Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0639010 | XP_013457187.1 | 97.862 | 1029 | 22 | 0 | 1 | 1029 | 1 | 1029 | 0.0 | 2106 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0639010 | sp|Q6NPP4|CMTA2_ARATH | 50.235 | 1065 | 439 | 21 | 1 | 1010 | 1 | 1029 | 0.0 | 983 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0639010 | A0A072UQ84 | 97.862 | 1029 | 22 | 0 | 1 | 1029 | 1 | 1029 | 0.0 | 2106 |
Gene ID | Type | Classification |
---|---|---|
Msa0639010 | TF | CAMTA |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0614380 | Msa0639010 | 0.847991 | 8.144383e-60 | -8.615850e-47 |
Msa0639010 | Msa0697590 | 0.833425 | 5.371457e-56 | -8.615850e-47 |
Msa0639010 | Msa0758850 | 0.803486 | 3.407563e-49 | -8.615850e-47 |
Msa0639010 | Msa0935840 | -0.805336 | 1.402358e-49 | -8.615850e-47 |
Msa0639010 | Msa0945030 | 0.800341 | 1.508411e-48 | -8.615850e-47 |
Msa0639010 | Msa1031460 | 0.800446 | 1.436041e-48 | -8.615850e-47 |
Msa0639010 | Msa1207890 | 0.830606 | 2.672177e-55 | -8.615850e-47 |
Msa0480930 | Msa0639010 | 0.852010 | 6.109958e-61 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0639010 | MtrunA17_Chr4g0050401 | 97.862 | 1029 | 22 | 0 | 1 | 1029 | 1 | 1029 | 0.0 | 2106 |
Msa0639010 | MtrunA17_Chr2g0279141 | 62.673 | 1085 | 304 | 14 | 1 | 1029 | 1 | 1040 | 0.0 | 1311 |
Msa0639010 | MtrunA17_Chr8g0382191 | 42.349 | 1124 | 492 | 27 | 12 | 1027 | 8 | 1083 | 0.0 | 788 |
Msa0639010 | MtrunA17_Chr8g0377501 | 38.325 | 621 | 311 | 17 | 426 | 1023 | 396 | 967 | 2.41e-119 | 389 |
Msa0639010 | MtrunA17_Chr8g0377501 | 50.641 | 156 | 70 | 1 | 14 | 169 | 15 | 163 | 8.01e-43 | 169 |
Msa0639010 | MtrunA17_Chr3g0122351 | 38.850 | 574 | 299 | 13 | 426 | 984 | 375 | 911 | 4.09e-100 | 337 |
Msa0639010 | MtrunA17_Chr3g0122351 | 47.445 | 137 | 72 | 0 | 10 | 146 | 4 | 140 | 6.75e-37 | 150 |
Msa0639010 | MtrunA17_Chr2g0294711 | 32.432 | 629 | 350 | 18 | 384 | 981 | 302 | 886 | 4.92e-79 | 277 |
Msa0639010 | MtrunA17_Chr2g0294711 | 55.645 | 124 | 55 | 0 | 13 | 136 | 25 | 148 | 1.92e-37 | 152 |
Msa0639010 | MtrunA17_Chr4g0068161 | 32.143 | 616 | 364 | 15 | 386 | 981 | 316 | 897 | 5.23e-77 | 272 |
Msa0639010 | MtrunA17_Chr4g0068161 | 54.839 | 124 | 56 | 0 | 13 | 136 | 25 | 148 | 1.35e-30 | 130 |
Msa0639010 | MtrunA17_Chr8g0382181 | 31.496 | 508 | 283 | 12 | 55 | 537 | 8 | 475 | 9.08e-68 | 235 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0639010 | AT5G64220.1 | 50.235 | 1065 | 439 | 21 | 1 | 1010 | 1 | 1029 | 0.0 | 983 |
Msa0639010 | AT5G64220.2 | 50.235 | 1065 | 439 | 21 | 1 | 1010 | 1 | 1029 | 0.0 | 983 |
Msa0639010 | AT5G09410.2 | 51.338 | 1046 | 420 | 26 | 11 | 1024 | 14 | 1002 | 0.0 | 970 |
Msa0639010 | AT5G09410.1 | 50.478 | 1046 | 411 | 26 | 11 | 1024 | 14 | 984 | 0.0 | 948 |
Msa0639010 | AT5G09410.4 | 49.093 | 937 | 388 | 26 | 120 | 1024 | 2 | 881 | 0.0 | 798 |
Msa0639010 | AT2G22300.2 | 43.188 | 1035 | 477 | 25 | 13 | 993 | 13 | 990 | 0.0 | 747 |
Msa0639010 | AT2G22300.1 | 43.188 | 1035 | 477 | 25 | 13 | 993 | 13 | 990 | 0.0 | 747 |
Msa0639010 | AT5G09410.3 | 57.534 | 657 | 259 | 13 | 382 | 1024 | 411 | 1061 | 0.0 | 732 |
Msa0639010 | AT5G09410.3 | 52.778 | 216 | 54 | 4 | 11 | 195 | 73 | 271 | 4.86e-57 | 215 |
Msa0639010 | AT2G22300.3 | 42.164 | 989 | 461 | 25 | 59 | 993 | 1 | 932 | 0.0 | 685 |
Msa0639010 | AT1G67310.1 | 37.807 | 611 | 344 | 11 | 420 | 1015 | 419 | 1008 | 7.93e-102 | 343 |
Msa0639010 | AT1G67310.1 | 48.000 | 125 | 65 | 0 | 11 | 135 | 34 | 158 | 2.22e-35 | 146 |
Msa0639010 | AT3G16940.3 | 31.655 | 556 | 342 | 10 | 436 | 981 | 274 | 801 | 9.15e-74 | 261 |
Msa0639010 | AT3G16940.3 | 53.906 | 128 | 59 | 0 | 21 | 148 | 4 | 131 | 6.56e-36 | 147 |
Msa0639010 | AT3G16940.1 | 31.655 | 556 | 342 | 10 | 436 | 981 | 301 | 828 | 1.65e-73 | 261 |
Msa0639010 | AT3G16940.1 | 52.206 | 136 | 65 | 0 | 13 | 148 | 23 | 158 | 1.08e-36 | 150 |
Msa0639010 | AT3G16940.2 | 30.065 | 459 | 291 | 9 | 436 | 884 | 301 | 739 | 3.19e-48 | 184 |
Msa0639010 | AT3G16940.2 | 52.206 | 136 | 65 | 0 | 13 | 148 | 23 | 158 | 6.13e-37 | 150 |
Find 281 sgRNAs with CRISPR-Local
Find 626 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAAACCTGAAATTCCTTTC+TGG | 0.183571 | 4_3:+34654844 | None:intergenic |
ACCATACAGGTGTTGATTAT+TGG | 0.185292 | 4_3:-34656110 | Msa0639010:intron |
CCATGGACTTAACCCTTAAA+AGG | 0.206382 | 4_3:+34653937 | None:intergenic |
GGAAGGCTGGTTGGTTGGTT+GGG | 0.230610 | 4_3:+34654029 | None:intergenic |
CTGTATTGGGCCCGAGCTTC+TGG | 0.238171 | 4_3:+34653906 | None:intergenic |
GTCTCCATGGGTGCAGCTGC+TGG | 0.249458 | 4_3:-34654936 | Msa0639010:CDS |
ATTTCCAGAGGCGAAGTTAT+TGG | 0.262144 | 4_3:-34660023 | Msa0639010:CDS |
AGGTTGACAGCTTCTCTAAA+TGG | 0.265479 | 4_3:-34656605 | Msa0639010:CDS |
AATAGGTCAGGATCAATTTC+TGG | 0.268880 | 4_3:+34656717 | None:intergenic |
TTGCTGCTCTTGGTTATGAT+TGG | 0.275206 | 4_3:-34655524 | Msa0639010:CDS |
TTATGTGAAGATGCTGATTC+AGG | 0.276888 | 4_3:-34658352 | Msa0639010:intron |
GAAGAGGATGATGAGGAGTT+TGG | 0.278551 | 4_3:-34654558 | Msa0639010:CDS |
GACTGAGTAAAGCTCCATTT+TGG | 0.278754 | 4_3:+34656813 | None:intergenic |
TAACATGCGTTCAAGAAATA+TGG | 0.284948 | 4_3:-34658407 | Msa0639010:CDS |
ACCTAATCGAAGAGCCATTT+CGG | 0.289822 | 4_3:+34662166 | None:intergenic |
ATGACATAGAACTGCCCTTT+TGG | 0.289844 | 4_3:+34658452 | None:intergenic |
TGACGCACAGACTGCTCTTT+TGG | 0.290623 | 4_3:+34656678 | None:intergenic |
GAATCAGCATAAGCCCATTT+AGG | 0.291998 | 4_3:+34656432 | None:intergenic |
GATGGCACAAAAGAAACTTT+AGG | 0.301408 | 4_3:-34654762 | Msa0639010:CDS |
TTGGTTGGGGACCTTATTAA+TGG | 0.314186 | 4_3:+34654043 | None:intergenic |
ATGCGGGCGGATTTCCAAAA+TGG | 0.320508 | 4_3:-34656827 | Msa0639010:CDS |
TCCGTCTGTGGACCATTTCC+CGG | 0.320563 | 4_3:+34658088 | None:intergenic |
GATGGCCAGAAAGGAATTTC+AGG | 0.321998 | 4_3:-34654849 | Msa0639010:CDS |
TTCCGCTGAACTACTGGGTT+TGG | 0.324534 | 4_3:-34656763 | Msa0639010:CDS |
AGCTGATGGTGTGGAGGATT+TGG | 0.325559 | 4_3:-34653715 | Msa0639010:CDS |
CACAGTCTCTGCAATCAAAT+TGG | 0.329502 | 4_3:-34657682 | Msa0639010:CDS |
AAATTACCTCCCACTTGTTC+AGG | 0.329825 | 4_3:-34657864 | Msa0639010:CDS |
ATTTGCTTGTAGTGAAGTTC+AGG | 0.330996 | 4_3:-34655925 | Msa0639010:CDS |
CCTAATCGAAGAGCCATTTC+GGG | 0.334256 | 4_3:+34662167 | None:intergenic |
TAACCCTTAAAAGGGCCTTT+TGG | 0.340909 | 4_3:+34653946 | None:intergenic |
GCTTCTAAGTCAACCAAATC+TGG | 0.342389 | 4_3:-34654504 | Msa0639010:CDS |
ACCCTCCCCATGTCCAGATT+TGG | 0.344090 | 4_3:+34654491 | None:intergenic |
TAACTATTCCGCTGAACTAC+TGG | 0.345530 | 4_3:-34656769 | Msa0639010:CDS |
CTTCACAAAGTAACTGAAAC+TGG | 0.348831 | 4_3:-34655597 | Msa0639010:CDS |
AAGACAGACATTGAACTTGA+TGG | 0.351590 | 4_3:+34657722 | None:intergenic |
GAAGGCTGGTTGGTTGGTTG+GGG | 0.353127 | 4_3:+34654030 | None:intergenic |
AATCTTCCCCTGATATTTCA+TGG | 0.362888 | 4_3:-34656545 | Msa0639010:CDS |
TGCTGCTCTTGGTTATGATT+GGG | 0.363320 | 4_3:-34655523 | Msa0639010:CDS |
TCGATCAGATGCCATTAATA+AGG | 0.366625 | 4_3:-34654054 | Msa0639010:CDS |
TTACCTGGTGACCTCTTACA+TGG | 0.367157 | 4_3:+34654168 | None:intergenic |
GGAAAAGAATTGGATGATAC+AGG | 0.367538 | 4_3:+34657743 | None:intergenic |
TGAACTTGATGGAAAAGAAT+TGG | 0.370030 | 4_3:+34657733 | None:intergenic |
GTCCTGTATGTTTGGGGAAG+TGG | 0.371591 | 4_3:-34656045 | Msa0639010:CDS |
AAAGAAGTTAAAGTGCTTGT+TGG | 0.371798 | 4_3:+34658373 | None:intergenic |
TTACGCCCTGCAGAGATATT+AGG | 0.372239 | 4_3:-34660940 | Msa0639010:CDS |
ACACCTGCTGATCTTGCTTC+TGG | 0.372383 | 4_3:-34654873 | Msa0639010:CDS |
GCTCAAAATCAAAAGAAAAT+AGG | 0.374943 | 4_3:+34656700 | None:intergenic |
CATTTAGCAGACGCCTGTAT+TGG | 0.375253 | 4_3:+34653892 | None:intergenic |
TCCGCTGAACTACTGGGTTT+GGG | 0.377091 | 4_3:-34656762 | Msa0639010:CDS |
TGTAGCTGGTCCTGTATGTT+TGG | 0.377603 | 4_3:-34656053 | Msa0639010:CDS |
CCCGAAATGGCTCTTCGATT+AGG | 0.378336 | 4_3:-34662167 | Msa0639010:intron |
CTGGGTTTGGGTAAAGAAAC+TGG | 0.378745 | 4_3:-34656750 | Msa0639010:CDS |
TGTCCACTACTTGGATGTTA+AGG | 0.380969 | 4_3:-34659675 | Msa0639010:intron |
TCTGGCTTTCCTGCAAATTA+CGG | 0.383525 | 4_3:-34658430 | Msa0639010:CDS |
CCATGTCCAGCATTCCCTTC+AGG | 0.383542 | 4_3:-34654900 | Msa0639010:CDS |
CTTTACTAGAAATGTAGATT+TGG | 0.384536 | 4_3:-34655883 | Msa0639010:CDS |
GGCATTCGATTGATCCTTTG+CGG | 0.385462 | 4_3:-34653649 | Msa0639010:exon |
CATTTGGTCCGTGGGAATCC+TGG | 0.387080 | 4_3:-34654126 | Msa0639010:CDS |
CGCATGTTACCGTAATTTGC+AGG | 0.387863 | 4_3:+34658421 | None:intergenic |
GTAGCTGGTCCTGTATGTTT+GGG | 0.391436 | 4_3:-34656052 | Msa0639010:CDS |
TTCACTACAAGCAAATCTAT+TGG | 0.391533 | 4_3:+34655932 | None:intergenic |
CTTTCATGAGTTGCATAATC+CGG | 0.391682 | 4_3:-34658107 | Msa0639010:CDS |
ATGGCACAAAAGAAACTTTA+GGG | 0.395086 | 4_3:-34654761 | Msa0639010:CDS |
CTACATTTAGTTGCTGCTCT+TGG | 0.400628 | 4_3:-34655534 | Msa0639010:CDS |
TCCGTGCCCCATGAAATATC+AGG | 0.400653 | 4_3:+34656537 | None:intergenic |
GAATTGCAACGCCTGTGCAC+TGG | 0.401573 | 4_3:-34654710 | Msa0639010:CDS |
TATCTTTCATAGGCAGGTTA+AGG | 0.405053 | 4_3:-34655640 | Msa0639010:CDS |
TCTCTGACCCTCGTTTGAAT+TGG | 0.406378 | 4_3:+34657832 | None:intergenic |
ATTCCCACGGACCAAATGAT+TGG | 0.406432 | 4_3:+34654131 | None:intergenic |
ATTTAGCAGACGCCTGTATT+GGG | 0.411016 | 4_3:+34653893 | None:intergenic |
AATTGCAACGCCTGTGCACT+GGG | 0.412088 | 4_3:-34654709 | Msa0639010:CDS |
CGCTCCAGCAGCTGCACCCA+TGG | 0.413239 | 4_3:+34654932 | None:intergenic |
TAATCTGAGTTCGATAAATT+CGG | 0.414296 | 4_3:-34653745 | Msa0639010:CDS |
AAGAAGTTAAAGTGCTTGTT+GGG | 0.415064 | 4_3:+34658374 | None:intergenic |
AGAAGTACAAACCAATCATT+TGG | 0.419166 | 4_3:-34654142 | Msa0639010:CDS |
GGTTGCTCTCCTTGTCTCCA+TGG | 0.421375 | 4_3:-34654949 | Msa0639010:CDS |
CCTCATGTGTTTGGTAAAGA+TGG | 0.422095 | 4_3:-34655567 | Msa0639010:CDS |
TGAAGGCACATATCTTTCAT+AGG | 0.423985 | 4_3:-34655650 | Msa0639010:CDS |
TATAGTATTTGTCCACTACT+TGG | 0.426647 | 4_3:-34659684 | Msa0639010:CDS |
GGGAAGGCTGGTTGGTTGGT+TGG | 0.428381 | 4_3:+34654028 | None:intergenic |
CTGCCGGGTAGTGTATTAAC+AGG | 0.435270 | 4_3:+34653608 | None:intergenic |
ACTGGAGGAGTTACTTACTT+TGG | 0.436854 | 4_3:-34655817 | Msa0639010:CDS |
GCCAGATGCTATATGCCTTA+AGG | 0.440387 | 4_3:-34654679 | Msa0639010:CDS |
CAGCGGCTTGTGTAGCATTA+CGG | 0.442930 | 4_3:+34654640 | None:intergenic |
CAGAAGCTCGGGCCCAATAC+AGG | 0.444672 | 4_3:-34653905 | Msa0639010:CDS |
GGTAAAGGGCCTCATGTGTT+TGG | 0.444881 | 4_3:-34655576 | Msa0639010:CDS |
CAAGCTCCACCTCATGAGAT+TGG | 0.446603 | 4_3:-34655981 | Msa0639010:CDS |
GGCACATATCTTTCATAGGC+AGG | 0.447036 | 4_3:-34655646 | Msa0639010:CDS |
TAAAGTGCTTGTTGGGCTCA+TGG | 0.450539 | 4_3:+34658381 | None:intergenic |
AATGTCATGGATAAATCTTC+AGG | 0.452873 | 4_3:-34657785 | Msa0639010:CDS |
TAGAAAATACCTTGGTTTGA+CGG | 0.454767 | 4_3:+34653856 | None:intergenic |
ACCAACCAGCCTTCCCGAAA+AGG | 0.456564 | 4_3:-34654021 | Msa0639010:CDS |
TCAAATTAACTCAAAAGAAA+AGG | 0.457768 | 4_3:-34662327 | Msa0639010:five_prime_UTR |
GTTTGTACTTCTTTCTTACC+TGG | 0.458365 | 4_3:+34654153 | None:intergenic |
CAGGTTAACAAGACCAATGT+AGG | 0.458647 | 4_3:-34658511 | Msa0639010:CDS |
TCCTTAAGGCATATAGCATC+TGG | 0.459831 | 4_3:+34654678 | None:intergenic |
AAAGGATAGTAACCTGAAAA+CGG | 0.462345 | 4_3:+34658025 | None:intergenic |
GCTGATCTTGCTTCTGGCGA+TGG | 0.463653 | 4_3:-34654867 | Msa0639010:CDS |
TTAACTCCAGAAGTTACAAT+TGG | 0.464038 | 4_3:+34655492 | None:intergenic |
GAAAACGGGTGCATAAGATA+TGG | 0.464608 | 4_3:+34658040 | None:intergenic |
AAGGGCAGTTCTATGTCATC+TGG | 0.466818 | 4_3:-34658448 | Msa0639010:CDS |
AAGTAACTGAAACTGGTAAA+GGG | 0.469551 | 4_3:-34655590 | Msa0639010:CDS |
TGATGACAACTTCTTACCTA+TGG | 0.472509 | 4_3:-34653670 | Msa0639010:CDS |
TTGGAGAAGGTTACGTAGAA+AGG | 0.479331 | 4_3:+34655951 | None:intergenic |
CCCTGATATTTCATGGGGCA+CGG | 0.479386 | 4_3:-34656538 | Msa0639010:CDS |
GCCTCCAATAACTTCGCCTC+TGG | 0.480180 | 4_3:+34660019 | None:intergenic |
GAGTTGCATAATCCGGGAAA+TGG | 0.480366 | 4_3:-34658100 | Msa0639010:CDS |
ATCTTCCCCTGATATTTCAT+GGG | 0.481945 | 4_3:-34656544 | Msa0639010:CDS |
TACCTGGTGACCTCTTACAT+GGG | 0.482192 | 4_3:+34654169 | None:intergenic |
AAGGATAGTAACCTGAAAAC+GGG | 0.482248 | 4_3:+34658026 | None:intergenic |
CAGCTACACGTTGTCACCTC+TGG | 0.482910 | 4_3:+34656068 | None:intergenic |
TGCGAAACACTGAGCTTGCT+TGG | 0.482928 | 4_3:+34658131 | None:intergenic |
CCATTAGCTAAAATCGTAGC+TGG | 0.483148 | 4_3:+34656017 | None:intergenic |
GGAGCGTTCTTCTCCCGAAA+TGG | 0.484215 | 4_3:-34662180 | Msa0639010:CDS |
GTTCTTCCTGAAGGGAATGC+TGG | 0.486036 | 4_3:+34654894 | None:intergenic |
ATAGCACCAATTGTAACTTC+TGG | 0.488450 | 4_3:-34655498 | Msa0639010:CDS |
CCTGAAGGGAATGCTGGACA+TGG | 0.490271 | 4_3:+34654900 | None:intergenic |
TATTTGTACTGCAGCAGCAT+TGG | 0.491242 | 4_3:+34654464 | None:intergenic |
ATGGATGGACGGCTCTACAC+TGG | 0.493508 | 4_3:-34655449 | Msa0639010:CDS |
AGAATTCCTAATATCTCTGC+AGG | 0.493849 | 4_3:+34660934 | None:intergenic |
TCAAAGAGTTGTCAAAATCC+AGG | 0.494158 | 4_3:-34654391 | Msa0639010:intron |
AATTACCTCCCACTTGTTCA+GGG | 0.495564 | 4_3:-34657863 | Msa0639010:CDS |
CAGCATCAAGAGAATCCTTA+AGG | 0.496736 | 4_3:+34654664 | None:intergenic |
GAGCACTCAACATAGGGTCC+TGG | 0.496971 | 4_3:-34657811 | Msa0639010:CDS |
TCGAGTAATGAAGAGCCAAC+TGG | 0.497413 | 4_3:-34655699 | Msa0639010:CDS |
TTGAGGCACTTTAGAAGGGA+TGG | 0.497421 | 4_3:-34660331 | Msa0639010:CDS |
CGGTGGAGGCGTAAGGGCAG+TGG | 0.498062 | 4_3:-34654089 | Msa0639010:CDS |
GGATGATACAGGGGAAGGTT+CGG | 0.500961 | 4_3:+34657754 | None:intergenic |
TTTCGGGAAGGCTGGTTGGT+TGG | 0.502036 | 4_3:+34654024 | None:intergenic |
AATGCGACATCATTTGCAAC+TGG | 0.503844 | 4_3:-34655835 | Msa0639010:CDS |
TATATTACGGTGGAGGCGTA+AGG | 0.504437 | 4_3:-34654096 | Msa0639010:CDS |
CATCCATTGTGAGTGATTCA+AGG | 0.505159 | 4_3:+34654796 | None:intergenic |
TTATGCTGATTCAGAAATTG+AGG | 0.506793 | 4_3:-34656421 | Msa0639010:intron |
GAAATATCCATCTCTCCAGT+TGG | 0.507509 | 4_3:+34655684 | None:intergenic |
AGAAGTTACAATTGGTGCTA+TGG | 0.508586 | 4_3:+34655500 | None:intergenic |
TGTGATAGATGATACCTCAT+TGG | 0.509091 | 4_3:-34656502 | Msa0639010:CDS |
TTTATCCATGACATTGTCCC+AGG | 0.509557 | 4_3:+34657793 | None:intergenic |
GTCTCTGCAATCAAATTGGC+AGG | 0.510338 | 4_3:-34657678 | Msa0639010:intron |
TCCTGGAGAAGGTTATATTA+CGG | 0.511577 | 4_3:-34654109 | Msa0639010:CDS |
GTTGCTCTCCTTGTCTCCAT+GGG | 0.517325 | 4_3:-34654948 | Msa0639010:CDS |
CTACACTGGGCTGCATCATG+TGG | 0.518678 | 4_3:-34655435 | Msa0639010:CDS |
ATGTTAAAGGCCCATGTAAG+AGG | 0.521276 | 4_3:-34654179 | Msa0639010:intron |
CATAGAAGAAAGAAGCTGAC+TGG | 0.521636 | 4_3:-34662366 | Msa0639010:five_prime_UTR |
CATGGACTTAACCCTTAAAA+GGG | 0.522222 | 4_3:+34653938 | None:intergenic |
TTCCACTTCCCCAAACATAC+AGG | 0.522582 | 4_3:+34656043 | None:intergenic |
TAGAAACCATACTCGGTGGC+CGG | 0.524497 | 4_3:+34660869 | None:intergenic |
CAGAGGTGACAACGTGTAGC+TGG | 0.528053 | 4_3:-34656067 | Msa0639010:CDS |
CTCCACCTCATGAGATTGGA+CGG | 0.528271 | 4_3:-34655977 | Msa0639010:CDS |
AAAGTAACTGAAACTGGTAA+AGG | 0.528379 | 4_3:-34655591 | Msa0639010:CDS |
CAGGAATTTGAGTACAAAGA+GGG | 0.529312 | 4_3:-34655906 | Msa0639010:CDS |
TTAGAAGGGATGGATACAAC+TGG | 0.529528 | 4_3:-34660321 | Msa0639010:CDS |
AAATCAAAAGAAAATAGGTC+AGG | 0.530279 | 4_3:+34656705 | None:intergenic |
TTTCATGAGTTGCATAATCC+GGG | 0.531246 | 4_3:-34658106 | Msa0639010:CDS |
AGGCATAAGTACAGATACTA+AGG | 0.532801 | 4_3:-34658491 | Msa0639010:CDS |
TTGCAACGCCTGTGCACTGG+GGG | 0.533191 | 4_3:-34654707 | Msa0639010:CDS |
TGAAGAGCCAACTGGAGAGA+TGG | 0.533599 | 4_3:-34655691 | Msa0639010:CDS |
ATCAACTTCCGTGATGTGAA+TGG | 0.534863 | 4_3:-34655468 | Msa0639010:CDS |
CTCATGTGTTTGGTAAAGAT+GGG | 0.535877 | 4_3:-34655566 | Msa0639010:CDS |
TCTGTCTTCAACGAAGGAAG+TGG | 0.537368 | 4_3:-34657707 | Msa0639010:CDS |
ACTGGGCTGCATCATGTGGC+AGG | 0.538074 | 4_3:-34655431 | Msa0639010:intron |
ACCATACTCGGTGGCCGGGT+AGG | 0.538324 | 4_3:+34660874 | None:intergenic |
TCCAGAGGCGAAGTTATTGG+AGG | 0.539110 | 4_3:-34660020 | Msa0639010:CDS |
GCTTCTGGCGATGGCCAGAA+AGG | 0.539832 | 4_3:-34654858 | Msa0639010:CDS |
TCGCCAGAAGCAAGATCAGC+AGG | 0.541056 | 4_3:+34654870 | None:intergenic |
GGTCAGAGAGCACTCAACAT+AGG | 0.543054 | 4_3:-34657818 | Msa0639010:CDS |
AGAAACCATACTCGGTGGCC+GGG | 0.543565 | 4_3:+34660870 | None:intergenic |
TGGTTCAGTATCCAGAAGCT+CGG | 0.545136 | 4_3:-34653917 | Msa0639010:CDS |
GTCAGAGAGCACTCAACATA+GGG | 0.545853 | 4_3:-34657817 | Msa0639010:CDS |
GGTTACATCAGATTCCCAAA+AGG | 0.546119 | 4_3:-34658467 | Msa0639010:CDS |
GGTTCAGTATCCAGAAGCTC+GGG | 0.547885 | 4_3:-34653916 | Msa0639010:CDS |
TATTTCAAAACACAGGTTGA+AGG | 0.548307 | 4_3:-34655667 | Msa0639010:CDS |
ACCGTAATATAACCTTCTCC+AGG | 0.551191 | 4_3:+34654108 | None:intergenic |
TCAGTATGAAGAGGATGATG+AGG | 0.553757 | 4_3:-34654565 | Msa0639010:CDS |
AGTCATGTATGCTAAACAGC+TGG | 0.554108 | 4_3:+34656460 | None:intergenic |
GGAAGCTCATGAGAAGTTGA+AGG | 0.554386 | 4_3:-34660269 | Msa0639010:intron |
GAGAAAGATCAACGCGGAAA+GGG | 0.555498 | 4_3:+34662254 | None:intergenic |
GCTGGTCTTGAGATAGAGAC+AGG | 0.556085 | 4_3:+34656478 | None:intergenic |
CGGATTATGCAACTCATGAA+AGG | 0.556996 | 4_3:+34658108 | None:intergenic |
AGTTTGAAGCACAGCATCGA+TGG | 0.557059 | 4_3:-34660963 | Msa0639010:CDS |
GAGTGAACAAAAGTTCCAAA+AGG | 0.557664 | 4_3:-34653961 | Msa0639010:CDS |
GGCCCATGTAAGAGGTCACC+AGG | 0.559386 | 4_3:-34654171 | Msa0639010:CDS |
AACCAAATCTGGACATGGGG+AGG | 0.559797 | 4_3:-34654493 | Msa0639010:CDS |
CTTTACTCAGTCGTTAAGCA+TGG | 0.560266 | 4_3:-34656802 | Msa0639010:CDS |
TCAGCAGGTGTTCTTCCTGA+AGG | 0.561093 | 4_3:+34654885 | None:intergenic |
AACTATTCCGCTGAACTACT+GGG | 0.561115 | 4_3:-34656768 | Msa0639010:CDS |
AGAGAAAGATCAACGCGGAA+AGG | 0.561625 | 4_3:+34662253 | None:intergenic |
GTTACATCAGATTCCCAAAA+GGG | 0.561877 | 4_3:-34658466 | Msa0639010:CDS |
GAGTTCGATAAATTCGGAAG+AGG | 0.562641 | 4_3:-34653739 | Msa0639010:CDS |
TCTCAAAAGAACCGCCTACC+CGG | 0.563454 | 4_3:-34660888 | Msa0639010:CDS |
AGCACTCAACATAGGGTCCT+GGG | 0.567035 | 4_3:-34657810 | Msa0639010:CDS |
GATTAAAGAATTTGCATCAG+TGG | 0.567503 | 4_3:-34656583 | Msa0639010:CDS |
CCGTGCCCCATGAAATATCA+GGG | 0.568861 | 4_3:+34656538 | None:intergenic |
ATGGATGATGTGAATAAAGA+TGG | 0.571903 | 4_3:-34654780 | Msa0639010:CDS |
ATACTCGGTGGCCGGGTAGG+CGG | 0.571941 | 4_3:+34660877 | None:intergenic |
TCAATGTCTGTCTTCAACGA+AGG | 0.572676 | 4_3:-34657713 | Msa0639010:CDS |
CAGCTGCACCCATGGAGACA+AGG | 0.573677 | 4_3:+34654940 | None:intergenic |
CGTAAGGGCAGTGGTTTACG+TGG | 0.575467 | 4_3:-34654080 | Msa0639010:CDS |
TTAAGGAGAAGCTGTACTCA+TGG | 0.575527 | 4_3:-34655623 | Msa0639010:CDS |
AACCCATTTGAAGAAAATGC+GGG | 0.575833 | 4_3:-34656843 | Msa0639010:CDS |
TGGATGGACGGCTCTACACT+GGG | 0.581082 | 4_3:-34655448 | Msa0639010:CDS |
TACTTGATGTATTCTATCAG+CGG | 0.582154 | 4_3:+34654623 | None:intergenic |
ACCCGTCCAATCTCATGAGG+TGG | 0.583328 | 4_3:+34655975 | None:intergenic |
TTATTCAGTCTTCACTATGA+CGG | 0.583566 | 4_3:-34662201 | Msa0639010:exon |
ACCAAATCTGGACATGGGGA+GGG | 0.585938 | 4_3:-34654492 | Msa0639010:CDS |
GTCCGTGGGAATCCTGGAGA+AGG | 0.588343 | 4_3:-34654120 | Msa0639010:CDS |
AGGGTCCTGGGACAATGTCA+TGG | 0.588470 | 4_3:-34657798 | Msa0639010:CDS |
ACAAGCAAATCTATTGGAGA+AGG | 0.590474 | 4_3:+34655938 | None:intergenic |
AAGGATCAATCGAATGCCAT+AGG | 0.590654 | 4_3:+34653654 | None:intergenic |
AAACCAATCATTTGGTCCGT+GGG | 0.591404 | 4_3:-34654134 | Msa0639010:CDS |
GAAAAGAATTGGATGATACA+GGG | 0.592068 | 4_3:+34657744 | None:intergenic |
CAGCAGGTGTTCTTCCTGAA+GGG | 0.592358 | 4_3:+34654886 | None:intergenic |
ATCTGTACTTATGCCTACAT+TGG | 0.592564 | 4_3:+34658498 | None:intergenic |
TCCGGGAAATGGTCCACAGA+CGG | 0.593297 | 4_3:-34658089 | Msa0639010:CDS |
AAGTCAACCAAATCTGGACA+TGG | 0.593935 | 4_3:-34654498 | Msa0639010:CDS |
GCAGCTAGCTCAGTATGAAG+AGG | 0.595976 | 4_3:-34654574 | Msa0639010:CDS |
ATCTTTCAAACATAGGTGGA+AGG | 0.598899 | 4_3:-34660093 | Msa0639010:intron |
GAAAGAAGTAGCCACCGCAA+AGG | 0.598994 | 4_3:+34653635 | None:intergenic |
CAGGCGTCTGCTAAATGTAG+TGG | 0.601069 | 4_3:-34653886 | Msa0639010:CDS |
TTACCTCCCACTTGTTCAGG+GGG | 0.602984 | 4_3:-34657861 | Msa0639010:CDS |
TTACCTTAACATCCAAGTAG+TGG | 0.606730 | 4_3:+34659672 | None:intergenic |
CAAACCAATCATTTGGTCCG+TGG | 0.607032 | 4_3:-34654135 | Msa0639010:CDS |
ATTACCTCCCACTTGTTCAG+GGG | 0.608046 | 4_3:-34657862 | Msa0639010:CDS |
TCCACCTCATGAGATTGGAC+GGG | 0.608713 | 4_3:-34655976 | Msa0639010:CDS |
AGAAGGTTATATTACGGTGG+AGG | 0.609021 | 4_3:-34654103 | Msa0639010:CDS |
ATACACTGCTACTACGCCCA+TGG | 0.609101 | 4_3:-34660060 | Msa0639010:CDS |
AACCAGCCTTCCCGAAAAGG+AGG | 0.610047 | 4_3:-34654018 | Msa0639010:CDS |
ATATTACGGTGGAGGCGTAA+GGG | 0.610245 | 4_3:-34654095 | Msa0639010:CDS |
AAAGATCAACGCGGAAAGGG+AGG | 0.610389 | 4_3:+34662257 | None:intergenic |
AATTCGGAAGAGGCAGCTGA+TGG | 0.613503 | 4_3:-34653729 | Msa0639010:CDS |
TCAGGAATTTGAGTACAAAG+AGG | 0.616104 | 4_3:-34655907 | Msa0639010:CDS |
TTATATGCTCAGAGAGAGAA+CGG | 0.620970 | 4_3:-34654970 | Msa0639010:intron |
AGATGGATATTTCAAAACAC+AGG | 0.621087 | 4_3:-34655674 | Msa0639010:CDS |
ACTTCCGTGATGTGAATGGA+TGG | 0.622379 | 4_3:-34655464 | Msa0639010:CDS |
CCGTCCATCCATTCACATCA+CGG | 0.622728 | 4_3:+34655460 | None:intergenic |
GTCAACCAAATCTGGACATG+GGG | 0.625003 | 4_3:-34654496 | Msa0639010:CDS |
GGAAGAGGCAGCTGATGGTG+TGG | 0.625414 | 4_3:-34653724 | Msa0639010:CDS |
TCATGGGGCACGGATGAATG+TGG | 0.628341 | 4_3:-34656528 | Msa0639010:CDS |
ACCCAAACCCAGTAGTTCAG+CGG | 0.628373 | 4_3:+34656761 | None:intergenic |
AGTCAACCAAATCTGGACAT+GGG | 0.628863 | 4_3:-34654497 | Msa0639010:CDS |
GAACCCATTTGAAGAAAATG+CGG | 0.632228 | 4_3:-34656844 | Msa0639010:CDS |
AACTGGCGAAAGAAGAACGA+TGG | 0.634955 | 4_3:-34660304 | Msa0639010:CDS |
CCACCTTGAATCACTCACAA+TGG | 0.636284 | 4_3:-34654799 | Msa0639010:CDS |
CCGTGATGTGAATGGATGGA+CGG | 0.639667 | 4_3:-34655460 | Msa0639010:CDS |
AACCTTCTCCAGGATTCCCA+CGG | 0.641059 | 4_3:+34654118 | None:intergenic |
GAATTGGATGATACAGGGGA+AGG | 0.641814 | 4_3:+34657749 | None:intergenic |
GCATCAATCTTATCCGTCTG+TGG | 0.641952 | 4_3:+34658076 | None:intergenic |
GCGACATCATTTGCAACTGG+AGG | 0.643033 | 4_3:-34655832 | Msa0639010:CDS |
TCTTCCCCTGATATTTCATG+GGG | 0.643122 | 4_3:-34656543 | Msa0639010:CDS |
AGAGGCAGCTGATGGTGTGG+AGG | 0.643223 | 4_3:-34653721 | Msa0639010:CDS |
AAAAGAATTGGATGATACAG+GGG | 0.645982 | 4_3:+34657745 | None:intergenic |
TTTGAACTGTCAAAACTGAA+CGG | 0.647961 | 4_3:+34653519 | None:intergenic |
ATTCGATTGATCCTTTGCGG+TGG | 0.654921 | 4_3:-34653646 | Msa0639010:exon |
CCATTTGAAGAAAATGCGGG+CGG | 0.658580 | 4_3:-34656840 | Msa0639010:CDS |
GGGTAGTGTATTAACAGGAG+AGG | 0.664805 | 4_3:+34653613 | None:intergenic |
TCTCCTGTTAATACACTACC+CGG | 0.665038 | 4_3:-34653611 | Msa0639010:three_prime_UTR |
GGAACCCGTCCAATCTCATG+AGG | 0.671886 | 4_3:+34655972 | None:intergenic |
AGAAGCTGTCAACCTTCGTG+AGG | 0.672119 | 4_3:+34656613 | None:intergenic |
GTGGCTAGTTAATAATGACT+CGG | 0.672440 | 4_3:+34654818 | None:intergenic |
CATAAGTACAGATACTAAGG+AGG | 0.672927 | 4_3:-34658488 | Msa0639010:CDS |
AAGATAATGAAAATTTCCAG+AGG | 0.673367 | 4_3:-34660035 | Msa0639010:CDS |
CCATCTTTACCAAACACATG+AGG | 0.676075 | 4_3:+34655567 | None:intergenic |
GGTAAATCCAATTCAAACGA+GGG | 0.680378 | 4_3:-34657839 | Msa0639010:CDS |
AGATAGAGACAGGTCCAATG+AGG | 0.681492 | 4_3:+34656488 | None:intergenic |
ATTGCAACGCCTGTGCACTG+GGG | 0.681592 | 4_3:-34654708 | Msa0639010:CDS |
TGGAGAAGGTTATATTACGG+TGG | 0.685543 | 4_3:-34654106 | Msa0639010:CDS |
GAATTCCTAATATCTCTGCA+GGG | 0.686153 | 4_3:+34660935 | None:intergenic |
AAGGAAAGAACGAACGACGG+TGG | 0.687189 | 4_3:-34662308 | Msa0639010:five_prime_UTR |
AGCTTCTGGATACTGAACCA+TGG | 0.689349 | 4_3:+34653920 | None:intergenic |
TGCTAAAGAGAGCCTCACGA+AGG | 0.690094 | 4_3:-34656625 | Msa0639010:CDS |
TAGCTGGTCCTGTATGTTTG+GGG | 0.692929 | 4_3:-34656051 | Msa0639010:CDS |
GGGTAAATCCAATTCAAACG+AGG | 0.693024 | 4_3:-34657840 | Msa0639010:CDS |
ATTTGTGAATAGTAGACCAG+AGG | 0.696270 | 4_3:-34656084 | Msa0639010:CDS |
TACCTCCCACTTGTTCAGGG+GGG | 0.703226 | 4_3:-34657860 | Msa0639010:CDS |
GGACGATTACCGTCAAACCA+AGG | 0.706351 | 4_3:-34653865 | Msa0639010:intron |
CGTGCCCCATGAAATATCAG+GGG | 0.706527 | 4_3:+34656539 | None:intergenic |
GTGTTTGGTAAAGATGGGCA+AGG | 0.707666 | 4_3:-34655561 | Msa0639010:CDS |
GAAAAGGAAAGAACGAACGA+CGG | 0.714322 | 4_3:-34662311 | Msa0639010:five_prime_UTR |
TGTGCGTCAAAACTTGCACA+CGG | 0.720382 | 4_3:-34656664 | Msa0639010:CDS |
TGCAACGCCTGTGCACTGGG+GGG | 0.729574 | 4_3:-34654706 | Msa0639010:CDS |
CCATTGTGAGTGATTCAAGG+TGG | 0.735758 | 4_3:+34654799 | None:intergenic |
GAATGAGAGAAAGATCAACG+CGG | 0.815044 | 4_3:+34662248 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATAATAAATAGTTTTTGTAA+TGG | + | chr4_3:34656057-34656076 | None:intergenic | 10.0% |
!! | ATATTTAAGTAAAACTTTAT+TGG | + | chr4_3:34656133-34656152 | None:intergenic | 10.0% |
!! | ATTAGTATTAAATAAATAAG+AGG | + | chr4_3:34656860-34656879 | None:intergenic | 10.0% |
!! | AAAATAAGTTAACAATAAAA+TGG | + | chr4_3:34658843-34658862 | None:intergenic | 10.0% |
!! | AACAATAAAGAAAATATATT+GGG | + | chr4_3:34660510-34660529 | None:intergenic | 10.0% |
!!! | AAATAGTTCAAAATTATTTT+TGG | - | chr4_3:34660758-34660777 | Msa0639010:intron | 10.0% |
!!! | TTTTTTTTTTTTTTTTTGCT+TGG | - | chr4_3:34662326-34662345 | Msa0639010:five_prime_UTR | 10.0% |
!! | ATATAATCCATTAAATTAAC+AGG | + | chr4_3:34653859-34653878 | None:intergenic | 15.0% |
!! | TTTATTTGATTATTATCGTA+CGG | - | chr4_3:34654057-34654076 | Msa0639010:CDS | 15.0% |
!! | TAATAAACTAAACATAACAT+AGG | + | chr4_3:34655066-34655085 | None:intergenic | 15.0% |
!! | AATATATAAATAAATGTGTG+AGG | - | chr4_3:34656877-34656896 | Msa0639010:intron | 15.0% |
!! | ATATATAAATAAATGTGTGA+GGG | - | chr4_3:34656878-34656897 | Msa0639010:intron | 15.0% |
!!! | ACTTTTTAATAGATGTTTTA+TGG | - | chr4_3:34657362-34657381 | Msa0639010:intron | 15.0% |
!!! | CTTTTTAATAGATGTTTTAT+GGG | - | chr4_3:34657363-34657382 | Msa0639010:intron | 15.0% |
!! | ATTTGAGAAAGAAAAAAAAA+AGG | + | chr4_3:34657905-34657924 | None:intergenic | 15.0% |
!! | TGAAAATTATTAGTACAAAT+GGG | + | chr4_3:34658466-34658485 | None:intergenic | 15.0% |
!! | TTGAAAATTATTAGTACAAA+TGG | + | chr4_3:34658467-34658486 | None:intergenic | 15.0% |
!!! | GTTTTTTTTTTTTGAAAACT+CGG | - | chr4_3:34658526-34658545 | Msa0639010:intron | 15.0% |
!! | TCAAATATAAAATTGAAACA+AGG | + | chr4_3:34658970-34658989 | None:intergenic | 15.0% |
!! | AAGTATTCTTTAGATATTTA+CGG | + | chr4_3:34659520-34659539 | None:intergenic | 15.0% |
!! | CAACAATAAAGAAAATATAT+TGG | + | chr4_3:34660511-34660530 | None:intergenic | 15.0% |
!! | AATTCAAAATTTCCAAAATA+TGG | + | chr4_3:34660598-34660617 | None:intergenic | 15.0% |
!!! | TATTTTTGGAAAAATTACAT+TGG | - | chr4_3:34660772-34660791 | Msa0639010:intron | 15.0% |
!! | CATGATACATATATATTAAA+TGG | + | chr4_3:34660893-34660912 | None:intergenic | 15.0% |
!! | AAAAGAAAAGTTATATCAAT+GGG | + | chr4_3:34661640-34661659 | None:intergenic | 15.0% |
!! | AAAAAGAAAAGTTATATCAA+TGG | + | chr4_3:34661641-34661660 | None:intergenic | 15.0% |
!! | AAAAAATATTCGTTAAGTAT+AGG | + | chr4_3:34662098-34662117 | None:intergenic | 15.0% |
!!! | TTAATGATTGATATTTTCTT+TGG | - | chr4_3:34662120-34662139 | Msa0639010:intron | 15.0% |
!! | AAAAAAAAAAAAAAAACTGC+CGG | + | chr4_3:34662320-34662339 | None:intergenic | 15.0% |
!! | TCAAATTAACTCAAAAGAAA+AGG | - | chr4_3:34653582-34653601 | Msa0639010:three_prime_UTR | 20.0% |
!!! | TCGTTTGTTTTTATAGAATT+AGG | - | chr4_3:34653914-34653933 | Msa0639010:CDS | 20.0% |
!!! | CGTTTGTTTTTATAGAATTA+GGG | - | chr4_3:34653915-34653934 | Msa0639010:CDS | 20.0% |
!!! | GTTTTTGTAAAAATCTGTTT+TGG | - | chr4_3:34654085-34654104 | Msa0639010:CDS | 20.0% |
!!! | TCAGTTTTGGTTTATTTAAT+AGG | - | chr4_3:34654243-34654262 | Msa0639010:intron | 20.0% |
!!! | CAGTTTTGGTTTATTTAATA+GGG | - | chr4_3:34654244-34654263 | Msa0639010:intron | 20.0% |
!! | ACAAGAATAATTGATTAACT+CGG | + | chr4_3:34654492-34654511 | None:intergenic | 20.0% |
!!! | TATTCTTGTACTGATTATAT+CGG | - | chr4_3:34654503-34654522 | Msa0639010:CDS | 20.0% |
!!! | TTTTTTGTGAAAATCAGTTT+TGG | - | chr4_3:34654537-34654556 | Msa0639010:CDS | 20.0% |
!!! | AATTTATTTTTGCTGCTAAT+TGG | + | chr4_3:34654802-34654821 | None:intergenic | 20.0% |
!!! | GTTATGTTTAGTTTATTAGT+AGG | - | chr4_3:34655068-34655087 | Msa0639010:intron | 20.0% |
!! | AAAATAGATCATTATACTCA+CGG | + | chr4_3:34655921-34655940 | None:intergenic | 20.0% |
!!! | TTTTTTTTTTTCTCATGTGT+TGG | - | chr4_3:34656312-34656331 | Msa0639010:intron | 20.0% |
!! | AATACATTAACATGCTATTA+AGG | + | chr4_3:34656369-34656388 | None:intergenic | 20.0% |
!! | TATATAAATAAATGTGTGAG+GGG | - | chr4_3:34656879-34656898 | Msa0639010:intron | 20.0% |
!!! | TAATTACCAGAAAGTTTTAT+TGG | + | chr4_3:34656911-34656930 | None:intergenic | 20.0% |
!! | GGATTATACATTATAAAACA+CGG | - | chr4_3:34657602-34657621 | Msa0639010:intron | 20.0% |
!! | GCATATTAAATCAGATTATA+AGG | + | chr4_3:34657629-34657648 | None:intergenic | 20.0% |
!! | CATGTAATTACTTAATAGTT+TGG | - | chr4_3:34657701-34657720 | Msa0639010:CDS | 20.0% |
!!! | TTTGCATTTTAATTTTGTTG+TGG | - | chr4_3:34658005-34658024 | Msa0639010:intron | 20.0% |
!! | AATGAATAACTTCATTGAAA+GGG | + | chr4_3:34658441-34658460 | None:intergenic | 20.0% |
!! | CAACAATTCAAATAACAAAA+TGG | + | chr4_3:34659040-34659059 | None:intergenic | 20.0% |
!!! | CACACAATTATATAACTTTT+AGG | + | chr4_3:34659650-34659669 | None:intergenic | 20.0% |
!! | AATATATATGTATCATGAAG+TGG | - | chr4_3:34660896-34660915 | Msa0639010:CDS | 20.0% |
!! | AAAAAAAAAAAAAAACTGCC+GGG | + | chr4_3:34662319-34662338 | None:intergenic | 20.0% |
!! | TTTATTCTGTTCTGTGATTT+TGG | - | chr4_3:34653830-34653849 | Msa0639010:intron | 25.0% |
! | TTGGAATCCTGTTAATTTAA+TGG | - | chr4_3:34653849-34653868 | Msa0639010:intron | 25.0% |
! | TTACTCTGTTGAATGAATTA+CGG | - | chr4_3:34653945-34653964 | Msa0639010:CDS | 25.0% |
!! | GAATGTTATTGATTGTGTTT+AGG | - | chr4_3:34653975-34653994 | Msa0639010:CDS | 25.0% |
! | AAAAACTGAATTGAATCGAA+TGG | + | chr4_3:34654133-34654152 | None:intergenic | 25.0% |
!!! | TCAGTTTTGGTTTGTTTTAT+AGG | - | chr4_3:34654160-34654179 | Msa0639010:CDS | 25.0% |
!!! | CAGTTTTGGTTTGTTTTATA+GGG | - | chr4_3:34654161-34654180 | Msa0639010:CDS | 25.0% |
!!! | TCTTTGTTGTTGATCTAATT+AGG | - | chr4_3:34654199-34654218 | Msa0639010:intron | 25.0% |
! | TGATCTAATTAGGTTAAATC+AGG | - | chr4_3:34654209-34654228 | Msa0639010:intron | 25.0% |
! | GATCTAATTAGGTTAAATCA+GGG | - | chr4_3:34654210-34654229 | Msa0639010:intron | 25.0% |
! | TTAAAAGATGTTAATGTGAG+AGG | - | chr4_3:34654327-34654346 | Msa0639010:intron | 25.0% |
!!! | TACGTTTTTTATTGCTAACT+TGG | - | chr4_3:34654378-34654397 | Msa0639010:intron | 25.0% |
!! | TGTTTTGTGATTATCGAAAT+TGG | - | chr4_3:34654464-34654483 | Msa0639010:CDS | 25.0% |
! | TATATGGAAAAGACTCAAAA+AGG | + | chr4_3:34655095-34655114 | None:intergenic | 25.0% |
! | TATGAATTGTTTGTAGCAAT+TGG | - | chr4_3:34655156-34655175 | Msa0639010:intron | 25.0% |
! | ATGAATTGTTTGTAGCAATT+GGG | - | chr4_3:34655157-34655176 | Msa0639010:intron | 25.0% |
! | AGCTGAATTCTTATAATTGT+TGG | - | chr4_3:34655257-34655276 | Msa0639010:intron | 25.0% |
!! | TTTTCAATCGGAAAATTTTG+AGG | - | chr4_3:34655561-34655580 | Msa0639010:CDS | 25.0% |
! | GGTAACAATGTAATTTACTT+CGG | - | chr4_3:34655661-34655680 | Msa0639010:CDS | 25.0% |
! | TTGTGATATCTTTCAAACAT+AGG | - | chr4_3:34655809-34655828 | Msa0639010:CDS | 25.0% |
!! | ATTTTCATTATCTTCTCCAT+GGG | + | chr4_3:34655868-34655887 | None:intergenic | 25.0% |
!! | AATTTTCATTATCTTCTCCA+TGG | + | chr4_3:34655869-34655888 | None:intergenic | 25.0% |
! | AAGATAATGAAAATTTCCAG+AGG | - | chr4_3:34655874-34655893 | Msa0639010:CDS | 25.0% |
! | TCTTGAAATTAATCAGCATA+TGG | - | chr4_3:34656164-34656183 | Msa0639010:intron | 25.0% |
!! | TGAATTATCTTTTTACTGCA+GGG | - | chr4_3:34656192-34656211 | Msa0639010:intron | 25.0% |
! | TATTTCACACTTGTAATTTC+TGG | - | chr4_3:34656276-34656295 | Msa0639010:intron | 25.0% |
! | TTGTTTGATGAAATTAGTGT+TGG | - | chr4_3:34656414-34656433 | Msa0639010:intron | 25.0% |
! | CTTCAGGAAAAAAAAATACT+TGG | + | chr4_3:34656507-34656526 | None:intergenic | 25.0% |
! | ACAAATTAACAAAACCAAGT+TGG | + | chr4_3:34656551-34656570 | None:intergenic | 25.0% |
!! | AAAGAAACTCAATACTGATT+TGG | + | chr4_3:34656715-34656734 | None:intergenic | 25.0% |
! | TACTATCCAATAAAACTTTC+TGG | - | chr4_3:34656902-34656921 | Msa0639010:intron | 25.0% |
! | TGTCTAATGCCTTAATATTT+AGG | - | chr4_3:34657025-34657044 | Msa0639010:intron | 25.0% |
! | GTCTAATGCCTTAATATTTA+GGG | - | chr4_3:34657026-34657045 | Msa0639010:intron | 25.0% |
!!! | GAATCAATTAGTTTTAGTGA+GGG | + | chr4_3:34657083-34657102 | None:intergenic | 25.0% |
! | TAACTCAGTATCATCAATTT+GGG | + | chr4_3:34657234-34657253 | None:intergenic | 25.0% |
! | TTAACTCAGTATCATCAATT+TGG | + | chr4_3:34657235-34657254 | None:intergenic | 25.0% |
! | CAAGAAAATTACCATAGAAA+TGG | + | chr4_3:34657290-34657309 | None:intergenic | 25.0% |
!! | ATGGTAATTTTCTTGAAAAC+AGG | - | chr4_3:34657295-34657314 | Msa0639010:intron | 25.0% |
! | AACTCTCATATATTGTCTAA+TGG | - | chr4_3:34657581-34657600 | Msa0639010:intron | 25.0% |
! | TAATCTGATTTAATATGCCA+AGG | - | chr4_3:34657631-34657650 | Msa0639010:intron | 25.0% |
! | TTGCAACATATCATTTCATA+TGG | - | chr4_3:34657676-34657695 | Msa0639010:intron | 25.0% |
!! | ACTTAATAGTTTGGTTCATT+TGG | - | chr4_3:34657710-34657729 | Msa0639010:CDS | 25.0% |
!! | CTTAATAGTTTGGTTCATTT+GGG | - | chr4_3:34657711-34657730 | Msa0639010:CDS | 25.0% |
! | TAATTTGATCCTGAATCAAT+AGG | + | chr4_3:34658031-34658050 | None:intergenic | 25.0% |
!!! | GAGATCTGATATTTTAAGTT+CGG | - | chr4_3:34658363-34658382 | Msa0639010:CDS | 25.0% |
! | CAATGAATAACTTCATTGAA+AGG | + | chr4_3:34658442-34658461 | None:intergenic | 25.0% |
! | CTTTCAATGAAGTTATTCAT+TGG | - | chr4_3:34658440-34658459 | Msa0639010:CDS | 25.0% |
! | AATACTGATATAACCAACTT+GGG | + | chr4_3:34658736-34658755 | None:intergenic | 25.0% |
! | TAATACTGATATAACCAACT+TGG | + | chr4_3:34658737-34658756 | None:intergenic | 25.0% |
! | AAATCAAAAGAAAATAGGTC+AGG | + | chr4_3:34659207-34659226 | None:intergenic | 25.0% |
! | GCTCAAAATCAAAAGAAAAT+AGG | + | chr4_3:34659212-34659231 | None:intergenic | 25.0% |
!! | GCTGAGAATAAGTAATTTTT+AGG | + | chr4_3:34659586-34659605 | None:intergenic | 25.0% |
! | CTTTACTAGAAATGTAGATT+TGG | - | chr4_3:34660026-34660045 | Msa0639010:CDS | 25.0% |
!!! | TCAAGTTTTTGAGATTGATA+TGG | - | chr4_3:34660134-34660153 | Msa0639010:intron | 25.0% |
! | AATTTCCAAAATATGGAGAT+GGG | + | chr4_3:34660591-34660610 | None:intergenic | 25.0% |
! | AAATTTCCAAAATATGGAGA+TGG | + | chr4_3:34660592-34660611 | None:intergenic | 25.0% |
! | AGGACACAATTAATGATAAA+AGG | + | chr4_3:34661670-34661689 | None:intergenic | 25.0% |
! | AAGGATGTATCAAATGTATA+AGG | + | chr4_3:34661690-34661709 | None:intergenic | 25.0% |
!!! | AGACATTTTAGAAAATACCT+TGG | + | chr4_3:34662064-34662083 | None:intergenic | 25.0% |
! | TAATCTGAGTTCGATAAATT+CGG | - | chr4_3:34662164-34662183 | Msa0639010:intron | 25.0% |
TTATTCAGTCTTCACTATGA+CGG | - | chr4_3:34653708-34653727 | Msa0639010:CDS | 30.0% | |
! | TTGATTGTGTTTAGGTTACT+AGG | - | chr4_3:34653983-34654002 | Msa0639010:CDS | 30.0% |
!! | CTAGGAGATTTTAATGTGAA+TGG | - | chr4_3:34654001-34654020 | Msa0639010:CDS | 30.0% |
!! | GATTTTAATGTGAATGGCTT+TGG | - | chr4_3:34654007-34654026 | Msa0639010:CDS | 30.0% |
! | TCGATTCAATTCAGTTTTTG+TGG | - | chr4_3:34654134-34654153 | Msa0639010:CDS | 30.0% |
! | GTTTTTGTGGAAATCAGTTT+TGG | - | chr4_3:34654147-34654166 | Msa0639010:CDS | 30.0% |
!!! | TTGGTTTGTTTTATAGGGTT+AGG | - | chr4_3:34654166-34654185 | Msa0639010:CDS | 30.0% |
!!! | TGGTTTGTTTTATAGGGTTA+GGG | - | chr4_3:34654167-34654186 | Msa0639010:CDS | 30.0% |
! | GAATGCTATTGATTGTGTTT+AGG | - | chr4_3:34654304-34654323 | Msa0639010:intron | 30.0% |
! | GGACTATAATTTGACTTCAA+TGG | - | chr4_3:34654353-34654372 | Msa0639010:intron | 30.0% |
!!! | TCAGTTTTGGTTTGTTATAG+AGG | - | chr4_3:34654550-34654569 | Msa0639010:CDS | 30.0% |
!! | TTGGTTTGTTATAGAGGATT+AGG | - | chr4_3:34654556-34654575 | Msa0639010:CDS | 30.0% |
!! | TGGTTTGTTATAGAGGATTA+GGG | - | chr4_3:34654557-34654576 | Msa0639010:CDS | 30.0% |
GAATTACTGTTGAATCGATT+AGG | - | chr4_3:34654591-34654610 | Msa0639010:CDS | 30.0% | |
TTGAATCGATTAGGTTTAGT+TGG | - | chr4_3:34654600-34654619 | Msa0639010:CDS | 30.0% | |
! | ACTTTGAAGGCTATTAAACT+AGG | - | chr4_3:34654628-34654647 | Msa0639010:CDS | 30.0% |
CTCAATATATGCTAATTGTC+TGG | - | chr4_3:34654708-34654727 | Msa0639010:CDS | 30.0% | |
AAGCAATTCTGACAGATATA+TGG | + | chr4_3:34655111-34655130 | None:intergenic | 30.0% | |
TTGCTACAAACAATTCATAG+AGG | + | chr4_3:34655155-34655174 | None:intergenic | 30.0% | |
! | AAATCTTCTCTGTAGTTTGT+AGG | - | chr4_3:34655395-34655414 | Msa0639010:intron | 30.0% |
! | AATCTTCTCTGTAGTTTGTA+GGG | - | chr4_3:34655396-34655415 | Msa0639010:intron | 30.0% |
CATGAACAAAAGATTACTAG+CGG | + | chr4_3:34655424-34655443 | None:intergenic | 30.0% | |
! | GACATGTATTTGATGATTTC+AGG | - | chr4_3:34655524-34655543 | Msa0639010:CDS | 30.0% |
! | ATGTATTTGATGATTTCAGG+TGG | - | chr4_3:34655527-34655546 | Msa0639010:CDS | 30.0% |
!!! | GATCGCTTTTTCTTTTCAAT+CGG | - | chr4_3:34655549-34655568 | Msa0639010:CDS | 30.0% |
!!! | AAATTTTGAGGCACTTTAGA+AGG | - | chr4_3:34655573-34655592 | Msa0639010:CDS | 30.0% |
!!! | AATTTTGAGGCACTTTAGAA+GGG | - | chr4_3:34655574-34655593 | Msa0639010:CDS | 30.0% |
TTCAGCTAATCTTCTCTAAT+TGG | - | chr4_3:34655746-34655765 | Msa0639010:CDS | 30.0% | |
TGATATCTTTCAAACATAGG+TGG | - | chr4_3:34655812-34655831 | Msa0639010:CDS | 30.0% | |
!! | TAATTCAGTACTTTGAAGCT+CGG | + | chr4_3:34656018-34656037 | None:intergenic | 30.0% |
! | CTGAATTATCTTTTTACTGC+AGG | - | chr4_3:34656191-34656210 | Msa0639010:intron | 30.0% |
TATAGTATTTGTCCACTACT+TGG | - | chr4_3:34656225-34656244 | Msa0639010:intron | 30.0% | |
! | GAAGAAACTCAATACTGATT+TGG | + | chr4_3:34656618-34656637 | None:intergenic | 30.0% |
TAATTTAACCTGTGAATGTG+CGG | - | chr4_3:34656676-34656695 | Msa0639010:CDS | 30.0% | |
!! | AAAAATTAGCATGGTGGATA+GGG | + | chr4_3:34656965-34656984 | None:intergenic | 30.0% |
! | TAATTTTTGTGGCTACCAAT+TGG | - | chr4_3:34656977-34656996 | Msa0639010:intron | 30.0% |
TAGACACACAAGATAACTAT+GGG | + | chr4_3:34657011-34657030 | None:intergenic | 30.0% | |
TTAGACACACAAGATAACTA+TGG | + | chr4_3:34657012-34657031 | None:intergenic | 30.0% | |
TGTCTTCACCCTAAATATTA+AGG | + | chr4_3:34657037-34657056 | None:intergenic | 30.0% | |
!!! | CGAATCAATTAGTTTTAGTG+AGG | + | chr4_3:34657084-34657103 | None:intergenic | 30.0% |
!! | CACTAAAACTAATTGATTCG+TGG | - | chr4_3:34657084-34657103 | Msa0639010:intron | 30.0% |
! | TGTGTTATTATCTTCCTACA+AGG | - | chr4_3:34657178-34657197 | Msa0639010:intron | 30.0% |
! | GTGTTATTATCTTCCTACAA+GGG | - | chr4_3:34657179-34657198 | Msa0639010:intron | 30.0% |
TCTTAAAAAGGAGGATTATG+TGG | + | chr4_3:34657258-34657277 | None:intergenic | 30.0% | |
! | AAAACTTGTGAGGCTAATTT+TGG | - | chr4_3:34657321-34657340 | Msa0639010:intron | 30.0% |
TAACATGCGTTCAAGAAATA+TGG | - | chr4_3:34657502-34657521 | Msa0639010:intron | 30.0% | |
! | AAGAAGTTAAAGTGCTTGTT+GGG | + | chr4_3:34657538-34657557 | None:intergenic | 30.0% |
! | AAAGAAGTTAAAGTGCTTGT+TGG | + | chr4_3:34657539-34657558 | None:intergenic | 30.0% |
AATTGAGATATTCAAAGCCT+TGG | + | chr4_3:34657651-34657670 | None:intergenic | 30.0% | |
TTAAATGAATTTCTTCCCAG+AGG | - | chr4_3:34657748-34657767 | Msa0639010:CDS | 30.0% | |
AAAGGATAGTAACCTGAAAA+CGG | + | chr4_3:34657887-34657906 | None:intergenic | 30.0% | |
AATGTCATGGATAAATCTTC+AGG | - | chr4_3:34658124-34658143 | Msa0639010:CDS | 30.0% | |
AAAAGAATTGGATGATACAG+GGG | + | chr4_3:34658167-34658186 | None:intergenic | 30.0% | |
GAAAAGAATTGGATGATACA+GGG | + | chr4_3:34658168-34658187 | None:intergenic | 30.0% | |
TGAACTTGATGGAAAAGAAT+TGG | + | chr4_3:34658179-34658198 | None:intergenic | 30.0% | |
TAGTGATATCTTTCGATTGA+GGG | - | chr4_3:34658264-34658283 | Msa0639010:intron | 30.0% | |
GATTGCACTTGAGATTTATT+GGG | - | chr4_3:34658385-34658404 | Msa0639010:CDS | 30.0% | |
!!! | TTTTTTGAAAACTCGGAATC+CGG | - | chr4_3:34658533-34658552 | Msa0639010:intron | 30.0% |
ATTATACATGTGTAGAGTAC+TGG | - | chr4_3:34658753-34658772 | Msa0639010:intron | 30.0% | |
AAATGCTATCAGACATAGTA+AGG | - | chr4_3:34658808-34658827 | Msa0639010:intron | 30.0% | |
CAGGTTAGAAAAGATACATT+AGG | + | chr4_3:34658882-34658901 | None:intergenic | 30.0% | |
TGAATTTCAAAAACTGACGT+AGG | + | chr4_3:34658997-34659016 | None:intergenic | 30.0% | |
GATTAAAGAATTTGCATCAG+TGG | - | chr4_3:34659326-34659345 | Msa0639010:intron | 30.0% | |
! | TACATGACTTTTCACCTAAA+TGG | - | chr4_3:34659463-34659482 | Msa0639010:intron | 30.0% |
! | ACATGACTTTTCACCTAAAT+GGG | - | chr4_3:34659464-34659483 | Msa0639010:intron | 30.0% |
!! | TTATGCTGATTCAGAAATTG+AGG | - | chr4_3:34659488-34659507 | Msa0639010:intron | 30.0% |
!!! | TCTGTGGTTTGTTCTTTTAT+TGG | + | chr4_3:34659613-34659632 | None:intergenic | 30.0% |
!!! | ACTCTTTTTCAAAACCATAC+AGG | - | chr4_3:34659786-34659805 | Msa0639010:intron | 30.0% |
TTCACTACAAGCAAATCTAT+TGG | + | chr4_3:34659980-34659999 | None:intergenic | 30.0% | |
AGATGGATATTTCAAAACAC+AGG | - | chr4_3:34660235-34660254 | Msa0639010:intron | 30.0% | |
! | TATTTCAAAACACAGGTTGA+AGG | - | chr4_3:34660242-34660261 | Msa0639010:intron | 30.0% |
AAAGTAACTGAAACTGGTAA+AGG | - | chr4_3:34660318-34660337 | Msa0639010:CDS | 30.0% | |
AAGTAACTGAAACTGGTAAA+GGG | - | chr4_3:34660319-34660338 | Msa0639010:CDS | 30.0% | |
TTAACTCCAGAAGTTACAAT+TGG | + | chr4_3:34660420-34660439 | None:intergenic | 30.0% | |
TGATTGCTTATGAAACCATT+AGG | - | chr4_3:34660618-34660637 | Msa0639010:intron | 30.0% | |
GATTGCTTATGAAACCATTA+GGG | - | chr4_3:34660619-34660638 | Msa0639010:intron | 30.0% | |
ATTGCTTATGAAACCATTAG+GGG | - | chr4_3:34660620-34660639 | Msa0639010:intron | 30.0% | |
GATATGAAAATTCCATCCAT+TGG | - | chr4_3:34660642-34660661 | Msa0639010:intron | 30.0% | |
ATGGATGATGTGAATAAAGA+TGG | - | chr4_3:34661129-34661148 | Msa0639010:intron | 30.0% | |
ATGGCACAAAAGAAACTTTA+GGG | - | chr4_3:34661148-34661167 | Msa0639010:intron | 30.0% | |
TACTTGATGTATTCTATCAG+CGG | + | chr4_3:34661289-34661308 | None:intergenic | 30.0% | |
CTTGAAATCCATGATGTTAA+AGG | - | chr4_3:34661717-34661736 | Msa0639010:intron | 30.0% | |
! | AGAAGTACAAACCAATCATT+TGG | - | chr4_3:34661767-34661786 | Msa0639010:intron | 30.0% |
! | ACTATGATTTTCTCAAGGAA+GGG | - | chr4_3:34661917-34661936 | Msa0639010:intron | 30.0% |
! | TAGAAAATACCTTGGTTTGA+CGG | + | chr4_3:34662056-34662075 | None:intergenic | 30.0% |
TATTCGTTAAGTATAGGCAT+AGG | + | chr4_3:34662092-34662111 | None:intergenic | 30.0% | |
AAATCCACAGAACCAAAGAA+AGG | + | chr4_3:34654435-34654454 | None:intergenic | 35.0% | |
CTAGGATATGTTAATGCGAA+TGG | - | chr4_3:34654646-34654665 | Msa0639010:CDS | 35.0% | |
ATATGTTAATGCGAATGGCT+TGG | - | chr4_3:34654651-34654670 | Msa0639010:CDS | 35.0% | |
TTTGCAATATGTGCTTGTAG+TGG | - | chr4_3:34654746-34654765 | Msa0639010:CDS | 35.0% | |
GAATTCCTAATATCTCTGCA+GGG | + | chr4_3:34654977-34654996 | None:intergenic | 35.0% | |
AGAATTCCTAATATCTCTGC+AGG | + | chr4_3:34654978-34654997 | None:intergenic | 35.0% | |
ACATAGGTAGAAACCATACT+CGG | + | chr4_3:34655050-34655069 | None:intergenic | 35.0% | |
GAATTCAGCTGAATCTAAAC+AGG | + | chr4_3:34655247-34655266 | None:intergenic | 35.0% | |
!!! | TTACTTCGGTTTTGATTCTG+CGG | - | chr4_3:34655675-34655694 | Msa0639010:CDS | 35.0% |
ATCTTTCAAACATAGGTGGA+AGG | - | chr4_3:34655816-34655835 | Msa0639010:CDS | 35.0% | |
TAGTACATCAACATTCCACA+TGG | - | chr4_3:34655982-34656001 | Msa0639010:CDS | 35.0% | |
! | TTCGTGCAAGCAAATTTTTC+AGG | - | chr4_3:34656104-34656123 | Msa0639010:CDS | 35.0% |
! | TTTTTACTGCAGGGATATGA+TGG | - | chr4_3:34656201-34656220 | Msa0639010:intron | 35.0% |
TTACCTTAACATCCAAGTAG+TGG | + | chr4_3:34656240-34656259 | None:intergenic | 35.0% | |
! | TTCACACTTGTAATTTCTGG+CGG | - | chr4_3:34656279-34656298 | Msa0639010:intron | 35.0% |
ATACTTGGCTTACTTAAGTG+AGG | + | chr4_3:34656492-34656511 | None:intergenic | 35.0% | |
TAATTTAACCTGTGAATGCG+CGG | - | chr4_3:34656576-34656595 | Msa0639010:CDS | 35.0% | |
AATTTAACCTGTGAATGTGC+GGG | - | chr4_3:34656677-34656696 | Msa0639010:CDS | 35.0% | |
ATATTCGAATCCTATCCAAC+TGG | - | chr4_3:34656798-34656817 | Msa0639010:CDS | 35.0% | |
TAGTCAATAACCAGTTGGAT+AGG | + | chr4_3:34656811-34656830 | None:intergenic | 35.0% | |
TTGCTTAGTCAATAACCAGT+TGG | + | chr4_3:34656816-34656835 | None:intergenic | 35.0% | |
CTACTCAATGAATACAGAGA+CGG | + | chr4_3:34656935-34656954 | None:intergenic | 35.0% | |
!! | CAAAAATTAGCATGGTGGAT+AGG | + | chr4_3:34656966-34656985 | None:intergenic | 35.0% |
! | ATCCACCATGCTAATTTTTG+TGG | - | chr4_3:34656966-34656985 | Msa0639010:intron | 35.0% |
TATTATCTTCCTACAAGGGA+AGG | - | chr4_3:34657183-34657202 | Msa0639010:intron | 35.0% | |
ATTATCTTCCTACAAGGGAA+GGG | - | chr4_3:34657184-34657203 | Msa0639010:intron | 35.0% | |
!! | CCTTTAGAGTCTTAAAAAGG+AGG | + | chr4_3:34657267-34657286 | None:intergenic | 35.0% |
!!! | CCTCCTTTTTAAGACTCTAA+AGG | - | chr4_3:34657264-34657283 | Msa0639010:intron | 35.0% |
!! | TGGCCTTTAGAGTCTTAAAA+AGG | + | chr4_3:34657270-34657289 | None:intergenic | 35.0% |
AAACAGGAAGAAAACTTGTG+AGG | - | chr4_3:34657311-34657330 | Msa0639010:intron | 35.0% | |
! | TTATGGGTTGTTCATCTTTC+AGG | - | chr4_3:34657379-34657398 | Msa0639010:intron | 35.0% |
ATCTGTACTTATGCCTACAT+TGG | + | chr4_3:34657414-34657433 | None:intergenic | 35.0% | |
AGGCATAAGTACAGATACTA+AGG | - | chr4_3:34657418-34657437 | Msa0639010:intron | 35.0% | |
CATAAGTACAGATACTAAGG+AGG | - | chr4_3:34657421-34657440 | Msa0639010:intron | 35.0% | |
GTTACATCAGATTCCCAAAA+GGG | - | chr4_3:34657443-34657462 | Msa0639010:intron | 35.0% | |
!! | TTATGTGAAGATGCTGATTC+AGG | - | chr4_3:34657557-34657576 | Msa0639010:intron | 35.0% |
CTTTCATGAGTTGCATAATC+CGG | - | chr4_3:34657802-34657821 | Msa0639010:CDS | 35.0% | |
TTTCATGAGTTGCATAATCC+GGG | - | chr4_3:34657803-34657822 | Msa0639010:CDS | 35.0% | |
AAGGATAGTAACCTGAAAAC+GGG | + | chr4_3:34657886-34657905 | None:intergenic | 35.0% | |
GGTAAATCCAATTCAAACGA+GGG | - | chr4_3:34658070-34658089 | Msa0639010:CDS | 35.0% | |
GGAAAAGAATTGGATGATAC+AGG | + | chr4_3:34658169-34658188 | None:intergenic | 35.0% | |
AAGACAGACATTGAACTTGA+TGG | + | chr4_3:34658190-34658209 | None:intergenic | 35.0% | |
CTAGTGATATCTTTCGATTG+AGG | - | chr4_3:34658263-34658282 | Msa0639010:intron | 35.0% | |
GGATTGCACTTGAGATTTAT+TGG | - | chr4_3:34658384-34658403 | Msa0639010:CDS | 35.0% | |
!! | ATTTGCTCTGGCTTTAAATG+GGG | + | chr4_3:34658611-34658630 | None:intergenic | 35.0% |
!! | GATTTGCTCTGGCTTTAAAT+GGG | + | chr4_3:34658612-34658631 | None:intergenic | 35.0% |
!! | AGATTTGCTCTGGCTTTAAA+TGG | + | chr4_3:34658613-34658632 | None:intergenic | 35.0% |
! | ATCCATATAGAGATTTGCTC+TGG | + | chr4_3:34658623-34658642 | None:intergenic | 35.0% |
!! | ATGGATTAGCACACTGAAAT+CGG | - | chr4_3:34658637-34658656 | Msa0639010:intron | 35.0% |
TGAACTATTGCCAAACATCT+TGG | - | chr4_3:34658913-34658932 | Msa0639010:intron | 35.0% | |
!! | CATTTTCTTCAAATGGGTTC+TGG | + | chr4_3:34659065-34659084 | None:intergenic | 35.0% |
GAACCCATTTGAAGAAAATG+CGG | - | chr4_3:34659065-34659084 | Msa0639010:intron | 35.0% | |
AACCCATTTGAAGAAAATGC+GGG | - | chr4_3:34659066-34659085 | Msa0639010:intron | 35.0% | |
AATAGGTCAGGATCAATTTC+TGG | + | chr4_3:34659195-34659214 | None:intergenic | 35.0% | |
AATCTTCCCCTGATATTTCA+TGG | - | chr4_3:34659364-34659383 | Msa0639010:intron | 35.0% | |
ATCTTCCCCTGATATTTCAT+GGG | - | chr4_3:34659365-34659384 | Msa0639010:intron | 35.0% | |
TGTGATAGATGATACCTCAT+TGG | - | chr4_3:34659407-34659426 | Msa0639010:intron | 35.0% | |
TAGGCAAGCATTTATTGTTC+TGG | + | chr4_3:34659567-34659586 | None:intergenic | 35.0% | |
GGCAACAATTTATTGTTCTG+TGG | + | chr4_3:34659629-34659648 | None:intergenic | 35.0% | |
AAGCAAACAGTGAAATCATC+AGG | + | chr4_3:34659738-34659757 | None:intergenic | 35.0% | |
!! | ACCATACAGGTGTTGATTAT+TGG | - | chr4_3:34659799-34659818 | Msa0639010:intron | 35.0% |
TCCAATAATCAACACCTGTA+TGG | + | chr4_3:34659803-34659822 | None:intergenic | 35.0% | |
ATTTGTGAATAGTAGACCAG+AGG | - | chr4_3:34659825-34659844 | Msa0639010:intron | 35.0% | |
ACAAGCAAATCTATTGGAGA+AGG | + | chr4_3:34659974-34659993 | None:intergenic | 35.0% | |
ATTTGCTTGTAGTGAAGTTC+AGG | - | chr4_3:34659984-34660003 | Msa0639010:intron | 35.0% | |
TCAGGAATTTGAGTACAAAG+AGG | - | chr4_3:34660002-34660021 | Msa0639010:intron | 35.0% | |
CAGGAATTTGAGTACAAAGA+GGG | - | chr4_3:34660003-34660022 | Msa0639010:intron | 35.0% | |
! | TGAAGGCACATATCTTTCAT+AGG | - | chr4_3:34660259-34660278 | Msa0639010:intron | 35.0% |
TATCTTTCATAGGCAGGTTA+AGG | - | chr4_3:34660269-34660288 | Msa0639010:intron | 35.0% | |
CTTCACAAAGTAACTGAAAC+TGG | - | chr4_3:34660312-34660331 | Msa0639010:CDS | 35.0% | |
CTCATGTGTTTGGTAAAGAT+GGG | - | chr4_3:34660343-34660362 | Msa0639010:CDS | 35.0% | |
!! | AGAAGTTACAATTGGTGCTA+TGG | + | chr4_3:34660412-34660431 | None:intergenic | 35.0% |
ATAGCACCAATTGTAACTTC+TGG | - | chr4_3:34660411-34660430 | Msa0639010:intron | 35.0% | |
!!! | TGCACGTTGCAACTATTTTT+TGG | - | chr4_3:34660542-34660561 | Msa0639010:intron | 35.0% |
! | GGAATTTTCATATCCCCTAA+TGG | + | chr4_3:34660636-34660655 | None:intergenic | 35.0% |
ATTGGTGTACTACTAAAGTC+AGG | - | chr4_3:34660790-34660809 | Msa0639010:intron | 35.0% | |
TGAAGCCTTCAGCATTATTA+AGG | - | chr4_3:34660837-34660856 | Msa0639010:intron | 35.0% | |
GAAGCCTTCAGCATTATTAA+GGG | - | chr4_3:34660838-34660857 | Msa0639010:intron | 35.0% | |
AATGCCCTTAATAATGCTGA+AGG | + | chr4_3:34660845-34660864 | None:intergenic | 35.0% | |
TTATATGCTCAGAGAGAGAA+CGG | - | chr4_3:34660939-34660958 | Msa0639010:CDS | 35.0% | |
GAAAACCTGAAATTCCTTTC+TGG | + | chr4_3:34661068-34661087 | None:intergenic | 35.0% | |
! | GTGGCTAGTTAATAATGACT+CGG | + | chr4_3:34661094-34661113 | None:intergenic | 35.0% |
GATGGCACAAAAGAAACTTT+AGG | - | chr4_3:34661147-34661166 | Msa0639010:intron | 35.0% | |
CAAATACAGAAAAAGTTCCG+TGG | - | chr4_3:34661462-34661481 | Msa0639010:intron | 35.0% | |
TCAAAGAGTTGTCAAAATCC+AGG | - | chr4_3:34661518-34661537 | Msa0639010:intron | 35.0% | |
AATCTAAGAAAAAGAGCAGC+TGG | + | chr4_3:34661549-34661568 | None:intergenic | 35.0% | |
! | ATGGATTTCAAGTCAGTAGA+AGG | + | chr4_3:34661709-34661728 | None:intergenic | 35.0% |
GTTTGTACTTCTTTCTTACC+TGG | + | chr4_3:34661759-34661778 | None:intergenic | 35.0% | |
TCCTGGAGAAGGTTATATTA+CGG | - | chr4_3:34661800-34661819 | Msa0639010:intron | 35.0% | |
TCGATCAGATGCCATTAATA+AGG | - | chr4_3:34661855-34661874 | Msa0639010:intron | 35.0% | |
! | ATCATAGTCATCCTCCTTTT+CGG | + | chr4_3:34661905-34661924 | None:intergenic | 35.0% |
! | GGATGACTATGATTTTCTCA+AGG | - | chr4_3:34661912-34661931 | Msa0639010:intron | 35.0% |
! | GACTATGATTTTCTCAAGGA+AGG | - | chr4_3:34661916-34661935 | Msa0639010:intron | 35.0% |
GAGTGAACAAAAGTTCCAAA+AGG | - | chr4_3:34661948-34661967 | Msa0639010:intron | 35.0% | |
CATGGACTTAACCCTTAAAA+GGG | + | chr4_3:34661974-34661993 | None:intergenic | 35.0% | |
TGATGACAACTTCTTACCTA+TGG | - | chr4_3:34662239-34662258 | Msa0639010:five_prime_UTR | 35.0% | |
CATAGAAGAAAGAAGCTGAC+TGG | - | chr4_3:34653543-34653562 | Msa0639010:three_prime_UTR | 40.0% | |
GAAAAGGAAAGAACGAACGA+CGG | - | chr4_3:34653598-34653617 | Msa0639010:three_prime_UTR | 40.0% | |
GAATGAGAGAAAGATCAACG+CGG | + | chr4_3:34653664-34653683 | None:intergenic | 40.0% | |
ACCTAATCGAAGAGCCATTT+CGG | + | chr4_3:34653746-34653765 | None:intergenic | 40.0% | |
! | GGGTCAACGAAAATCAGTTT+TGG | - | chr4_3:34654230-34654249 | Msa0639010:intron | 40.0% |
AGATGTTAATGTGAGAGGCT+TGG | - | chr4_3:34654332-34654351 | Msa0639010:intron | 40.0% | |
!! | GTACTGATTTCGCCTTTCTT+TGG | - | chr4_3:34654420-34654439 | Msa0639010:CDS | 40.0% |
TTAGTTGGCGACAACTTTGA+AGG | - | chr4_3:34654615-34654634 | Msa0639010:CDS | 40.0% | |
GTGAATTGTGACTGTGTATG+TGG | - | chr4_3:34654852-34654871 | Msa0639010:CDS | 40.0% | |
GCTGAATCTAAACAGGAAGA+CGG | + | chr4_3:34655240-34655259 | None:intergenic | 40.0% | |
GAAAACTCCACAGAATCACA+AGG | + | chr4_3:34655285-34655304 | None:intergenic | 40.0% | |
TAAAGAATACGAGCACTTCG+AGG | - | chr4_3:34655355-34655374 | Msa0639010:intron | 40.0% | |
TTAGAAGGGATGGATACAAC+TGG | - | chr4_3:34655588-34655607 | Msa0639010:CDS | 40.0% | |
GAACGATGGAAAAACTGTGA+AGG | - | chr4_3:34655619-34655638 | Msa0639010:CDS | 40.0% | |
ATTTCCAGAGGCGAAGTTAT+TGG | - | chr4_3:34655886-34655905 | Msa0639010:CDS | 40.0% | |
TGTCCACTACTTGGATGTTA+AGG | - | chr4_3:34656234-34656253 | Msa0639010:intron | 40.0% | |
! | TTTCCTGAAGCACTAAGCAA+AGG | - | chr4_3:34656517-34656536 | Msa0639010:CDS | 40.0% |
CAAAGGCAAGCATACTAACT+TGG | - | chr4_3:34656534-34656553 | Msa0639010:CDS | 40.0% | |
AATTTAACCTGTGAATGCGC+GGG | - | chr4_3:34656577-34656596 | Msa0639010:CDS | 40.0% | |
CTTCATCAAGCATACCAACT+TGG | - | chr4_3:34656634-34656653 | Msa0639010:CDS | 40.0% | |
CGTCTCTGTATTCATTGAGT+AGG | - | chr4_3:34656933-34656952 | Msa0639010:intron | 40.0% | |
AGCCACAAAAATTAGCATGG+TGG | + | chr4_3:34656971-34656990 | None:intergenic | 40.0% | |
GGTAGCCACAAAAATTAGCA+TGG | + | chr4_3:34656974-34656993 | None:intergenic | 40.0% | |
CACAAGATAACTATGGGCAA+TGG | + | chr4_3:34657005-34657024 | None:intergenic | 40.0% | |
TGTAAGAGATGAGTGATGAG+AGG | + | chr4_3:34657124-34657143 | None:intergenic | 40.0% | |
! | GACTCTAAAGGCCATTTCTA+TGG | - | chr4_3:34657276-34657295 | Msa0639010:intron | 40.0% |
CAGGTTAACAAGACCAATGT+AGG | - | chr4_3:34657398-34657417 | Msa0639010:intron | 40.0% | |
GGTTACATCAGATTCCCAAA+AGG | - | chr4_3:34657442-34657461 | Msa0639010:intron | 40.0% | |
! | TGACATAGAACTGCCCTTTT+GGG | + | chr4_3:34657459-34657478 | None:intergenic | 40.0% |
! | ATGACATAGAACTGCCCTTT+TGG | + | chr4_3:34657460-34657479 | None:intergenic | 40.0% |
!! | TCTGGCTTTCCTGCAAATTA+CGG | - | chr4_3:34657479-34657498 | Msa0639010:intron | 40.0% |
! | TTGCTTGGTGAATATCCTCT+GGG | + | chr4_3:34657766-34657785 | None:intergenic | 40.0% |
CGGATTATGCAACTCATGAA+AGG | + | chr4_3:34657804-34657823 | None:intergenic | 40.0% | |
GAAAACGGGTGCATAAGATA+TGG | + | chr4_3:34657872-34657891 | None:intergenic | 40.0% | |
! | TATCTTATGCACCCGTTTTC+AGG | - | chr4_3:34657872-34657891 | Msa0639010:intron | 40.0% |
!! | TTGTTGTGGCCTATTGATTC+AGG | - | chr4_3:34658019-34658038 | Msa0639010:intron | 40.0% |
AAATTACCTCCCACTTGTTC+AGG | - | chr4_3:34658045-34658064 | Msa0639010:CDS | 40.0% | |
AATTACCTCCCACTTGTTCA+GGG | - | chr4_3:34658046-34658065 | Msa0639010:CDS | 40.0% | |
GGGTAAATCCAATTCAAACG+AGG | - | chr4_3:34658069-34658088 | Msa0639010:CDS | 40.0% | |
TTTATCCATGACATTGTCCC+AGG | + | chr4_3:34658119-34658138 | None:intergenic | 40.0% | |
TCAATGTCTGTCTTCAACGA+AGG | - | chr4_3:34658196-34658215 | Msa0639010:intron | 40.0% | |
CACAGTCTCTGCAATCAAAT+TGG | - | chr4_3:34658227-34658246 | Msa0639010:intron | 40.0% | |
AGCCAGAGCAAATCTCTATA+TGG | - | chr4_3:34658618-34658637 | Msa0639010:intron | 40.0% | |
CTGATATAACCAACTTGGGT+TGG | + | chr4_3:34658732-34658751 | None:intergenic | 40.0% | |
CTATTGCCAAACATCTTGGT+AGG | - | chr4_3:34658917-34658936 | Msa0639010:intron | 40.0% | |
! | GACTGAGTAAAGCTCCATTT+TGG | + | chr4_3:34659099-34659118 | None:intergenic | 40.0% |
CTTTACTCAGTCGTTAAGCA+TGG | - | chr4_3:34659107-34659126 | Msa0639010:intron | 40.0% | |
TAACTATTCCGCTGAACTAC+TGG | - | chr4_3:34659140-34659159 | Msa0639010:intron | 40.0% | |
AACTATTCCGCTGAACTACT+GGG | - | chr4_3:34659141-34659160 | Msa0639010:intron | 40.0% | |
AGGTTGACAGCTTCTCTAAA+TGG | - | chr4_3:34659304-34659323 | Msa0639010:intron | 40.0% | |
TCTTCCCCTGATATTTCATG+GGG | - | chr4_3:34659366-34659385 | Msa0639010:intron | 40.0% | |
AGTCATGTATGCTAAACAGC+TGG | + | chr4_3:34659452-34659471 | None:intergenic | 40.0% | |
GAATCAGCATAAGCCCATTT+AGG | + | chr4_3:34659480-34659499 | None:intergenic | 40.0% | |
CCATTAGCTAAAATCGTAGC+TGG | + | chr4_3:34659895-34659914 | None:intergenic | 40.0% | |
!!! | CCAGCTACGATTTTAGCTAA+TGG | - | chr4_3:34659892-34659911 | Msa0639010:intron | 40.0% |
TTGGAGAAGGTTACGTAGAA+AGG | + | chr4_3:34659961-34659980 | None:intergenic | 40.0% | |
AATGCGACATCATTTGCAAC+TGG | - | chr4_3:34660074-34660093 | Msa0639010:CDS | 40.0% | |
ACTGGAGGAGTTACTTACTT+TGG | - | chr4_3:34660092-34660111 | Msa0639010:intron | 40.0% | |
GAAATATCCATCTCTCCAGT+TGG | + | chr4_3:34660228-34660247 | None:intergenic | 40.0% | |
TTAAGGAGAAGCTGTACTCA+TGG | - | chr4_3:34660286-34660305 | Msa0639010:CDS | 40.0% | |
CCATCTTTACCAAACACATG+AGG | + | chr4_3:34660345-34660364 | None:intergenic | 40.0% | |
CCTCATGTGTTTGGTAAAGA+TGG | - | chr4_3:34660342-34660361 | Msa0639010:CDS | 40.0% | |
CTACATTTAGTTGCTGCTCT+TGG | - | chr4_3:34660375-34660394 | Msa0639010:intron | 40.0% | |
TTGCTGCTCTTGGTTATGAT+TGG | - | chr4_3:34660385-34660404 | Msa0639010:intron | 40.0% | |
TGCTGCTCTTGGTTATGATT+GGG | - | chr4_3:34660386-34660405 | Msa0639010:intron | 40.0% | |
ATCAACTTCCGTGATGTGAA+TGG | - | chr4_3:34660441-34660460 | Msa0639010:intron | 40.0% | |
TTAACAAACACGCCAATGGA+TGG | + | chr4_3:34660657-34660676 | None:intergenic | 40.0% | |
GTGATTAACAAACACGCCAA+TGG | + | chr4_3:34660661-34660680 | None:intergenic | 40.0% | |
TCACATGCATGAAAAAGCCA+CGG | + | chr4_3:34660734-34660753 | None:intergenic | 40.0% | |
AATAATGCTGAAGGCTTCAC+AGG | + | chr4_3:34660836-34660855 | None:intergenic | 40.0% | |
CATCCATTGTGAGTGATTCA+AGG | + | chr4_3:34661116-34661135 | None:intergenic | 40.0% | |
TCCTTAAGGCATATAGCATC+TGG | + | chr4_3:34661234-34661253 | None:intergenic | 40.0% | |
CAGCATCAAGAGAATCCTTA+AGG | + | chr4_3:34661248-34661267 | None:intergenic | 40.0% | |
TCAGTATGAAGAGGATGATG+AGG | - | chr4_3:34661344-34661363 | Msa0639010:intron | 40.0% | |
GCTTCTAAGTCAACCAAATC+TGG | - | chr4_3:34661405-34661424 | Msa0639010:intron | 40.0% | |
AAGTCAACCAAATCTGGACA+TGG | - | chr4_3:34661411-34661430 | Msa0639010:intron | 40.0% | |
AGTCAACCAAATCTGGACAT+GGG | - | chr4_3:34661412-34661431 | Msa0639010:intron | 40.0% | |
TATTTGTACTGCAGCAGCAT+TGG | + | chr4_3:34661448-34661467 | None:intergenic | 40.0% | |
TACATGGGCCTTTAACATCA+TGG | + | chr4_3:34661728-34661747 | None:intergenic | 40.0% | |
ATGTTAAAGGCCCATGTAAG+AGG | - | chr4_3:34661730-34661749 | Msa0639010:intron | 40.0% | |
AAACCAATCATTTGGTCCGT+GGG | - | chr4_3:34661775-34661794 | Msa0639010:intron | 40.0% | |
ACCGTAATATAACCTTCTCC+AGG | + | chr4_3:34661804-34661823 | None:intergenic | 40.0% | |
TGGAGAAGGTTATATTACGG+TGG | - | chr4_3:34661803-34661822 | Msa0639010:intron | 40.0% | |
AGAAGGTTATATTACGGTGG+AGG | - | chr4_3:34661806-34661825 | Msa0639010:intron | 40.0% | |
TTGGTTGGGGACCTTATTAA+TGG | + | chr4_3:34661869-34661888 | None:intergenic | 40.0% | |
! | TCATAGTCATCCTCCTTTTC+GGG | + | chr4_3:34661904-34661923 | None:intergenic | 40.0% |
! | ATGATTTTCTCAAGGAAGGG+AGG | - | chr4_3:34661920-34661939 | Msa0639010:intron | 40.0% |
! | AGTTCCAAAAGGCCCTTTTA+AGG | - | chr4_3:34661959-34661978 | Msa0639010:intron | 40.0% |
! | GTTCCAAAAGGCCCTTTTAA+GGG | - | chr4_3:34661960-34661979 | Msa0639010:intron | 40.0% |
! | TAACCCTTAAAAGGGCCTTT+TGG | + | chr4_3:34661966-34661985 | None:intergenic | 40.0% |
CCATGGACTTAACCCTTAAA+AGG | + | chr4_3:34661975-34661994 | None:intergenic | 40.0% | |
!! | CCTTTTAAGGGTTAAGTCCA+TGG | - | chr4_3:34661972-34661991 | Msa0639010:intron | 40.0% |
ATTTAGCAGACGCCTGTATT+GGG | + | chr4_3:34662019-34662038 | None:intergenic | 40.0% | |
GAGTTCGATAAATTCGGAAG+AGG | - | chr4_3:34662170-34662189 | Msa0639010:CDS | 40.0% | |
AAGGATCAATCGAATGCCAT+AGG | + | chr4_3:34662258-34662277 | None:intergenic | 40.0% | |
TCTCCTGTTAATACACTACC+CGG | - | chr4_3:34662298-34662317 | Msa0639010:five_prime_UTR | 40.0% | |
GAGAAAGATCAACGCGGAAA+GGG | + | chr4_3:34653658-34653677 | None:intergenic | 45.0% | |
AGAGAAAGATCAACGCGGAA+AGG | + | chr4_3:34653659-34653678 | None:intergenic | 45.0% | |
CCTAATCGAAGAGCCATTTC+GGG | + | chr4_3:34653745-34653764 | None:intergenic | 45.0% | |
!! | TTCGCCTTTCTTTGGTTCTG+TGG | - | chr4_3:34654428-34654447 | Msa0639010:CDS | 45.0% |
! | AGTTTGAAGCACAGCATCGA+TGG | - | chr4_3:34654946-34654965 | Msa0639010:CDS | 45.0% |
TTACGCCCTGCAGAGATATT+AGG | - | chr4_3:34654969-34654988 | Msa0639010:intron | 45.0% | |
TAGGTAGAAACCATACTCGG+TGG | + | chr4_3:34655047-34655066 | None:intergenic | 45.0% | |
! | TTGAGGCACTTTAGAAGGGA+TGG | - | chr4_3:34655578-34655597 | Msa0639010:CDS | 45.0% |
AACTGGCGAAAGAAGAACGA+TGG | - | chr4_3:34655605-34655624 | Msa0639010:CDS | 45.0% | |
GGAAGCTCATGAGAAGTTGA+AGG | - | chr4_3:34655640-34655659 | Msa0639010:CDS | 45.0% | |
CTTTGCATGAGAGAGACACA+CGG | - | chr4_3:34655708-34655727 | Msa0639010:CDS | 45.0% | |
TTTGCATGAGAGAGACACAC+GGG | - | chr4_3:34655709-34655728 | Msa0639010:CDS | 45.0% | |
TTGCCTTTGCTTAGTGCTTC+AGG | + | chr4_3:34656523-34656542 | None:intergenic | 45.0% | |
GTAATATCCCGCACATTCAC+AGG | + | chr4_3:34656687-34656706 | None:intergenic | 45.0% | |
CTATGGGCAATGGATCCAAT+TGG | + | chr4_3:34656995-34657014 | None:intergenic | 45.0% | |
AATAGAGTCCCTTCCCTTGT+AGG | + | chr4_3:34657195-34657214 | None:intergenic | 45.0% | |
AAGGGCAGTTCTATGTCATC+TGG | - | chr4_3:34657461-34657480 | Msa0639010:intron | 45.0% | |
! | CGCATGTTACCGTAATTTGC+AGG | + | chr4_3:34657491-34657510 | None:intergenic | 45.0% |
! | TAAAGTGCTTGTTGGGCTCA+TGG | + | chr4_3:34657531-34657550 | None:intergenic | 45.0% |
! | CTTGCTTGGTGAATATCCTC+TGG | + | chr4_3:34657767-34657786 | None:intergenic | 45.0% |
GAGTTGCATAATCCGGGAAA+TGG | - | chr4_3:34657809-34657828 | Msa0639010:CDS | 45.0% | |
GCATCAATCTTATCCGTCTG+TGG | + | chr4_3:34657836-34657855 | None:intergenic | 45.0% | |
GCGATGACTCAAGTCATTCT+AGG | - | chr4_3:34657980-34657999 | Msa0639010:intron | 45.0% | |
ATTACCTCCCACTTGTTCAG+GGG | - | chr4_3:34658047-34658066 | Msa0639010:CDS | 45.0% | |
ATTTACCCCCCTGAACAAGT+GGG | + | chr4_3:34658057-34658076 | None:intergenic | 45.0% | |
TCTCTGACCCTCGTTTGAAT+TGG | + | chr4_3:34658080-34658099 | None:intergenic | 45.0% | |
!! | GTCAGAGAGCACTCAACATA+GGG | - | chr4_3:34658092-34658111 | Msa0639010:CDS | 45.0% |
GAATTGGATGATACAGGGGA+AGG | + | chr4_3:34658163-34658182 | None:intergenic | 45.0% | |
TCTGTCTTCAACGAAGGAAG+TGG | - | chr4_3:34658202-34658221 | Msa0639010:intron | 45.0% | |
GTCTCTGCAATCAAATTGGC+AGG | - | chr4_3:34658231-34658250 | Msa0639010:intron | 45.0% | |
GTTGAAGTTGCCTGGGAATA+TGG | - | chr4_3:34658410-34658429 | Msa0639010:CDS | 45.0% | |
!! | AAGGGAGTATCCATATTCCC+AGG | + | chr4_3:34658423-34658442 | None:intergenic | 45.0% |
! | TCCATGGACTGATTAGTCCA+AGG | - | chr4_3:34658556-34658575 | Msa0639010:intron | 45.0% |
! | CCATGGACTGATTAGTCCAA+GGG | - | chr4_3:34658557-34658576 | Msa0639010:intron | 45.0% |
! | CATGGACTGATTAGTCCAAG+GGG | - | chr4_3:34658558-34658577 | Msa0639010:intron | 45.0% |
! | TTTGGAGTATGCTCCTCTCA+AGG | + | chr4_3:34658686-34658705 | None:intergenic | 45.0% |
! | TTGAGAGGAGCATACTCCAA+AGG | - | chr4_3:34658685-34658704 | Msa0639010:intron | 45.0% |
ATAGTTCACGCTCAGTCAAC+AGG | + | chr4_3:34658901-34658920 | None:intergenic | 45.0% | |
CCAAACATCTTGGTAGGAGT+GGG | - | chr4_3:34658923-34658942 | Msa0639010:intron | 45.0% | |
CAAACATCTTGGTAGGAGTG+GGG | - | chr4_3:34658924-34658943 | Msa0639010:intron | 45.0% | |
AAACATCTTGGTAGGAGTGG+GGG | - | chr4_3:34658925-34658944 | Msa0639010:intron | 45.0% | |
! | CGCCCGCATTTTCTTCAAAT+GGG | + | chr4_3:34659071-34659090 | None:intergenic | 45.0% |
CCATTTGAAGAAAATGCGGG+CGG | - | chr4_3:34659069-34659088 | Msa0639010:intron | 45.0% | |
CTGGGTTTGGGTAAAGAAAC+TGG | - | chr4_3:34659159-34659178 | Msa0639010:intron | 45.0% | |
TGTGCGTCAAAACTTGCACA+CGG | - | chr4_3:34659245-34659264 | Msa0639010:intron | 45.0% | |
AGATAGAGACAGGTCCAATG+AGG | + | chr4_3:34659424-34659443 | None:intergenic | 45.0% | |
TGTAGCTGGTCCTGTATGTT+TGG | - | chr4_3:34659856-34659875 | Msa0639010:intron | 45.0% | |
GTAGCTGGTCCTGTATGTTT+GGG | - | chr4_3:34659857-34659876 | Msa0639010:intron | 45.0% | |
TAGCTGGTCCTGTATGTTTG+GGG | - | chr4_3:34659858-34659877 | Msa0639010:intron | 45.0% | |
TTCCACTTCCCCAAACATAC+AGG | + | chr4_3:34659869-34659888 | None:intergenic | 45.0% | |
TCGAGTAATGAAGAGCCAAC+TGG | - | chr4_3:34660210-34660229 | Msa0639010:intron | 45.0% | |
GGCACATATCTTTCATAGGC+AGG | - | chr4_3:34660263-34660282 | Msa0639010:intron | 45.0% | |
GTGTTTGGTAAAGATGGGCA+AGG | - | chr4_3:34660348-34660367 | Msa0639010:CDS | 45.0% | |
ACTTCCGTGATGTGAATGGA+TGG | - | chr4_3:34660445-34660464 | Msa0639010:intron | 45.0% | |
! | CACTGCCCATCTCCATATTT+TGG | - | chr4_3:34660583-34660602 | Msa0639010:intron | 45.0% |
! | TTTTGATGCCTAGTTCACCG+TGG | - | chr4_3:34660714-34660733 | Msa0639010:intron | 45.0% |
TGAAAAAGCCACGGTGAACT+AGG | + | chr4_3:34660725-34660744 | None:intergenic | 45.0% | |
GATGGCCAGAAAGGAATTTC+AGG | - | chr4_3:34661060-34661079 | Msa0639010:intron | 45.0% | |
CCATTGTGAGTGATTCAAGG+TGG | + | chr4_3:34661113-34661132 | None:intergenic | 45.0% | |
CCACCTTGAATCACTCACAA+TGG | - | chr4_3:34661110-34661129 | Msa0639010:intron | 45.0% | |
GCCAGATGCTATATGCCTTA+AGG | - | chr4_3:34661230-34661249 | Msa0639010:intron | 45.0% | |
GAAGAGGATGATGAGGAGTT+TGG | - | chr4_3:34661351-34661370 | Msa0639010:intron | 45.0% | |
GTCAACCAAATCTGGACATG+GGG | - | chr4_3:34661413-34661432 | Msa0639010:intron | 45.0% | |
TACAGAAAAAGTTCCGTGGC+TGG | - | chr4_3:34661466-34661485 | Msa0639010:intron | 45.0% | |
! | CTTTTCTCTTTGTCCAGCCA+CGG | + | chr4_3:34661482-34661501 | None:intergenic | 45.0% |
TACCTGGTGACCTCTTACAT+GGG | + | chr4_3:34661743-34661762 | None:intergenic | 45.0% | |
TTACCTGGTGACCTCTTACA+TGG | + | chr4_3:34661744-34661763 | None:intergenic | 45.0% | |
CAAACCAATCATTTGGTCCG+TGG | - | chr4_3:34661774-34661793 | Msa0639010:intron | 45.0% | |
ATTCCCACGGACCAAATGAT+TGG | + | chr4_3:34661781-34661800 | None:intergenic | 45.0% | |
! | TATATTACGGTGGAGGCGTA+AGG | - | chr4_3:34661813-34661832 | Msa0639010:intron | 45.0% |
! | ATATTACGGTGGAGGCGTAA+GGG | - | chr4_3:34661814-34661833 | Msa0639010:intron | 45.0% |
AGCTTCTGGATACTGAACCA+TGG | + | chr4_3:34661992-34662011 | None:intergenic | 45.0% | |
TGGTTCAGTATCCAGAAGCT+CGG | - | chr4_3:34661992-34662011 | Msa0639010:intron | 45.0% | |
CATTTAGCAGACGCCTGTAT+TGG | + | chr4_3:34662020-34662039 | None:intergenic | 45.0% | |
GGCATTCGATTGATCCTTTG+CGG | - | chr4_3:34662260-34662279 | Msa0639010:five_prime_UTR | 45.0% | |
ATTCGATTGATCCTTTGCGG+TGG | - | chr4_3:34662263-34662282 | Msa0639010:five_prime_UTR | 45.0% | |
GGGTAGTGTATTAACAGGAG+AGG | + | chr4_3:34662299-34662318 | None:intergenic | 45.0% | |
AAGGAAAGAACGAACGACGG+TGG | - | chr4_3:34653601-34653620 | Msa0639010:three_prime_UTR | 50.0% | |
AAAGATCAACGCGGAAAGGG+AGG | + | chr4_3:34653655-34653674 | None:intergenic | 50.0% | |
CCCGAAATGGCTCTTCGATT+AGG | - | chr4_3:34653742-34653761 | Msa0639010:CDS | 50.0% | |
TCTCAAAAGAACCGCCTACC+CGG | - | chr4_3:34655021-34655040 | Msa0639010:intron | 50.0% | |
! | TAGAAACCATACTCGGTGGC+CGG | + | chr4_3:34655043-34655062 | None:intergenic | 50.0% |
TTGGCATCTGGAAGGTTGTC+AGG | + | chr4_3:34655198-34655217 | None:intergenic | 50.0% | |
AACCTTCCAGATGCCAAACG+TGG | - | chr4_3:34655201-34655220 | Msa0639010:intron | 50.0% | |
CCAATTCCAGTCTCCACGTT+TGG | + | chr4_3:34655217-34655236 | None:intergenic | 50.0% | |
CCAAACGTGGAGACTGGAAT+TGG | - | chr4_3:34655214-34655233 | Msa0639010:intron | 50.0% | |
! | GTTGGCTCCTTGTGATTCTG+TGG | - | chr4_3:34655275-34655294 | Msa0639010:intron | 50.0% |
ATACACTGCTACTACGCCCA+TGG | - | chr4_3:34655849-34655868 | Msa0639010:CDS | 50.0% | |
TCCAGAGGCGAAGTTATTGG+AGG | - | chr4_3:34655889-34655908 | Msa0639010:CDS | 50.0% | |
GATGAGTGATGAGAGGAGTG+AGG | + | chr4_3:34657117-34657136 | None:intergenic | 50.0% | |
! | TGCGAAACACTGAGCTTGCT+TGG | + | chr4_3:34657781-34657800 | None:intergenic | 50.0% |
TTACCTCCCACTTGTTCAGG+GGG | - | chr4_3:34658048-34658067 | Msa0639010:CDS | 50.0% | |
GATTTACCCCCCTGAACAAG+TGG | + | chr4_3:34658058-34658077 | None:intergenic | 50.0% | |
!! | GGTCAGAGAGCACTCAACAT+AGG | - | chr4_3:34658091-34658110 | Msa0639010:CDS | 50.0% |
AGCACTCAACATAGGGTCCT+GGG | - | chr4_3:34658099-34658118 | Msa0639010:CDS | 50.0% | |
GGATGATACAGGGGAAGGTT+CGG | + | chr4_3:34658158-34658177 | None:intergenic | 50.0% | |
ATTGGGCTGTTGAAGTTGCC+TGG | - | chr4_3:34658402-34658421 | Msa0639010:CDS | 50.0% | |
TTGGGCTGTTGAAGTTGCCT+GGG | - | chr4_3:34658403-34658422 | Msa0639010:CDS | 50.0% | |
AAAACTCGGAATCCGGTCCA+TGG | - | chr4_3:34658540-34658559 | Msa0639010:intron | 50.0% | |
GGACTAATCAGTCCATGGAC+CGG | + | chr4_3:34658555-34658574 | None:intergenic | 50.0% | |
CCCTTGGACTAATCAGTCCA+TGG | + | chr4_3:34658560-34658579 | None:intergenic | 50.0% | |
TAATTCCGCCGTCCACATCT+GGG | - | chr4_3:34658583-34658602 | Msa0639010:intron | 50.0% | |
TAGCACACTGAAATCGGCAC+CGG | - | chr4_3:34658643-34658662 | Msa0639010:intron | 50.0% | |
ATCGAACCTGAGACCTTGAG+AGG | - | chr4_3:34658670-34658689 | Msa0639010:intron | 50.0% | |
TATGCTCCTCTCAAGGTCTC+AGG | + | chr4_3:34658679-34658698 | None:intergenic | 50.0% | |
!! | TGGTGTTGGCTTAGGACCTT+TGG | + | chr4_3:34658704-34658723 | None:intergenic | 50.0% |
!! | ATAACCAACTTGGGTTGGCC+TGG | + | chr4_3:34658727-34658746 | None:intergenic | 50.0% |
GCCAAACATCTTGGTAGGAG+TGG | - | chr4_3:34658922-34658941 | Msa0639010:intron | 50.0% | |
CCCACTCCTACCAAGATGTT+TGG | + | chr4_3:34658926-34658945 | None:intergenic | 50.0% | |
! | CCGCCCGCATTTTCTTCAAA+TGG | + | chr4_3:34659072-34659091 | None:intergenic | 50.0% |
! | ATGCGGGCGGATTTCCAAAA+TGG | - | chr4_3:34659082-34659101 | Msa0639010:intron | 50.0% |
TTCCGCTGAACTACTGGGTT+TGG | - | chr4_3:34659146-34659165 | Msa0639010:intron | 50.0% | |
TCCGCTGAACTACTGGGTTT+GGG | - | chr4_3:34659147-34659166 | Msa0639010:intron | 50.0% | |
ACCCAAACCCAGTAGTTCAG+CGG | + | chr4_3:34659151-34659170 | None:intergenic | 50.0% | |
! | TGACGCACAGACTGCTCTTT+TGG | + | chr4_3:34659234-34659253 | None:intergenic | 50.0% |
TGCTAAAGAGAGCCTCACGA+AGG | - | chr4_3:34659284-34659303 | Msa0639010:intron | 50.0% | |
AGAAGCTGTCAACCTTCGTG+AGG | + | chr4_3:34659299-34659318 | None:intergenic | 50.0% | |
CGTGCCCCATGAAATATCAG+GGG | + | chr4_3:34659373-34659392 | None:intergenic | 50.0% | |
CCGTGCCCCATGAAATATCA+GGG | + | chr4_3:34659374-34659393 | None:intergenic | 50.0% | |
CCCTGATATTTCATGGGGCA+CGG | - | chr4_3:34659371-34659390 | Msa0639010:intron | 50.0% | |
TCCGTGCCCCATGAAATATC+AGG | + | chr4_3:34659375-34659394 | None:intergenic | 50.0% | |
!! | GCTGGTCTTGAGATAGAGAC+AGG | + | chr4_3:34659434-34659453 | None:intergenic | 50.0% |
GTCCTGTATGTTTGGGGAAG+TGG | - | chr4_3:34659864-34659883 | Msa0639010:intron | 50.0% | |
CAAGCTCCACCTCATGAGAT+TGG | - | chr4_3:34659928-34659947 | Msa0639010:intron | 50.0% | |
CTCCACCTCATGAGATTGGA+CGG | - | chr4_3:34659932-34659951 | Msa0639010:intron | 50.0% | |
TCCACCTCATGAGATTGGAC+GGG | - | chr4_3:34659933-34659952 | Msa0639010:intron | 50.0% | |
GCGACATCATTTGCAACTGG+AGG | - | chr4_3:34660077-34660096 | Msa0639010:CDS | 50.0% | |
TGAAGAGCCAACTGGAGAGA+TGG | - | chr4_3:34660218-34660237 | Msa0639010:intron | 50.0% | |
GGTAAAGGGCCTCATGTGTT+TGG | - | chr4_3:34660333-34660352 | Msa0639010:CDS | 50.0% | |
CCGTCCATCCATTCACATCA+CGG | + | chr4_3:34660452-34660471 | None:intergenic | 50.0% | |
CCGTGATGTGAATGGATGGA+CGG | - | chr4_3:34660449-34660468 | Msa0639010:intron | 50.0% | |
GTTGCTCTCCTTGTCTCCAT+GGG | - | chr4_3:34660961-34660980 | Msa0639010:CDS | 50.0% | |
GTTCTTCCTGAAGGGAATGC+TGG | + | chr4_3:34661018-34661037 | None:intergenic | 50.0% | |
CAGCAGGTGTTCTTCCTGAA+GGG | + | chr4_3:34661026-34661045 | None:intergenic | 50.0% | |
TCAGCAGGTGTTCTTCCTGA+AGG | + | chr4_3:34661027-34661046 | None:intergenic | 50.0% | |
ACACCTGCTGATCTTGCTTC+TGG | - | chr4_3:34661036-34661055 | Msa0639010:intron | 50.0% | |
AATTGCAACGCCTGTGCACT+GGG | - | chr4_3:34661200-34661219 | Msa0639010:intron | 50.0% | |
CAGCGGCTTGTGTAGCATTA+CGG | + | chr4_3:34661272-34661291 | None:intergenic | 50.0% | |
GCAGCTAGCTCAGTATGAAG+AGG | - | chr4_3:34661335-34661354 | Msa0639010:intron | 50.0% | |
AACCAAATCTGGACATGGGG+AGG | - | chr4_3:34661416-34661435 | Msa0639010:intron | 50.0% | |
ACCAAATCTGGACATGGGGA+GGG | - | chr4_3:34661417-34661436 | Msa0639010:intron | 50.0% | |
AAAGAGCAGCTGGATGAACC+TGG | + | chr4_3:34661539-34661558 | None:intergenic | 50.0% | |
TCCAGCCCAATTGCCATAGA+AGG | - | chr4_3:34661598-34661617 | Msa0639010:intron | 50.0% | |
CCCAGCCTTCTATGGCAATT+GGG | + | chr4_3:34661606-34661625 | None:intergenic | 50.0% | |
CCCAATTGCCATAGAAGGCT+GGG | - | chr4_3:34661603-34661622 | Msa0639010:intron | 50.0% | |
CCAATTGCCATAGAAGGCTG+GGG | - | chr4_3:34661604-34661623 | Msa0639010:intron | 50.0% | |
AACCTTCTCCAGGATTCCCA+CGG | + | chr4_3:34661794-34661813 | None:intergenic | 50.0% | |
!! | AGTCATCCTCCTTTTCGGGA+AGG | + | chr4_3:34661900-34661919 | None:intergenic | 50.0% |
GGTTCAGTATCCAGAAGCTC+GGG | - | chr4_3:34661993-34662012 | Msa0639010:intron | 50.0% | |
CAGGCGTCTGCTAAATGTAG+TGG | - | chr4_3:34662023-34662042 | Msa0639010:intron | 50.0% | |
GGACGATTACCGTCAAACCA+AGG | - | chr4_3:34662044-34662063 | Msa0639010:intron | 50.0% | |
AATTCGGAAGAGGCAGCTGA+TGG | - | chr4_3:34662180-34662199 | Msa0639010:CDS | 50.0% | |
! | AGCTGATGGTGTGGAGGATT+TGG | - | chr4_3:34662194-34662213 | Msa0639010:exon | 50.0% |
GAAAGAAGTAGCCACCGCAA+AGG | + | chr4_3:34662277-34662296 | None:intergenic | 50.0% | |
CTGCCGGGTAGTGTATTAAC+AGG | + | chr4_3:34662304-34662323 | None:intergenic | 50.0% | |
! | GGAGCGTTCTTCTCCCGAAA+TGG | - | chr4_3:34653729-34653748 | Msa0639010:CDS | 55.0% |
! | AGAAACCATACTCGGTGGCC+GGG | + | chr4_3:34655042-34655061 | None:intergenic | 55.0% |
CTCCACGTTTGGCATCTGGA+AGG | + | chr4_3:34655206-34655225 | None:intergenic | 55.0% | |
CAGTCTCCACGTTTGGCATC+TGG | + | chr4_3:34655210-34655229 | None:intergenic | 55.0% | |
CAGATGCCAAACGTGGAGAC+TGG | - | chr4_3:34655208-34655227 | Msa0639010:intron | 55.0% | |
ATACGAGCACTTCGAGGCAC+AGG | - | chr4_3:34655361-34655380 | Msa0639010:intron | 55.0% | |
GCCTCCAATAACTTCGCCTC+TGG | + | chr4_3:34655893-34655912 | None:intergenic | 55.0% | |
ACTAGATCCCGCGCATTCAC+AGG | + | chr4_3:34656587-34656606 | None:intergenic | 55.0% | |
TCCGGGAAATGGTCCACAGA+CGG | - | chr4_3:34657820-34657839 | Msa0639010:CDS | 55.0% | |
TCCGTCTGTGGACCATTTCC+CGG | + | chr4_3:34657824-34657843 | None:intergenic | 55.0% | |
TACCTCCCACTTGTTCAGGG+GGG | - | chr4_3:34658049-34658068 | Msa0639010:CDS | 55.0% | |
GAGCACTCAACATAGGGTCC+TGG | - | chr4_3:34658098-34658117 | Msa0639010:CDS | 55.0% | |
AGGGTCCTGGGACAATGTCA+TGG | - | chr4_3:34658111-34658130 | Msa0639010:CDS | 55.0% | |
CTAATTCCGCCGTCCACATC+TGG | - | chr4_3:34658582-34658601 | Msa0639010:intron | 55.0% | |
AATTCCGCCGTCCACATCTG+GGG | - | chr4_3:34658584-34658603 | Msa0639010:intron | 55.0% | |
TTAAATGGGGCCCCCAGATG+TGG | + | chr4_3:34658598-34658617 | None:intergenic | 55.0% | |
AGCACACTGAAATCGGCACC+GGG | - | chr4_3:34658644-34658663 | Msa0639010:intron | 55.0% | |
TCATGGGGCACGGATGAATG+TGG | - | chr4_3:34659381-34659400 | Msa0639010:intron | 55.0% | |
CAGCTACACGTTGTCACCTC+TGG | + | chr4_3:34659844-34659863 | None:intergenic | 55.0% | |
CAGAGGTGACAACGTGTAGC+TGG | - | chr4_3:34659842-34659861 | Msa0639010:intron | 55.0% | |
ACCCGTCCAATCTCATGAGG+TGG | + | chr4_3:34659937-34659956 | None:intergenic | 55.0% | |
GGAACCCGTCCAATCTCATG+AGG | + | chr4_3:34659940-34659959 | None:intergenic | 55.0% | |
ATGGATGGACGGCTCTACAC+TGG | - | chr4_3:34660460-34660479 | Msa0639010:intron | 55.0% | |
TGGATGGACGGCTCTACACT+GGG | - | chr4_3:34660461-34660480 | Msa0639010:intron | 55.0% | |
CTACACTGGGCTGCATCATG+TGG | - | chr4_3:34660474-34660493 | Msa0639010:intron | 55.0% | |
GGTTGCTCTCCTTGTCTCCA+TGG | - | chr4_3:34660960-34660979 | Msa0639010:CDS | 55.0% | |
CCTGAAGGGAATGCTGGACA+TGG | + | chr4_3:34661012-34661031 | None:intergenic | 55.0% | |
CCATGTCCAGCATTCCCTTC+AGG | - | chr4_3:34661009-34661028 | Msa0639010:intron | 55.0% | |
TCGCCAGAAGCAAGATCAGC+AGG | + | chr4_3:34661042-34661061 | None:intergenic | 55.0% | |
GCTGATCTTGCTTCTGGCGA+TGG | - | chr4_3:34661042-34661061 | Msa0639010:intron | 55.0% | |
GAATTGCAACGCCTGTGCAC+TGG | - | chr4_3:34661199-34661218 | Msa0639010:intron | 55.0% | |
ATTGCAACGCCTGTGCACTG+GGG | - | chr4_3:34661201-34661220 | Msa0639010:intron | 55.0% | |
ACCCTCCCCATGTCCAGATT+TGG | + | chr4_3:34661421-34661440 | None:intergenic | 55.0% | |
GCCTTCTATGGCAATTGGGC+TGG | + | chr4_3:34661602-34661621 | None:intergenic | 55.0% | |
GCCCAATTGCCATAGAAGGC+TGG | - | chr4_3:34661602-34661621 | Msa0639010:intron | 55.0% | |
CCCCAGCCTTCTATGGCAAT+TGG | + | chr4_3:34661607-34661626 | None:intergenic | 55.0% | |
ACTCAGTCCCCAGCCTTCTA+TGG | + | chr4_3:34661614-34661633 | None:intergenic | 55.0% | |
CATTTGGTCCGTGGGAATCC+TGG | - | chr4_3:34661783-34661802 | Msa0639010:intron | 55.0% | |
CGTAAGGGCAGTGGTTTACG+TGG | - | chr4_3:34661829-34661848 | Msa0639010:intron | 55.0% | |
! | GAAGGCTGGTTGGTTGGTTG+GGG | + | chr4_3:34661882-34661901 | None:intergenic | 55.0% |
! | GGAAGGCTGGTTGGTTGGTT+GGG | + | chr4_3:34661883-34661902 | None:intergenic | 55.0% |
! | TTTCGGGAAGGCTGGTTGGT+TGG | + | chr4_3:34661888-34661907 | None:intergenic | 55.0% |
ACCAACCAGCCTTCCCGAAA+AGG | - | chr4_3:34661888-34661907 | Msa0639010:intron | 55.0% | |
!! | TCCTTTTCGGGAAGGCTGGT+TGG | + | chr4_3:34661892-34661911 | None:intergenic | 55.0% |
AACCAGCCTTCCCGAAAAGG+AGG | - | chr4_3:34661891-34661910 | Msa0639010:intron | 55.0% | |
!! | ATCCTCCTTTTCGGGAAGGC+TGG | + | chr4_3:34661896-34661915 | None:intergenic | 55.0% |
CTCGGCATGCAACTGCCATG+TGG | + | chr4_3:34656000-34656019 | None:intergenic | 60.0% | |
TACCCCCCTGAACAAGTGGG+AGG | + | chr4_3:34658054-34658073 | None:intergenic | 60.0% | |
GACGGCGGAATTAGACCCCT+TGG | + | chr4_3:34658576-34658595 | None:intergenic | 60.0% | |
ATTCCGCCGTCCACATCTGG+GGG | - | chr4_3:34658585-34658604 | Msa0639010:intron | 60.0% | |
GCACACTGAAATCGGCACCG+GGG | - | chr4_3:34658645-34658664 | Msa0639010:intron | 60.0% | |
! | CACACTGAAATCGGCACCGG+GGG | - | chr4_3:34658646-34658665 | Msa0639010:intron | 60.0% |
GGTCTCAGGTTCGATTCCCC+CGG | + | chr4_3:34658665-34658684 | None:intergenic | 60.0% | |
GGTCCTAAGCCAACACCACC+AGG | - | chr4_3:34658706-34658725 | Msa0639010:intron | 60.0% | |
!! | TGGCCTGGTGGTGTTGGCTT+AGG | + | chr4_3:34658712-34658731 | None:intergenic | 60.0% |
!! | TTGGGTTGGCCTGGTGGTGT+TGG | + | chr4_3:34658718-34658737 | None:intergenic | 60.0% |
ACCACCAGGCCAACCCAAGT+TGG | - | chr4_3:34658720-34658739 | Msa0639010:intron | 60.0% | |
!! | ACCAACTTGGGTTGGCCTGG+TGG | + | chr4_3:34658724-34658743 | None:intergenic | 60.0% |
ACTGGGCTGCATCATGTGGC+AGG | - | chr4_3:34660478-34660497 | Msa0639010:intron | 60.0% | |
CAGCTGCACCCATGGAGACA+AGG | + | chr4_3:34660972-34660991 | None:intergenic | 60.0% | |
GCTTCTGGCGATGGCCAGAA+AGG | - | chr4_3:34661051-34661070 | Msa0639010:intron | 60.0% | |
TTGCAACGCCTGTGCACTGG+GGG | - | chr4_3:34661202-34661221 | Msa0639010:intron | 60.0% | |
GGCCCATGTAAGAGGTCACC+AGG | - | chr4_3:34661738-34661757 | Msa0639010:intron | 60.0% | |
GTCCGTGGGAATCCTGGAGA+AGG | - | chr4_3:34661789-34661808 | Msa0639010:intron | 60.0% | |
! | GGGAAGGCTGGTTGGTTGGT+TGG | + | chr4_3:34661884-34661903 | None:intergenic | 60.0% |
CTGTATTGGGCCCGAGCTTC+TGG | + | chr4_3:34662006-34662025 | None:intergenic | 60.0% | |
CAGAAGCTCGGGCCCAATAC+AGG | - | chr4_3:34662004-34662023 | Msa0639010:intron | 60.0% | |
! | GGAAGAGGCAGCTGATGGTG+TGG | - | chr4_3:34662185-34662204 | Msa0639010:CDS | 60.0% |
! | AGAGGCAGCTGATGGTGTGG+AGG | - | chr4_3:34662188-34662207 | Msa0639010:CDS | 60.0% |
! | ATACTCGGTGGCCGGGTAGG+CGG | + | chr4_3:34655035-34655054 | None:intergenic | 65.0% |
! | ACCATACTCGGTGGCCGGGT+AGG | + | chr4_3:34655038-34655057 | None:intergenic | 65.0% |
ATGGGGCCCCCAGATGTGGA+CGG | + | chr4_3:34658594-34658613 | None:intergenic | 65.0% | |
GTCTCCATGGGTGCAGCTGC+TGG | - | chr4_3:34660973-34660992 | Msa0639010:CDS | 65.0% | |
TGCAACGCCTGTGCACTGGG+GGG | - | chr4_3:34661203-34661222 | Msa0639010:intron | 65.0% | |
GGCATATCCCCCCAGTGCAC+AGG | + | chr4_3:34661213-34661232 | None:intergenic | 65.0% | |
GCCTACCCGGCCACCGAGTA+TGG | - | chr4_3:34655034-34655053 | Msa0639010:intron | 70.0% | |
CGCTCCAGCAGCTGCACCCA+TGG | + | chr4_3:34660980-34660999 | None:intergenic | 70.0% | |
! | CGGTGGAGGCGTAAGGGCAG+TGG | - | chr4_3:34661820-34661839 | Msa0639010:intron | 70.0% |
GGGCCCCCAGATGTGGACGG+CGG | + | chr4_3:34658591-34658610 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_3 | gene | 34653532 | 34662399 | 34653532 | ID=Msa0639010;Name=Msa0639010 |
chr4_3 | mRNA | 34653532 | 34662399 | 34653532 | ID=Msa0639010-mRNA-1;Parent=Msa0639010;Name=Msa0639010-mRNA-1;_AED=0.07;_eAED=0.07;_QI=192|1|1|1|1|1|13|127|1029 |
chr4_3 | exon | 34653532 | 34653772 | 34653532 | ID=Msa0639010-mRNA-1:exon:8076;Parent=Msa0639010-mRNA-1 |
chr4_3 | exon | 34653866 | 34654192 | 34653866 | ID=Msa0639010-mRNA-1:exon:8075;Parent=Msa0639010-mRNA-1 |
chr4_3 | exon | 34654392 | 34654980 | 34654392 | ID=Msa0639010-mRNA-1:exon:8074;Parent=Msa0639010-mRNA-1 |
chr4_3 | exon | 34655432 | 34656123 | 34655432 | ID=Msa0639010-mRNA-1:exon:8073;Parent=Msa0639010-mRNA-1 |
chr4_3 | exon | 34656422 | 34656865 | 34656422 | ID=Msa0639010-mRNA-1:exon:8072;Parent=Msa0639010-mRNA-1 |
chr4_3 | exon | 34657679 | 34657890 | 34657679 | ID=Msa0639010-mRNA-1:exon:8071;Parent=Msa0639010-mRNA-1 |
chr4_3 | exon | 34658038 | 34658163 | 34658038 | ID=Msa0639010-mRNA-1:exon:8070;Parent=Msa0639010-mRNA-1 |
chr4_3 | exon | 34658353 | 34658530 | 34658353 | ID=Msa0639010-mRNA-1:exon:8069;Parent=Msa0639010-mRNA-1 |
chr4_3 | exon | 34659676 | 34659718 | 34659676 | ID=Msa0639010-mRNA-1:exon:8068;Parent=Msa0639010-mRNA-1 |
chr4_3 | exon | 34660012 | 34660100 | 34660012 | ID=Msa0639010-mRNA-1:exon:8067;Parent=Msa0639010-mRNA-1 |
chr4_3 | exon | 34660270 | 34660385 | 34660270 | ID=Msa0639010-mRNA-1:exon:8066;Parent=Msa0639010-mRNA-1 |
chr4_3 | exon | 34660881 | 34661000 | 34660881 | ID=Msa0639010-mRNA-1:exon:8065;Parent=Msa0639010-mRNA-1 |
chr4_3 | exon | 34662168 | 34662399 | 34662168 | ID=Msa0639010-mRNA-1:exon:8064;Parent=Msa0639010-mRNA-1 |
chr4_3 | five_prime_UTR | 34662208 | 34662399 | 34662208 | ID=Msa0639010-mRNA-1:five_prime_utr;Parent=Msa0639010-mRNA-1 |
chr4_3 | CDS | 34662168 | 34662207 | 34662168 | ID=Msa0639010-mRNA-1:cds;Parent=Msa0639010-mRNA-1 |
chr4_3 | CDS | 34660881 | 34661000 | 34660881 | ID=Msa0639010-mRNA-1:cds;Parent=Msa0639010-mRNA-1 |
chr4_3 | CDS | 34660270 | 34660385 | 34660270 | ID=Msa0639010-mRNA-1:cds;Parent=Msa0639010-mRNA-1 |
chr4_3 | CDS | 34660012 | 34660100 | 34660012 | ID=Msa0639010-mRNA-1:cds;Parent=Msa0639010-mRNA-1 |
chr4_3 | CDS | 34659676 | 34659718 | 34659676 | ID=Msa0639010-mRNA-1:cds;Parent=Msa0639010-mRNA-1 |
chr4_3 | CDS | 34658353 | 34658530 | 34658353 | ID=Msa0639010-mRNA-1:cds;Parent=Msa0639010-mRNA-1 |
chr4_3 | CDS | 34658038 | 34658163 | 34658038 | ID=Msa0639010-mRNA-1:cds;Parent=Msa0639010-mRNA-1 |
chr4_3 | CDS | 34657679 | 34657890 | 34657679 | ID=Msa0639010-mRNA-1:cds;Parent=Msa0639010-mRNA-1 |
chr4_3 | CDS | 34656422 | 34656865 | 34656422 | ID=Msa0639010-mRNA-1:cds;Parent=Msa0639010-mRNA-1 |
chr4_3 | CDS | 34655432 | 34656123 | 34655432 | ID=Msa0639010-mRNA-1:cds;Parent=Msa0639010-mRNA-1 |
chr4_3 | CDS | 34654392 | 34654980 | 34654392 | ID=Msa0639010-mRNA-1:cds;Parent=Msa0639010-mRNA-1 |
chr4_3 | CDS | 34653866 | 34654192 | 34653866 | ID=Msa0639010-mRNA-1:cds;Parent=Msa0639010-mRNA-1 |
chr4_3 | CDS | 34653659 | 34653772 | 34653659 | ID=Msa0639010-mRNA-1:cds;Parent=Msa0639010-mRNA-1 |
chr4_3 | three_prime_UTR | 34653532 | 34653658 | 34653532 | ID=Msa0639010-mRNA-1:three_prime_utr;Parent=Msa0639010-mRNA-1 |
Gene Sequence |
Protein sequence |