Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0686950 | XP_003607199.1 | 99.652 | 287 | 1 | 0 | 1 | 287 | 1 | 287 | 0.0 | 588 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0686950 | sp|Q42564|APX3_ARATH | 78.472 | 288 | 60 | 2 | 1 | 287 | 1 | 287 | 2.99e-159 | 447 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0686950 | G7JNF5 | 99.652 | 287 | 1 | 0 | 1 | 287 | 1 | 287 | 0.0 | 588 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001550 | Msa0686950 | 0.817904 | 2.588865e-52 | -8.615850e-47 |
| Msa0002110 | Msa0686950 | 0.857796 | 1.278607e-62 | -8.615850e-47 |
| Msa0007810 | Msa0686950 | 0.802885 | 4.536955e-49 | -8.615850e-47 |
| Msa0011450 | Msa0686950 | 0.830982 | 2.160545e-55 | -8.615850e-47 |
| Msa0029520 | Msa0686950 | 0.862945 | 3.537607e-64 | -8.615850e-47 |
| Msa0033840 | Msa0686950 | 0.810700 | 1.011865e-50 | -8.615850e-47 |
| Msa0042490 | Msa0686950 | 0.810099 | 1.363946e-50 | -8.615850e-47 |
| Msa0042950 | Msa0686950 | 0.818764 | 1.653126e-52 | -8.615850e-47 |
| Msa0056230 | Msa0686950 | 0.804355 | 2.248255e-49 | -8.615850e-47 |
| Msa0065670 | Msa0686950 | 0.822026 | 2.951799e-53 | -8.615850e-47 |
| Msa0066890 | Msa0686950 | 0.859943 | 2.913985e-63 | -8.615850e-47 |
| Msa0067590 | Msa0686950 | 0.841633 | 4.220576e-58 | -8.615850e-47 |
| Msa0079580 | Msa0686950 | 0.805044 | 1.614468e-49 | -8.615850e-47 |
| Msa0081610 | Msa0686950 | 0.838650 | 2.535661e-57 | -8.615850e-47 |
| Msa0089700 | Msa0686950 | 0.800486 | 1.409350e-48 | -8.615850e-47 |
| Msa0093950 | Msa0686950 | 0.879648 | 1.050024e-69 | -8.615850e-47 |
| Msa0094170 | Msa0686950 | 0.835210 | 1.915779e-56 | -8.615850e-47 |
| Msa0095280 | Msa0686950 | 0.811722 | 6.072499e-51 | -8.615850e-47 |
| Msa0095810 | Msa0686950 | 0.858453 | 8.151400e-63 | -8.615850e-47 |
| Msa0111110 | Msa0686950 | 0.864710 | 9.993455e-65 | -8.615850e-47 |
| Msa0113370 | Msa0686950 | 0.834212 | 3.415714e-56 | -8.615850e-47 |
| Msa0603690 | Msa0686950 | 0.819840 | 9.403081e-53 | -8.615850e-47 |
| Msa0605040 | Msa0686950 | 0.843418 | 1.418513e-58 | -8.615850e-47 |
| Msa0605160 | Msa0686950 | 0.843713 | 1.183217e-58 | -8.615850e-47 |
| Msa0606640 | Msa0686950 | 0.801168 | 1.022472e-48 | -8.615850e-47 |
| Msa0632430 | Msa0686950 | 0.802730 | 4.883739e-49 | -8.615850e-47 |
| Msa0637930 | Msa0686950 | 0.872571 | 2.871934e-67 | -8.615850e-47 |
| Msa0638010 | Msa0686950 | 0.873722 | 1.179835e-67 | -8.615850e-47 |
| Msa0654570 | Msa0686950 | 0.807272 | 5.482329e-50 | -8.615850e-47 |
| Msa0660960 | Msa0686950 | 0.839653 | 1.392804e-57 | -8.615850e-47 |
| Msa0671160 | Msa0686950 | 0.831564 | 1.554153e-55 | -8.615850e-47 |
| Msa0671200 | Msa0686950 | 0.827233 | 1.752085e-54 | -8.615850e-47 |
| Msa0686860 | Msa0686950 | 0.807585 | 4.703806e-50 | -8.615850e-47 |
| Msa0686950 | Msa0742370 | 0.815370 | 9.572639e-52 | -8.615850e-47 |
| Msa0686950 | Msa0779450 | 0.829111 | 6.181058e-55 | -8.615850e-47 |
| Msa0686950 | Msa0788450 | 0.825221 | 5.274640e-54 | -8.615850e-47 |
| Msa0686950 | Msa0796580 | 0.826734 | 2.305771e-54 | -8.615850e-47 |
| Msa0686950 | Msa0822320 | 0.815650 | 8.290885e-52 | -8.615850e-47 |
| Msa0686950 | Msa0823480 | 0.818330 | 2.074125e-52 | -8.615850e-47 |
| Msa0686950 | Msa0825570 | 0.825652 | 4.170702e-54 | -8.615850e-47 |
| Msa0686950 | Msa0826540 | 0.823147 | 1.619705e-53 | -8.615850e-47 |
| Msa0686950 | Msa0827520 | 0.999224 | 5.705954e-297 | -8.615850e-47 |
| Msa0686950 | Msa0829210 | 0.802211 | 6.246436e-49 | -8.615850e-47 |
| Msa0686950 | Msa0833950 | 0.869509 | 2.936011e-66 | -8.615850e-47 |
| Msa0686950 | Msa0862480 | 0.829237 | 5.761256e-55 | -8.615850e-47 |
| Msa0686950 | Msa0864820 | 0.836509 | 8.978152e-57 | -8.615850e-47 |
| Msa0686950 | Msa0881530 | 0.890248 | 1.169201e-73 | -8.615850e-47 |
| Msa0686950 | Msa0919120 | 0.872450 | 3.151637e-67 | -8.615850e-47 |
| Msa0686950 | Msa0925930 | -0.813157 | 2.950466e-51 | -8.615850e-47 |
| Msa0686950 | Msa0931000 | 0.800696 | 1.276935e-48 | -8.615850e-47 |
| Msa0686950 | Msa0979070 | -0.800081 | 1.703352e-48 | -8.615850e-47 |
| Msa0686950 | Msa0982090 | 0.883570 | 4.014038e-71 | -8.615850e-47 |
| Msa0686950 | Msa0983680 | 0.813290 | 2.758619e-51 | -8.615850e-47 |
| Msa0686950 | Msa1039440 | 0.816069 | 6.687284e-52 | -8.615850e-47 |
| Msa0686950 | Msa1067980 | 0.804811 | 1.806066e-49 | -8.615850e-47 |
| Msa0686950 | Msa1083620 | 0.800952 | 1.132237e-48 | -8.615850e-47 |
| Msa0686950 | Msa1084680 | 0.841381 | 4.917403e-58 | -8.615850e-47 |
| Msa0686950 | Msa1085610 | 0.880512 | 5.166456e-70 | -8.615850e-47 |
| Msa0686950 | Msa1086030 | 0.802334 | 5.894092e-49 | -8.615850e-47 |
| Msa0686950 | Msa1086310 | 0.804757 | 1.853378e-49 | -8.615850e-47 |
| Msa0686950 | Msa1086320 | 0.837068 | 6.464628e-57 | -8.615850e-47 |
| Msa0686950 | Msa1086350 | 0.824654 | 7.180481e-54 | -8.615850e-47 |
| Msa0686950 | Msa1086420 | 0.801764 | 7.719562e-49 | -8.615850e-47 |
| Msa0686950 | Msa1086490 | 0.825719 | 4.021422e-54 | -8.615850e-47 |
| Msa0686950 | Msa1086510 | 0.839478 | 1.547295e-57 | -8.615850e-47 |
| Msa0686950 | Msa1086640 | 0.800475 | 1.416531e-48 | -8.615850e-47 |
| Msa0686950 | Msa1086670 | 0.828564 | 8.382892e-55 | -8.615850e-47 |
| Msa0686950 | Msa1086680 | 0.818788 | 1.632913e-52 | -8.615850e-47 |
| Msa0686950 | Msa1086840 | 0.820861 | 5.484524e-53 | -8.615850e-47 |
| Msa0686950 | Msa1128610 | 0.837718 | 4.406473e-57 | -8.615850e-47 |
| Msa0686950 | Msa1129300 | 0.848403 | 6.267522e-60 | -8.615850e-47 |
| Msa0686950 | Msa1132900 | 0.818128 | 2.303775e-52 | -8.615850e-47 |
| Msa0686950 | Msa1143370 | 0.802929 | 4.442803e-49 | -8.615850e-47 |
| Msa0686950 | Msa1206400 | 0.815467 | 9.108739e-52 | -8.615850e-47 |
| Msa0686950 | Msa1206450 | 0.814651 | 1.382343e-51 | -8.615850e-47 |
| Msa0686950 | Msa1209870 | 0.808222 | 3.442733e-50 | -8.615850e-47 |
| Msa0686950 | Msa1236120 | 0.803449 | 3.467420e-49 | -8.615850e-47 |
| Msa0686950 | Msa1258030 | 0.817922 | 2.565233e-52 | -8.615850e-47 |
| Msa0686950 | Msa1273620 | 0.807345 | 5.288640e-50 | -8.615850e-47 |
| Msa0686950 | Msa1311600 | 0.801984 | 6.957982e-49 | -8.615850e-47 |
| Msa0686950 | Msa1330540 | 0.802505 | 5.435672e-49 | -8.615850e-47 |
| Msa0686950 | Msa1330560 | -0.805548 | 1.265974e-49 | -8.615850e-47 |
| Msa0686950 | Msa1333220 | 0.836001 | 1.208347e-56 | -8.615850e-47 |
| Msa0686950 | Msa1342960 | 0.958783 | 9.999640e-117 | -8.615850e-47 |
| Msa0686950 | Msa1354860 | 0.803556 | 3.294807e-49 | -8.615850e-47 |
| Msa0686950 | Msa1355030 | 0.814217 | 1.723567e-51 | -8.615850e-47 |
| Msa0686950 | Msa1361670 | 0.835767 | 1.385428e-56 | -8.615850e-47 |
| Msa0686950 | Msa1364350 | 0.864689 | 1.014890e-64 | -8.615850e-47 |
| Msa0686950 | Msa1365030 | 0.825150 | 5.484826e-54 | -8.615850e-47 |
| Msa0686950 | Msa1367260 | 0.801399 | 9.172188e-49 | -8.615850e-47 |
| Msa0686950 | Msa1367400 | 0.824350 | 8.466277e-54 | -8.615850e-47 |
| Msa0686950 | Msa1372770 | 0.863679 | 2.095822e-64 | -8.615850e-47 |
| Msa0686950 | Msa1375610 | 0.829014 | 6.524780e-55 | -8.615850e-47 |
| Msa0686950 | Msa1376550 | 0.819842 | 9.390623e-53 | -8.615850e-47 |
| Msa0686950 | Msa1382380 | 0.883073 | 6.105837e-71 | -8.615850e-47 |
| Msa0686950 | Msa1383620 | 0.818913 | 1.529486e-52 | -8.615850e-47 |
| Msa0686950 | Msa1388030 | 0.868141 | 8.138538e-66 | -8.615850e-47 |
| Msa0686950 | Msa1394080 | 0.816198 | 6.258999e-52 | -8.615850e-47 |
| Msa0686950 | Msa1394270 | 0.815942 | 7.136346e-52 | -8.615850e-47 |
| Msa0686950 | Msa1410480 | 0.808898 | 2.470392e-50 | -8.615850e-47 |
| Msa0686950 | Msa1428230 | 0.809997 | 1.434734e-50 | -8.615850e-47 |
| Msa0686950 | Msa1429380 | 0.802102 | 6.580114e-49 | -8.615850e-47 |
| Msa0686950 | Msa1431510 | 0.835628 | 1.501980e-56 | -8.615850e-47 |
| Msa0686950 | Msa1457390 | 0.812463 | 4.186347e-51 | -8.615850e-47 |
| Msa0686950 | Msa1462680 | 0.821802 | 3.326574e-53 | -8.615850e-47 |
| Msa0120880 | Msa0686950 | -0.801324 | 9.500961e-49 | -8.615850e-47 |
| Msa0123800 | Msa0686950 | -0.816803 | 4.580282e-52 | -8.615850e-47 |
| Msa0126000 | Msa0686950 | 0.805104 | 1.568130e-49 | -8.615850e-47 |
| Msa0129930 | Msa0686950 | 0.803059 | 4.176781e-49 | -8.615850e-47 |
| Msa0133140 | Msa0686950 | 0.812621 | 3.867374e-51 | -8.615850e-47 |
| Msa0136870 | Msa0686950 | 0.861718 | 8.425908e-64 | -8.615850e-47 |
| Msa0138990 | Msa0686950 | 0.820340 | 7.224415e-53 | -8.615850e-47 |
| Msa0140770 | Msa0686950 | 0.852106 | 5.739090e-61 | -8.615850e-47 |
| Msa0151380 | Msa0686950 | 0.813964 | 1.960138e-51 | -8.615850e-47 |
| Msa0151510 | Msa0686950 | 0.830608 | 2.668385e-55 | -8.615850e-47 |
| Msa0152220 | Msa0686950 | -0.818842 | 1.587039e-52 | -8.615850e-47 |
| Msa0154880 | Msa0686950 | 0.835288 | 1.830764e-56 | -8.615850e-47 |
| Msa0154890 | Msa0686950 | 0.841850 | 3.700035e-58 | -8.615850e-47 |
| Msa0168310 | Msa0686950 | -0.858872 | 6.114685e-63 | -8.615850e-47 |
| Msa0168770 | Msa0686950 | 0.816013 | 6.880567e-52 | -8.615850e-47 |
| Msa0173950 | Msa0686950 | 0.832453 | 9.371367e-56 | -8.615850e-47 |
| Msa0178840 | Msa0686950 | 0.850781 | 1.360145e-60 | -8.615850e-47 |
| Msa0183310 | Msa0686950 | 0.801142 | 1.035288e-48 | -8.615850e-47 |
| Msa0187590 | Msa0686950 | 0.840329 | 9.287266e-58 | -8.615850e-47 |
| Msa0220400 | Msa0686950 | 0.863608 | 2.204197e-64 | -8.615850e-47 |
| Msa0221850 | Msa0686950 | 0.806387 | 8.431803e-50 | -8.615850e-47 |
| Msa0223500 | Msa0686950 | 0.803115 | 4.065556e-49 | -8.615850e-47 |
| Msa0223830 | Msa0686950 | 0.839480 | 1.545510e-57 | -8.615850e-47 |
| Msa0225190 | Msa0686950 | 0.829078 | 6.294427e-55 | -8.615850e-47 |
| Msa0225790 | Msa0686950 | 0.826045 | 3.364548e-54 | -8.615850e-47 |
| Msa0234410 | Msa0686950 | 0.810769 | 9.776699e-51 | -8.615850e-47 |
| Msa0370580 | Msa0686950 | 0.822136 | 2.784123e-53 | -8.615850e-47 |
| Msa0373120 | Msa0686950 | 0.811692 | 6.164290e-51 | -8.615850e-47 |
| Msa0375310 | Msa0686950 | -0.809175 | 2.154686e-50 | -8.615850e-47 |
| Msa0380400 | Msa0686950 | 0.814061 | 1.865933e-51 | -8.615850e-47 |
| Msa0385930 | Msa0686950 | 0.875839 | 2.245249e-68 | -8.615850e-47 |
| Msa0389080 | Msa0686950 | 0.807223 | 5.613503e-50 | -8.615850e-47 |
| Msa0403480 | Msa0686950 | 0.861499 | 9.830317e-64 | -8.615850e-47 |
| Msa0421500 | Msa0686950 | -0.807744 | 4.352013e-50 | -8.615850e-47 |
| Msa0436300 | Msa0686950 | 0.802156 | 6.413485e-49 | -8.615850e-47 |
| Msa0461620 | Msa0686950 | 0.807954 | 3.926659e-50 | -8.615850e-47 |
| Msa0476170 | Msa0686950 | 0.823284 | 1.504482e-53 | -8.615850e-47 |
| Msa0476890 | Msa0686950 | 0.803299 | 3.725512e-49 | -8.615850e-47 |
| Msa0479760 | Msa0686950 | 0.848152 | 7.351358e-60 | -8.615850e-47 |
| Msa0260580 | Msa0686950 | 0.838517 | 2.743078e-57 | -8.615850e-47 |
| Msa0260640 | Msa0686950 | 0.820326 | 7.277448e-53 | -8.615850e-47 |
| Msa0261660 | Msa0686950 | 0.818564 | 1.835472e-52 | -8.615850e-47 |
| Msa0262350 | Msa0686950 | 0.827162 | 1.821388e-54 | -8.615850e-47 |
| Msa0268210 | Msa0686950 | 0.843912 | 1.046542e-58 | -8.615850e-47 |
| Msa0268350 | Msa0686950 | 0.809000 | 2.348720e-50 | -8.615850e-47 |
| Msa0268440 | Msa0686950 | 0.800056 | 1.723713e-48 | -8.615850e-47 |
| Msa0268450 | Msa0686950 | 0.860010 | 2.781536e-63 | -8.615850e-47 |
| Msa0268670 | Msa0686950 | 0.859789 | 3.243659e-63 | -8.615850e-47 |
| Msa0268880 | Msa0686950 | 0.855944 | 4.490041e-62 | -8.615850e-47 |
| Msa0269090 | Msa0686950 | 0.838417 | 2.910930e-57 | -8.615850e-47 |
| Msa0293070 | Msa0686950 | 0.827566 | 1.457735e-54 | -8.615850e-47 |
| Msa0293720 | Msa0686950 | -0.800702 | 1.273163e-48 | -8.615850e-47 |
| Msa0295030 | Msa0686950 | 0.807073 | 6.040996e-50 | -8.615850e-47 |
| Msa0297610 | Msa0686950 | -0.803806 | 2.924610e-49 | -8.615850e-47 |
| Msa0299530 | Msa0686950 | 0.835277 | 1.842869e-56 | -8.615850e-47 |
| Msa0300130 | Msa0686950 | 0.800025 | 1.748625e-48 | -8.615850e-47 |
| Msa0310720 | Msa0686950 | 0.841159 | 5.628224e-58 | -8.615850e-47 |
| Msa0310730 | Msa0686950 | 0.856335 | 3.449021e-62 | -8.615850e-47 |
| Msa0332200 | Msa0686950 | -0.800384 | 1.478059e-48 | -8.615850e-47 |
| Msa0335730 | Msa0686950 | -0.815109 | 1.093724e-51 | -8.615850e-47 |
| Msa0358220 | Msa0686950 | 0.803967 | 2.707524e-49 | -8.615850e-47 |
| Msa0513990 | Msa0686950 | -0.802982 | 4.332326e-49 | -8.615850e-47 |
| Msa0523420 | Msa0686950 | 0.813268 | 2.789606e-51 | -8.615850e-47 |
| Msa0523430 | Msa0686950 | 0.889853 | 1.669389e-73 | -8.615850e-47 |
| Msa0523490 | Msa0686950 | 0.887641 | 1.193341e-72 | -8.615850e-47 |
| Msa0536360 | Msa0686950 | 0.819462 | 1.146923e-52 | -8.615850e-47 |
| Msa0548650 | Msa0686950 | 0.846164 | 2.579986e-59 | -8.615850e-47 |
| Msa0550990 | Msa0686950 | 0.821156 | 4.690265e-53 | -8.615850e-47 |
| Msa0566940 | Msa0686950 | 0.806749 | 7.072184e-50 | -8.615850e-47 |
| Msa0576020 | Msa0686950 | 0.870159 | 1.801417e-66 | -8.615850e-47 |
| Msa0576080 | Msa0686950 | 0.870938 | 9.991010e-67 | -8.615850e-47 |
| Msa0576090 | Msa0686950 | 0.804673 | 1.929295e-49 | -8.615850e-47 |
| Msa0576120 | Msa0686950 | 0.894447 | 2.444224e-75 | -8.615850e-47 |
| Msa0582560 | Msa0686950 | 0.827926 | 1.194711e-54 | -8.615850e-47 |
| Msa0582860 | Msa0686950 | 0.831032 | 2.100787e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0686950 | MtrunA17_Chr4g0037131 | 99.652 | 287 | 1 | 0 | 1 | 287 | 1 | 287 | 0.0 | 588 |
| Msa0686950 | MtrunA17_Chr5g0405731 | 71.685 | 279 | 74 | 1 | 7 | 285 | 6 | 279 | 2.89e-152 | 426 |
| Msa0686950 | MtrunA17_Chr4g0030171 | 64.050 | 242 | 86 | 1 | 6 | 246 | 7 | 248 | 8.45e-111 | 320 |
| Msa0686950 | MtrunA17_Chr3g0124821 | 49.237 | 262 | 106 | 6 | 14 | 248 | 100 | 361 | 7.51e-78 | 241 |
| Msa0686950 | MtrunA17_Chr3g0137751 | 38.017 | 242 | 126 | 7 | 13 | 244 | 87 | 314 | 2.37e-43 | 150 |
| Msa0686950 | MtrunA17_Chr4g0068621 | 29.358 | 218 | 107 | 7 | 75 | 249 | 111 | 324 | 3.99e-16 | 77.4 |
| Msa0686950 | MtrunA17_Chr7g0225221 | 28.226 | 248 | 135 | 8 | 36 | 244 | 60 | 303 | 1.52e-15 | 75.5 |
| Msa0686950 | MtrunA17_Chr4g0072091 | 28.102 | 274 | 142 | 10 | 32 | 258 | 55 | 320 | 8.25e-15 | 73.6 |
| Msa0686950 | MtrunA17_Chr1g0188431 | 29.771 | 262 | 130 | 11 | 23 | 243 | 61 | 309 | 1.18e-14 | 73.2 |
| Msa0686950 | MtrunA17_Chr5g0426581 | 34.911 | 169 | 76 | 5 | 24 | 158 | 109 | 277 | 1.21e-14 | 73.2 |
| Msa0686950 | MtrunA17_Chr4g0053871 | 26.374 | 273 | 150 | 9 | 32 | 260 | 58 | 323 | 6.10e-14 | 70.9 |
| Msa0686950 | MtrunA17_Chr3g0129061 | 26.857 | 175 | 90 | 5 | 103 | 243 | 134 | 304 | 1.50e-12 | 67.0 |
| Msa0686950 | MtrunA17_Chr4g0013181 | 27.344 | 256 | 126 | 9 | 35 | 243 | 93 | 335 | 1.83e-12 | 66.6 |
| Msa0686950 | MtrunA17_Chr7g0254201 | 26.316 | 247 | 140 | 9 | 35 | 244 | 54 | 295 | 3.18e-12 | 65.9 |
| Msa0686950 | MtrunA17_Chr2g0278671 | 30.952 | 168 | 97 | 6 | 9 | 164 | 30 | 190 | 3.84e-12 | 65.9 |
| Msa0686950 | MtrunA17_Chr5g0432331 | 27.344 | 256 | 128 | 9 | 35 | 243 | 90 | 334 | 8.04e-12 | 65.1 |
| Msa0686950 | MtrunA17_Chr3g0106921 | 25.197 | 254 | 133 | 7 | 35 | 242 | 59 | 301 | 1.87e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0686950 | AT4G35000.1 | 78.472 | 288 | 60 | 2 | 1 | 287 | 1 | 287 | 3.03e-160 | 447 |
| Msa0686950 | AT4G35970.1 | 66.431 | 283 | 89 | 2 | 5 | 287 | 3 | 279 | 1.72e-134 | 382 |
| Msa0686950 | AT4G35970.2 | 70.909 | 220 | 63 | 1 | 5 | 224 | 3 | 221 | 5.46e-113 | 325 |
| Msa0686950 | AT3G09640.2 | 62.083 | 240 | 91 | 0 | 7 | 246 | 9 | 248 | 6.15e-107 | 311 |
| Msa0686950 | AT3G09640.1 | 62.083 | 240 | 91 | 0 | 7 | 246 | 9 | 248 | 6.15e-107 | 311 |
| Msa0686950 | AT1G07890.2 | 60.331 | 242 | 95 | 1 | 6 | 246 | 7 | 248 | 5.49e-104 | 303 |
| Msa0686950 | AT1G07890.8 | 60.331 | 242 | 95 | 1 | 6 | 246 | 7 | 248 | 5.49e-104 | 303 |
| Msa0686950 | AT1G07890.4 | 60.331 | 242 | 95 | 1 | 6 | 246 | 7 | 248 | 5.49e-104 | 303 |
| Msa0686950 | AT1G07890.7 | 60.331 | 242 | 95 | 1 | 6 | 246 | 7 | 248 | 5.49e-104 | 303 |
| Msa0686950 | AT1G07890.1 | 60.331 | 242 | 95 | 1 | 6 | 246 | 7 | 248 | 5.49e-104 | 303 |
| Msa0686950 | AT1G07890.3 | 60.331 | 242 | 95 | 1 | 6 | 246 | 7 | 248 | 5.49e-104 | 303 |
| Msa0686950 | AT1G07890.5 | 60.331 | 242 | 95 | 1 | 6 | 246 | 7 | 248 | 5.49e-104 | 303 |
| Msa0686950 | AT1G07890.6 | 59.751 | 241 | 96 | 1 | 6 | 245 | 7 | 247 | 6.06e-103 | 301 |
| Msa0686950 | AT4G08390.2 | 48.047 | 256 | 108 | 4 | 14 | 244 | 106 | 361 | 2.72e-76 | 237 |
| Msa0686950 | AT4G08390.5 | 48.047 | 256 | 108 | 4 | 14 | 244 | 106 | 361 | 2.72e-76 | 237 |
| Msa0686950 | AT4G08390.1 | 48.047 | 256 | 108 | 4 | 14 | 244 | 106 | 361 | 2.72e-76 | 237 |
| Msa0686950 | AT4G08390.3 | 48.047 | 256 | 108 | 4 | 14 | 244 | 105 | 360 | 3.25e-76 | 237 |
| Msa0686950 | AT1G77490.2 | 48.828 | 256 | 106 | 4 | 14 | 244 | 85 | 340 | 1.76e-75 | 236 |
| Msa0686950 | AT1G77490.1 | 48.828 | 256 | 106 | 4 | 14 | 244 | 85 | 340 | 1.91e-75 | 236 |
| Msa0686950 | AT4G08390.4 | 44.141 | 256 | 92 | 5 | 14 | 244 | 106 | 335 | 2.26e-65 | 208 |
| Msa0686950 | AT4G32320.1 | 39.035 | 228 | 118 | 5 | 26 | 244 | 108 | 323 | 1.48e-41 | 146 |
| Msa0686950 | AT2G24800.1 | 32.308 | 195 | 90 | 4 | 90 | 244 | 120 | 312 | 7.51e-18 | 82.4 |
| Msa0686950 | AT4G31760.1 | 31.443 | 194 | 92 | 5 | 90 | 244 | 118 | 309 | 3.74e-17 | 80.5 |
| Msa0686950 | AT3G28200.1 | 30.890 | 191 | 90 | 4 | 90 | 244 | 115 | 299 | 2.19e-16 | 78.2 |
| Msa0686950 | AT4G30170.1 | 27.626 | 257 | 136 | 7 | 32 | 244 | 58 | 308 | 1.38e-15 | 76.3 |
| Msa0686950 | AT4G09010.2 | 35.185 | 162 | 67 | 5 | 33 | 158 | 49 | 208 | 1.44e-15 | 75.5 |
| Msa0686950 | AT4G09010.1 | 29.412 | 272 | 111 | 10 | 33 | 262 | 114 | 346 | 2.96e-15 | 75.5 |
| Msa0686950 | AT4G09010.3 | 29.412 | 272 | 111 | 10 | 33 | 262 | 161 | 393 | 5.47e-15 | 74.7 |
| Msa0686950 | AT5G17820.1 | 26.502 | 283 | 136 | 10 | 11 | 240 | 29 | 292 | 2.14e-14 | 72.4 |
| Msa0686950 | AT5G17820.2 | 26.280 | 293 | 144 | 10 | 1 | 240 | 72 | 345 | 7.06e-14 | 71.6 |
| Msa0686950 | AT5G14130.1 | 26.667 | 255 | 141 | 7 | 32 | 244 | 63 | 313 | 8.59e-14 | 70.9 |
| Msa0686950 | AT5G14130.2 | 26.667 | 255 | 141 | 7 | 32 | 244 | 104 | 354 | 1.40e-13 | 70.5 |
| Msa0686950 | AT4G33420.1 | 32.124 | 193 | 97 | 8 | 81 | 243 | 119 | 307 | 3.40e-13 | 69.3 |
| Msa0686950 | AT4G33420.2 | 32.124 | 193 | 97 | 8 | 81 | 243 | 166 | 354 | 3.97e-13 | 69.3 |
| Msa0686950 | AT4G37530.1 | 26.493 | 268 | 141 | 7 | 33 | 251 | 59 | 319 | 6.45e-13 | 68.6 |
| Msa0686950 | AT1G44970.1 | 26.562 | 256 | 135 | 9 | 35 | 243 | 79 | 328 | 7.02e-13 | 68.6 |
| Msa0686950 | AT1G14550.1 | 26.690 | 281 | 160 | 10 | 4 | 243 | 28 | 303 | 9.48e-13 | 67.8 |
| Msa0686950 | AT4G37520.1 | 26.119 | 268 | 142 | 7 | 33 | 251 | 59 | 319 | 1.48e-12 | 67.4 |
| Msa0686950 | AT2G18980.1 | 27.692 | 260 | 132 | 9 | 32 | 244 | 56 | 306 | 3.85e-12 | 66.2 |
| Msa0686950 | AT1G14540.1 | 25.442 | 283 | 160 | 10 | 4 | 243 | 23 | 297 | 1.16e-11 | 64.7 |
| Msa0686950 | AT4G37530.2 | 34.459 | 148 | 81 | 4 | 33 | 167 | 59 | 203 | 3.96e-11 | 62.8 |
Find 108 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGTTGCAGTTGAGGTTAC+TGG | 0.120093 | 4_4:+51581628 | Msa0686950:CDS |
| TCCAACAGACAGGGCTTTAT+TGG | 0.192934 | 4_4:+51582445 | Msa0686950:CDS |
| GATCTTCAAGAGAAAGTAAA+TGG | 0.217985 | 4_4:-51583541 | None:intergenic |
| CCTTTGTGCTTCCAGCTTGC+GGG | 0.246744 | 4_4:+51581604 | Msa0686950:intron |
| TTGCTACATTCTACATCTAT+TGG | 0.258623 | 4_4:+51583433 | Msa0686950:three_prime_UTR |
| GTTATGATGCTGCTCATAAT+TGG | 0.266600 | 4_4:-51583490 | None:intergenic |
| TCCGTTAACAATGGCGTTCC+CGG | 0.280549 | 4_4:+51578653 | Msa0686950:exon |
| TTGTTAACGGAGTTTGATTT+TGG | 0.281222 | 4_4:-51578641 | None:intergenic |
| TCAACATAACGGCGAAATTC+AGG | 0.286433 | 4_4:-51582473 | None:intergenic |
| TGTCAATATCAGGATACTTT+TGG | 0.287568 | 4_4:+51582394 | Msa0686950:intron |
| CCCACAGTCAACTTTGTTCC+TGG | 0.312965 | 4_4:+51581655 | Msa0686950:CDS |
| GTACTGGCACAAAGCGCTTT+TGG | 0.320365 | 4_4:+51583232 | Msa0686950:CDS |
| TTGATTTGATTTGATTTCAT+TGG | 0.341233 | 4_4:+51578513 | Msa0686950:five_prime_UTR |
| TTGTTGCAGTTGAGGTTACT+GGG | 0.345113 | 4_4:+51581629 | Msa0686950:CDS |
| GGTAAATAATCACCTGATAA+AGG | 0.356498 | 4_4:-51579210 | None:intergenic |
| GAACCCAATACTGCTCGTTA+TGG | 0.374494 | 4_4:-51583365 | None:intergenic |
| AGGTCTGCATATGAGATCTT+AGG | 0.374897 | 4_4:-51579190 | None:intergenic |
| GCACAACATACCCTTCTTCC+AGG | 0.375359 | 4_4:-51581673 | None:intergenic |
| TGATTTGATTTGATTTCATT+GGG | 0.376856 | 4_4:+51578514 | Msa0686950:five_prime_UTR |
| AAAGATATTGTTGCACTGTC+TGG | 0.377559 | 4_4:+51582045 | Msa0686950:CDS |
| CTCATATGCAGACCTTTATC+AGG | 0.378885 | 4_4:+51579198 | Msa0686950:CDS |
| TATCAACCACCCACCCATTC+AGG | 0.385197 | 4_4:+51578539 | Msa0686950:five_prime_UTR |
| TGCTACATTCTACATCTATT+GGG | 0.389003 | 4_4:+51583434 | Msa0686950:three_prime_UTR |
| AACCCAATACTGCTCGTTAT+GGG | 0.400077 | 4_4:-51583364 | None:intergenic |
| CATAAGAAACTTTCAGAGCT+TGG | 0.401756 | 4_4:+51583166 | Msa0686950:CDS |
| ACCGGGAACGCCATTGTTAA+CGG | 0.406768 | 4_4:-51578654 | None:intergenic |
| CCATCAAACCCGGATCTCTC+TGG | 0.411433 | 4_4:-51582172 | None:intergenic |
| TTTGATCTGTTCAGCTCTGT+TGG | 0.414035 | 4_4:+51583324 | Msa0686950:three_prime_UTR |
| ACCATTAGGTCCACCGGTCT+TGG | 0.414832 | 4_4:-51578927 | None:intergenic |
| CCAGAGAGATCCGGGTTTGA+TGG | 0.422800 | 4_4:+51582172 | Msa0686950:CDS |
| TCGTTCCGAATAGAACCATT+AGG | 0.431324 | 4_4:-51578941 | None:intergenic |
| GGCCCATAACGAGCAGTATT+GGG | 0.433144 | 4_4:+51583362 | Msa0686950:three_prime_UTR |
| ATCAGGAAGCCGCCCATCTC+TGG | 0.443990 | 4_4:-51581782 | None:intergenic |
| TCAACTTTGTTCCTGGAAGA+AGG | 0.444361 | 4_4:+51581662 | Msa0686950:CDS |
| AAGATATTGTTGCACTGTCT+GGG | 0.448168 | 4_4:+51582046 | Msa0686950:CDS |
| GGAGCAGTTGCCTTTGAGCT+TGG | 0.449217 | 4_4:-51583196 | None:intergenic |
| TGATTCAGGTGGCACGATGC+TGG | 0.451069 | 4_4:+51578887 | Msa0686950:intron |
| CGACAGGATTATTGATCATC+GGG | 0.451924 | 4_4:-51583667 | None:intergenic |
| ACCAAGACCGGTGGACCTAA+TGG | 0.457462 | 4_4:+51578926 | Msa0686950:CDS |
| TCCAATAAAGCCCTGTCTGT+TGG | 0.463470 | 4_4:-51582446 | None:intergenic |
| GATCCGGGTTTGATGGTCCT+TGG | 0.463478 | 4_4:+51582179 | Msa0686950:CDS |
| GCCAGTACGGTTGCATCCAC+AGG | 0.465545 | 4_4:-51583217 | None:intergenic |
| TACTCTGAGTCTACTACTAC+CGG | 0.469129 | 4_4:-51578672 | None:intergenic |
| AACACACCTTGTTTAGCATC+AGG | 0.470481 | 4_4:-51581799 | None:intergenic |
| GCAAGATCCACGTGTCAGTC+AGG | 0.472466 | 4_4:+51578459 | Msa0686950:five_prime_UTR |
| TGCTTAAACTTCCAACAGAC+AGG | 0.474376 | 4_4:+51582435 | Msa0686950:CDS |
| TTTCTCTTGAAGATCGGAAA+AGG | 0.477637 | 4_4:+51583549 | Msa0686950:three_prime_UTR |
| ATTTACTTTCTCTTGAAGAT+CGG | 0.485075 | 4_4:+51583543 | Msa0686950:three_prime_UTR |
| AGAGCACATCCAGAGAGATC+CGG | 0.490027 | 4_4:+51582163 | Msa0686950:CDS |
| GCCGCTGCAGTGGTGATCCT+CGG | 0.490613 | 4_4:+51583265 | Msa0686950:CDS |
| TCAAAAGTATGTACCAGAGA+TGG | 0.493165 | 4_4:+51581769 | Msa0686950:CDS |
| TCCTGTGGATGCAACCGTAC+TGG | 0.493313 | 4_4:+51583216 | Msa0686950:CDS |
| GTGGACCTAATGGTTCTATT+CGG | 0.494846 | 4_4:+51578936 | Msa0686950:CDS |
| TGGCCCATAACGAGCAGTAT+TGG | 0.498931 | 4_4:+51583361 | Msa0686950:three_prime_UTR |
| CTCAAAGGCAACTGCTCCTG+TGG | 0.511925 | 4_4:+51583201 | Msa0686950:CDS |
| GATACTAAGAAAACATAGAC+TGG | 0.514576 | 4_4:-51583400 | None:intergenic |
| GAGCACATCCAGAGAGATCC+GGG | 0.520069 | 4_4:+51582164 | Msa0686950:CDS |
| AGTGGTAGTGAATGCCTGAA+TGG | 0.523106 | 4_4:-51578553 | None:intergenic |
| TGCGGGTGTTGTTGCAGTTG+AGG | 0.524490 | 4_4:+51581621 | Msa0686950:CDS |
| TTGTATGAAACTCACAAAAG+AGG | 0.531958 | 4_4:+51583292 | Msa0686950:CDS |
| TTCTGTTGGCGATGAGAGCA+CGG | 0.540281 | 4_4:-51578728 | None:intergenic |
| ATCTTCAAGAGAAAGTAAAT+GGG | 0.544266 | 4_4:-51583540 | None:intergenic |
| CAACTTTGTTCCTGGAAGAA+GGG | 0.545120 | 4_4:+51581663 | Msa0686950:CDS |
| GTTTGATGGTCCTTGGACAG+AGG | 0.549551 | 4_4:+51582186 | Msa0686950:CDS |
| CAAAAGTATGTACCAGAGAT+GGG | 0.549843 | 4_4:+51581770 | Msa0686950:CDS |
| TGTATGAAACTCACAAAAGA+GGG | 0.552331 | 4_4:+51583293 | Msa0686950:CDS |
| TTCAGAGGGTCCTCTGTCCA+AGG | 0.554982 | 4_4:-51582196 | None:intergenic |
| GAGGGGAGCACAGTTTCTGT+TGG | 0.557155 | 4_4:-51578742 | None:intergenic |
| TATGAGTTATCAAACTTCAG+AGG | 0.559558 | 4_4:-51582211 | None:intergenic |
| TGGCTTTGCACCAAGCTCAA+AGG | 0.560692 | 4_4:+51583186 | Msa0686950:CDS |
| ACGACAGGATTATTGATCAT+CGG | 0.568417 | 4_4:-51583668 | None:intergenic |
| AAAAGCGCTTTGTGCCAGTA+CGG | 0.571570 | 4_4:-51583230 | None:intergenic |
| CGGCTTCCTGATGCTAAACA+AGG | 0.575592 | 4_4:+51581793 | Msa0686950:CDS |
| TATGATGCAAAGACCAAGAC+CGG | 0.589691 | 4_4:+51578914 | Msa0686950:CDS |
| TAGTGAATGCCTGAATGGGT+GGG | 0.590930 | 4_4:-51578548 | None:intergenic |
| AATAGAACCATTAGGTCCAC+CGG | 0.593542 | 4_4:-51578933 | None:intergenic |
| GTGGTAGTGAATGCCTGAAT+GGG | 0.595271 | 4_4:-51578552 | None:intergenic |
| TACGCTAAGCGAAGCATGAG+GGG | 0.595394 | 4_4:-51578759 | None:intergenic |
| ATGAGTTATCAAACTTCAGA+GGG | 0.599283 | 4_4:-51582210 | None:intergenic |
| CTCTTCACCTGACTGACACG+TGG | 0.599612 | 4_4:-51578466 | None:intergenic |
| CTCTTGAAGATCGGAAAAGG+AGG | 0.601669 | 4_4:+51583552 | Msa0686950:three_prime_UTR |
| TTATGTCACAGAGGAAGTGA+AGG | 0.604368 | 4_4:+51579159 | Msa0686950:intron |
| ACTGTCTGGGGCACATACGC+TGG | 0.608033 | 4_4:+51582059 | Msa0686950:CDS |
| CCATACGATAAAAGATATCA+CGG | 0.612766 | 4_4:-51582011 | None:intergenic |
| TCGCATACAGCTCAACATAA+CGG | 0.615688 | 4_4:-51582484 | None:intergenic |
| AGTAGACTCAGAGTATCTCA+AGG | 0.616880 | 4_4:+51578680 | Msa0686950:CDS |
| TGGAAATGGAAATGGATAAG+TGG | 0.624527 | 4_4:-51578571 | None:intergenic |
| TGTCCAAGGACCATCAAACC+CGG | 0.624885 | 4_4:-51582182 | None:intergenic |
| CCAGGAACAAAGTTGACTGT+GGG | 0.625811 | 4_4:-51581655 | None:intergenic |
| TTACGCTAAGCGAAGCATGA+GGG | 0.626450 | 4_4:-51578760 | None:intergenic |
| ACCGAGGATCACCACTGCAG+CGG | 0.626779 | 4_4:-51583266 | None:intergenic |
| TCCAGGAACAAAGTTGACTG+TGG | 0.628167 | 4_4:-51581656 | None:intergenic |
| AAATCAAACTCCGTTAACAA+TGG | 0.629297 | 4_4:+51578644 | Msa0686950:exon |
| GTAGTGAATGCCTGAATGGG+TGG | 0.632785 | 4_4:-51578549 | None:intergenic |
| AGATATTGTTGCACTGTCTG+GGG | 0.639389 | 4_4:+51582047 | Msa0686950:CDS |
| TTATGTTGAGCTGTATGCGA+AGG | 0.641815 | 4_4:+51582487 | Msa0686950:CDS |
| TGTTGCAGTTGAGGTTACTG+GGG | 0.642422 | 4_4:+51581630 | Msa0686950:CDS |
| TGAATGCCTGAATGGGTGGG+TGG | 0.647149 | 4_4:-51578545 | None:intergenic |
| CTTACGCTAAGCGAAGCATG+AGG | 0.649786 | 4_4:-51578761 | None:intergenic |
| AGTTGTAGCTGCCGCTGCAG+TGG | 0.652303 | 4_4:+51583255 | Msa0686950:CDS |
| GCTTAAACTTCCAACAGACA+GGG | 0.655046 | 4_4:+51582436 | Msa0686950:CDS |
| GTTGCAGTTGAGGTTACTGG+GGG | 0.656351 | 4_4:+51581631 | Msa0686950:CDS |
| TGTTGGATGTCACGTCTGTG+TGG | 0.663043 | 4_4:+51583341 | Msa0686950:three_prime_UTR |
| ACTCTGAGTCTACTACTACC+GGG | 0.677019 | 4_4:-51578671 | None:intergenic |
| TAATGGTTCTATTCGGAACG+AGG | 0.677025 | 4_4:+51578943 | Msa0686950:CDS |
| GAGTTTCATACAAGTAACCG+AGG | 0.700364 | 4_4:-51583282 | None:intergenic |
| GATGCAAAGACCAAGACCGG+TGG | 0.716515 | 4_4:+51578917 | Msa0686950:CDS |
| AAGTATGTACCAGAGATGGG+CGG | 0.726843 | 4_4:+51581773 | Msa0686950:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAAAATAAAATATT+GGG | - | chr4_4:51582321-51582340 | None:intergenic | 0.0% |
| !! | AAAAAATAAAAATAAAATAT+TGG | - | chr4_4:51582322-51582341 | None:intergenic | 0.0% |
| !!! | TTATTTTTTAATTTTTATTT+TGG | + | chr4_4:51582333-51582352 | Msa0686950:intron | 0.0% |
| !! | AATTATTATAGTTAATAGTT+CGG | - | chr4_4:51579638-51579657 | None:intergenic | 10.0% |
| !! | TATTAACTATAATAATTGAA+TGG | + | chr4_4:51579641-51579660 | Msa0686950:intron | 10.0% |
| !!! | AATATTTTTATGATTTTTTG+GGG | - | chr4_4:51580423-51580442 | None:intergenic | 10.0% |
| !!! | GAATATTTTTATGATTTTTT+GGG | - | chr4_4:51580422-51580441 | None:intergenic | 10.0% |
| !!! | TGAATATTTTTATGATTTTT+TGG | - | chr4_4:51580421-51580440 | None:intergenic | 10.0% |
| !!! | AGATTTTTTTTAAATAATTC+TGG | + | chr4_4:51579930-51579949 | Msa0686950:intron | 10.0% |
| !!! | AAAATTAATCTTTAAAAATC+TGG | + | chr4_4:51579957-51579976 | Msa0686950:intron | 10.0% |
| !!! | GATTTTTTTTTTAAAAATTC+TGG | + | chr4_4:51580003-51580022 | Msa0686950:intron | 10.0% |
| !!! | AAAAGTAAATTTTGTATATT+TGG | + | chr4_4:51580156-51580175 | Msa0686950:intron | 10.0% |
| !!! | AAATTTAATTTTGAAAAATC+TGG | - | chr4_4:51580261-51580280 | None:intergenic | 10.0% |
| !!! | AGATTTTTTTAAAAAAATTC+TGG | - | chr4_4:51580288-51580307 | None:intergenic | 10.0% |
| !!! | TTTCGATTTTTTAAATTTTT+TGG | + | chr4_4:51580390-51580409 | Msa0686950:intron | 10.0% |
| !!! | TGAATATTTTTATGATTTTT+TGG | + | chr4_4:51580421-51580440 | Msa0686950:intron | 10.0% |
| !!! | GAATATTTTTATGATTTTTT+GGG | + | chr4_4:51580422-51580441 | Msa0686950:intron | 10.0% |
| !!! | AATATTTTTATGATTTTTTG+GGG | + | chr4_4:51580423-51580442 | Msa0686950:intron | 10.0% |
| !! | AATAATAAAAAGATATAGAA+AGG | - | chr4_4:51582092-51582111 | None:intergenic | 10.0% |
| !! | GAAAATAAAATAAGAATTTA+TGG | - | chr4_4:51582129-51582148 | None:intergenic | 10.0% |
| !! | TGAATATCATATAATATCAT+TGG | + | chr4_4:51579108-51579127 | Msa0686950:intron | 15.0% |
| !!! | TATATCCAGATTTTAAAAAA+AGG | + | chr4_4:51579905-51579924 | Msa0686950:intron | 15.0% |
| !!! | TGGATACAAATTTTAAAAAA+AGG | + | chr4_4:51579977-51579996 | Msa0686950:intron | 15.0% |
| !!! | TGGATACAAATTTTAAAAAT+AGG | + | chr4_4:51580050-51580069 | Msa0686950:intron | 15.0% |
| !! | TTTCAAAATACAAAAAAATC+TGG | + | chr4_4:51580096-51580115 | Msa0686950:intron | 15.0% |
| !!! | TTTGTATTCAGATTTTTAAA+AGG | - | chr4_4:51580194-51580213 | None:intergenic | 15.0% |
| !!! | TGGATACAAATTTTAAAAAA+AGG | - | chr4_4:51579977-51579996 | None:intergenic | 15.0% |
| !!! | CAGATTTTTTTTTTAAATTC+TGG | - | chr4_4:51580342-51580361 | None:intergenic | 15.0% |
| !!! | TGTTATTTTAGTATTCAATT+AGG | - | chr4_4:51580557-51580576 | None:intergenic | 15.0% |
| !! | TACTATATATGAAAATCAAA+CGG | - | chr4_4:51581302-51581321 | None:intergenic | 15.0% |
| !!! | AGATTCATTTAATTTAATGA+TGG | - | chr4_4:51583057-51583076 | None:intergenic | 15.0% |
| !!! | TTGATTTGATTTGATTTCAT+TGG | + | chr4_4:51578513-51578532 | Msa0686950:five_prime_UTR | 20.0% |
| !!! | TGATTTGATTTGATTTCATT+GGG | + | chr4_4:51578514-51578533 | Msa0686950:five_prime_UTR | 20.0% |
| !! | ATTATATTATGCCTTGAATT+AGG | + | chr4_4:51580820-51580839 | Msa0686950:intron | 20.0% |
| !! | TTTCATAACTATCGAAATTT+AGG | - | chr4_4:51581167-51581186 | None:intergenic | 20.0% |
| !! | ACATATAAAGTGATTAAATC+CGG | + | chr4_4:51581434-51581453 | Msa0686950:intron | 20.0% |
| !! | ATAACTAATATTGTAACGAA+AGG | - | chr4_4:51581703-51581722 | None:intergenic | 20.0% |
| !!! | ATTTTATTTTCTGTGTTTCA+AGG | + | chr4_4:51582138-51582157 | Msa0686950:intron | 20.0% |
| !!! | TTTTATTTTCTGTGTTTCAA+GGG | + | chr4_4:51582139-51582158 | Msa0686950:intron | 20.0% |
| !! | ATATTGACAAAGATATTTAG+CGG | - | chr4_4:51582383-51582402 | None:intergenic | 20.0% |
| !! | TAAATATCTTTGTCAATATC+AGG | + | chr4_4:51582384-51582403 | Msa0686950:intron | 20.0% |
| !!! | TTTTTAGCAAAACAGAAAAT+TGG | - | chr4_4:51582978-51582997 | None:intergenic | 20.0% |
| !! | ATTTTGTATGGAAATGGAAA+TGG | - | chr4_4:51578582-51578601 | None:intergenic | 25.0% |
| !!! | AAGAAAGCTATTGATTTTTG+CGG | + | chr4_4:51578998-51579017 | Msa0686950:CDS | 25.0% |
| ! | TTACAACAACAAAAAAGTGA+AGG | - | chr4_4:51579080-51579099 | None:intergenic | 25.0% |
| ! | AAACAAGAAAACTCTTAGAA+AGG | - | chr4_4:51579137-51579156 | None:intergenic | 25.0% |
| ! | TGAAACTGAATCTCATTATT+AGG | + | chr4_4:51579512-51579531 | Msa0686950:intron | 25.0% |
| !!! | TCTGACCTTTTTTTAAAATC+TGG | - | chr4_4:51579913-51579932 | None:intergenic | 25.0% |
| ! | TAGAAGACAATTTCTTAAAG+AGG | - | chr4_4:51580686-51580705 | None:intergenic | 25.0% |
| ! | TGTTCTATTCAATCATTTAC+AGG | + | chr4_4:51580728-51580747 | Msa0686950:intron | 25.0% |
| ! | GAAATAAAGAGTTCAGAAAA+TGG | - | chr4_4:51580914-51580933 | None:intergenic | 25.0% |
| !! | AAAATTTGTTTAAGGGAACA+AGG | - | chr4_4:51581005-51581024 | None:intergenic | 25.0% |
| !! | TTGTTCCCTTAAACAAATTT+TGG | + | chr4_4:51581004-51581023 | Msa0686950:intron | 25.0% |
| ! | TGAAATAGAACTACATTTCT+TGG | + | chr4_4:51581105-51581124 | Msa0686950:intron | 25.0% |
| ! | GACACTTACAAAGTAATTAA+GGG | - | chr4_4:51581375-51581394 | None:intergenic | 25.0% |
| ! | AGACACTTACAAAGTAATTA+AGG | - | chr4_4:51581376-51581395 | None:intergenic | 25.0% |
| ! | AATTATTTATCACTCATGCA+GGG | + | chr4_4:51581486-51581505 | Msa0686950:intron | 25.0% |
| !!! | TGCATATCTTGTTTTATACA+AGG | - | chr4_4:51581516-51581535 | None:intergenic | 25.0% |
| !! | TGTTTCTAAATTATTGTCAG+TGG | + | chr4_4:51581818-51581837 | Msa0686950:intron | 25.0% |
| !! | CTTAATTTTGTTGATGTGTA+GGG | - | chr4_4:51581919-51581938 | None:intergenic | 25.0% |
| !! | TCTTAATTTTGTTGATGTGT+AGG | - | chr4_4:51581920-51581939 | None:intergenic | 25.0% |
| ! | TATAAACATGTCAATGCTAT+TGG | + | chr4_4:51581972-51581991 | Msa0686950:intron | 25.0% |
| !!! | AATTTTTTTGCTTTACTACG+AGG | + | chr4_4:51582269-51582288 | Msa0686950:intron | 25.0% |
| ! | ATGGACTTATAAAATGCTAT+TGG | - | chr4_4:51582598-51582617 | None:intergenic | 25.0% |
| !! | TATTGGATCAATCTTTTGAT+TGG | + | chr4_4:51582640-51582659 | Msa0686950:intron | 25.0% |
| ! | ATATTAAGTAAGAAAGCTGT+TGG | - | chr4_4:51582798-51582817 | None:intergenic | 25.0% |
| ! | TCCTTATGTTACAACTATTA+AGG | + | chr4_4:51582874-51582893 | Msa0686950:intron | 25.0% |
| ! | ACCTTAATAGTTGTAACATA+AGG | - | chr4_4:51582878-51582897 | None:intergenic | 25.0% |
| !! | AAAATTGGCATGAATGTTTT+GGG | - | chr4_4:51582963-51582982 | None:intergenic | 25.0% |
| ! | TAATCGAAGAAAATCAATAG+TGG | + | chr4_4:51582999-51583018 | Msa0686950:intron | 25.0% |
| ! | ATCTTCAAGAGAAAGTAAAT+GGG | - | chr4_4:51583543-51583562 | None:intergenic | 25.0% |
| ! | ATTTACTTTCTCTTGAAGAT+CGG | + | chr4_4:51583543-51583562 | Msa0686950:three_prime_UTR | 25.0% |
| ! | AGTGAGATTTTGTATGGAAA+TGG | - | chr4_4:51578588-51578607 | None:intergenic | 30.0% |
| !! | TTGTTAACGGAGTTTGATTT+TGG | - | chr4_4:51578644-51578663 | None:intergenic | 30.0% |
| AAATCAAACTCCGTTAACAA+TGG | + | chr4_4:51578644-51578663 | Msa0686950:exon | 30.0% | |
| TCTTACGTTCGTTAATTTCA+CGG | + | chr4_4:51578840-51578859 | Msa0686950:intron | 30.0% | |
| ! | CGATTTTGTTAATCTGATTC+AGG | + | chr4_4:51578873-51578892 | Msa0686950:intron | 30.0% |
| ! | TTTTGTTAATCTGATTCAGG+TGG | + | chr4_4:51578876-51578895 | Msa0686950:intron | 30.0% |
| !! | TTTTCTCATGGTGCTAATAA+TGG | + | chr4_4:51578971-51578990 | Msa0686950:CDS | 30.0% |
| GGTAAATAATCACCTGATAA+AGG | - | chr4_4:51579213-51579232 | None:intergenic | 30.0% | |
| TTTACATAACAAGTGAGTGA+AGG | - | chr4_4:51579234-51579253 | None:intergenic | 30.0% | |
| GCACTTGAACACAAAATTAT+TGG | - | chr4_4:51579269-51579288 | None:intergenic | 30.0% | |
| ! | TTTTGCTAGAAGTTGTAGAA+TGG | + | chr4_4:51579289-51579308 | Msa0686950:intron | 30.0% |
| TTTGCTAGAAGTTGTAGAAT+GGG | + | chr4_4:51579290-51579309 | Msa0686950:intron | 30.0% | |
| ACAAACAATGTAGCAGAAAT+AGG | - | chr4_4:51579398-51579417 | None:intergenic | 30.0% | |
| AACTGAATCTCATTATTAGG+TGG | + | chr4_4:51579515-51579534 | Msa0686950:intron | 30.0% | |
| TCTTCTACCCAAAGAAAAAA+AGG | + | chr4_4:51580699-51580718 | Msa0686950:intron | 30.0% | |
| CTTCTACCCAAAGAAAAAAA+GGG | + | chr4_4:51580700-51580719 | Msa0686950:intron | 30.0% | |
| !!! | AACCATCCCTTTTTTTCTTT+GGG | - | chr4_4:51580709-51580728 | None:intergenic | 30.0% |
| TATTCAATCATTTACAGGCT+TGG | + | chr4_4:51580733-51580752 | Msa0686950:intron | 30.0% | |
| ! | ACACAAAGTATTACAGCATT+AGG | - | chr4_4:51580767-51580786 | None:intergenic | 30.0% |
| TTATGCCTTGAATTAGGATA+AGG | + | chr4_4:51580826-51580845 | Msa0686950:intron | 30.0% | |
| TATGCCTTGAATTAGGATAA+GGG | + | chr4_4:51580827-51580846 | Msa0686950:intron | 30.0% | |
| TTCTGTGATAAACCATTTGA+AGG | + | chr4_4:51580855-51580874 | Msa0686950:intron | 30.0% | |
| TCTGTGATAAACCATTTGAA+GGG | + | chr4_4:51580856-51580875 | Msa0686950:intron | 30.0% | |
| ! | CGTTGCCAAAATTTGTTTAA+GGG | - | chr4_4:51581012-51581031 | None:intergenic | 30.0% |
| ! | ACGTTGCCAAAATTTGTTTA+AGG | - | chr4_4:51581013-51581032 | None:intergenic | 30.0% |
| TTACATGTATCCAAACTTAG+TGG | + | chr4_4:51581249-51581268 | Msa0686950:intron | 30.0% | |
| CTCTCTATTTCAATATGTAC+CGG | - | chr4_4:51581456-51581475 | None:intergenic | 30.0% | |
| ACATATTGAAATAGAGAGGA+AGG | + | chr4_4:51581458-51581477 | Msa0686950:intron | 30.0% | |
| GAATTATTTATCACTCATGC+AGG | + | chr4_4:51581485-51581504 | Msa0686950:intron | 30.0% | |
| AATTAGAGAATGACAAGTTC+AGG | - | chr4_4:51581731-51581750 | None:intergenic | 30.0% | |
| ! | TCTAATTTTCTGTGTCATGT+AGG | + | chr4_4:51581744-51581763 | Msa0686950:intron | 30.0% |
| AGAAAAGAAAATCCTTTCAC+AGG | - | chr4_4:51581889-51581908 | None:intergenic | 30.0% | |
| CCATACGATAAAAGATATCA+CGG | - | chr4_4:51582014-51582033 | None:intergenic | 30.0% | |
| ! | CGTGATATCTTTTATCGTAT+GGG | + | chr4_4:51582012-51582031 | Msa0686950:CDS | 30.0% |
| !! | TTTATTATTTGCTGTGATCG+CGG | + | chr4_4:51582103-51582122 | Msa0686950:intron | 30.0% |
| ATGAGTTATCAAACTTCAGA+GGG | - | chr4_4:51582213-51582232 | None:intergenic | 30.0% | |
| TATGAGTTATCAAACTTCAG+AGG | - | chr4_4:51582214-51582233 | None:intergenic | 30.0% | |
| ! | TGTCAATATCAGGATACTTT+TGG | + | chr4_4:51582394-51582413 | Msa0686950:intron | 30.0% |
| ! | TATGAAATCAGTTTTCAGCA+GGG | - | chr4_4:51582551-51582570 | None:intergenic | 30.0% |
| ! | TTATGAAATCAGTTTTCAGC+AGG | - | chr4_4:51582552-51582571 | None:intergenic | 30.0% |
| ! | ATAAAGTGTTCTGCCAAATA+TGG | + | chr4_4:51582568-51582587 | Msa0686950:intron | 30.0% |
| ! | TAAAGTGTTCTGCCAAATAT+GGG | + | chr4_4:51582569-51582588 | Msa0686950:intron | 30.0% |
| ! | AAATGCAACAAGAGTACAAA+TGG | - | chr4_4:51582617-51582636 | None:intergenic | 30.0% |
| CTCTTGTTGCATTTGTTTAT+TGG | + | chr4_4:51582623-51582642 | Msa0686950:intron | 30.0% | |
| !! | CATTAAGTAGGTTGATTAGT+AGG | + | chr4_4:51582672-51582691 | Msa0686950:intron | 30.0% |
| ATTTCCTACATGTGCTAATT+GGG | + | chr4_4:51582764-51582783 | Msa0686950:intron | 30.0% | |
| ! | GAAAATTGGCATGAATGTTT+TGG | - | chr4_4:51582964-51582983 | None:intergenic | 30.0% |
| TTGTATGAAACTCACAAAAG+AGG | + | chr4_4:51583292-51583311 | Msa0686950:CDS | 30.0% | |
| TGTATGAAACTCACAAAAGA+GGG | + | chr4_4:51583293-51583312 | Msa0686950:CDS | 30.0% | |
| GATACTAAGAAAACATAGAC+TGG | - | chr4_4:51583403-51583422 | None:intergenic | 30.0% | |
| TTGCTACATTCTACATCTAT+TGG | + | chr4_4:51583433-51583452 | Msa0686950:three_prime_UTR | 30.0% | |
| TGCTACATTCTACATCTATT+GGG | + | chr4_4:51583434-51583453 | Msa0686950:three_prime_UTR | 30.0% | |
| GATCTTCAAGAGAAAGTAAA+TGG | - | chr4_4:51583544-51583563 | None:intergenic | 30.0% | |
| TGGAAATGGAAATGGATAAG+TGG | - | chr4_4:51578574-51578593 | None:intergenic | 35.0% | |
| ! | AGTGAGAGTGAGATTTTGTA+TGG | - | chr4_4:51578594-51578613 | None:intergenic | 35.0% |
| !! | TTAACGGAGTTTGATTTTGG+TGG | - | chr4_4:51578641-51578660 | None:intergenic | 35.0% |
| ! | TTTTTCCTTCCTTCCGATTT+CGG | + | chr4_4:51578815-51578834 | Msa0686950:intron | 35.0% |
| !! | CTTGTTTTCTTATGTCACAG+AGG | + | chr4_4:51579150-51579169 | Msa0686950:intron | 35.0% |
| TTGCTAGAAGTTGTAGAATG+GGG | + | chr4_4:51579291-51579310 | Msa0686950:intron | 35.0% | |
| ! | AATCGCTCGTTTGAAACAAT+GGG | - | chr4_4:51580481-51580500 | None:intergenic | 35.0% |
| ! | AAATCGCTCGTTTGAAACAA+TGG | - | chr4_4:51580480-51580499 | None:intergenic | 35.0% |
| ! | AATCGCTCGTTTGAAACAAT+GGG | - | chr4_4:51580481-51580500 | None:intergenic | 35.0% |
| ! | AAATCGCTCGTTTGAAACAA+TGG | - | chr4_4:51580480-51580499 | None:intergenic | 35.0% |
| CGCACAATTGGCAAAATATA+GGG | - | chr4_4:51580513-51580532 | None:intergenic | 35.0% | |
| TCGCACAATTGGCAAAATAT+AGG | - | chr4_4:51580512-51580531 | None:intergenic | 35.0% | |
| AATCAGAAAGGGGAAAACTA+TGG | + | chr4_4:51580451-51580470 | Msa0686950:intron | 35.0% | |
| ATCAGAAAGGGGAAAACTAT+GGG | + | chr4_4:51580452-51580471 | Msa0686950:intron | 35.0% | |
| ! | AAATCGCTCGTTTGAAACAA+TGG | + | chr4_4:51580480-51580499 | Msa0686950:intron | 35.0% |
| ! | AATCGCTCGTTTGAAACAAT+GGG | + | chr4_4:51580481-51580500 | Msa0686950:intron | 35.0% |
| TCGCACAATTGGCAAAATAT+AGG | + | chr4_4:51580512-51580531 | Msa0686950:intron | 35.0% | |
| CGCACAATTGGCAAAATATA+GGG | + | chr4_4:51580513-51580532 | Msa0686950:intron | 35.0% | |
| GCACAATTGGCAAAATATAG+GGG | + | chr4_4:51580514-51580533 | Msa0686950:intron | 35.0% | |
| CACAATTGGCAAAATATAGG+GGG | + | chr4_4:51580515-51580534 | Msa0686950:intron | 35.0% | |
| AAAGAGGTAAACAAGCACAA+GGG | - | chr4_4:51580670-51580689 | None:intergenic | 35.0% | |
| TAAAGAGGTAAACAAGCACA+AGG | - | chr4_4:51580671-51580690 | None:intergenic | 35.0% | |
| TACCCAAAGAAAAAAAGGGA+TGG | + | chr4_4:51580704-51580723 | Msa0686950:intron | 35.0% | |
| !!! | CAACCATCCCTTTTTTTCTT+TGG | - | chr4_4:51580710-51580729 | None:intergenic | 35.0% |
| ATGCTGTAATACTTTGTGTG+AGG | + | chr4_4:51580768-51580787 | Msa0686950:intron | 35.0% | |
| ATACTTTGTGTGAGGTTTCA+AGG | + | chr4_4:51580776-51580795 | Msa0686950:intron | 35.0% | |
| ! | GGTTTTTGACAAAGTTGTCA+AGG | + | chr4_4:51580797-51580816 | Msa0686950:intron | 35.0% |
| ATGCCTTGAATTAGGATAAG+GGG | + | chr4_4:51580828-51580847 | Msa0686950:intron | 35.0% | |
| AATCCCCTTATCCTAATTCA+AGG | - | chr4_4:51580834-51580853 | None:intergenic | 35.0% | |
| CTGTGATAAACCATTTGAAG+GGG | + | chr4_4:51580857-51580876 | Msa0686950:intron | 35.0% | |
| TGTGATAAACCATTTGAAGG+GGG | + | chr4_4:51580858-51580877 | Msa0686950:intron | 35.0% | |
| !!! | ATTAGTTTTCCCCCTTCAAA+TGG | - | chr4_4:51580870-51580889 | None:intergenic | 35.0% |
| ! | CAGTGTCATTGAAATGATTG+AGG | - | chr4_4:51581040-51581059 | None:intergenic | 35.0% |
| ! | ATCACGTTTTTGCCTAAGAA+AGG | - | chr4_4:51581086-51581105 | None:intergenic | 35.0% |
| !! | CTTGGTAGCTTTATGAAATC+TGG | + | chr4_4:51581123-51581142 | Msa0686950:intron | 35.0% |
| GAGATATTAGCCACTAAGTT+TGG | - | chr4_4:51581262-51581281 | None:intergenic | 35.0% | |
| ATCAGAATCAAGACAGTGAT+CGG | + | chr4_4:51581396-51581415 | Msa0686950:intron | 35.0% | |
| CGGTACATATTGAAATAGAG+AGG | + | chr4_4:51581454-51581473 | Msa0686950:intron | 35.0% | |
| TATTGAAATAGAGAGGAAGG+AGG | + | chr4_4:51581461-51581480 | Msa0686950:intron | 35.0% | |
| ! | TCAAAAGTATGTACCAGAGA+TGG | + | chr4_4:51581769-51581788 | Msa0686950:CDS | 35.0% |
| ! | CAAAAGTATGTACCAGAGAT+GGG | + | chr4_4:51581770-51581789 | Msa0686950:CDS | 35.0% |
| TACAACAGTTTCGTTCACTT+GGG | + | chr4_4:51581841-51581860 | Msa0686950:intron | 35.0% | |
| AACATGTCAATGCTATTGGT+AGG | + | chr4_4:51581976-51581995 | Msa0686950:intron | 35.0% | |
| ! | CCGTGATATCTTTTATCGTA+TGG | + | chr4_4:51582011-51582030 | Msa0686950:CDS | 35.0% |
| AAAGATATTGTTGCACTGTC+TGG | + | chr4_4:51582045-51582064 | Msa0686950:CDS | 35.0% | |
| AAGATATTGTTGCACTGTCT+GGG | + | chr4_4:51582046-51582065 | Msa0686950:CDS | 35.0% | |
| TGCTATTGGAAACCCATATT+TGG | - | chr4_4:51582584-51582603 | None:intergenic | 35.0% | |
| TGGAACTCATTGCATTAAGT+AGG | + | chr4_4:51582660-51582679 | Msa0686950:intron | 35.0% | |
| GATTTCCTACATGTGCTAAT+TGG | + | chr4_4:51582763-51582782 | Msa0686950:intron | 35.0% | |
| AGACCAACGTATTAAGTAGT+TGG | - | chr4_4:51582849-51582868 | None:intergenic | 35.0% | |
| TCTAATTCTAATTCTCCCTC+TGG | + | chr4_4:51583104-51583123 | Msa0686950:intron | 35.0% | |
| CATAAGAAACTTTCAGAGCT+TGG | + | chr4_4:51583166-51583185 | Msa0686950:CDS | 35.0% | |
| GTTATGATGCTGCTCATAAT+TGG | - | chr4_4:51583493-51583512 | None:intergenic | 35.0% | |
| TTTCTCTTGAAGATCGGAAA+AGG | + | chr4_4:51583549-51583568 | Msa0686950:three_prime_UTR | 35.0% | |
| TACTCTGAGTCTACTACTAC+CGG | - | chr4_4:51578675-51578694 | None:intergenic | 40.0% | |
| ! | AGTAGACTCAGAGTATCTCA+AGG | + | chr4_4:51578680-51578699 | Msa0686950:CDS | 40.0% |
| CGGAAGGAAGGAAAAAAACA+AGG | - | chr4_4:51578811-51578830 | None:intergenic | 40.0% | |
| CGAACGTAAGAAACCGAAAT+CGG | - | chr4_4:51578831-51578850 | None:intergenic | 40.0% | |
| TATGATGCAAAGACCAAGAC+CGG | + | chr4_4:51578914-51578933 | Msa0686950:CDS | 40.0% | |
| AATAGAACCATTAGGTCCAC+CGG | - | chr4_4:51578936-51578955 | None:intergenic | 40.0% | |
| ! | GTGGACCTAATGGTTCTATT+CGG | + | chr4_4:51578936-51578955 | Msa0686950:CDS | 40.0% |
| TCGTTCCGAATAGAACCATT+AGG | - | chr4_4:51578944-51578963 | None:intergenic | 40.0% | |
| ! | TAATGGTTCTATTCGGAACG+AGG | + | chr4_4:51578943-51578962 | Msa0686950:CDS | 40.0% |
| ! | AACGAGGAAGAGTTTTCTCA+TGG | + | chr4_4:51578959-51578978 | Msa0686950:CDS | 40.0% |
| TTATGTCACAGAGGAAGTGA+AGG | + | chr4_4:51579159-51579178 | Msa0686950:intron | 40.0% | |
| AGGTCTGCATATGAGATCTT+AGG | - | chr4_4:51579193-51579212 | None:intergenic | 40.0% | |
| CTCATATGCAGACCTTTATC+AGG | + | chr4_4:51579198-51579217 | Msa0686950:CDS | 40.0% | |
| TGCTACATTGTTTGTGACTC+TGG | + | chr4_4:51579403-51579422 | Msa0686950:intron | 40.0% | |
| ACTCTGGACACTCAAAACTT+TGG | + | chr4_4:51579419-51579438 | Msa0686950:intron | 40.0% | |
| CTCTGGACACTCAAAACTTT+GGG | + | chr4_4:51579420-51579439 | Msa0686950:intron | 40.0% | |
| ! | AGGGCACTAATCTAAGCAAA+GGG | - | chr4_4:51579575-51579594 | None:intergenic | 40.0% |
| GAAAGAGCTTGTGTGTAAGA+GGG | - | chr4_4:51579594-51579613 | None:intergenic | 40.0% | |
| TCGGAATTGTCATGCATCAT+GGG | - | chr4_4:51579619-51579638 | None:intergenic | 40.0% | |
| TTCGGAATTGTCATGCATCA+TGG | - | chr4_4:51579620-51579639 | None:intergenic | 40.0% | |
| ! | ATCGCTCGTTTGAAACAATG+GGG | - | chr4_4:51580482-51580501 | None:intergenic | 40.0% |
| ! | ATCGCTCGTTTGAAACAATG+GGG | - | chr4_4:51580482-51580501 | None:intergenic | 40.0% |
| TCAGAATGGGGGAAAACTAT+GGG | - | chr4_4:51579775-51579794 | None:intergenic | 40.0% | |
| ATCAGAATGGGGGAAAACTA+TGG | - | chr4_4:51579776-51579795 | None:intergenic | 40.0% | |
| TTGGGGTGCAAAATCAGAAT+GGG | - | chr4_4:51579788-51579807 | None:intergenic | 40.0% | |
| ! | TTTGGGGTGCAAAATCAGAA+TGG | - | chr4_4:51580439-51580458 | None:intergenic | 40.0% |
| ! | TTTGGGGTGCAAAATCAGAA+AGG | + | chr4_4:51580439-51580458 | Msa0686950:intron | 40.0% |
| TTGGGGTGCAAAATCAGAAA+GGG | + | chr4_4:51580440-51580459 | Msa0686950:intron | 40.0% | |
| TCAGAAAGGGGAAAACTATG+GGG | + | chr4_4:51580453-51580472 | Msa0686950:intron | 40.0% | |
| ! | ATCGCTCGTTTGAAACAATG+GGG | + | chr4_4:51580482-51580501 | Msa0686950:intron | 40.0% |
| GTCATTGAAATGATTGAGGC+AGG | - | chr4_4:51581036-51581055 | None:intergenic | 40.0% | |
| ACTACCAACAAGCCTTTCTT+AGG | + | chr4_4:51581071-51581090 | Msa0686950:intron | 40.0% | |
| TTTGCCTAAGAAAGGCTTGT+TGG | - | chr4_4:51581078-51581097 | None:intergenic | 40.0% | |
| TTGTTGCAGTTGAGGTTACT+GGG | + | chr4_4:51581629-51581648 | Msa0686950:CDS | 40.0% | |
| TCAACTTTGTTCCTGGAAGA+AGG | + | chr4_4:51581662-51581681 | Msa0686950:CDS | 40.0% | |
| CAACTTTGTTCCTGGAAGAA+GGG | + | chr4_4:51581663-51581682 | Msa0686950:CDS | 40.0% | |
| ! | AACACACCTTGTTTAGCATC+AGG | - | chr4_4:51581802-51581821 | None:intergenic | 40.0% |
| GTACAACAGTTTCGTTCACT+TGG | + | chr4_4:51581840-51581859 | Msa0686950:intron | 40.0% | |
| AGATATTGTTGCACTGTCTG+GGG | + | chr4_4:51582047-51582066 | Msa0686950:CDS | 40.0% | |
| TGCTTAAACTTCCAACAGAC+AGG | + | chr4_4:51582435-51582454 | Msa0686950:CDS | 40.0% | |
| GCTTAAACTTCCAACAGACA+GGG | + | chr4_4:51582436-51582455 | Msa0686950:CDS | 40.0% | |
| TCAACATAACGGCGAAATTC+AGG | - | chr4_4:51582476-51582495 | None:intergenic | 40.0% | |
| TCGCATACAGCTCAACATAA+CGG | - | chr4_4:51582487-51582506 | None:intergenic | 40.0% | |
| TTATGTTGAGCTGTATGCGA+AGG | + | chr4_4:51582487-51582506 | Msa0686950:CDS | 40.0% | |
| AGCTGTATGCGAAGGTAATT+GGG | + | chr4_4:51582495-51582514 | Msa0686950:intron | 40.0% | |
| TCCAAAGCACAATGCTTACT+GGG | - | chr4_4:51582703-51582722 | None:intergenic | 40.0% | |
| AACATCGTGATAATCGCAGA+TGG | - | chr4_4:51582737-51582756 | None:intergenic | 40.0% | |
| AGATATGAGCTCTTTCTACC+TGG | + | chr4_4:51582823-51582842 | Msa0686950:intron | 40.0% | |
| AACGTATTAAGTAGTTGGCC+AGG | - | chr4_4:51582844-51582863 | None:intergenic | 40.0% | |
| TGGCCAACTACTTAATACGT+TGG | + | chr4_4:51582843-51582862 | Msa0686950:intron | 40.0% | |
| !! | TTGGCATGAATGTTTTGGGT+AGG | - | chr4_4:51582959-51582978 | None:intergenic | 40.0% |
| GAGTTTCATACAAGTAACCG+AGG | - | chr4_4:51583285-51583304 | None:intergenic | 40.0% | |
| TTTGATCTGTTCAGCTCTGT+TGG | + | chr4_4:51583324-51583343 | Msa0686950:three_prime_UTR | 40.0% | |
| AACCCAATACTGCTCGTTAT+GGG | - | chr4_4:51583367-51583386 | None:intergenic | 40.0% | |
| TAGTGAATGCCTGAATGGGT+GGG | - | chr4_4:51578551-51578570 | None:intergenic | 45.0% | |
| ! | GTGGTAGTGAATGCCTGAAT+GGG | - | chr4_4:51578555-51578574 | None:intergenic | 45.0% |
| ! | AGTGGTAGTGAATGCCTGAA+TGG | - | chr4_4:51578556-51578575 | None:intergenic | 45.0% |
| ACTCTGAGTCTACTACTACC+GGG | - | chr4_4:51578674-51578693 | None:intergenic | 45.0% | |
| TTACGCTAAGCGAAGCATGA+GGG | - | chr4_4:51578763-51578782 | None:intergenic | 45.0% | |
| TCATGCTTCGCTTAGCGTAA+GGG | + | chr4_4:51578763-51578782 | Msa0686950:intron | 45.0% | |
| AGAAACCGAAATCGGAAGGA+AGG | - | chr4_4:51578823-51578842 | None:intergenic | 45.0% | |
| CGTAAGAAACCGAAATCGGA+AGG | - | chr4_4:51578827-51578846 | None:intergenic | 45.0% | |
| ! | GTTTTTCGTGCAGTGTTAGC+TGG | + | chr4_4:51579459-51579478 | Msa0686950:intron | 45.0% |
| !! | GAGGGCACTAATCTAAGCAA+AGG | - | chr4_4:51579576-51579595 | None:intergenic | 45.0% |
| GGAAAGAGCTTGTGTGTAAG+AGG | - | chr4_4:51579595-51579614 | None:intergenic | 45.0% | |
| GAATTGTCATGCATCATGGG+AGG | - | chr4_4:51579616-51579635 | None:intergenic | 45.0% | |
| GGGGTACAAAATCGCACAAT+TGG | - | chr4_4:51579755-51579774 | None:intergenic | 45.0% | |
| CAGAATGGGGGAAAACTATG+GGG | - | chr4_4:51579774-51579793 | None:intergenic | 45.0% | |
| TGGGGTGCAAAATCAGAATG+GGG | - | chr4_4:51579787-51579806 | None:intergenic | 45.0% | |
| TGGGGTGCAAAATCAGAAAG+GGG | + | chr4_4:51580441-51580460 | Msa0686950:intron | 45.0% | |
| !! | GCTTGTTGGTAGTATGAAGC+AGG | - | chr4_4:51581064-51581083 | None:intergenic | 45.0% |
| CATGTAATCTATGACGCAGC+TGG | - | chr4_4:51581559-51581578 | None:intergenic | 45.0% | |
| GTTGTTGCAGTTGAGGTTAC+TGG | + | chr4_4:51581628-51581647 | Msa0686950:CDS | 45.0% | |
| TGTTGCAGTTGAGGTTACTG+GGG | + | chr4_4:51581630-51581649 | Msa0686950:CDS | 45.0% | |
| CCAGGAACAAAGTTGACTGT+GGG | - | chr4_4:51581658-51581677 | None:intergenic | 45.0% | |
| TCCAGGAACAAAGTTGACTG+TGG | - | chr4_4:51581659-51581678 | None:intergenic | 45.0% | |
| AAGTATGTACCAGAGATGGG+CGG | + | chr4_4:51581773-51581792 | Msa0686950:CDS | 45.0% | |
| GAAAATCCTTTCACAGGCAG+TGG | - | chr4_4:51581883-51581902 | None:intergenic | 45.0% | |
| ! | TCCAACAGACAGGGCTTTAT+TGG | + | chr4_4:51582445-51582464 | Msa0686950:CDS | 45.0% |
| TCCAATAAAGCCCTGTCTGT+TGG | - | chr4_4:51582449-51582468 | None:intergenic | 45.0% | |
| GAGCTGTATGCGAAGGTAAT+TGG | + | chr4_4:51582494-51582513 | Msa0686950:intron | 45.0% | |
| AAGCACAATGCTTACTGGGA+AGG | - | chr4_4:51582699-51582718 | None:intergenic | 45.0% | |
| ! | TCCCAGTAAGCATTGTGCTT+TGG | + | chr4_4:51582699-51582718 | Msa0686950:intron | 45.0% |
| CTCCAAAGCACAATGCTTAC+TGG | - | chr4_4:51582704-51582723 | None:intergenic | 45.0% | |
| TCCTACATGTGCTAATTGGG+TGG | + | chr4_4:51582767-51582786 | Msa0686950:intron | 45.0% | |
| TCCACCCAATTAGCACATGT+AGG | - | chr4_4:51582771-51582790 | None:intergenic | 45.0% | |
| ATTCTAATTCTCCCTCTGGC+AGG | + | chr4_4:51583108-51583127 | Msa0686950:intron | 45.0% | |
| !! | AAAAGCGCTTTGTGCCAGTA+CGG | - | chr4_4:51583233-51583252 | None:intergenic | 45.0% |
| GAACCCAATACTGCTCGTTA+TGG | - | chr4_4:51583368-51583387 | None:intergenic | 45.0% | |
| CTCTTGAAGATCGGAAAAGG+AGG | + | chr4_4:51583552-51583571 | Msa0686950:three_prime_UTR | 45.0% | |
| !!! | TTCTAATTTTTTAAATTTTT+TGG | - | chr4_4:51579838-51579857 | None:intergenic | 5.0% |
| !!! | AAATTTAATTTTTAAAAATC+TGG | + | chr4_4:51580030-51580049 | Msa0686950:intron | 5.0% |
| !!! | ATTTTCAAAATTTTAAAAAA+AGG | - | chr4_4:51580313-51580332 | None:intergenic | 5.0% |
| TATCAACCACCCACCCATTC+AGG | + | chr4_4:51578539-51578558 | Msa0686950:five_prime_UTR | 50.0% | |
| GTAGTGAATGCCTGAATGGG+TGG | - | chr4_4:51578552-51578571 | None:intergenic | 50.0% | |
| TCCGTTAACAATGGCGTTCC+CGG | + | chr4_4:51578653-51578672 | Msa0686950:exon | 50.0% | |
| ACCGGGAACGCCATTGTTAA+CGG | - | chr4_4:51578657-51578676 | None:intergenic | 50.0% | |
| TTCTGTTGGCGATGAGAGCA+CGG | - | chr4_4:51578731-51578750 | None:intergenic | 50.0% | |
| TACGCTAAGCGAAGCATGAG+GGG | - | chr4_4:51578762-51578781 | None:intergenic | 50.0% | |
| CTTACGCTAAGCGAAGCATG+AGG | - | chr4_4:51578764-51578783 | None:intergenic | 50.0% | |
| CTCATGCTTCGCTTAGCGTA+AGG | + | chr4_4:51578762-51578781 | Msa0686950:intron | 50.0% | |
| GGGGTGCAAAATCAGAATGG+GGG | - | chr4_4:51579786-51579805 | None:intergenic | 50.0% | |
| GGGGTGCAAAATCGCACAAT+TGG | + | chr4_4:51580501-51580520 | Msa0686950:intron | 50.0% | |
| ! | CAAGCTGGAAGCACAAAGGA+AGG | - | chr4_4:51581603-51581622 | None:intergenic | 50.0% |
| TCCTTTGTGCTTCCAGCTTG+CGG | + | chr4_4:51581603-51581622 | Msa0686950:intron | 50.0% | |
| GTTGCAGTTGAGGTTACTGG+GGG | + | chr4_4:51581631-51581650 | Msa0686950:CDS | 50.0% | |
| CCCACAGTCAACTTTGTTCC+TGG | + | chr4_4:51581655-51581674 | Msa0686950:CDS | 50.0% | |
| GCACAACATACCCTTCTTCC+AGG | - | chr4_4:51581676-51581695 | None:intergenic | 50.0% | |
| CGGCTTCCTGATGCTAAACA+AGG | + | chr4_4:51581793-51581812 | Msa0686950:CDS | 50.0% | |
| CAGTTTCGTTCACTTGGGCA+TGG | + | chr4_4:51581846-51581865 | Msa0686950:intron | 50.0% | |
| AGCTTACCACTGCCTGTGAA+AGG | + | chr4_4:51581874-51581893 | Msa0686950:intron | 50.0% | |
| AGAGCACATCCAGAGAGATC+CGG | + | chr4_4:51582163-51582182 | Msa0686950:CDS | 50.0% | |
| TGTCCAAGGACCATCAAACC+CGG | - | chr4_4:51582185-51582204 | None:intergenic | 50.0% | |
| ! | GTTTGATGGTCCTTGGACAG+AGG | + | chr4_4:51582186-51582205 | Msa0686950:CDS | 50.0% |
| ! | TGGCTTTGCACCAAGCTCAA+AGG | + | chr4_4:51583186-51583205 | Msa0686950:CDS | 50.0% |
| !! | GTACTGGCACAAAGCGCTTT+TGG | + | chr4_4:51583232-51583251 | Msa0686950:CDS | 50.0% |
| TGTTGGATGTCACGTCTGTG+TGG | + | chr4_4:51583341-51583360 | Msa0686950:three_prime_UTR | 50.0% | |
| TGGCCCATAACGAGCAGTAT+TGG | + | chr4_4:51583361-51583380 | Msa0686950:three_prime_UTR | 50.0% | |
| GGCCCATAACGAGCAGTATT+GGG | + | chr4_4:51583362-51583381 | Msa0686950:three_prime_UTR | 50.0% | |
| GCAAGATCCACGTGTCAGTC+AGG | + | chr4_4:51578459-51578478 | Msa0686950:five_prime_UTR | 55.0% | |
| CTCTTCACCTGACTGACACG+TGG | - | chr4_4:51578469-51578488 | None:intergenic | 55.0% | |
| TGAATGCCTGAATGGGTGGG+TGG | - | chr4_4:51578548-51578567 | None:intergenic | 55.0% | |
| ! | GAGGGGAGCACAGTTTCTGT+TGG | - | chr4_4:51578745-51578764 | None:intergenic | 55.0% |
| TGATTCAGGTGGCACGATGC+TGG | + | chr4_4:51578887-51578906 | Msa0686950:intron | 55.0% | |
| GATGCAAAGACCAAGACCGG+TGG | + | chr4_4:51578917-51578936 | Msa0686950:CDS | 55.0% | |
| ACCAAGACCGGTGGACCTAA+TGG | + | chr4_4:51578926-51578945 | Msa0686950:CDS | 55.0% | |
| ACCATTAGGTCCACCGGTCT+TGG | - | chr4_4:51578930-51578949 | None:intergenic | 55.0% | |
| CCTTTGTGCTTCCAGCTTGC+GGG | + | chr4_4:51581604-51581623 | Msa0686950:intron | 55.0% | |
| !! | TGCGGGTGTTGTTGCAGTTG+AGG | + | chr4_4:51581621-51581640 | Msa0686950:CDS | 55.0% |
| GAGCACATCCAGAGAGATCC+GGG | + | chr4_4:51582164-51582183 | Msa0686950:CDS | 55.0% | |
| CCATCAAACCCGGATCTCTC+TGG | - | chr4_4:51582175-51582194 | None:intergenic | 55.0% | |
| CCAGAGAGATCCGGGTTTGA+TGG | + | chr4_4:51582172-51582191 | Msa0686950:CDS | 55.0% | |
| ! | GATCCGGGTTTGATGGTCCT+TGG | + | chr4_4:51582179-51582198 | Msa0686950:CDS | 55.0% |
| TTCAGAGGGTCCTCTGTCCA+AGG | - | chr4_4:51582199-51582218 | None:intergenic | 55.0% | |
| ATTCTCCCTCTGGCAGGATG+AGG | + | chr4_4:51583114-51583133 | Msa0686950:intron | 55.0% | |
| TGCATCCTCATCCTGCCAGA+GGG | - | chr4_4:51583122-51583141 | None:intergenic | 55.0% | |
| ATGCATCCTCATCCTGCCAG+AGG | - | chr4_4:51583123-51583142 | None:intergenic | 55.0% | |
| GGAGCAGTTGCCTTTGAGCT+TGG | - | chr4_4:51583199-51583218 | None:intergenic | 55.0% | |
| CTCAAAGGCAACTGCTCCTG+TGG | + | chr4_4:51583201-51583220 | Msa0686950:CDS | 55.0% | |
| TCCTGTGGATGCAACCGTAC+TGG | + | chr4_4:51583216-51583235 | Msa0686950:CDS | 55.0% | |
| ! | CCCGCAAGCTGGAAGCACAA+AGG | - | chr4_4:51581607-51581626 | None:intergenic | 60.0% |
| CTGCAACAACACCCGCAAGC+TGG | - | chr4_4:51581618-51581637 | None:intergenic | 60.0% | |
| ATCAGGAAGCCGCCCATCTC+TGG | - | chr4_4:51581785-51581804 | None:intergenic | 60.0% | |
| ! | ACTGTCTGGGGCACATACGC+TGG | + | chr4_4:51582059-51582078 | Msa0686950:CDS | 60.0% |
| GCCAGTACGGTTGCATCCAC+AGG | - | chr4_4:51583220-51583239 | None:intergenic | 60.0% | |
| AGTTGTAGCTGCCGCTGCAG+TGG | + | chr4_4:51583255-51583274 | Msa0686950:CDS | 60.0% | |
| ACCGAGGATCACCACTGCAG+CGG | - | chr4_4:51583269-51583288 | None:intergenic | 60.0% | |
| GCCGCTGCAGTGGTGATCCT+CGG | + | chr4_4:51583265-51583284 | Msa0686950:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 51578452 | 51583686 | 51578452 | ID=Msa0686950;Name=Msa0686950 |
| chr4_4 | mRNA | 51578452 | 51583686 | 51578452 | ID=Msa0686950-mRNA-1;Parent=Msa0686950;Name=Msa0686950-mRNA-1;_AED=0.10;_eAED=0.10;_QI=211|1|1|1|1|1|9|365|287 |
| chr4_4 | exon | 51578452 | 51578778 | 51578452 | ID=Msa0686950-mRNA-1:exon:13326;Parent=Msa0686950-mRNA-1 |
| chr4_4 | exon | 51578895 | 51579019 | 51578895 | ID=Msa0686950-mRNA-1:exon:13327;Parent=Msa0686950-mRNA-1 |
| chr4_4 | exon | 51579170 | 51579219 | 51579170 | ID=Msa0686950-mRNA-1:exon:13328;Parent=Msa0686950-mRNA-1 |
| chr4_4 | exon | 51581619 | 51581684 | 51581619 | ID=Msa0686950-mRNA-1:exon:13329;Parent=Msa0686950-mRNA-1 |
| chr4_4 | exon | 51581766 | 51581814 | 51581766 | ID=Msa0686950-mRNA-1:exon:13330;Parent=Msa0686950-mRNA-1 |
| chr4_4 | exon | 51581998 | 51582080 | 51581998 | ID=Msa0686950-mRNA-1:exon:13331;Parent=Msa0686950-mRNA-1 |
| chr4_4 | exon | 51582160 | 51582239 | 51582160 | ID=Msa0686950-mRNA-1:exon:13332;Parent=Msa0686950-mRNA-1 |
| chr4_4 | exon | 51582406 | 51582508 | 51582406 | ID=Msa0686950-mRNA-1:exon:13333;Parent=Msa0686950-mRNA-1 |
| chr4_4 | exon | 51583130 | 51583686 | 51583130 | ID=Msa0686950-mRNA-1:exon:13334;Parent=Msa0686950-mRNA-1 |
| chr4_4 | five_prime_UTR | 51578452 | 51578662 | 51578452 | ID=Msa0686950-mRNA-1:five_prime_utr;Parent=Msa0686950-mRNA-1 |
| chr4_4 | CDS | 51578663 | 51578778 | 51578663 | ID=Msa0686950-mRNA-1:cds;Parent=Msa0686950-mRNA-1 |
| chr4_4 | CDS | 51578895 | 51579019 | 51578895 | ID=Msa0686950-mRNA-1:cds;Parent=Msa0686950-mRNA-1 |
| chr4_4 | CDS | 51579170 | 51579219 | 51579170 | ID=Msa0686950-mRNA-1:cds;Parent=Msa0686950-mRNA-1 |
| chr4_4 | CDS | 51581619 | 51581684 | 51581619 | ID=Msa0686950-mRNA-1:cds;Parent=Msa0686950-mRNA-1 |
| chr4_4 | CDS | 51581766 | 51581814 | 51581766 | ID=Msa0686950-mRNA-1:cds;Parent=Msa0686950-mRNA-1 |
| chr4_4 | CDS | 51581998 | 51582080 | 51581998 | ID=Msa0686950-mRNA-1:cds;Parent=Msa0686950-mRNA-1 |
| chr4_4 | CDS | 51582160 | 51582239 | 51582160 | ID=Msa0686950-mRNA-1:cds;Parent=Msa0686950-mRNA-1 |
| chr4_4 | CDS | 51582406 | 51582508 | 51582406 | ID=Msa0686950-mRNA-1:cds;Parent=Msa0686950-mRNA-1 |
| chr4_4 | CDS | 51583130 | 51583321 | 51583130 | ID=Msa0686950-mRNA-1:cds;Parent=Msa0686950-mRNA-1 |
| chr4_4 | three_prime_UTR | 51583322 | 51583686 | 51583322 | ID=Msa0686950-mRNA-1:three_prime_utr;Parent=Msa0686950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
