Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0827520 | XP_003607199.1 | 99.652 | 287 | 1 | 0 | 1 | 287 | 1 | 287 | 0.0 | 588 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0827520 | sp|Q42564|APX3_ARATH | 78.472 | 288 | 60 | 2 | 1 | 287 | 1 | 287 | 2.99e-159 | 447 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0827520 | G7JNF5 | 99.652 | 287 | 1 | 0 | 1 | 287 | 1 | 287 | 0.0 | 588 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001550 | Msa0827520 | 0.812725 | 3.668969e-51 | -8.615850e-47 |
| Msa0002110 | Msa0827520 | 0.853613 | 2.127976e-61 | -8.615850e-47 |
| Msa0011450 | Msa0827520 | 0.826268 | 2.977848e-54 | -8.615850e-47 |
| Msa0029520 | Msa0827520 | 0.859278 | 4.618643e-63 | -8.615850e-47 |
| Msa0033840 | Msa0827520 | 0.808547 | 2.934913e-50 | -8.615850e-47 |
| Msa0042490 | Msa0827520 | 0.806539 | 7.833578e-50 | -8.615850e-47 |
| Msa0042950 | Msa0827520 | 0.811556 | 6.598698e-51 | -8.615850e-47 |
| Msa0056230 | Msa0827520 | 0.800052 | 1.726605e-48 | -8.615850e-47 |
| Msa0065670 | Msa0827520 | 0.816932 | 4.286086e-52 | -8.615850e-47 |
| Msa0066890 | Msa0827520 | 0.857273 | 1.825859e-62 | -8.615850e-47 |
| Msa0067590 | Msa0827520 | 0.839507 | 1.520101e-57 | -8.615850e-47 |
| Msa0079580 | Msa0827520 | 0.800467 | 1.421897e-48 | -8.615850e-47 |
| Msa0081610 | Msa0827520 | 0.836180 | 1.088394e-56 | -8.615850e-47 |
| Msa0093950 | Msa0827520 | 0.873265 | 1.681572e-67 | -8.615850e-47 |
| Msa0094170 | Msa0827520 | 0.828685 | 7.836502e-55 | -8.615850e-47 |
| Msa0095280 | Msa0827520 | 0.809833 | 1.555962e-50 | -8.615850e-47 |
| Msa0095810 | Msa0827520 | 0.854021 | 1.623701e-61 | -8.615850e-47 |
| Msa0111110 | Msa0827520 | 0.859753 | 3.325042e-63 | -8.615850e-47 |
| Msa0113370 | Msa0827520 | 0.829532 | 4.884989e-55 | -8.615850e-47 |
| Msa0603690 | Msa0827520 | 0.812555 | 3.997040e-51 | -8.615850e-47 |
| Msa0605040 | Msa0827520 | 0.839303 | 1.717329e-57 | -8.615850e-47 |
| Msa0605160 | Msa0827520 | 0.840151 | 1.033395e-57 | -8.615850e-47 |
| Msa0632430 | Msa0827520 | 0.803748 | 3.006754e-49 | -8.615850e-47 |
| Msa0637930 | Msa0827520 | 0.869341 | 3.328537e-66 | -8.615850e-47 |
| Msa0638010 | Msa0827520 | 0.868505 | 6.211545e-66 | -8.615850e-47 |
| Msa0654570 | Msa0827520 | 0.807042 | 6.130640e-50 | -8.615850e-47 |
| Msa0660960 | Msa0827520 | 0.838711 | 2.444249e-57 | -8.615850e-47 |
| Msa0671160 | Msa0827520 | 0.834210 | 3.418942e-56 | -8.615850e-47 |
| Msa0671200 | Msa0827520 | 0.828758 | 7.524154e-55 | -8.615850e-47 |
| Msa0686950 | Msa0827520 | 0.999224 | 5.705954e-297 | -8.615850e-47 |
| Msa0742370 | Msa0827520 | 0.812840 | 3.462987e-51 | -8.615850e-47 |
| Msa0779450 | Msa0827520 | 0.827320 | 1.670074e-54 | -8.615850e-47 |
| Msa0788450 | Msa0827520 | 0.821350 | 4.231278e-53 | -8.615850e-47 |
| Msa0796580 | Msa0827520 | 0.827658 | 1.385028e-54 | -8.615850e-47 |
| Msa0822320 | Msa0827520 | 0.811545 | 6.637478e-51 | -8.615850e-47 |
| Msa0823480 | Msa0827520 | 0.812672 | 3.768076e-51 | -8.615850e-47 |
| Msa0825570 | Msa0827520 | 0.821831 | 3.275622e-53 | -8.615850e-47 |
| Msa0826540 | Msa0827520 | 0.818901 | 1.538585e-52 | -8.615850e-47 |
| Msa0827520 | Msa0833950 | 0.866097 | 3.656993e-65 | -8.615850e-47 |
| Msa0827520 | Msa0862480 | 0.826903 | 2.101372e-54 | -8.615850e-47 |
| Msa0827520 | Msa0864820 | 0.833721 | 4.531106e-56 | -8.615850e-47 |
| Msa0827520 | Msa0881530 | 0.890218 | 1.201522e-73 | -8.615850e-47 |
| Msa0827520 | Msa0919120 | 0.869571 | 2.803247e-66 | -8.615850e-47 |
| Msa0827520 | Msa0925930 | -0.810284 | 1.244200e-50 | -8.615850e-47 |
| Msa0827520 | Msa0979070 | -0.800214 | 1.601066e-48 | -8.615850e-47 |
| Msa0827520 | Msa0982090 | 0.883418 | 4.561950e-71 | -8.615850e-47 |
| Msa0827520 | Msa0983680 | 0.811240 | 7.731065e-51 | -8.615850e-47 |
| Msa0827520 | Msa1039440 | 0.810273 | 1.251206e-50 | -8.615850e-47 |
| Msa0827520 | Msa1084680 | 0.840107 | 1.061133e-57 | -8.615850e-47 |
| Msa0827520 | Msa1085610 | 0.875747 | 2.414511e-68 | -8.615850e-47 |
| Msa0827520 | Msa1086320 | 0.837582 | 4.775721e-57 | -8.615850e-47 |
| Msa0827520 | Msa1086350 | 0.822850 | 1.900139e-53 | -8.615850e-47 |
| Msa0827520 | Msa1086490 | 0.825395 | 4.798166e-54 | -8.615850e-47 |
| Msa0827520 | Msa1086510 | 0.840009 | 1.125208e-57 | -8.615850e-47 |
| Msa0827520 | Msa1086670 | 0.826517 | 2.597465e-54 | -8.615850e-47 |
| Msa0827520 | Msa1086680 | 0.817598 | 3.035601e-52 | -8.615850e-47 |
| Msa0827520 | Msa1086840 | 0.819424 | 1.170179e-52 | -8.615850e-47 |
| Msa0827520 | Msa1128610 | 0.831408 | 1.698037e-55 | -8.615850e-47 |
| Msa0827520 | Msa1129300 | 0.843358 | 1.472215e-58 | -8.615850e-47 |
| Msa0827520 | Msa1132900 | 0.814527 | 1.472093e-51 | -8.615850e-47 |
| Msa0827520 | Msa1206400 | 0.813775 | 2.157350e-51 | -8.615850e-47 |
| Msa0827520 | Msa1206450 | 0.812945 | 3.283012e-51 | -8.615850e-47 |
| Msa0827520 | Msa1258030 | 0.815275 | 1.004691e-51 | -8.615850e-47 |
| Msa0827520 | Msa1273620 | 0.808186 | 3.504936e-50 | -8.615850e-47 |
| Msa0827520 | Msa1311600 | 0.801481 | 8.823097e-49 | -8.615850e-47 |
| Msa0827520 | Msa1329260 | 0.803444 | 3.475830e-49 | -8.615850e-47 |
| Msa0827520 | Msa1330560 | -0.809152 | 2.178752e-50 | -8.615850e-47 |
| Msa0827520 | Msa1333220 | 0.837185 | 6.033906e-57 | -8.615850e-47 |
| Msa0827520 | Msa1342960 | 0.958168 | 4.580535e-116 | -8.615850e-47 |
| Msa0827520 | Msa1354860 | 0.800010 | 1.761605e-48 | -8.615850e-47 |
| Msa0827520 | Msa1355030 | 0.812223 | 4.722682e-51 | -8.615850e-47 |
| Msa0827520 | Msa1361670 | 0.830191 | 3.374160e-55 | -8.615850e-47 |
| Msa0827520 | Msa1364350 | 0.861952 | 7.143667e-64 | -8.615850e-47 |
| Msa0827520 | Msa1365030 | 0.824447 | 8.033085e-54 | -8.615850e-47 |
| Msa0827520 | Msa1367400 | 0.824480 | 7.891819e-54 | -8.615850e-47 |
| Msa0827520 | Msa1372770 | 0.860918 | 1.477049e-63 | -8.615850e-47 |
| Msa0827520 | Msa1375610 | 0.823569 | 1.290768e-53 | -8.615850e-47 |
| Msa0827520 | Msa1376550 | 0.814786 | 1.290518e-51 | -8.615850e-47 |
| Msa0827520 | Msa1382380 | 0.883208 | 5.449494e-71 | -8.615850e-47 |
| Msa0827520 | Msa1383620 | 0.821908 | 3.144194e-53 | -8.615850e-47 |
| Msa0827520 | Msa1388030 | 0.862958 | 3.502935e-64 | -8.615850e-47 |
| Msa0827520 | Msa1394080 | 0.814895 | 1.220254e-51 | -8.615850e-47 |
| Msa0827520 | Msa1394270 | 0.813775 | 2.157851e-51 | -8.615850e-47 |
| Msa0827520 | Msa1410480 | 0.806134 | 9.531552e-50 | -8.615850e-47 |
| Msa0827520 | Msa1428230 | 0.807934 | 3.965612e-50 | -8.615850e-47 |
| Msa0827520 | Msa1431510 | 0.829305 | 5.546413e-55 | -8.615850e-47 |
| Msa0827520 | Msa1457390 | 0.804620 | 1.978964e-49 | -8.615850e-47 |
| Msa0827520 | Msa1462680 | 0.821837 | 3.264648e-53 | -8.615850e-47 |
| Msa0120880 | Msa0827520 | -0.801954 | 7.054616e-49 | -8.615850e-47 |
| Msa0123800 | Msa0827520 | -0.812355 | 4.420757e-51 | -8.615850e-47 |
| Msa0126750 | Msa0827520 | 0.802185 | 6.325320e-49 | -8.615850e-47 |
| Msa0129930 | Msa0827520 | 0.800061 | 1.719495e-48 | -8.615850e-47 |
| Msa0133140 | Msa0827520 | 0.806914 | 6.526516e-50 | -8.615850e-47 |
| Msa0136870 | Msa0827520 | 0.855417 | 6.398795e-62 | -8.615850e-47 |
| Msa0138990 | Msa0827520 | 0.818234 | 2.180241e-52 | -8.615850e-47 |
| Msa0140770 | Msa0827520 | 0.849952 | 2.323454e-60 | -8.615850e-47 |
| Msa0151380 | Msa0827520 | 0.810778 | 9.732703e-51 | -8.615850e-47 |
| Msa0151510 | Msa0827520 | 0.826487 | 2.640604e-54 | -8.615850e-47 |
| Msa0152220 | Msa0827520 | -0.815148 | 1.072201e-51 | -8.615850e-47 |
| Msa0154880 | Msa0827520 | 0.831380 | 1.724906e-55 | -8.615850e-47 |
| Msa0154890 | Msa0827520 | 0.837836 | 4.108554e-57 | -8.615850e-47 |
| Msa0168310 | Msa0827520 | -0.855366 | 6.618684e-62 | -8.615850e-47 |
| Msa0168770 | Msa0827520 | 0.811403 | 7.125878e-51 | -8.615850e-47 |
| Msa0173950 | Msa0827520 | 0.830859 | 2.316547e-55 | -8.615850e-47 |
| Msa0178840 | Msa0827520 | 0.843327 | 1.499814e-58 | -8.615850e-47 |
| Msa0183310 | Msa0827520 | 0.800176 | 1.629655e-48 | -8.615850e-47 |
| Msa0187590 | Msa0827520 | 0.835604 | 1.523071e-56 | -8.615850e-47 |
| Msa0220400 | Msa0827520 | 0.858625 | 7.246596e-63 | -8.615850e-47 |
| Msa0221850 | Msa0827520 | 0.804648 | 1.952671e-49 | -8.615850e-47 |
| Msa0223500 | Msa0827520 | 0.806255 | 8.988832e-50 | -8.615850e-47 |
| Msa0223830 | Msa0827520 | 0.838068 | 3.581852e-57 | -8.615850e-47 |
| Msa0225190 | Msa0827520 | 0.823302 | 1.490165e-53 | -8.615850e-47 |
| Msa0225790 | Msa0827520 | 0.819303 | 1.246537e-52 | -8.615850e-47 |
| Msa0234410 | Msa0827520 | 0.810060 | 1.390786e-50 | -8.615850e-47 |
| Msa0370580 | Msa0827520 | 0.817152 | 3.824216e-52 | -8.615850e-47 |
| Msa0373120 | Msa0827520 | 0.807119 | 5.905326e-50 | -8.615850e-47 |
| Msa0375310 | Msa0827520 | -0.814245 | 1.699207e-51 | -8.615850e-47 |
| Msa0380400 | Msa0827520 | 0.809900 | 1.505388e-50 | -8.615850e-47 |
| Msa0385930 | Msa0827520 | 0.871301 | 7.584558e-67 | -8.615850e-47 |
| Msa0389080 | Msa0827520 | 0.807986 | 3.866502e-50 | -8.615850e-47 |
| Msa0403480 | Msa0827520 | 0.855628 | 5.551483e-62 | -8.615850e-47 |
| Msa0421500 | Msa0827520 | -0.813452 | 2.541483e-51 | -8.615850e-47 |
| Msa0461620 | Msa0827520 | 0.804260 | 2.352446e-49 | -8.615850e-47 |
| Msa0476170 | Msa0827520 | 0.818303 | 2.102925e-52 | -8.615850e-47 |
| Msa0479760 | Msa0827520 | 0.845596 | 3.680752e-59 | -8.615850e-47 |
| Msa0260580 | Msa0827520 | 0.831893 | 1.289516e-55 | -8.615850e-47 |
| Msa0260640 | Msa0827520 | 0.813419 | 2.584290e-51 | -8.615850e-47 |
| Msa0261660 | Msa0827520 | 0.809730 | 1.637652e-50 | -8.615850e-47 |
| Msa0262350 | Msa0827520 | 0.822665 | 2.097953e-53 | -8.615850e-47 |
| Msa0268210 | Msa0827520 | 0.845223 | 4.642512e-59 | -8.615850e-47 |
| Msa0268350 | Msa0827520 | 0.805804 | 1.118479e-49 | -8.615850e-47 |
| Msa0268450 | Msa0827520 | 0.861000 | 1.394468e-63 | -8.615850e-47 |
| Msa0268670 | Msa0827520 | 0.860860 | 1.538033e-63 | -8.615850e-47 |
| Msa0268880 | Msa0827520 | 0.856275 | 3.591827e-62 | -8.615850e-47 |
| Msa0269090 | Msa0827520 | 0.837918 | 3.915300e-57 | -8.615850e-47 |
| Msa0293070 | Msa0827520 | 0.819807 | 9.565953e-53 | -8.615850e-47 |
| Msa0293720 | Msa0827520 | -0.803954 | 2.723626e-49 | -8.615850e-47 |
| Msa0295030 | Msa0827520 | 0.810031 | 1.410744e-50 | -8.615850e-47 |
| Msa0297610 | Msa0827520 | -0.805662 | 1.197972e-49 | -8.615850e-47 |
| Msa0299530 | Msa0827520 | 0.826453 | 2.690345e-54 | -8.615850e-47 |
| Msa0310720 | Msa0827520 | 0.837408 | 5.291008e-57 | -8.615850e-47 |
| Msa0310730 | Msa0827520 | 0.852809 | 3.618949e-61 | -8.615850e-47 |
| Msa0332190 | Msa0827520 | -0.803733 | 3.028293e-49 | -8.615850e-47 |
| Msa0332200 | Msa0827520 | -0.805720 | 1.165085e-49 | -8.615850e-47 |
| Msa0335730 | Msa0827520 | -0.812868 | 3.414489e-51 | -8.615850e-47 |
| Msa0358220 | Msa0827520 | 0.804439 | 2.159041e-49 | -8.615850e-47 |
| Msa0513990 | Msa0827520 | -0.810700 | 1.011831e-50 | -8.615850e-47 |
| Msa0523420 | Msa0827520 | 0.809230 | 2.096822e-50 | -8.615850e-47 |
| Msa0523430 | Msa0827520 | 0.886975 | 2.140868e-72 | -8.615850e-47 |
| Msa0523490 | Msa0827520 | 0.882944 | 6.811307e-71 | -8.615850e-47 |
| Msa0536360 | Msa0827520 | 0.822770 | 1.982476e-53 | -8.615850e-47 |
| Msa0548650 | Msa0827520 | 0.840334 | 9.259155e-58 | -8.615850e-47 |
| Msa0550990 | Msa0827520 | 0.816515 | 5.315438e-52 | -8.615850e-47 |
| Msa0566940 | Msa0827520 | 0.805775 | 1.134080e-49 | -8.615850e-47 |
| Msa0576020 | Msa0827520 | 0.867345 | 1.465387e-65 | -8.615850e-47 |
| Msa0576080 | Msa0827520 | 0.865268 | 6.677786e-65 | -8.615850e-47 |
| Msa0576120 | Msa0827520 | 0.890575 | 8.706940e-74 | -8.615850e-47 |
| Msa0582560 | Msa0827520 | 0.827192 | 1.792007e-54 | -8.615850e-47 |
| Msa0582860 | Msa0827520 | 0.830183 | 3.389731e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0827520 | MtrunA17_Chr4g0037131 | 99.652 | 287 | 1 | 0 | 1 | 287 | 1 | 287 | 0.0 | 588 |
| Msa0827520 | MtrunA17_Chr5g0405731 | 71.685 | 279 | 74 | 1 | 7 | 285 | 6 | 279 | 2.89e-152 | 426 |
| Msa0827520 | MtrunA17_Chr4g0030171 | 64.050 | 242 | 86 | 1 | 6 | 246 | 7 | 248 | 8.45e-111 | 320 |
| Msa0827520 | MtrunA17_Chr3g0124821 | 49.237 | 262 | 106 | 6 | 14 | 248 | 100 | 361 | 7.51e-78 | 241 |
| Msa0827520 | MtrunA17_Chr3g0137751 | 38.017 | 242 | 126 | 7 | 13 | 244 | 87 | 314 | 2.37e-43 | 150 |
| Msa0827520 | MtrunA17_Chr4g0068621 | 29.358 | 218 | 107 | 7 | 75 | 249 | 111 | 324 | 3.99e-16 | 77.4 |
| Msa0827520 | MtrunA17_Chr7g0225221 | 28.226 | 248 | 135 | 8 | 36 | 244 | 60 | 303 | 1.52e-15 | 75.5 |
| Msa0827520 | MtrunA17_Chr4g0072091 | 28.102 | 274 | 142 | 10 | 32 | 258 | 55 | 320 | 8.25e-15 | 73.6 |
| Msa0827520 | MtrunA17_Chr1g0188431 | 29.771 | 262 | 130 | 11 | 23 | 243 | 61 | 309 | 1.18e-14 | 73.2 |
| Msa0827520 | MtrunA17_Chr5g0426581 | 34.911 | 169 | 76 | 5 | 24 | 158 | 109 | 277 | 1.21e-14 | 73.2 |
| Msa0827520 | MtrunA17_Chr4g0053871 | 26.374 | 273 | 150 | 9 | 32 | 260 | 58 | 323 | 6.10e-14 | 70.9 |
| Msa0827520 | MtrunA17_Chr3g0129061 | 26.857 | 175 | 90 | 5 | 103 | 243 | 134 | 304 | 1.50e-12 | 67.0 |
| Msa0827520 | MtrunA17_Chr4g0013181 | 27.344 | 256 | 126 | 9 | 35 | 243 | 93 | 335 | 1.83e-12 | 66.6 |
| Msa0827520 | MtrunA17_Chr7g0254201 | 26.316 | 247 | 140 | 9 | 35 | 244 | 54 | 295 | 3.18e-12 | 65.9 |
| Msa0827520 | MtrunA17_Chr2g0278671 | 30.952 | 168 | 97 | 6 | 9 | 164 | 30 | 190 | 3.84e-12 | 65.9 |
| Msa0827520 | MtrunA17_Chr5g0432331 | 27.344 | 256 | 128 | 9 | 35 | 243 | 90 | 334 | 8.04e-12 | 65.1 |
| Msa0827520 | MtrunA17_Chr3g0106921 | 25.197 | 254 | 133 | 7 | 35 | 242 | 59 | 301 | 1.87e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0827520 | AT4G35000.1 | 78.472 | 288 | 60 | 2 | 1 | 287 | 1 | 287 | 3.03e-160 | 447 |
| Msa0827520 | AT4G35970.1 | 66.431 | 283 | 89 | 2 | 5 | 287 | 3 | 279 | 1.72e-134 | 382 |
| Msa0827520 | AT4G35970.2 | 70.909 | 220 | 63 | 1 | 5 | 224 | 3 | 221 | 5.46e-113 | 325 |
| Msa0827520 | AT3G09640.2 | 62.083 | 240 | 91 | 0 | 7 | 246 | 9 | 248 | 6.15e-107 | 311 |
| Msa0827520 | AT3G09640.1 | 62.083 | 240 | 91 | 0 | 7 | 246 | 9 | 248 | 6.15e-107 | 311 |
| Msa0827520 | AT1G07890.2 | 60.331 | 242 | 95 | 1 | 6 | 246 | 7 | 248 | 5.49e-104 | 303 |
| Msa0827520 | AT1G07890.8 | 60.331 | 242 | 95 | 1 | 6 | 246 | 7 | 248 | 5.49e-104 | 303 |
| Msa0827520 | AT1G07890.4 | 60.331 | 242 | 95 | 1 | 6 | 246 | 7 | 248 | 5.49e-104 | 303 |
| Msa0827520 | AT1G07890.7 | 60.331 | 242 | 95 | 1 | 6 | 246 | 7 | 248 | 5.49e-104 | 303 |
| Msa0827520 | AT1G07890.1 | 60.331 | 242 | 95 | 1 | 6 | 246 | 7 | 248 | 5.49e-104 | 303 |
| Msa0827520 | AT1G07890.3 | 60.331 | 242 | 95 | 1 | 6 | 246 | 7 | 248 | 5.49e-104 | 303 |
| Msa0827520 | AT1G07890.5 | 60.331 | 242 | 95 | 1 | 6 | 246 | 7 | 248 | 5.49e-104 | 303 |
| Msa0827520 | AT1G07890.6 | 59.751 | 241 | 96 | 1 | 6 | 245 | 7 | 247 | 6.06e-103 | 301 |
| Msa0827520 | AT4G08390.2 | 48.047 | 256 | 108 | 4 | 14 | 244 | 106 | 361 | 2.72e-76 | 237 |
| Msa0827520 | AT4G08390.5 | 48.047 | 256 | 108 | 4 | 14 | 244 | 106 | 361 | 2.72e-76 | 237 |
| Msa0827520 | AT4G08390.1 | 48.047 | 256 | 108 | 4 | 14 | 244 | 106 | 361 | 2.72e-76 | 237 |
| Msa0827520 | AT4G08390.3 | 48.047 | 256 | 108 | 4 | 14 | 244 | 105 | 360 | 3.25e-76 | 237 |
| Msa0827520 | AT1G77490.2 | 48.828 | 256 | 106 | 4 | 14 | 244 | 85 | 340 | 1.76e-75 | 236 |
| Msa0827520 | AT1G77490.1 | 48.828 | 256 | 106 | 4 | 14 | 244 | 85 | 340 | 1.91e-75 | 236 |
| Msa0827520 | AT4G08390.4 | 44.141 | 256 | 92 | 5 | 14 | 244 | 106 | 335 | 2.26e-65 | 208 |
| Msa0827520 | AT4G32320.1 | 39.035 | 228 | 118 | 5 | 26 | 244 | 108 | 323 | 1.48e-41 | 146 |
| Msa0827520 | AT2G24800.1 | 32.308 | 195 | 90 | 4 | 90 | 244 | 120 | 312 | 7.51e-18 | 82.4 |
| Msa0827520 | AT4G31760.1 | 31.443 | 194 | 92 | 5 | 90 | 244 | 118 | 309 | 3.74e-17 | 80.5 |
| Msa0827520 | AT3G28200.1 | 30.890 | 191 | 90 | 4 | 90 | 244 | 115 | 299 | 2.19e-16 | 78.2 |
| Msa0827520 | AT4G30170.1 | 27.626 | 257 | 136 | 7 | 32 | 244 | 58 | 308 | 1.38e-15 | 76.3 |
| Msa0827520 | AT4G09010.2 | 35.185 | 162 | 67 | 5 | 33 | 158 | 49 | 208 | 1.44e-15 | 75.5 |
| Msa0827520 | AT4G09010.1 | 29.412 | 272 | 111 | 10 | 33 | 262 | 114 | 346 | 2.96e-15 | 75.5 |
| Msa0827520 | AT4G09010.3 | 29.412 | 272 | 111 | 10 | 33 | 262 | 161 | 393 | 5.47e-15 | 74.7 |
| Msa0827520 | AT5G17820.1 | 26.502 | 283 | 136 | 10 | 11 | 240 | 29 | 292 | 2.14e-14 | 72.4 |
| Msa0827520 | AT5G17820.2 | 26.280 | 293 | 144 | 10 | 1 | 240 | 72 | 345 | 7.06e-14 | 71.6 |
| Msa0827520 | AT5G14130.1 | 26.667 | 255 | 141 | 7 | 32 | 244 | 63 | 313 | 8.59e-14 | 70.9 |
| Msa0827520 | AT5G14130.2 | 26.667 | 255 | 141 | 7 | 32 | 244 | 104 | 354 | 1.40e-13 | 70.5 |
| Msa0827520 | AT4G33420.1 | 32.124 | 193 | 97 | 8 | 81 | 243 | 119 | 307 | 3.40e-13 | 69.3 |
| Msa0827520 | AT4G33420.2 | 32.124 | 193 | 97 | 8 | 81 | 243 | 166 | 354 | 3.97e-13 | 69.3 |
| Msa0827520 | AT4G37530.1 | 26.493 | 268 | 141 | 7 | 33 | 251 | 59 | 319 | 6.45e-13 | 68.6 |
| Msa0827520 | AT1G44970.1 | 26.562 | 256 | 135 | 9 | 35 | 243 | 79 | 328 | 7.02e-13 | 68.6 |
| Msa0827520 | AT1G14550.1 | 26.690 | 281 | 160 | 10 | 4 | 243 | 28 | 303 | 9.48e-13 | 67.8 |
| Msa0827520 | AT4G37520.1 | 26.119 | 268 | 142 | 7 | 33 | 251 | 59 | 319 | 1.48e-12 | 67.4 |
| Msa0827520 | AT2G18980.1 | 27.692 | 260 | 132 | 9 | 32 | 244 | 56 | 306 | 3.85e-12 | 66.2 |
| Msa0827520 | AT1G14540.1 | 25.442 | 283 | 160 | 10 | 4 | 243 | 23 | 297 | 1.16e-11 | 64.7 |
| Msa0827520 | AT4G37530.2 | 34.459 | 148 | 81 | 4 | 33 | 167 | 59 | 203 | 3.96e-11 | 62.8 |
Find 108 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGTTGCAGTTGAGGTTAC+TGG | 0.120093 | 5_3:+68821031 | Msa0827520:CDS |
| TCCAACAGACAGGGCTTTAT+TGG | 0.192934 | 5_3:+68821848 | Msa0827520:CDS |
| GATCTTCAAGAGAAAGTAAA+TGG | 0.217985 | 5_3:-68822944 | None:intergenic |
| CCTTTGTGCTTCCAGCTTGC+GGG | 0.246744 | 5_3:+68821007 | Msa0827520:intron |
| TTGCTACATTCTACATCTAT+TGG | 0.258623 | 5_3:+68822836 | Msa0827520:three_prime_UTR |
| GTTATGATGCTGCTCATAAT+TGG | 0.266600 | 5_3:-68822893 | None:intergenic |
| TCCGTTAACAATGGCGTTCC+CGG | 0.280549 | 5_3:+68818056 | Msa0827520:exon |
| TTGTTAACGGAGTTTGATTT+TGG | 0.281222 | 5_3:-68818044 | None:intergenic |
| TCAACATAACGGCGAAATTC+AGG | 0.286433 | 5_3:-68821876 | None:intergenic |
| TGTCAATATCAGGATACTTT+TGG | 0.287568 | 5_3:+68821797 | Msa0827520:intron |
| CCCACAGTCAACTTTGTTCC+TGG | 0.312965 | 5_3:+68821058 | Msa0827520:CDS |
| GTACTGGCACAAAGCGCTTT+TGG | 0.320365 | 5_3:+68822635 | Msa0827520:CDS |
| TTGATTTGATTTGATTTCAT+TGG | 0.341233 | 5_3:+68817916 | Msa0827520:five_prime_UTR |
| TTGTTGCAGTTGAGGTTACT+GGG | 0.345113 | 5_3:+68821032 | Msa0827520:CDS |
| GGTAAATAATCACCTGATAA+AGG | 0.356498 | 5_3:-68818613 | None:intergenic |
| GAACCCAATACTGCTCGTTA+TGG | 0.374494 | 5_3:-68822768 | None:intergenic |
| AGGTCTGCATATGAGATCTT+AGG | 0.374897 | 5_3:-68818593 | None:intergenic |
| GCACAACATACCCTTCTTCC+AGG | 0.375359 | 5_3:-68821076 | None:intergenic |
| TGATTTGATTTGATTTCATT+GGG | 0.376856 | 5_3:+68817917 | Msa0827520:five_prime_UTR |
| AAAGATATTGTTGCACTGTC+TGG | 0.377559 | 5_3:+68821448 | Msa0827520:CDS |
| CTCATATGCAGACCTTTATC+AGG | 0.378885 | 5_3:+68818601 | Msa0827520:CDS |
| TATCAACCACCCACCCATTC+AGG | 0.385197 | 5_3:+68817942 | Msa0827520:five_prime_UTR |
| TGCTACATTCTACATCTATT+GGG | 0.389003 | 5_3:+68822837 | Msa0827520:three_prime_UTR |
| AACCCAATACTGCTCGTTAT+GGG | 0.400077 | 5_3:-68822767 | None:intergenic |
| CATAAGAAACTTTCAGAGCT+TGG | 0.401756 | 5_3:+68822569 | Msa0827520:CDS |
| ACCGGGAACGCCATTGTTAA+CGG | 0.406768 | 5_3:-68818057 | None:intergenic |
| CCATCAAACCCGGATCTCTC+TGG | 0.411433 | 5_3:-68821575 | None:intergenic |
| TTTGATCTGTTCAGCTCTGT+TGG | 0.414035 | 5_3:+68822727 | Msa0827520:three_prime_UTR |
| ACCATTAGGTCCACCGGTCT+TGG | 0.414832 | 5_3:-68818330 | None:intergenic |
| CCAGAGAGATCCGGGTTTGA+TGG | 0.422800 | 5_3:+68821575 | Msa0827520:CDS |
| TCGTTCCGAATAGAACCATT+AGG | 0.431324 | 5_3:-68818344 | None:intergenic |
| GGCCCATAACGAGCAGTATT+GGG | 0.433144 | 5_3:+68822765 | Msa0827520:three_prime_UTR |
| ATCAGGAAGCCGCCCATCTC+TGG | 0.443990 | 5_3:-68821185 | None:intergenic |
| TCAACTTTGTTCCTGGAAGA+AGG | 0.444361 | 5_3:+68821065 | Msa0827520:CDS |
| AAGATATTGTTGCACTGTCT+GGG | 0.448168 | 5_3:+68821449 | Msa0827520:CDS |
| GGAGCAGTTGCCTTTGAGCT+TGG | 0.449217 | 5_3:-68822599 | None:intergenic |
| TGATTCAGGTGGCACGATGC+TGG | 0.451069 | 5_3:+68818290 | Msa0827520:intron |
| CGACAGGATTATTGATCATC+GGG | 0.451924 | 5_3:-68823070 | None:intergenic |
| ACCAAGACCGGTGGACCTAA+TGG | 0.457462 | 5_3:+68818329 | Msa0827520:CDS |
| TCCAATAAAGCCCTGTCTGT+TGG | 0.463470 | 5_3:-68821849 | None:intergenic |
| GATCCGGGTTTGATGGTCCT+TGG | 0.463478 | 5_3:+68821582 | Msa0827520:CDS |
| GCCAGTACGGTTGCATCCAC+AGG | 0.465545 | 5_3:-68822620 | None:intergenic |
| TACTCTGAGTCTACTACTAC+CGG | 0.469129 | 5_3:-68818075 | None:intergenic |
| AACACACCTTGTTTAGCATC+AGG | 0.470481 | 5_3:-68821202 | None:intergenic |
| GCAAGATCCACGTGTCAGTC+AGG | 0.472466 | 5_3:+68817862 | Msa0827520:five_prime_UTR |
| TGCTTAAACTTCCAACAGAC+AGG | 0.474376 | 5_3:+68821838 | Msa0827520:CDS |
| TTTCTCTTGAAGATCGGAAA+AGG | 0.477637 | 5_3:+68822952 | Msa0827520:three_prime_UTR |
| ATTTACTTTCTCTTGAAGAT+CGG | 0.485075 | 5_3:+68822946 | Msa0827520:three_prime_UTR |
| AGAGCACATCCAGAGAGATC+CGG | 0.490027 | 5_3:+68821566 | Msa0827520:CDS |
| GCCGCTGCAGTGGTGATCCT+CGG | 0.490613 | 5_3:+68822668 | Msa0827520:CDS |
| TCAAAAGTATGTACCAGAGA+TGG | 0.493165 | 5_3:+68821172 | Msa0827520:CDS |
| TCCTGTGGATGCAACCGTAC+TGG | 0.493313 | 5_3:+68822619 | Msa0827520:CDS |
| GTGGACCTAATGGTTCTATT+CGG | 0.494846 | 5_3:+68818339 | Msa0827520:CDS |
| TGGCCCATAACGAGCAGTAT+TGG | 0.498931 | 5_3:+68822764 | Msa0827520:three_prime_UTR |
| CTCAAAGGCAACTGCTCCTG+TGG | 0.511925 | 5_3:+68822604 | Msa0827520:CDS |
| GATACTAAGAAAACATAGAC+TGG | 0.514576 | 5_3:-68822803 | None:intergenic |
| GAGCACATCCAGAGAGATCC+GGG | 0.520069 | 5_3:+68821567 | Msa0827520:CDS |
| AGTGGTAGTGAATGCCTGAA+TGG | 0.523106 | 5_3:-68817956 | None:intergenic |
| TGCGGGTGTTGTTGCAGTTG+AGG | 0.524490 | 5_3:+68821024 | Msa0827520:CDS |
| TTGTATGAAACTCACAAAAG+AGG | 0.531958 | 5_3:+68822695 | Msa0827520:CDS |
| TTCTGTTGGCGATGAGAGCA+CGG | 0.540281 | 5_3:-68818131 | None:intergenic |
| ATCTTCAAGAGAAAGTAAAT+GGG | 0.544266 | 5_3:-68822943 | None:intergenic |
| CAACTTTGTTCCTGGAAGAA+GGG | 0.545120 | 5_3:+68821066 | Msa0827520:CDS |
| GTTTGATGGTCCTTGGACAG+AGG | 0.549551 | 5_3:+68821589 | Msa0827520:CDS |
| CAAAAGTATGTACCAGAGAT+GGG | 0.549843 | 5_3:+68821173 | Msa0827520:CDS |
| TGTATGAAACTCACAAAAGA+GGG | 0.552331 | 5_3:+68822696 | Msa0827520:CDS |
| TTCAGAGGGTCCTCTGTCCA+AGG | 0.554982 | 5_3:-68821599 | None:intergenic |
| GAGGGGAGCACAGTTTCTGT+TGG | 0.557155 | 5_3:-68818145 | None:intergenic |
| TATGAGTTATCAAACTTCAG+AGG | 0.559558 | 5_3:-68821614 | None:intergenic |
| TGGCTTTGCACCAAGCTCAA+AGG | 0.560692 | 5_3:+68822589 | Msa0827520:CDS |
| ACGACAGGATTATTGATCAT+CGG | 0.568417 | 5_3:-68823071 | None:intergenic |
| AAAAGCGCTTTGTGCCAGTA+CGG | 0.571570 | 5_3:-68822633 | None:intergenic |
| CGGCTTCCTGATGCTAAACA+AGG | 0.575592 | 5_3:+68821196 | Msa0827520:CDS |
| TATGATGCAAAGACCAAGAC+CGG | 0.589691 | 5_3:+68818317 | Msa0827520:CDS |
| TAGTGAATGCCTGAATGGGT+GGG | 0.590930 | 5_3:-68817951 | None:intergenic |
| AATAGAACCATTAGGTCCAC+CGG | 0.593542 | 5_3:-68818336 | None:intergenic |
| GTGGTAGTGAATGCCTGAAT+GGG | 0.595271 | 5_3:-68817955 | None:intergenic |
| TACGCTAAGCGAAGCATGAG+GGG | 0.595394 | 5_3:-68818162 | None:intergenic |
| ATGAGTTATCAAACTTCAGA+GGG | 0.599283 | 5_3:-68821613 | None:intergenic |
| CTCTTCACCTGACTGACACG+TGG | 0.599612 | 5_3:-68817869 | None:intergenic |
| CTCTTGAAGATCGGAAAAGG+AGG | 0.601669 | 5_3:+68822955 | Msa0827520:three_prime_UTR |
| TTATGTCACAGAGGAAGTGA+AGG | 0.604368 | 5_3:+68818562 | Msa0827520:intron |
| ACTGTCTGGGGCACATACGC+TGG | 0.608033 | 5_3:+68821462 | Msa0827520:CDS |
| CCATACGATAAAAGATATCA+CGG | 0.612766 | 5_3:-68821414 | None:intergenic |
| TCGCATACAGCTCAACATAA+CGG | 0.615688 | 5_3:-68821887 | None:intergenic |
| AGTAGACTCAGAGTATCTCA+AGG | 0.616880 | 5_3:+68818083 | Msa0827520:CDS |
| TGGAAATGGAAATGGATAAG+TGG | 0.624527 | 5_3:-68817974 | None:intergenic |
| TGTCCAAGGACCATCAAACC+CGG | 0.624885 | 5_3:-68821585 | None:intergenic |
| CCAGGAACAAAGTTGACTGT+GGG | 0.625811 | 5_3:-68821058 | None:intergenic |
| TTACGCTAAGCGAAGCATGA+GGG | 0.626450 | 5_3:-68818163 | None:intergenic |
| ACCGAGGATCACCACTGCAG+CGG | 0.626779 | 5_3:-68822669 | None:intergenic |
| TCCAGGAACAAAGTTGACTG+TGG | 0.628167 | 5_3:-68821059 | None:intergenic |
| AAATCAAACTCCGTTAACAA+TGG | 0.629297 | 5_3:+68818047 | Msa0827520:exon |
| GTAGTGAATGCCTGAATGGG+TGG | 0.632785 | 5_3:-68817952 | None:intergenic |
| AGATATTGTTGCACTGTCTG+GGG | 0.639389 | 5_3:+68821450 | Msa0827520:CDS |
| TTATGTTGAGCTGTATGCGA+AGG | 0.641815 | 5_3:+68821890 | Msa0827520:CDS |
| TGTTGCAGTTGAGGTTACTG+GGG | 0.642422 | 5_3:+68821033 | Msa0827520:CDS |
| TGAATGCCTGAATGGGTGGG+TGG | 0.647149 | 5_3:-68817948 | None:intergenic |
| CTTACGCTAAGCGAAGCATG+AGG | 0.649786 | 5_3:-68818164 | None:intergenic |
| AGTTGTAGCTGCCGCTGCAG+TGG | 0.652303 | 5_3:+68822658 | Msa0827520:CDS |
| GCTTAAACTTCCAACAGACA+GGG | 0.655046 | 5_3:+68821839 | Msa0827520:CDS |
| GTTGCAGTTGAGGTTACTGG+GGG | 0.656351 | 5_3:+68821034 | Msa0827520:CDS |
| TGTTGGATGTCACGTCTGTG+TGG | 0.663043 | 5_3:+68822744 | Msa0827520:three_prime_UTR |
| ACTCTGAGTCTACTACTACC+GGG | 0.677019 | 5_3:-68818074 | None:intergenic |
| TAATGGTTCTATTCGGAACG+AGG | 0.677025 | 5_3:+68818346 | Msa0827520:CDS |
| GAGTTTCATACAAGTAACCG+AGG | 0.700364 | 5_3:-68822685 | None:intergenic |
| GATGCAAAGACCAAGACCGG+TGG | 0.716515 | 5_3:+68818320 | Msa0827520:CDS |
| AAGTATGTACCAGAGATGGG+CGG | 0.726843 | 5_3:+68821176 | Msa0827520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAAAATAAAATATT+GGG | - | chr5_3:68821724-68821743 | None:intergenic | 0.0% |
| !! | AAAAAATAAAAATAAAATAT+TGG | - | chr5_3:68821725-68821744 | None:intergenic | 0.0% |
| !!! | TTATTTTTTAATTTTTATTT+TGG | + | chr5_3:68821736-68821755 | Msa0827520:intron | 0.0% |
| !! | AATTATTATAGTTAATAGTT+CGG | - | chr5_3:68819041-68819060 | None:intergenic | 10.0% |
| !! | TATTAACTATAATAATTGAA+TGG | + | chr5_3:68819044-68819063 | Msa0827520:intron | 10.0% |
| !!! | AATATTTTTATGATTTTTTG+GGG | - | chr5_3:68819826-68819845 | None:intergenic | 10.0% |
| !!! | GAATATTTTTATGATTTTTT+GGG | - | chr5_3:68819825-68819844 | None:intergenic | 10.0% |
| !!! | TGAATATTTTTATGATTTTT+TGG | - | chr5_3:68819824-68819843 | None:intergenic | 10.0% |
| !!! | AGATTTTTTTTAAATAATTC+TGG | + | chr5_3:68819333-68819352 | Msa0827520:intron | 10.0% |
| !!! | AAAATTAATCTTTAAAAATC+TGG | + | chr5_3:68819360-68819379 | Msa0827520:intron | 10.0% |
| !!! | GATTTTTTTTTTAAAAATTC+TGG | + | chr5_3:68819406-68819425 | Msa0827520:intron | 10.0% |
| !!! | AAAAGTAAATTTTGTATATT+TGG | + | chr5_3:68819559-68819578 | Msa0827520:intron | 10.0% |
| !!! | AAATTTAATTTTGAAAAATC+TGG | - | chr5_3:68819664-68819683 | None:intergenic | 10.0% |
| !!! | AGATTTTTTTAAAAAAATTC+TGG | - | chr5_3:68819691-68819710 | None:intergenic | 10.0% |
| !!! | TTTCGATTTTTTAAATTTTT+TGG | + | chr5_3:68819793-68819812 | Msa0827520:intron | 10.0% |
| !!! | TGAATATTTTTATGATTTTT+TGG | + | chr5_3:68819824-68819843 | Msa0827520:intron | 10.0% |
| !!! | GAATATTTTTATGATTTTTT+GGG | + | chr5_3:68819825-68819844 | Msa0827520:intron | 10.0% |
| !!! | AATATTTTTATGATTTTTTG+GGG | + | chr5_3:68819826-68819845 | Msa0827520:intron | 10.0% |
| !! | AATAATAAAAAGATATAGAA+AGG | - | chr5_3:68821495-68821514 | None:intergenic | 10.0% |
| !! | GAAAATAAAATAAGAATTTA+TGG | - | chr5_3:68821532-68821551 | None:intergenic | 10.0% |
| !! | TGAATATCATATAATATCAT+TGG | + | chr5_3:68818511-68818530 | Msa0827520:intron | 15.0% |
| !!! | TATATCCAGATTTTAAAAAA+AGG | + | chr5_3:68819308-68819327 | Msa0827520:intron | 15.0% |
| !!! | TGGATACAAATTTTAAAAAA+AGG | + | chr5_3:68819380-68819399 | Msa0827520:intron | 15.0% |
| !!! | TGGATACAAATTTTAAAAAT+AGG | + | chr5_3:68819453-68819472 | Msa0827520:intron | 15.0% |
| !! | TTTCAAAATACAAAAAAATC+TGG | + | chr5_3:68819499-68819518 | Msa0827520:intron | 15.0% |
| !!! | TTTGTATTCAGATTTTTAAA+AGG | - | chr5_3:68819597-68819616 | None:intergenic | 15.0% |
| !!! | TGGATACAAATTTTAAAAAA+AGG | - | chr5_3:68819380-68819399 | None:intergenic | 15.0% |
| !!! | CAGATTTTTTTTTTAAATTC+TGG | - | chr5_3:68819745-68819764 | None:intergenic | 15.0% |
| !!! | TGTTATTTTAGTATTCAATT+AGG | - | chr5_3:68819960-68819979 | None:intergenic | 15.0% |
| !! | TACTATATATGAAAATCAAA+CGG | - | chr5_3:68820705-68820724 | None:intergenic | 15.0% |
| !!! | AGATTCATTTAATTTAATGA+TGG | - | chr5_3:68822460-68822479 | None:intergenic | 15.0% |
| !!! | TTGATTTGATTTGATTTCAT+TGG | + | chr5_3:68817916-68817935 | Msa0827520:five_prime_UTR | 20.0% |
| !!! | TGATTTGATTTGATTTCATT+GGG | + | chr5_3:68817917-68817936 | Msa0827520:five_prime_UTR | 20.0% |
| !! | ATTATATTATGCCTTGAATT+AGG | + | chr5_3:68820223-68820242 | Msa0827520:intron | 20.0% |
| !! | TTTCATAACTATCGAAATTT+AGG | - | chr5_3:68820570-68820589 | None:intergenic | 20.0% |
| !! | ACATATAAAGTGATTAAATC+CGG | + | chr5_3:68820837-68820856 | Msa0827520:intron | 20.0% |
| !! | ATAACTAATATTGTAACGAA+AGG | - | chr5_3:68821106-68821125 | None:intergenic | 20.0% |
| !!! | ATTTTATTTTCTGTGTTTCA+AGG | + | chr5_3:68821541-68821560 | Msa0827520:intron | 20.0% |
| !!! | TTTTATTTTCTGTGTTTCAA+GGG | + | chr5_3:68821542-68821561 | Msa0827520:intron | 20.0% |
| !! | ATATTGACAAAGATATTTAG+CGG | - | chr5_3:68821786-68821805 | None:intergenic | 20.0% |
| !! | TAAATATCTTTGTCAATATC+AGG | + | chr5_3:68821787-68821806 | Msa0827520:intron | 20.0% |
| !!! | TTTTTAGCAAAACAGAAAAT+TGG | - | chr5_3:68822381-68822400 | None:intergenic | 20.0% |
| !! | ATTTTGTATGGAAATGGAAA+TGG | - | chr5_3:68817985-68818004 | None:intergenic | 25.0% |
| !!! | AAGAAAGCTATTGATTTTTG+CGG | + | chr5_3:68818401-68818420 | Msa0827520:CDS | 25.0% |
| ! | TTACAACAACAAAAAAGTGA+AGG | - | chr5_3:68818483-68818502 | None:intergenic | 25.0% |
| ! | AAACAAGAAAACTCTTAGAA+AGG | - | chr5_3:68818540-68818559 | None:intergenic | 25.0% |
| ! | TGAAACTGAATCTCATTATT+AGG | + | chr5_3:68818915-68818934 | Msa0827520:intron | 25.0% |
| !!! | TCTGACCTTTTTTTAAAATC+TGG | - | chr5_3:68819316-68819335 | None:intergenic | 25.0% |
| ! | TAGAAGACAATTTCTTAAAG+AGG | - | chr5_3:68820089-68820108 | None:intergenic | 25.0% |
| ! | TGTTCTATTCAATCATTTAC+AGG | + | chr5_3:68820131-68820150 | Msa0827520:intron | 25.0% |
| ! | GAAATAAAGAGTTCAGAAAA+TGG | - | chr5_3:68820317-68820336 | None:intergenic | 25.0% |
| !! | AAAATTTGTTTAAGGGAACA+AGG | - | chr5_3:68820408-68820427 | None:intergenic | 25.0% |
| !! | TTGTTCCCTTAAACAAATTT+TGG | + | chr5_3:68820407-68820426 | Msa0827520:intron | 25.0% |
| ! | TGAAATAGAACTACATTTCT+TGG | + | chr5_3:68820508-68820527 | Msa0827520:intron | 25.0% |
| ! | GACACTTACAAAGTAATTAA+GGG | - | chr5_3:68820778-68820797 | None:intergenic | 25.0% |
| ! | AGACACTTACAAAGTAATTA+AGG | - | chr5_3:68820779-68820798 | None:intergenic | 25.0% |
| ! | AATTATTTATCACTCATGCA+GGG | + | chr5_3:68820889-68820908 | Msa0827520:intron | 25.0% |
| !!! | TGCATATCTTGTTTTATACA+AGG | - | chr5_3:68820919-68820938 | None:intergenic | 25.0% |
| !! | TGTTTCTAAATTATTGTCAG+TGG | + | chr5_3:68821221-68821240 | Msa0827520:intron | 25.0% |
| !! | CTTAATTTTGTTGATGTGTA+GGG | - | chr5_3:68821322-68821341 | None:intergenic | 25.0% |
| !! | TCTTAATTTTGTTGATGTGT+AGG | - | chr5_3:68821323-68821342 | None:intergenic | 25.0% |
| ! | TATAAACATGTCAATGCTAT+TGG | + | chr5_3:68821375-68821394 | Msa0827520:intron | 25.0% |
| !!! | AATTTTTTTGCTTTACTACG+AGG | + | chr5_3:68821672-68821691 | Msa0827520:intron | 25.0% |
| ! | ATGGACTTATAAAATGCTAT+TGG | - | chr5_3:68822001-68822020 | None:intergenic | 25.0% |
| !! | TATTGGATCAATCTTTTGAT+TGG | + | chr5_3:68822043-68822062 | Msa0827520:intron | 25.0% |
| ! | ATATTAAGTAAGAAAGCTGT+TGG | - | chr5_3:68822201-68822220 | None:intergenic | 25.0% |
| ! | TCCTTATGTTACAACTATTA+AGG | + | chr5_3:68822277-68822296 | Msa0827520:intron | 25.0% |
| ! | ACCTTAATAGTTGTAACATA+AGG | - | chr5_3:68822281-68822300 | None:intergenic | 25.0% |
| !! | AAAATTGGCATGAATGTTTT+GGG | - | chr5_3:68822366-68822385 | None:intergenic | 25.0% |
| ! | TAATCGAAGAAAATCAATAG+TGG | + | chr5_3:68822402-68822421 | Msa0827520:intron | 25.0% |
| ! | ATCTTCAAGAGAAAGTAAAT+GGG | - | chr5_3:68822946-68822965 | None:intergenic | 25.0% |
| ! | ATTTACTTTCTCTTGAAGAT+CGG | + | chr5_3:68822946-68822965 | Msa0827520:three_prime_UTR | 25.0% |
| ! | AGTGAGATTTTGTATGGAAA+TGG | - | chr5_3:68817991-68818010 | None:intergenic | 30.0% |
| !! | TTGTTAACGGAGTTTGATTT+TGG | - | chr5_3:68818047-68818066 | None:intergenic | 30.0% |
| AAATCAAACTCCGTTAACAA+TGG | + | chr5_3:68818047-68818066 | Msa0827520:exon | 30.0% | |
| TCTTACGTTCGTTAATTTCA+CGG | + | chr5_3:68818243-68818262 | Msa0827520:intron | 30.0% | |
| ! | CGATTTTGTTAATCTGATTC+AGG | + | chr5_3:68818276-68818295 | Msa0827520:intron | 30.0% |
| ! | TTTTGTTAATCTGATTCAGG+TGG | + | chr5_3:68818279-68818298 | Msa0827520:intron | 30.0% |
| !! | TTTTCTCATGGTGCTAATAA+TGG | + | chr5_3:68818374-68818393 | Msa0827520:CDS | 30.0% |
| GGTAAATAATCACCTGATAA+AGG | - | chr5_3:68818616-68818635 | None:intergenic | 30.0% | |
| TTTACATAACAAGTGAGTGA+AGG | - | chr5_3:68818637-68818656 | None:intergenic | 30.0% | |
| GCACTTGAACACAAAATTAT+TGG | - | chr5_3:68818672-68818691 | None:intergenic | 30.0% | |
| ! | TTTTGCTAGAAGTTGTAGAA+TGG | + | chr5_3:68818692-68818711 | Msa0827520:intron | 30.0% |
| TTTGCTAGAAGTTGTAGAAT+GGG | + | chr5_3:68818693-68818712 | Msa0827520:intron | 30.0% | |
| ACAAACAATGTAGCAGAAAT+AGG | - | chr5_3:68818801-68818820 | None:intergenic | 30.0% | |
| AACTGAATCTCATTATTAGG+TGG | + | chr5_3:68818918-68818937 | Msa0827520:intron | 30.0% | |
| TCTTCTACCCAAAGAAAAAA+AGG | + | chr5_3:68820102-68820121 | Msa0827520:intron | 30.0% | |
| CTTCTACCCAAAGAAAAAAA+GGG | + | chr5_3:68820103-68820122 | Msa0827520:intron | 30.0% | |
| !!! | AACCATCCCTTTTTTTCTTT+GGG | - | chr5_3:68820112-68820131 | None:intergenic | 30.0% |
| TATTCAATCATTTACAGGCT+TGG | + | chr5_3:68820136-68820155 | Msa0827520:intron | 30.0% | |
| ! | ACACAAAGTATTACAGCATT+AGG | - | chr5_3:68820170-68820189 | None:intergenic | 30.0% |
| TTATGCCTTGAATTAGGATA+AGG | + | chr5_3:68820229-68820248 | Msa0827520:intron | 30.0% | |
| TATGCCTTGAATTAGGATAA+GGG | + | chr5_3:68820230-68820249 | Msa0827520:intron | 30.0% | |
| TTCTGTGATAAACCATTTGA+AGG | + | chr5_3:68820258-68820277 | Msa0827520:intron | 30.0% | |
| TCTGTGATAAACCATTTGAA+GGG | + | chr5_3:68820259-68820278 | Msa0827520:intron | 30.0% | |
| ! | CGTTGCCAAAATTTGTTTAA+GGG | - | chr5_3:68820415-68820434 | None:intergenic | 30.0% |
| ! | ACGTTGCCAAAATTTGTTTA+AGG | - | chr5_3:68820416-68820435 | None:intergenic | 30.0% |
| TTACATGTATCCAAACTTAG+TGG | + | chr5_3:68820652-68820671 | Msa0827520:intron | 30.0% | |
| CTCTCTATTTCAATATGTAC+CGG | - | chr5_3:68820859-68820878 | None:intergenic | 30.0% | |
| ACATATTGAAATAGAGAGGA+AGG | + | chr5_3:68820861-68820880 | Msa0827520:intron | 30.0% | |
| GAATTATTTATCACTCATGC+AGG | + | chr5_3:68820888-68820907 | Msa0827520:intron | 30.0% | |
| AATTAGAGAATGACAAGTTC+AGG | - | chr5_3:68821134-68821153 | None:intergenic | 30.0% | |
| ! | TCTAATTTTCTGTGTCATGT+AGG | + | chr5_3:68821147-68821166 | Msa0827520:intron | 30.0% |
| AGAAAAGAAAATCCTTTCAC+AGG | - | chr5_3:68821292-68821311 | None:intergenic | 30.0% | |
| CCATACGATAAAAGATATCA+CGG | - | chr5_3:68821417-68821436 | None:intergenic | 30.0% | |
| ! | CGTGATATCTTTTATCGTAT+GGG | + | chr5_3:68821415-68821434 | Msa0827520:CDS | 30.0% |
| !! | TTTATTATTTGCTGTGATCG+CGG | + | chr5_3:68821506-68821525 | Msa0827520:intron | 30.0% |
| ATGAGTTATCAAACTTCAGA+GGG | - | chr5_3:68821616-68821635 | None:intergenic | 30.0% | |
| TATGAGTTATCAAACTTCAG+AGG | - | chr5_3:68821617-68821636 | None:intergenic | 30.0% | |
| ! | TGTCAATATCAGGATACTTT+TGG | + | chr5_3:68821797-68821816 | Msa0827520:intron | 30.0% |
| ! | TATGAAATCAGTTTTCAGCA+GGG | - | chr5_3:68821954-68821973 | None:intergenic | 30.0% |
| ! | TTATGAAATCAGTTTTCAGC+AGG | - | chr5_3:68821955-68821974 | None:intergenic | 30.0% |
| ! | ATAAAGTGTTCTGCCAAATA+TGG | + | chr5_3:68821971-68821990 | Msa0827520:intron | 30.0% |
| ! | TAAAGTGTTCTGCCAAATAT+GGG | + | chr5_3:68821972-68821991 | Msa0827520:intron | 30.0% |
| ! | AAATGCAACAAGAGTACAAA+TGG | - | chr5_3:68822020-68822039 | None:intergenic | 30.0% |
| CTCTTGTTGCATTTGTTTAT+TGG | + | chr5_3:68822026-68822045 | Msa0827520:intron | 30.0% | |
| !! | CATTAAGTAGGTTGATTAGT+AGG | + | chr5_3:68822075-68822094 | Msa0827520:intron | 30.0% |
| ATTTCCTACATGTGCTAATT+GGG | + | chr5_3:68822167-68822186 | Msa0827520:intron | 30.0% | |
| ! | GAAAATTGGCATGAATGTTT+TGG | - | chr5_3:68822367-68822386 | None:intergenic | 30.0% |
| TTGTATGAAACTCACAAAAG+AGG | + | chr5_3:68822695-68822714 | Msa0827520:CDS | 30.0% | |
| TGTATGAAACTCACAAAAGA+GGG | + | chr5_3:68822696-68822715 | Msa0827520:CDS | 30.0% | |
| GATACTAAGAAAACATAGAC+TGG | - | chr5_3:68822806-68822825 | None:intergenic | 30.0% | |
| TTGCTACATTCTACATCTAT+TGG | + | chr5_3:68822836-68822855 | Msa0827520:three_prime_UTR | 30.0% | |
| TGCTACATTCTACATCTATT+GGG | + | chr5_3:68822837-68822856 | Msa0827520:three_prime_UTR | 30.0% | |
| GATCTTCAAGAGAAAGTAAA+TGG | - | chr5_3:68822947-68822966 | None:intergenic | 30.0% | |
| TGGAAATGGAAATGGATAAG+TGG | - | chr5_3:68817977-68817996 | None:intergenic | 35.0% | |
| ! | AGTGAGAGTGAGATTTTGTA+TGG | - | chr5_3:68817997-68818016 | None:intergenic | 35.0% |
| !! | TTAACGGAGTTTGATTTTGG+TGG | - | chr5_3:68818044-68818063 | None:intergenic | 35.0% |
| ! | TTTTTCCTTCCTTCCGATTT+CGG | + | chr5_3:68818218-68818237 | Msa0827520:intron | 35.0% |
| !! | CTTGTTTTCTTATGTCACAG+AGG | + | chr5_3:68818553-68818572 | Msa0827520:intron | 35.0% |
| TTGCTAGAAGTTGTAGAATG+GGG | + | chr5_3:68818694-68818713 | Msa0827520:intron | 35.0% | |
| ! | AATCGCTCGTTTGAAACAAT+GGG | - | chr5_3:68819884-68819903 | None:intergenic | 35.0% |
| ! | AAATCGCTCGTTTGAAACAA+TGG | - | chr5_3:68819883-68819902 | None:intergenic | 35.0% |
| ! | AATCGCTCGTTTGAAACAAT+GGG | - | chr5_3:68819884-68819903 | None:intergenic | 35.0% |
| ! | AAATCGCTCGTTTGAAACAA+TGG | - | chr5_3:68819883-68819902 | None:intergenic | 35.0% |
| CGCACAATTGGCAAAATATA+GGG | - | chr5_3:68819916-68819935 | None:intergenic | 35.0% | |
| TCGCACAATTGGCAAAATAT+AGG | - | chr5_3:68819915-68819934 | None:intergenic | 35.0% | |
| AATCAGAAAGGGGAAAACTA+TGG | + | chr5_3:68819854-68819873 | Msa0827520:intron | 35.0% | |
| ATCAGAAAGGGGAAAACTAT+GGG | + | chr5_3:68819855-68819874 | Msa0827520:intron | 35.0% | |
| ! | AAATCGCTCGTTTGAAACAA+TGG | + | chr5_3:68819883-68819902 | Msa0827520:intron | 35.0% |
| ! | AATCGCTCGTTTGAAACAAT+GGG | + | chr5_3:68819884-68819903 | Msa0827520:intron | 35.0% |
| TCGCACAATTGGCAAAATAT+AGG | + | chr5_3:68819915-68819934 | Msa0827520:intron | 35.0% | |
| CGCACAATTGGCAAAATATA+GGG | + | chr5_3:68819916-68819935 | Msa0827520:intron | 35.0% | |
| GCACAATTGGCAAAATATAG+GGG | + | chr5_3:68819917-68819936 | Msa0827520:intron | 35.0% | |
| CACAATTGGCAAAATATAGG+GGG | + | chr5_3:68819918-68819937 | Msa0827520:intron | 35.0% | |
| AAAGAGGTAAACAAGCACAA+GGG | - | chr5_3:68820073-68820092 | None:intergenic | 35.0% | |
| TAAAGAGGTAAACAAGCACA+AGG | - | chr5_3:68820074-68820093 | None:intergenic | 35.0% | |
| TACCCAAAGAAAAAAAGGGA+TGG | + | chr5_3:68820107-68820126 | Msa0827520:intron | 35.0% | |
| !!! | CAACCATCCCTTTTTTTCTT+TGG | - | chr5_3:68820113-68820132 | None:intergenic | 35.0% |
| ATGCTGTAATACTTTGTGTG+AGG | + | chr5_3:68820171-68820190 | Msa0827520:intron | 35.0% | |
| ATACTTTGTGTGAGGTTTCA+AGG | + | chr5_3:68820179-68820198 | Msa0827520:intron | 35.0% | |
| ! | GGTTTTTGACAAAGTTGTCA+AGG | + | chr5_3:68820200-68820219 | Msa0827520:intron | 35.0% |
| ATGCCTTGAATTAGGATAAG+GGG | + | chr5_3:68820231-68820250 | Msa0827520:intron | 35.0% | |
| AATCCCCTTATCCTAATTCA+AGG | - | chr5_3:68820237-68820256 | None:intergenic | 35.0% | |
| CTGTGATAAACCATTTGAAG+GGG | + | chr5_3:68820260-68820279 | Msa0827520:intron | 35.0% | |
| TGTGATAAACCATTTGAAGG+GGG | + | chr5_3:68820261-68820280 | Msa0827520:intron | 35.0% | |
| !!! | ATTAGTTTTCCCCCTTCAAA+TGG | - | chr5_3:68820273-68820292 | None:intergenic | 35.0% |
| ! | CAGTGTCATTGAAATGATTG+AGG | - | chr5_3:68820443-68820462 | None:intergenic | 35.0% |
| ! | ATCACGTTTTTGCCTAAGAA+AGG | - | chr5_3:68820489-68820508 | None:intergenic | 35.0% |
| !! | CTTGGTAGCTTTATGAAATC+TGG | + | chr5_3:68820526-68820545 | Msa0827520:intron | 35.0% |
| GAGATATTAGCCACTAAGTT+TGG | - | chr5_3:68820665-68820684 | None:intergenic | 35.0% | |
| ATCAGAATCAAGACAGTGAT+CGG | + | chr5_3:68820799-68820818 | Msa0827520:intron | 35.0% | |
| CGGTACATATTGAAATAGAG+AGG | + | chr5_3:68820857-68820876 | Msa0827520:intron | 35.0% | |
| TATTGAAATAGAGAGGAAGG+AGG | + | chr5_3:68820864-68820883 | Msa0827520:intron | 35.0% | |
| ! | TCAAAAGTATGTACCAGAGA+TGG | + | chr5_3:68821172-68821191 | Msa0827520:CDS | 35.0% |
| ! | CAAAAGTATGTACCAGAGAT+GGG | + | chr5_3:68821173-68821192 | Msa0827520:CDS | 35.0% |
| TACAACAGTTTCGTTCACTT+GGG | + | chr5_3:68821244-68821263 | Msa0827520:intron | 35.0% | |
| AACATGTCAATGCTATTGGT+AGG | + | chr5_3:68821379-68821398 | Msa0827520:intron | 35.0% | |
| ! | CCGTGATATCTTTTATCGTA+TGG | + | chr5_3:68821414-68821433 | Msa0827520:CDS | 35.0% |
| AAAGATATTGTTGCACTGTC+TGG | + | chr5_3:68821448-68821467 | Msa0827520:CDS | 35.0% | |
| AAGATATTGTTGCACTGTCT+GGG | + | chr5_3:68821449-68821468 | Msa0827520:CDS | 35.0% | |
| TGCTATTGGAAACCCATATT+TGG | - | chr5_3:68821987-68822006 | None:intergenic | 35.0% | |
| TGGAACTCATTGCATTAAGT+AGG | + | chr5_3:68822063-68822082 | Msa0827520:intron | 35.0% | |
| GATTTCCTACATGTGCTAAT+TGG | + | chr5_3:68822166-68822185 | Msa0827520:intron | 35.0% | |
| AGACCAACGTATTAAGTAGT+TGG | - | chr5_3:68822252-68822271 | None:intergenic | 35.0% | |
| TCTAATTCTAATTCTCCCTC+TGG | + | chr5_3:68822507-68822526 | Msa0827520:intron | 35.0% | |
| CATAAGAAACTTTCAGAGCT+TGG | + | chr5_3:68822569-68822588 | Msa0827520:CDS | 35.0% | |
| GTTATGATGCTGCTCATAAT+TGG | - | chr5_3:68822896-68822915 | None:intergenic | 35.0% | |
| TTTCTCTTGAAGATCGGAAA+AGG | + | chr5_3:68822952-68822971 | Msa0827520:three_prime_UTR | 35.0% | |
| TACTCTGAGTCTACTACTAC+CGG | - | chr5_3:68818078-68818097 | None:intergenic | 40.0% | |
| ! | AGTAGACTCAGAGTATCTCA+AGG | + | chr5_3:68818083-68818102 | Msa0827520:CDS | 40.0% |
| CGGAAGGAAGGAAAAAAACA+AGG | - | chr5_3:68818214-68818233 | None:intergenic | 40.0% | |
| CGAACGTAAGAAACCGAAAT+CGG | - | chr5_3:68818234-68818253 | None:intergenic | 40.0% | |
| TATGATGCAAAGACCAAGAC+CGG | + | chr5_3:68818317-68818336 | Msa0827520:CDS | 40.0% | |
| AATAGAACCATTAGGTCCAC+CGG | - | chr5_3:68818339-68818358 | None:intergenic | 40.0% | |
| ! | GTGGACCTAATGGTTCTATT+CGG | + | chr5_3:68818339-68818358 | Msa0827520:CDS | 40.0% |
| TCGTTCCGAATAGAACCATT+AGG | - | chr5_3:68818347-68818366 | None:intergenic | 40.0% | |
| ! | TAATGGTTCTATTCGGAACG+AGG | + | chr5_3:68818346-68818365 | Msa0827520:CDS | 40.0% |
| ! | AACGAGGAAGAGTTTTCTCA+TGG | + | chr5_3:68818362-68818381 | Msa0827520:CDS | 40.0% |
| TTATGTCACAGAGGAAGTGA+AGG | + | chr5_3:68818562-68818581 | Msa0827520:intron | 40.0% | |
| AGGTCTGCATATGAGATCTT+AGG | - | chr5_3:68818596-68818615 | None:intergenic | 40.0% | |
| CTCATATGCAGACCTTTATC+AGG | + | chr5_3:68818601-68818620 | Msa0827520:CDS | 40.0% | |
| TGCTACATTGTTTGTGACTC+TGG | + | chr5_3:68818806-68818825 | Msa0827520:intron | 40.0% | |
| ACTCTGGACACTCAAAACTT+TGG | + | chr5_3:68818822-68818841 | Msa0827520:intron | 40.0% | |
| CTCTGGACACTCAAAACTTT+GGG | + | chr5_3:68818823-68818842 | Msa0827520:intron | 40.0% | |
| ! | AGGGCACTAATCTAAGCAAA+GGG | - | chr5_3:68818978-68818997 | None:intergenic | 40.0% |
| GAAAGAGCTTGTGTGTAAGA+GGG | - | chr5_3:68818997-68819016 | None:intergenic | 40.0% | |
| TCGGAATTGTCATGCATCAT+GGG | - | chr5_3:68819022-68819041 | None:intergenic | 40.0% | |
| TTCGGAATTGTCATGCATCA+TGG | - | chr5_3:68819023-68819042 | None:intergenic | 40.0% | |
| ! | ATCGCTCGTTTGAAACAATG+GGG | - | chr5_3:68819885-68819904 | None:intergenic | 40.0% |
| ! | ATCGCTCGTTTGAAACAATG+GGG | - | chr5_3:68819885-68819904 | None:intergenic | 40.0% |
| TCAGAATGGGGGAAAACTAT+GGG | - | chr5_3:68819178-68819197 | None:intergenic | 40.0% | |
| ATCAGAATGGGGGAAAACTA+TGG | - | chr5_3:68819179-68819198 | None:intergenic | 40.0% | |
| TTGGGGTGCAAAATCAGAAT+GGG | - | chr5_3:68819191-68819210 | None:intergenic | 40.0% | |
| ! | TTTGGGGTGCAAAATCAGAA+TGG | - | chr5_3:68819842-68819861 | None:intergenic | 40.0% |
| ! | TTTGGGGTGCAAAATCAGAA+AGG | + | chr5_3:68819842-68819861 | Msa0827520:intron | 40.0% |
| TTGGGGTGCAAAATCAGAAA+GGG | + | chr5_3:68819843-68819862 | Msa0827520:intron | 40.0% | |
| TCAGAAAGGGGAAAACTATG+GGG | + | chr5_3:68819856-68819875 | Msa0827520:intron | 40.0% | |
| ! | ATCGCTCGTTTGAAACAATG+GGG | + | chr5_3:68819885-68819904 | Msa0827520:intron | 40.0% |
| GTCATTGAAATGATTGAGGC+AGG | - | chr5_3:68820439-68820458 | None:intergenic | 40.0% | |
| ACTACCAACAAGCCTTTCTT+AGG | + | chr5_3:68820474-68820493 | Msa0827520:intron | 40.0% | |
| TTTGCCTAAGAAAGGCTTGT+TGG | - | chr5_3:68820481-68820500 | None:intergenic | 40.0% | |
| TTGTTGCAGTTGAGGTTACT+GGG | + | chr5_3:68821032-68821051 | Msa0827520:CDS | 40.0% | |
| TCAACTTTGTTCCTGGAAGA+AGG | + | chr5_3:68821065-68821084 | Msa0827520:CDS | 40.0% | |
| CAACTTTGTTCCTGGAAGAA+GGG | + | chr5_3:68821066-68821085 | Msa0827520:CDS | 40.0% | |
| ! | AACACACCTTGTTTAGCATC+AGG | - | chr5_3:68821205-68821224 | None:intergenic | 40.0% |
| GTACAACAGTTTCGTTCACT+TGG | + | chr5_3:68821243-68821262 | Msa0827520:intron | 40.0% | |
| AGATATTGTTGCACTGTCTG+GGG | + | chr5_3:68821450-68821469 | Msa0827520:CDS | 40.0% | |
| TGCTTAAACTTCCAACAGAC+AGG | + | chr5_3:68821838-68821857 | Msa0827520:CDS | 40.0% | |
| GCTTAAACTTCCAACAGACA+GGG | + | chr5_3:68821839-68821858 | Msa0827520:CDS | 40.0% | |
| TCAACATAACGGCGAAATTC+AGG | - | chr5_3:68821879-68821898 | None:intergenic | 40.0% | |
| TCGCATACAGCTCAACATAA+CGG | - | chr5_3:68821890-68821909 | None:intergenic | 40.0% | |
| TTATGTTGAGCTGTATGCGA+AGG | + | chr5_3:68821890-68821909 | Msa0827520:CDS | 40.0% | |
| AGCTGTATGCGAAGGTAATT+GGG | + | chr5_3:68821898-68821917 | Msa0827520:intron | 40.0% | |
| TCCAAAGCACAATGCTTACT+GGG | - | chr5_3:68822106-68822125 | None:intergenic | 40.0% | |
| AACATCGTGATAATCGCAGA+TGG | - | chr5_3:68822140-68822159 | None:intergenic | 40.0% | |
| AGATATGAGCTCTTTCTACC+TGG | + | chr5_3:68822226-68822245 | Msa0827520:intron | 40.0% | |
| AACGTATTAAGTAGTTGGCC+AGG | - | chr5_3:68822247-68822266 | None:intergenic | 40.0% | |
| TGGCCAACTACTTAATACGT+TGG | + | chr5_3:68822246-68822265 | Msa0827520:intron | 40.0% | |
| !! | TTGGCATGAATGTTTTGGGT+AGG | - | chr5_3:68822362-68822381 | None:intergenic | 40.0% |
| GAGTTTCATACAAGTAACCG+AGG | - | chr5_3:68822688-68822707 | None:intergenic | 40.0% | |
| TTTGATCTGTTCAGCTCTGT+TGG | + | chr5_3:68822727-68822746 | Msa0827520:three_prime_UTR | 40.0% | |
| AACCCAATACTGCTCGTTAT+GGG | - | chr5_3:68822770-68822789 | None:intergenic | 40.0% | |
| TAGTGAATGCCTGAATGGGT+GGG | - | chr5_3:68817954-68817973 | None:intergenic | 45.0% | |
| ! | GTGGTAGTGAATGCCTGAAT+GGG | - | chr5_3:68817958-68817977 | None:intergenic | 45.0% |
| ! | AGTGGTAGTGAATGCCTGAA+TGG | - | chr5_3:68817959-68817978 | None:intergenic | 45.0% |
| ACTCTGAGTCTACTACTACC+GGG | - | chr5_3:68818077-68818096 | None:intergenic | 45.0% | |
| TTACGCTAAGCGAAGCATGA+GGG | - | chr5_3:68818166-68818185 | None:intergenic | 45.0% | |
| TCATGCTTCGCTTAGCGTAA+GGG | + | chr5_3:68818166-68818185 | Msa0827520:intron | 45.0% | |
| AGAAACCGAAATCGGAAGGA+AGG | - | chr5_3:68818226-68818245 | None:intergenic | 45.0% | |
| CGTAAGAAACCGAAATCGGA+AGG | - | chr5_3:68818230-68818249 | None:intergenic | 45.0% | |
| ! | GTTTTTCGTGCAGTGTTAGC+TGG | + | chr5_3:68818862-68818881 | Msa0827520:intron | 45.0% |
| !! | GAGGGCACTAATCTAAGCAA+AGG | - | chr5_3:68818979-68818998 | None:intergenic | 45.0% |
| GGAAAGAGCTTGTGTGTAAG+AGG | - | chr5_3:68818998-68819017 | None:intergenic | 45.0% | |
| GAATTGTCATGCATCATGGG+AGG | - | chr5_3:68819019-68819038 | None:intergenic | 45.0% | |
| GGGGTACAAAATCGCACAAT+TGG | - | chr5_3:68819158-68819177 | None:intergenic | 45.0% | |
| CAGAATGGGGGAAAACTATG+GGG | - | chr5_3:68819177-68819196 | None:intergenic | 45.0% | |
| TGGGGTGCAAAATCAGAATG+GGG | - | chr5_3:68819190-68819209 | None:intergenic | 45.0% | |
| TGGGGTGCAAAATCAGAAAG+GGG | + | chr5_3:68819844-68819863 | Msa0827520:intron | 45.0% | |
| !! | GCTTGTTGGTAGTATGAAGC+AGG | - | chr5_3:68820467-68820486 | None:intergenic | 45.0% |
| CATGTAATCTATGACGCAGC+TGG | - | chr5_3:68820962-68820981 | None:intergenic | 45.0% | |
| GTTGTTGCAGTTGAGGTTAC+TGG | + | chr5_3:68821031-68821050 | Msa0827520:CDS | 45.0% | |
| TGTTGCAGTTGAGGTTACTG+GGG | + | chr5_3:68821033-68821052 | Msa0827520:CDS | 45.0% | |
| CCAGGAACAAAGTTGACTGT+GGG | - | chr5_3:68821061-68821080 | None:intergenic | 45.0% | |
| TCCAGGAACAAAGTTGACTG+TGG | - | chr5_3:68821062-68821081 | None:intergenic | 45.0% | |
| AAGTATGTACCAGAGATGGG+CGG | + | chr5_3:68821176-68821195 | Msa0827520:CDS | 45.0% | |
| GAAAATCCTTTCACAGGCAG+TGG | - | chr5_3:68821286-68821305 | None:intergenic | 45.0% | |
| ! | TCCAACAGACAGGGCTTTAT+TGG | + | chr5_3:68821848-68821867 | Msa0827520:CDS | 45.0% |
| TCCAATAAAGCCCTGTCTGT+TGG | - | chr5_3:68821852-68821871 | None:intergenic | 45.0% | |
| GAGCTGTATGCGAAGGTAAT+TGG | + | chr5_3:68821897-68821916 | Msa0827520:intron | 45.0% | |
| AAGCACAATGCTTACTGGGA+AGG | - | chr5_3:68822102-68822121 | None:intergenic | 45.0% | |
| ! | TCCCAGTAAGCATTGTGCTT+TGG | + | chr5_3:68822102-68822121 | Msa0827520:intron | 45.0% |
| CTCCAAAGCACAATGCTTAC+TGG | - | chr5_3:68822107-68822126 | None:intergenic | 45.0% | |
| TCCTACATGTGCTAATTGGG+TGG | + | chr5_3:68822170-68822189 | Msa0827520:intron | 45.0% | |
| TCCACCCAATTAGCACATGT+AGG | - | chr5_3:68822174-68822193 | None:intergenic | 45.0% | |
| ATTCTAATTCTCCCTCTGGC+AGG | + | chr5_3:68822511-68822530 | Msa0827520:intron | 45.0% | |
| !! | AAAAGCGCTTTGTGCCAGTA+CGG | - | chr5_3:68822636-68822655 | None:intergenic | 45.0% |
| GAACCCAATACTGCTCGTTA+TGG | - | chr5_3:68822771-68822790 | None:intergenic | 45.0% | |
| CTCTTGAAGATCGGAAAAGG+AGG | + | chr5_3:68822955-68822974 | Msa0827520:three_prime_UTR | 45.0% | |
| !!! | TTCTAATTTTTTAAATTTTT+TGG | - | chr5_3:68819241-68819260 | None:intergenic | 5.0% |
| !!! | AAATTTAATTTTTAAAAATC+TGG | + | chr5_3:68819433-68819452 | Msa0827520:intron | 5.0% |
| !!! | ATTTTCAAAATTTTAAAAAA+AGG | - | chr5_3:68819716-68819735 | None:intergenic | 5.0% |
| TATCAACCACCCACCCATTC+AGG | + | chr5_3:68817942-68817961 | Msa0827520:five_prime_UTR | 50.0% | |
| GTAGTGAATGCCTGAATGGG+TGG | - | chr5_3:68817955-68817974 | None:intergenic | 50.0% | |
| TCCGTTAACAATGGCGTTCC+CGG | + | chr5_3:68818056-68818075 | Msa0827520:exon | 50.0% | |
| ACCGGGAACGCCATTGTTAA+CGG | - | chr5_3:68818060-68818079 | None:intergenic | 50.0% | |
| TTCTGTTGGCGATGAGAGCA+CGG | - | chr5_3:68818134-68818153 | None:intergenic | 50.0% | |
| TACGCTAAGCGAAGCATGAG+GGG | - | chr5_3:68818165-68818184 | None:intergenic | 50.0% | |
| CTTACGCTAAGCGAAGCATG+AGG | - | chr5_3:68818167-68818186 | None:intergenic | 50.0% | |
| CTCATGCTTCGCTTAGCGTA+AGG | + | chr5_3:68818165-68818184 | Msa0827520:intron | 50.0% | |
| GGGGTGCAAAATCAGAATGG+GGG | - | chr5_3:68819189-68819208 | None:intergenic | 50.0% | |
| GGGGTGCAAAATCGCACAAT+TGG | + | chr5_3:68819904-68819923 | Msa0827520:intron | 50.0% | |
| ! | CAAGCTGGAAGCACAAAGGA+AGG | - | chr5_3:68821006-68821025 | None:intergenic | 50.0% |
| TCCTTTGTGCTTCCAGCTTG+CGG | + | chr5_3:68821006-68821025 | Msa0827520:intron | 50.0% | |
| GTTGCAGTTGAGGTTACTGG+GGG | + | chr5_3:68821034-68821053 | Msa0827520:CDS | 50.0% | |
| CCCACAGTCAACTTTGTTCC+TGG | + | chr5_3:68821058-68821077 | Msa0827520:CDS | 50.0% | |
| GCACAACATACCCTTCTTCC+AGG | - | chr5_3:68821079-68821098 | None:intergenic | 50.0% | |
| CGGCTTCCTGATGCTAAACA+AGG | + | chr5_3:68821196-68821215 | Msa0827520:CDS | 50.0% | |
| CAGTTTCGTTCACTTGGGCA+TGG | + | chr5_3:68821249-68821268 | Msa0827520:intron | 50.0% | |
| AGCTTACCACTGCCTGTGAA+AGG | + | chr5_3:68821277-68821296 | Msa0827520:intron | 50.0% | |
| AGAGCACATCCAGAGAGATC+CGG | + | chr5_3:68821566-68821585 | Msa0827520:CDS | 50.0% | |
| TGTCCAAGGACCATCAAACC+CGG | - | chr5_3:68821588-68821607 | None:intergenic | 50.0% | |
| ! | GTTTGATGGTCCTTGGACAG+AGG | + | chr5_3:68821589-68821608 | Msa0827520:CDS | 50.0% |
| ! | TGGCTTTGCACCAAGCTCAA+AGG | + | chr5_3:68822589-68822608 | Msa0827520:CDS | 50.0% |
| !! | GTACTGGCACAAAGCGCTTT+TGG | + | chr5_3:68822635-68822654 | Msa0827520:CDS | 50.0% |
| TGTTGGATGTCACGTCTGTG+TGG | + | chr5_3:68822744-68822763 | Msa0827520:three_prime_UTR | 50.0% | |
| TGGCCCATAACGAGCAGTAT+TGG | + | chr5_3:68822764-68822783 | Msa0827520:three_prime_UTR | 50.0% | |
| GGCCCATAACGAGCAGTATT+GGG | + | chr5_3:68822765-68822784 | Msa0827520:three_prime_UTR | 50.0% | |
| GCAAGATCCACGTGTCAGTC+AGG | + | chr5_3:68817862-68817881 | Msa0827520:five_prime_UTR | 55.0% | |
| CTCTTCACCTGACTGACACG+TGG | - | chr5_3:68817872-68817891 | None:intergenic | 55.0% | |
| TGAATGCCTGAATGGGTGGG+TGG | - | chr5_3:68817951-68817970 | None:intergenic | 55.0% | |
| ! | GAGGGGAGCACAGTTTCTGT+TGG | - | chr5_3:68818148-68818167 | None:intergenic | 55.0% |
| TGATTCAGGTGGCACGATGC+TGG | + | chr5_3:68818290-68818309 | Msa0827520:intron | 55.0% | |
| GATGCAAAGACCAAGACCGG+TGG | + | chr5_3:68818320-68818339 | Msa0827520:CDS | 55.0% | |
| ACCAAGACCGGTGGACCTAA+TGG | + | chr5_3:68818329-68818348 | Msa0827520:CDS | 55.0% | |
| ACCATTAGGTCCACCGGTCT+TGG | - | chr5_3:68818333-68818352 | None:intergenic | 55.0% | |
| CCTTTGTGCTTCCAGCTTGC+GGG | + | chr5_3:68821007-68821026 | Msa0827520:intron | 55.0% | |
| !! | TGCGGGTGTTGTTGCAGTTG+AGG | + | chr5_3:68821024-68821043 | Msa0827520:CDS | 55.0% |
| GAGCACATCCAGAGAGATCC+GGG | + | chr5_3:68821567-68821586 | Msa0827520:CDS | 55.0% | |
| CCATCAAACCCGGATCTCTC+TGG | - | chr5_3:68821578-68821597 | None:intergenic | 55.0% | |
| CCAGAGAGATCCGGGTTTGA+TGG | + | chr5_3:68821575-68821594 | Msa0827520:CDS | 55.0% | |
| ! | GATCCGGGTTTGATGGTCCT+TGG | + | chr5_3:68821582-68821601 | Msa0827520:CDS | 55.0% |
| TTCAGAGGGTCCTCTGTCCA+AGG | - | chr5_3:68821602-68821621 | None:intergenic | 55.0% | |
| ATTCTCCCTCTGGCAGGATG+AGG | + | chr5_3:68822517-68822536 | Msa0827520:intron | 55.0% | |
| TGCATCCTCATCCTGCCAGA+GGG | - | chr5_3:68822525-68822544 | None:intergenic | 55.0% | |
| ATGCATCCTCATCCTGCCAG+AGG | - | chr5_3:68822526-68822545 | None:intergenic | 55.0% | |
| GGAGCAGTTGCCTTTGAGCT+TGG | - | chr5_3:68822602-68822621 | None:intergenic | 55.0% | |
| CTCAAAGGCAACTGCTCCTG+TGG | + | chr5_3:68822604-68822623 | Msa0827520:CDS | 55.0% | |
| TCCTGTGGATGCAACCGTAC+TGG | + | chr5_3:68822619-68822638 | Msa0827520:CDS | 55.0% | |
| ! | CCCGCAAGCTGGAAGCACAA+AGG | - | chr5_3:68821010-68821029 | None:intergenic | 60.0% |
| CTGCAACAACACCCGCAAGC+TGG | - | chr5_3:68821021-68821040 | None:intergenic | 60.0% | |
| ATCAGGAAGCCGCCCATCTC+TGG | - | chr5_3:68821188-68821207 | None:intergenic | 60.0% | |
| ! | ACTGTCTGGGGCACATACGC+TGG | + | chr5_3:68821462-68821481 | Msa0827520:CDS | 60.0% |
| GCCAGTACGGTTGCATCCAC+AGG | - | chr5_3:68822623-68822642 | None:intergenic | 60.0% | |
| AGTTGTAGCTGCCGCTGCAG+TGG | + | chr5_3:68822658-68822677 | Msa0827520:CDS | 60.0% | |
| ACCGAGGATCACCACTGCAG+CGG | - | chr5_3:68822672-68822691 | None:intergenic | 60.0% | |
| GCCGCTGCAGTGGTGATCCT+CGG | + | chr5_3:68822668-68822687 | Msa0827520:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 68817855 | 68823089 | 68817855 | ID=Msa0827520;Name=Msa0827520 |
| chr5_3 | mRNA | 68817855 | 68823089 | 68817855 | ID=Msa0827520-mRNA-1;Parent=Msa0827520;Name=Msa0827520-mRNA-1;_AED=0.10;_eAED=0.10;_QI=211|1|1|1|1|1|9|365|287 |
| chr5_3 | exon | 68817855 | 68818181 | 68817855 | ID=Msa0827520-mRNA-1:exon:21607;Parent=Msa0827520-mRNA-1 |
| chr5_3 | exon | 68818298 | 68818422 | 68818298 | ID=Msa0827520-mRNA-1:exon:21608;Parent=Msa0827520-mRNA-1 |
| chr5_3 | exon | 68818573 | 68818622 | 68818573 | ID=Msa0827520-mRNA-1:exon:21609;Parent=Msa0827520-mRNA-1 |
| chr5_3 | exon | 68821022 | 68821087 | 68821022 | ID=Msa0827520-mRNA-1:exon:21610;Parent=Msa0827520-mRNA-1 |
| chr5_3 | exon | 68821169 | 68821217 | 68821169 | ID=Msa0827520-mRNA-1:exon:21611;Parent=Msa0827520-mRNA-1 |
| chr5_3 | exon | 68821401 | 68821483 | 68821401 | ID=Msa0827520-mRNA-1:exon:21612;Parent=Msa0827520-mRNA-1 |
| chr5_3 | exon | 68821563 | 68821642 | 68821563 | ID=Msa0827520-mRNA-1:exon:21613;Parent=Msa0827520-mRNA-1 |
| chr5_3 | exon | 68821809 | 68821911 | 68821809 | ID=Msa0827520-mRNA-1:exon:21614;Parent=Msa0827520-mRNA-1 |
| chr5_3 | exon | 68822533 | 68823089 | 68822533 | ID=Msa0827520-mRNA-1:exon:21615;Parent=Msa0827520-mRNA-1 |
| chr5_3 | five_prime_UTR | 68817855 | 68818065 | 68817855 | ID=Msa0827520-mRNA-1:five_prime_utr;Parent=Msa0827520-mRNA-1 |
| chr5_3 | CDS | 68818066 | 68818181 | 68818066 | ID=Msa0827520-mRNA-1:cds;Parent=Msa0827520-mRNA-1 |
| chr5_3 | CDS | 68818298 | 68818422 | 68818298 | ID=Msa0827520-mRNA-1:cds;Parent=Msa0827520-mRNA-1 |
| chr5_3 | CDS | 68818573 | 68818622 | 68818573 | ID=Msa0827520-mRNA-1:cds;Parent=Msa0827520-mRNA-1 |
| chr5_3 | CDS | 68821022 | 68821087 | 68821022 | ID=Msa0827520-mRNA-1:cds;Parent=Msa0827520-mRNA-1 |
| chr5_3 | CDS | 68821169 | 68821217 | 68821169 | ID=Msa0827520-mRNA-1:cds;Parent=Msa0827520-mRNA-1 |
| chr5_3 | CDS | 68821401 | 68821483 | 68821401 | ID=Msa0827520-mRNA-1:cds;Parent=Msa0827520-mRNA-1 |
| chr5_3 | CDS | 68821563 | 68821642 | 68821563 | ID=Msa0827520-mRNA-1:cds;Parent=Msa0827520-mRNA-1 |
| chr5_3 | CDS | 68821809 | 68821911 | 68821809 | ID=Msa0827520-mRNA-1:cds;Parent=Msa0827520-mRNA-1 |
| chr5_3 | CDS | 68822533 | 68822724 | 68822533 | ID=Msa0827520-mRNA-1:cds;Parent=Msa0827520-mRNA-1 |
| chr5_3 | three_prime_UTR | 68822725 | 68823089 | 68822725 | ID=Msa0827520-mRNA-1:three_prime_utr;Parent=Msa0827520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
