCGGCAGATTAGACT+CGG | + | chr4_4:14185331-14185350 | Msa0671200:intron | 45.0% | |
! | GGCGAAGTACAGTTTTTGCA+TGG | + | chr4_4:14185648-14185667 | Msa0671200:intron | 45.0% |
! | AAGACGATGAAGGTTCTGGT+TGG | + | chr4_4:14185803-14185822 | Msa0671200:intron | 45.0% |
!! | TTTCCCTGAAAAGTGCTGCA+AGG | + | chr4_4:14185826-14185845 | Msa0671200:intron | 45.0% |
!! | TTCCCTGAAAAGTGCTGCAA+GGG | + | chr4_4:14185827-14185846 | Msa0671200:intron | 45.0% |
CAGTTGCTAGATCAAAGCAC+GGG | + | chr4_4:14185892-14185911 | Msa0671200:intron | 45.0% | |
GCCATGGACGTAAGTAATCT+AGG | + | chr4_4:14186330-14186349 | Msa0671200:intron | 45.0% | |
TCTCGTGTAAAGCAACAAGC+TGG | + | chr4_4:14186526-14186545 | Msa0671200:CDS | 45.0% | |
!! | GTCGACTCGTTAATTTGGCT+TGG | + | chr4_4:14186661-14186680 | Msa0671200:CDS | 45.0% |
CTCATGTTAATCATTCCCCG+TGG | + | chr4_4:14187258-14187277 | Msa0671200:intron | 45.0% | |
TCCCCGTGGCATATAAAGAT+TGG | + | chr4_4:14187272-14187291 | Msa0671200:intron | 45.0% | |
GCCAATCTTTATATGCCACG+GGG | - | chr4_4:14187276-14187295 | None:intergenic | 45.0% | |
CGCCAATCTTTATATGCCAC+GGG | - | chr4_4:14187277-14187296 | None:intergenic | 45.0% | |
GCGCCAATCTTTATATGCCA+CGG | - | chr4_4:14187278-14187297 | None:intergenic | 45.0% | |
AGGTTCAGTCTTGAGTGTGA+GGG | + | chr4_4:14187322-14187341 | Msa0671200:intron | 45.0% | |
TTGTCTATGCTTCGGATGTG+TGG | + | chr4_4:14187378-14187397 | Msa0671200:intron | 45.0% | |
CATCTGAAGAGTGACTCTAG+TGG | + | chr4_4:14187541-14187560 | Msa0671200:intron | 45.0% | |
TAGAATAGGTCACCGCTATC+GGG | - | chr4_4:14187567-14187586 | None:intergenic | 45.0% | |
!!! | CCCAAGTTTTGGAAGTGTGT+TGG | + | chr4_4:14187601-14187620 | Msa0671200:intron | 45.0% |
GTGTTGGAGGTTTCTTGTTG+TGG | + | chr4_4:14187617-14187636 | Msa0671200:intron | 45.0% | |
TGCATATACTTCAGCTTGGG+GGG | + | chr4_4:14187921-14187940 | Msa0671200:intron | 45.0% | |
! | CATTTTACAAGAGACTCGGG+AGG | - | chr4_4:14188170-14188189 | None:intergenic | 45.0% |
CTCCCGAGTCTCTTGTAAAA+TGG | + | chr4_4:14188168-14188187 | Msa0671200:CDS | 45.0% | |
! | GGTGACAAGCCGATTTACAT+TGG | + | chr4_4:14188200-14188219 | Msa0671200:CDS | 45.0% |
! | TTACATTGGGTTTGGTAGCC+TGG | + | chr4_4:14188214-14188233 | Msa0671200:CDS | 45.0% |
! | TAGCGGGCACAACTTAGAAT+GGG | + | chr4_4:14188396-14188415 | Msa0671200:intron | 45.0% |
! | GAAAACGCTATAGTGGGAAC+TGG | - | chr4_4:14188630-14188649 | None:intergenic | 45.0% |
! | GTTCCCACTATAGCGTTTTC+AGG | + | chr4_4:14188630-14188649 | Msa0671200:intron | 45.0% |
GTCCCTGAAAACGCTATAGT+GGG | - | chr4_4:14188636-14188655 | None:intergenic | 45.0% | |
TGTCCCTGAAAACGCTATAG+TGG | - | chr4_4:14188637-14188656 | None:intergenic | 45.0% | |
ACAGTTGCTACAACCCCTAT+TGG | + | chr4_4:14188654-14188673 | Msa0671200:intron | 45.0% | |
CAGTTGCTACAACCCCTATT+GGG | + | chr4_4:14188655-14188674 | Msa0671200:intron | 45.0% | |
AGTTGCTACAACCCCTATTG+GGG | + | chr4_4:14188656-14188675 | Msa0671200:intron | 45.0% | |
! | CAATCTGCCCATGATTGGTT+TGG | - | chr4_4:14188697-14188716 | None:intergenic | 45.0% |
TGAAGCAATCTGCCCATGAT+TGG | - | chr4_4:14188702-14188721 | None:intergenic | 45.0% | |
CAGATTGCTTCACCCAAAGT+TGG | + | chr4_4:14188710-14188729 | Msa0671200:intron | 45.0% | |
AGAAAAGTCTCCAGGTAGTC+AGG | - | chr4_4:14188888-14188907 | None:intergenic | 45.0% | |
TTAGAGGGGTTATTACGGGA+AGG | + | chr4_4:14189009-14189028 | Msa0671200:intron | 45.0% | |
CGAGAATAACATAAGCGCAG+CGG | + | chr4_4:14189186-14189205 | Msa0671200:intron | 45.0% | |
GCGGAAATGACATTGTTGCT+AGG | + | chr4_4:14189205-14189224 | Msa0671200:intron | 45.0% | |
AAGGCTTATCCCACTAAGTG+GGG | - | chr4_4:14189485-14189504 | None:intergenic | 45.0% | |
CAAGGCTTATCCCACTAAGT+GGG | - | chr4_4:14189486-14189505 | None:intergenic | 45.0% | |
TATATAAAGAGAGGGAGGGG+GGG | - | chr4_4:14189625-14189644 | None:intergenic | 45.0% | |
GGATCTTGAACAGGCTGTAA+CGG | - | chr4_4:14189662-14189681 | None:intergenic | 45.0% | |
!! | TGTAGAAGCACTGGAAACCA+CGG | + | chr4_4:14189703-14189722 | Msa0671200:CDS | 45.0% |
AATAAAGGATGGGGAGGTCT+TGG | + | chr4_4:14189743-14189762 | Msa0671200:CDS | 45.0% | |
ATAAAGGATGGGGAGGTCTT+GGG | + | chr4_4:14189744-14189763 | Msa0671200:CDS | 45.0% | |
TTTCCCAGTGACAGAACCAA+AGG | + | chr4_4:14189838-14189857 | Msa0671200:intron | 45.0% | |
!! | AGTCCTTTGGTTCTGTCACT+GGG | - | chr4_4:14189844-14189863 | None:intergenic | 45.0% |
TGTACTCTCTCACCCCAAAA+GGG | - | chr4_4:14190268-14190287 | None:intergenic | 45.0% | |
ATGTACTCTCTCACCCCAAA+AGG | - | chr4_4:14190269-14190288 | None:intergenic | 45.0% | |
! | GGTGAGAGAGTACATGATAG+AGG | + | chr4_4:14190274-14190293 | Msa0671200:CDS | 45.0% |
GAAAACTCGTCAACTGGGAT+AGG | - | chr4_4:14190313-14190332 | None:intergenic | 45.0% | |
GAAGCGAAAACTCGTCAACT+GGG | - | chr4_4:14190318-14190337 | None:intergenic | 45.0% | |
AGAAGCAAGCCCGTTTCATT+TGG | - | chr4_4:14190424-14190443 | None:intergenic | 45.0% | |
CGGCATTAGGCAATAATAGC+CGG | + | chr4_4:14190648-14190667 | Msa0671200:intron | 45.0% | |
GGCATTAGGCAATAATAGCC+GGG | + | chr4_4:14190649-14190668 | Msa0671200:intron | 45.0% | |
CCCGATGTAGTCTTTCTCAT+TGG | + | chr4_4:14190707-14190726 | Msa0671200:intron | 45.0% | |
GTAGTCTTTCTCATTGGCCA+TGG | + | chr4_4:14190713-14190732 | Msa0671200:intron | 45.0% | |
! | GGATTAGGTGTTTTCCTCCA+TGG | - | chr4_4:14190733-14190752 | None:intergenic | 45.0% |
TGGGTAAAACAAGGCTGAAC+AGG | + | chr4_4:14190771-14190790 | Msa0671200:intron | 45.0% | |
TCTGTCTGTCCACTCTCAAT+TGG | - | chr4_4:14190820-14190839 | None:intergenic | 45.0% | |
TGTAAAGTGACAACAGGGAG+TGG | - | chr4_4:14190898-14190917 | None:intergenic | 45.0% | |
TTGCGTGGCCTCAAAATTTG+AGG | + | chr4_4:14191114-14191133 | Msa0671200:intron | 45.0% | |
GAAAATGAGGATGGGGTAAC+TGG | + | chr4_4:14191273-14191292 | Msa0671200:CDS | 45.0% | |
! | AGATGGCTCTGTGTTAGTCT+CGG | - | chr4_4:14191340-14191359 | None:intergenic | 45.0% |
TCACCATGACCAGATACATG+CGG | + | chr4_4:14191628-14191647 | Msa0671200:three_prime_UTR | 45.0% | |
!!! | CAAATTAATTTTATAAATAT+CGG | - | chr4_4:14180999-14181018 | None:intergenic | 5.0% |
!!! | TTATTTTACATAATTAATTT+TGG | + | chr4_4:14181136-14181155 | Msa0671200:intron | 5.0% |
!! | AAAATAAATAAATTATGATA+TGG | - | chr4_4:14182673-14182692 | None:intergenic | 5.0% |
!! | CTTGGTAGTGCTTTCGCTGT+TGG | - | chr4_4:14180523-14180542 | None:intergenic | 50.0% |
!! | CAACAGCGAAAGCACTACCA+AGG | + | chr4_4:14180521-14180540 | Msa0671200:CDS | 50.0% |
TTTGGAAGAATGACGGCGCT+AGG | + | chr4_4:14181154-14181173 | Msa0671200:intron | 50.0% | |
CATGTCCGCCAAAATGGTCA+AGG | + | chr4_4:14181626-14181645 | Msa0671200:intron | 50.0% | |
! | GTCTGCCTTGACCATTTTGG+CGG | - | chr4_4:14181634-14181653 | None:intergenic | 50.0% |
ATTTAGGCATTCCGAGCACG+GGG | + | chr4_4:14182208-14182227 | Msa0671200:intron | 50.0% | |
ACTTTAGACAACCCCGTGCT+CGG | - | chr4_4:14182222-14182241 | None:intergenic | 50.0% | |
GTGGTTGGGAAAATGAGGTG+TGG | + | chr4_4:14182579-14182598 | Msa0671200:intron | 50.0% | |
! | ACTTTTGGATCGCCCCCTAA+CGG | - | chr4_4:14183821-14183840 | None:intergenic | 50.0% |
GGGACACCCGAATCAATATC+AGG | - | chr4_4:14184379-14184398 | None:intergenic | 50.0% | |
TTGAAAAGCCAATGCGACCG+TGG | + | chr4_4:14184522-14184541 | Msa0671200:intron | 50.0% | |
GAGTCAGCACAGTTAGGTGA+AGG | - | chr4_4:14184998-14185017 | None:intergenic | 50.0% | |
TGTGCTGAGTCAGCACAGTT+AGG | - | chr4_4:14185004-14185023 | None:intergenic | 50.0% | |
ATGCTCGGCAGATTAGACTC+GGG | + | chr4_4:14185332-14185351 | Msa0671200:intron | 50.0% | |
ATATGGCCCAGTCTCAGCAA+TGG | - | chr4_4:14185502-14185521 | None:intergenic | 50.0% | |
GGTACTAAGAAGAAGGGCCA+CGG | + | chr4_4:14185627-14185646 | Msa0671200:intron | 50.0% | |
GCAAAAACTGTACTTCGCCG+TGG | - | chr4_4:14185647-14185666 | None:intergenic | 50.0% | |
! | GACCCTTGCAGCACTTTTCA+GGG | - | chr4_4:14185832-14185851 | None:intergenic | 50.0% |
TTGTAAGGCCTCTGCGACAT+GGG | - | chr4_4:14186284-14186303 | None:intergenic | 50.0% | |
TTTGTAAGGCCTCTGCGACA+TGG | - | chr4_4:14186285-14186304 | None:intergenic | 50.0% | |
GGATGTGGAAAGTCAGCTGT+TGG | - | chr4_4:14186502-14186521 | None:intergenic | 50.0% | |
GAGGTTCAGTCTTGAGTGTG+AGG | + | chr4_4:14187321-14187340 | Msa0671200:intron | 50.0% | |
! | AGTAGAGTGGTTTGGCGTAG+CGG | + | chr4_4:14188379-14188398 | Msa0671200:intron | 50.0% |
!! | GTAGCGGGCACAACTTAGAA+TGG | + | chr4_4:14188395-14188414 | Msa0671200:intron | 50.0% |
AGCGGGCACAACTTAGAATG+GGG | + | chr4_4:14188397-14188416 | Msa0671200:intron | 50.0% | |
GAGTAGCCCTAGAACTGCTT+TGG | - | chr4_4:14188509-14188528 | None:intergenic | 50.0% | |
GCTCCCCACTTAATGGGATA+AGG | + | chr4_4:14189063-14189082 | Msa0671200:intron | 50.0% | |
!! | ATATGGTACGGAGTGTTGGG+CGG | + | chr4_4:14189150-14189169 | Msa0671200:intron | 50.0% |
! | ATTGTTGCTAGGGGTGTGCA+TGG | + | chr4_4:14189216-14189235 | Msa0671200:intron | 50.0% |
CTTATCCCACTAAGTGGGGT+CGG | - | chr4_4:14189481-14189500 | None:intergenic | 50.0% | |
CCAAGGCTTATCCCACTAAG+TGG | - | chr4_4:14189487-14189506 | None:intergenic | 50.0% | |
CCACTTAGTGGGATAAGCCT+TGG | + | chr4_4:14189484-14189503 | Msa0671200:intron | 50.0% | |
!! | GTAGAAGCACTGGAAACCAC+GGG | + | chr4_4:14189704-14189723 | Msa0671200:CDS | 50.0% |
TAAAGGATGGGGAGGTCTTG+GGG | + | chr4_4:14189745-14189764 | Msa0671200:CDS | 50.0% | |
!! | GAGTCCTTTGGTTCTGTCAC+TGG | - | chr4_4:14189845-14189864 | None:intergenic | 50.0% |
AACTCGTCAACTGGGATAGG+TGG | - | chr4_4:14190310-14190329 | None:intergenic | 50.0% | |
GGAAGCGAAAACTCGTCAAC+TGG | - | chr4_4:14190319-14190338 | None:intergenic | 50.0% | |
! | GGCAATAATAGCCGGGTTAG+AGG | + | chr4_4:14190656-14190675 | Msa0671200:intron | 50.0% |
! | ATAATAGCCGGGTTAGAGGC+TGG | + | chr4_4:14190660-14190679 | Msa0671200:intron | 50.0% |
!! | CTGGTTGGGCAGCTTTAAGT+TGG | + | chr4_4:14190679-14190698 | Msa0671200:intron | 50.0% |
GTCTTTCTCATTGGCCATGG+AGG | + | chr4_4:14190716-14190735 | Msa0671200:intron | 50.0% | |
! | GATGGCTCTGTGTTAGTCTC+GGG | - | chr4_4:14191339-14191358 | None:intergenic | 50.0% |
ATTCCTGATCCAGTGCAAGC+TGG | + | chr4_4:14191400-14191419 | Msa0671200:exon | 50.0% | |
AGACCGCATGTATCTGGTCA+TGG | - | chr4_4:14191634-14191653 | None:intergenic | 50.0% | |
GGGATTAGACCGCATGTATC+TGG | - | chr4_4:14191640-14191659 | None:intergenic | 50.0% | |
CAGAGCGGCAGAGACATCTA+AGG | + | chr4_4:14182322-14182341 | Msa0671200:CDS | 55.0% | |
! | GCAGAGACATCTAAGGCCTG+AGG | + | chr4_4:14182329-14182348 | Msa0671200:CDS | 55.0% |
! | GAACCTGATGCTCTTGGTGC+TGG | + | chr4_4:14182894-14182913 | Msa0671200:CDS | 55.0% |
!! | GATCCAGCACCAAGAGCATC+AGG | - | chr4_4:14182900-14182919 | None:intergenic | 55.0% |
GGCGATCCAAAAGTCCTTGC+TGG | + | chr4_4:14183827-14183846 | Msa0671200:CDS | 55.0% | |
ATGGCCAATCCCCCAGCATA+TGG | + | chr4_4:14184418-14184437 | Msa0671200:CDS | 55.0% | |
TGCTCGGCAGATTAGACTCG+GGG | + | chr4_4:14185333-14185352 | Msa0671200:intron | 55.0% | |
AGATTAGACTCGGGGAGGGA+GGG | + | chr4_4:14185341-14185360 | Msa0671200:intron | 55.0% | |
GTCTCAGCAATGGCCGGAAT+TGG | - | chr4_4:14185492-14185511 | None:intergenic | 55.0% | |
ATTCCGGCCATTGCTGAGAC+TGG | + | chr4_4:14185492-14185511 | Msa0671200:intron | 55.0% | |
TTCCGGCCATTGCTGAGACT+GGG | + | chr4_4:14185493-14185512 | Msa0671200:intron | 55.0% | |
! | CGACCCTTGCAGCACTTTTC+AGG | - | chr4_4:14185833-14185852 | None:intergenic | 55.0% |
GGTCGTTGTCGTCTTGTCGA+CGG | + | chr4_4:14185848-14185867 | Msa0671200:intron | 55.0% | |
GTCGTTGTCGTCTTGTCGAC+GGG | + | chr4_4:14185849-14185868 | Msa0671200:intron | 55.0% | |
! | TGTCGTCTTGTCGACGGGTT+TGG | + | chr4_4:14185854-14185873 | Msa0671200:intron | 55.0% |
! | GTCGTCTTGTCGACGGGTTT+GGG | + | chr4_4:14185855-14185874 | Msa0671200:intron | 55.0% |
! | TCGTCTTGTCGACGGGTTTG+GGG | + | chr4_4:14185856-14185875 | Msa0671200:intron | 55.0% |
! | GGAAAGTCAGCTGTTGGCCT+GGG | - | chr4_4:14186496-14186515 | None:intergenic | 55.0% |
TGGAAAGTCAGCTGTTGGCC+TGG | - | chr4_4:14186497-14186516 | None:intergenic | 55.0% | |
TGACTCTAGTGGCCCGATAG+CGG | + | chr4_4:14187552-14187571 | Msa0671200:intron | 55.0% | |
! | GCTATAGGCTTTATCGGCCC+TGG | + | chr4_4:14188337-14188356 | Msa0671200:intron | 55.0% |
TGTCTATCCTGTGGTGGCCA+GGG | - | chr4_4:14188357-14188376 | None:intergenic | 55.0% | |
TTGTCTATCCTGTGGTGGCC+AGG | - | chr4_4:14188358-14188377 | None:intergenic | 55.0% | |
! | GTAGAGTGGTTTGGCGTAGC+GGG | + | chr4_4:14188380-14188399 | Msa0671200:intron | 55.0% |
TCGGGTTTGTCCTGACTACC+TGG | + | chr4_4:14188875-14188894 | Msa0671200:intron | 55.0% | |
CCAAGCGCCAAAGAGATGTG+AGG | - | chr4_4:14189044-14189063 | None:intergenic | 55.0% | |
CCTCACATCTCTTTGGCGCT+TGG | + | chr4_4:14189041-14189060 | Msa0671200:intron | 55.0% | |
CGCTTGGCTCCCCACTTAAT+GGG | + | chr4_4:14189057-14189076 | Msa0671200:intron | 55.0% | |
TGTCGTAACTCTCGGGCAAC+TGG | + | chr4_4:14189112-14189131 | Msa0671200:intron | 55.0% | |
ACTAAGTGGGGTCGGCTACA+TGG | - | chr4_4:14189473-14189492 | None:intergenic | 55.0% | |
ATGTAGCCGACCCCACTTAG+TGG | + | chr4_4:14189472-14189491 | Msa0671200:intron | 55.0% | |
TGTAGCCGACCCCACTTAGT+GGG | + | chr4_4:14189473-14189492 | Msa0671200:intron | 55.0% | |
TAGGTGCATCATGGAGGAGC+AGG | + | chr4_4:14190095-14190114 | Msa0671200:intron | 55.0% | |
GAGCAGGAACAACAGCTGCA+GGG | + | chr4_4:14190111-14190130 | Msa0671200:CDS | 55.0% | |
CGTCAACTGGGATAGGTGGA+GGG | - | chr4_4:14190306-14190325 | None:intergenic | 55.0% | |
TCGTCAACTGGGATAGGTGG+AGG | - | chr4_4:14190307-14190326 | None:intergenic | 55.0% | |
TGACCAGCTTGCACTGGATC+AGG | - | chr4_4:14191406-14191425 | None:intergenic | 55.0% | |
GTCGTACACGACGGCGGAAA+TGG | + | chr4_4:14180410-14180429 | Msa0671200:exon | 60.0% | |
GTACACGACGGCGGAAATGG+CGG | + | chr4_4:14180413-14180432 | Msa0671200:exon | 60.0% | |
GAAGAACGGCGGCGATTCTG+CGG | - | chr4_4:14180444-14180463 | None:intergenic | 60.0% | |
GGAAGAATGACGGCGCTAGG+CGG | + | chr4_4:14181157-14181176 | Msa0671200:intron | 60.0% | |
GAAGAATGACGGCGCTAGGC+GGG | + | chr4_4:14181158-14181177 | Msa0671200:intron | 60.0% | |
! | CGGAGAAGCATGGAGAGAGC+AGG | - | chr4_4:14181931-14181950 | None:intergenic | 60.0% |
GGTATCTCAGAGGGTCCCGA+TGG | - | chr4_4:14184298-14184317 | None:intergenic | 60.0% | |
GAATAGCTGCCCCAACGCCA+CGG | - | chr4_4:14184542-14184561 | None:intergenic | 60.0% | |
TCGGCAGATTAGACTCGGGG+AGG | + | chr4_4:14185336-14185355 | Msa0671200:intron | 60.0% | |
CGGCAGATTAGACTCGGGGA+GGG | + | chr4_4:14185337-14185356 | Msa0671200:intron | 60.0% | |
CAGATTAGACTCGGGGAGGG+AGG | + | chr4_4:14185340-14185359 | Msa0671200:intron | 60.0% | |
GATTAGACTCGGGGAGGGAG+GGG | + | chr4_4:14185342-14185361 | Msa0671200:intron | 60.0% | |
ATTAGACTCGGGGAGGGAGG+GGG | + | chr4_4:14185343-14185362 | Msa0671200:intron | 60.0% | |
AGGGCATACCCATGTCGCAG+AGG | + | chr4_4:14186273-14186292 | Msa0671200:intron | 60.0% | |
GCGCTTGGCTCCCCACTTAA+TGG | + | chr4_4:14189056-14189075 | Msa0671200:intron | 60.0% | |
CTGGAAACCACGGGACAGAG+AGG | + | chr4_4:14189713-14189732 | Msa0671200:CDS | 60.0% | |
GATGATGCCTCTCTGTCCCG+TGG | - | chr4_4:14189723-14189742 | None:intergenic | 60.0% | |
GGGAGGTCTTGGGGACTGTA+AGG | + | chr4_4:14189754-14189773 | Msa0671200:intron | 60.0% | |
GGAGCAGGAACAACAGCTGC+AGG | + | chr4_4:14190110-14190129 | Msa0671200:CDS | 60.0% | |
! | TAGCCGGGTTAGAGGCTGGT+TGG | + | chr4_4:14190664-14190683 | Msa0671200:intron | 60.0% |
! | AGCCGGGTTAGAGGCTGGTT+GGG | + | chr4_4:14190665-14190684 | Msa0671200:intron | 60.0% |
TGCCCAACCAGCCTCTAACC+CGG | - | chr4_4:14190670-14190689 | None:intergenic | 60.0% | |
GTACGACGCGCGCGAGATTC+CGG | - | chr4_4:14180397-14180416 | None:intergenic | 65.0% | |
AGCCAATGCGACCGTGGCGT+TGG | + | chr4_4:14184528-14184547 | Msa0671200:intron | 65.0% | |
GCCAATGCGACCGTGGCGTT+GGG | + | chr4_4:14184529-14184548 | Msa0671200:intron | 65.0% | |
CCAATGCGACCGTGGCGTTG+GGG | + | chr4_4:14184530-14184549 | Msa0671200:intron | 65.0% | |
GGCCCAGTCTCAGCAATGGC+CGG | - | chr4_4:14185498-14185517 | None:intergenic | 65.0% | |
TTATCGGCCCTGGCCACCAC+AGG | + | chr4_4:14188347-14188366 | Msa0671200:intron | 65.0% | |
! | AAGAGAGGGAGGGGGGGCAT+GGG | - | chr4_4:14189619-14189638 | None:intergenic | 65.0% |
AAAGAGAGGGAGGGGGGGCA+TGG | - | chr4_4:14189620-14189639 | None:intergenic | 65.0% | |
GCGGTCTGACCAGCTTGCAC+TGG | - | chr4_4:14191412-14191431 | None:intergenic | 65.0% | |
CTCGCGCGCGTCGTACACGA+CGG | + | chr4_4:14180401-14180420 | Msa0671200:five_prime_UTR | 70.0% | |
CCCCAACGCCACGGTCGCAT+TGG | - | chr4_4:14184533-14184552 | None:intergenic | 70.0% | |
GCGCGCGTCGTACACGACGG+CGG | + | chr4_4:14180404-14180423 | Msa0671200:five_prime_UTR | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_4 | gene | 14180229 | 14191745 | 14180229 | ID=Msa0671200;Name=Msa0671200 |
chr4_4 | mRNA | 14180229 | 14191745 | 14180229 | ID=Msa0671200-mRNA-1;Parent=Msa0671200;Name=Msa0671200-mRNA-1;_AED=0.11;_eAED=0.11;_QI=200|1|1|1|0.8|0.75|16|294|620 |
chr4_4 | exon | 14180229 | 14180609 | 14180229 | ID=Msa0671200-mRNA-1:exon:4371;Parent=Msa0671200-mRNA-1 |
chr4_4 | exon | 14182214 | 14182395 | 14182214 | ID=Msa0671200-mRNA-1:exon:4372;Parent=Msa0671200-mRNA-1 |
chr4_4 | exon | 14182822 | 14183058 | 14182822 | ID=Msa0671200-mRNA-1:exon:4373;Parent=Msa0671200-mRNA-1 |
chr4_4 | exon | 14183740 | 14183851 | 14183740 | ID=Msa0671200-mRNA-1:exon:4374;Parent=Msa0671200-mRNA-1 |
chr4_4 | exon | 14184269 | 14184439 | 14184269 | ID=Msa0671200-mRNA-1:exon:4375;Parent=Msa0671200-mRNA-1 |
chr4_4 | exon | 14186275 | 14186338 | 14186275 | ID=Msa0671200-mRNA-1:exon:4376;Parent=Msa0671200-mRNA-1 |
chr4_4 | exon | 14186498 | 14186555 | 14186498 | ID=Msa0671200-mRNA-1:exon:4377;Parent=Msa0671200-mRNA-1 |
chr4_4 | exon | 14186646 | 14186823 | 14186646 | ID=Msa0671200-mRNA-1:exon:4378;Parent=Msa0671200-mRNA-1 |
chr4_4 | exon | 14188105 | 14188235 | 14188105 | ID=Msa0671200-mRNA-1:exon:4379;Parent=Msa0671200-mRNA-1 |
chr4_4 | exon | 14189668 | 14189770 | 14189668 | ID=Msa0671200-mRNA-1:exon:4380;Parent=Msa0671200-mRNA-1 |
chr4_4 | exon | 14189846 | 14189922 | 14189846 | ID=Msa0671200-mRNA-1:exon:4381;Parent=Msa0671200-mRNA-1 |
chr4_4 | exon | 14190098 | 14190145 | 14190098 | ID=Msa0671200-mRNA-1:exon:4382;Parent=Msa0671200-mRNA-1 |
chr4_4 | exon | 14190229 | 14190378 | 14190229 | ID=Msa0671200-mRNA-1:exon:4383;Parent=Msa0671200-mRNA-1 |
chr4_4 | exon | 14191237 | 14191467 | 14191237 | ID=Msa0671200-mRNA-1:exon:4384;Parent=Msa0671200-mRNA-1 |
chr4_4 | exon | 14191492 | 14191594 | 14191492 | ID=Msa0671200-mRNA-1:exon:4385;Parent=Msa0671200-mRNA-1 |
chr4_4 | exon | 14191615 | 14191745 | 14191615 | ID=Msa0671200-mRNA-1:exon:4386;Parent=Msa0671200-mRNA-1 |
chr4_4 | five_prime_UTR | 14180229 | 14180428 | 14180229 | ID=Msa0671200-mRNA-1:five_prime_utr;Parent=Msa0671200-mRNA-1 |
chr4_4 | CDS | 14180429 | 14180609 | 14180429 | ID=Msa0671200-mRNA-1:cds;Parent=Msa0671200-mRNA-1 |
chr4_4 | CDS | 14182214 | 14182395 | 14182214 | ID=Msa0671200-mRNA-1:cds;Parent=Msa0671200-mRNA-1 |
chr4_4 | CDS | 14182822 | 14183058 | 14182822 | ID=Msa0671200-mRNA-1:cds;Parent=Msa0671200-mRNA-1 |
chr4_4 | CDS | 14183740 | 14183851 | 14183740 | ID=Msa0671200-mRNA-1:cds;Parent=Msa0671200-mRNA-1 |
chr4_4 | CDS | 14184269 | 14184439 | 14184269 | ID=Msa0671200-mRNA-1:cds;Parent=Msa0671200-mRNA-1 |
chr4_4 | CDS | 14186275 | 14186338 | 14186275 | ID=Msa0671200-mRNA-1:cds;Parent=Msa0671200-mRNA-1 |
chr4_4 | CDS | 14186498 | 14186555 | 14186498 | ID=Msa0671200-mRNA-1:cds;Parent=Msa0671200-mRNA-1 |
chr4_4 | CDS | 14186646 | 14186823 | 14186646 | ID=Msa0671200-mRNA-1:cds;Parent=Msa0671200-mRNA-1 |
chr4_4 | CDS | 14188105 | 14188235 | 14188105 | ID=Msa0671200-mRNA-1:cds;Parent=Msa0671200-mRNA-1 |
chr4_4 | CDS | 14189668 | 14189770 | 14189668 | ID=Msa0671200-mRNA-1:cds;Parent=Msa0671200-mRNA-1 |
chr4_4 | CDS | 14189846 | 14189922 | 14189846 | ID=Msa0671200-mRNA-1:cds;Parent=Msa0671200-mRNA-1 |
chr4_4 | CDS | 14190098 | 14190145 | 14190098 | ID=Msa0671200-mRNA-1:cds;Parent=Msa0671200-mRNA-1 |
chr4_4 | CDS | 14190229 | 14190378 | 14190229 | ID=Msa0671200-mRNA-1:cds;Parent=Msa0671200-mRNA-1 |
chr4_4 | CDS | 14191237 | 14191407 | 14191237 | ID=Msa0671200-mRNA-1:cds;Parent=Msa0671200-mRNA-1 |
chr4_4 | three_prime_UTR | 14191408 | 14191467 | 14191408 | ID=Msa0671200-mRNA-1:three_prime_utr;Parent=Msa0671200-mRNA-1 |
chr4_4 | three_prime_UTR | 14191492 | 14191594 | 14191492 | ID=Msa0671200-mRNA-1:three_prime_utr;Parent=Msa0671200-mRNA-1 |
chr4_4 | three_prime_UTR | 14191615 | 14191745 | 14191615 | ID=Msa0671200-mRNA-1:three_prime_utr;Parent=Msa0671200-mRNA-1 |
Gene Sequence |
Protein sequence |