Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0639620 | XP_013443384.1 | 98.374 | 369 | 6 | 0 | 1 | 369 | 1 | 369 | 0.0 | 757 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0639620 | sp|Q6WUC2|7OMT_PAPSO | 49.575 | 353 | 169 | 5 | 22 | 368 | 5 | 354 | 7.08e-124 | 363 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0639620 | A0A072TIP9 | 98.374 | 369 | 6 | 0 | 1 | 369 | 1 | 369 | 0.0 | 757 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0639620 | Msa0677450 | 0.832477 | 9.244469e-56 | -8.615850e-47 |
| Msa0639620 | Msa0677470 | 0.837418 | 5.258170e-57 | -8.615850e-47 |
| Msa0542320 | Msa0639620 | 0.854047 | 1.596023e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0639620 | MtrunA17_Chr4g0022021 | 98.374 | 369 | 6 | 0 | 1 | 369 | 1 | 369 | 0.0 | 757 |
| Msa0639620 | MtrunA17_Chr4g0021981 | 87.534 | 369 | 46 | 0 | 1 | 369 | 1 | 369 | 0.0 | 684 |
| Msa0639620 | MtrunA17_Chr3g0121301 | 41.056 | 341 | 188 | 6 | 31 | 366 | 27 | 359 | 1.04e-87 | 269 |
| Msa0639620 | MtrunA17_Chr5g0432251 | 41.595 | 351 | 193 | 8 | 25 | 368 | 14 | 359 | 4.14e-79 | 246 |
| Msa0639620 | MtrunA17_Chr5g0432301 | 38.968 | 349 | 203 | 7 | 25 | 367 | 15 | 359 | 1.15e-75 | 238 |
| Msa0639620 | MtrunA17_Chr7g0276401 | 39.178 | 365 | 202 | 10 | 15 | 367 | 18 | 374 | 6.13e-74 | 234 |
| Msa0639620 | MtrunA17_Chr5g0432241 | 37.569 | 362 | 211 | 7 | 18 | 368 | 3 | 360 | 1.14e-70 | 225 |
| Msa0639620 | MtrunA17_Chr7g0276411 | 36.628 | 344 | 195 | 12 | 22 | 349 | 7 | 343 | 4.57e-70 | 223 |
| Msa0639620 | MtrunA17_Chr3g0128011 | 37.798 | 336 | 187 | 11 | 44 | 367 | 90 | 415 | 4.90e-70 | 225 |
| Msa0639620 | MtrunA17_Chr8g0345851 | 45.935 | 246 | 124 | 6 | 107 | 349 | 32 | 271 | 1.55e-66 | 212 |
| Msa0639620 | MtrunA17_Chr5g0448091 | 36.875 | 320 | 188 | 8 | 44 | 354 | 35 | 349 | 1.37e-65 | 212 |
| Msa0639620 | MtrunA17_Chr1g0188391 | 36.490 | 359 | 212 | 9 | 20 | 368 | 9 | 361 | 3.57e-65 | 211 |
| Msa0639620 | MtrunA17_Chr7g0219141 | 34.483 | 377 | 218 | 9 | 1 | 368 | 1 | 357 | 2.82e-64 | 208 |
| Msa0639620 | MtrunA17_Chr8g0367491 | 35.380 | 342 | 198 | 11 | 34 | 358 | 33 | 368 | 6.68e-63 | 205 |
| Msa0639620 | MtrunA17_Chr5g0432211 | 36.158 | 354 | 194 | 7 | 25 | 368 | 14 | 345 | 1.67e-62 | 203 |
| Msa0639620 | MtrunA17_Chr5g0432261 | 36.390 | 349 | 186 | 8 | 25 | 368 | 10 | 327 | 5.72e-62 | 201 |
| Msa0639620 | MtrunA17_Chr4g0040621 | 34.746 | 354 | 210 | 7 | 25 | 368 | 27 | 369 | 1.41e-61 | 202 |
| Msa0639620 | MtrunA17_Chr7g0219161 | 36.023 | 347 | 202 | 9 | 18 | 354 | 7 | 343 | 7.11e-61 | 199 |
| Msa0639620 | MtrunA17_Chr8g0367441 | 34.247 | 365 | 213 | 13 | 5 | 349 | 1 | 358 | 2.45e-59 | 196 |
| Msa0639620 | MtrunA17_Chr7g0223231 | 34.104 | 346 | 216 | 7 | 23 | 365 | 11 | 347 | 4.57e-59 | 194 |
| Msa0639620 | MtrunA17_Chr7g0223241 | 35.191 | 341 | 209 | 7 | 28 | 365 | 16 | 347 | 8.31e-59 | 194 |
| Msa0639620 | MtrunA17_Chr4g0046361 | 32.692 | 364 | 233 | 8 | 13 | 368 | 2 | 361 | 2.08e-57 | 191 |
| Msa0639620 | MtrunA17_Chr8g0367451 | 33.913 | 345 | 208 | 10 | 20 | 353 | 26 | 361 | 2.32e-57 | 191 |
| Msa0639620 | MtrunA17_Chr8g0367501 | 34.311 | 341 | 204 | 11 | 20 | 349 | 13 | 344 | 7.70e-57 | 191 |
| Msa0639620 | MtrunA17_Chr4g0014641 | 33.973 | 365 | 227 | 8 | 14 | 368 | 3 | 363 | 7.10e-56 | 187 |
| Msa0639620 | MtrunA17_Chr1g0188371 | 35.015 | 337 | 206 | 9 | 20 | 348 | 9 | 340 | 1.02e-55 | 187 |
| Msa0639620 | MtrunA17_Chr3g0085211 | 35.625 | 320 | 192 | 10 | 44 | 355 | 43 | 356 | 2.67e-55 | 185 |
| Msa0639620 | MtrunA17_Chr4g0046531 | 33.618 | 351 | 222 | 7 | 23 | 368 | 374 | 718 | 2.47e-53 | 187 |
| Msa0639620 | MtrunA17_Chr4g0046531 | 32.578 | 353 | 225 | 7 | 23 | 369 | 12 | 357 | 2.77e-51 | 182 |
| Msa0639620 | MtrunA17_Chr4g0014561 | 33.983 | 359 | 223 | 8 | 20 | 368 | 9 | 363 | 3.54e-53 | 179 |
| Msa0639620 | MtrunA17_Chr4g0046341 | 34.332 | 367 | 226 | 8 | 13 | 368 | 2 | 364 | 1.28e-52 | 178 |
| Msa0639620 | MtrunA17_Chr4g0014681 | 33.705 | 359 | 224 | 8 | 20 | 368 | 9 | 363 | 1.73e-52 | 178 |
| Msa0639620 | MtrunA17_Chr7g0218261 | 33.731 | 335 | 204 | 12 | 44 | 367 | 40 | 367 | 9.59e-52 | 176 |
| Msa0639620 | MtrunA17_Chr1g0163621 | 33.746 | 323 | 196 | 10 | 44 | 354 | 52 | 368 | 1.13e-51 | 176 |
| Msa0639620 | MtrunA17_Chr3g0130011 | 32.865 | 356 | 226 | 9 | 16 | 365 | 7 | 355 | 1.89e-51 | 175 |
| Msa0639620 | MtrunA17_Chr8g0367381 | 33.033 | 333 | 185 | 9 | 19 | 337 | 19 | 327 | 2.33e-51 | 174 |
| Msa0639620 | MtrunA17_Chr2g0307521 | 35.119 | 336 | 198 | 13 | 44 | 367 | 35 | 362 | 2.75e-51 | 175 |
| Msa0639620 | MtrunA17_Chr7g0218211 | 33.432 | 338 | 204 | 12 | 43 | 367 | 39 | 368 | 5.06e-51 | 174 |
| Msa0639620 | MtrunA17_Chr3g0085201 | 33.125 | 320 | 200 | 9 | 44 | 355 | 30 | 343 | 2.01e-50 | 172 |
| Msa0639620 | MtrunA17_Chr1g0163601 | 34.056 | 323 | 195 | 10 | 44 | 354 | 38 | 354 | 2.48e-50 | 172 |
| Msa0639620 | MtrunA17_Chr1g0163611 | 32.840 | 338 | 207 | 11 | 44 | 367 | 38 | 369 | 3.86e-50 | 172 |
| Msa0639620 | MtrunA17_Chr7g0218181 | 33.851 | 322 | 194 | 11 | 44 | 355 | 41 | 353 | 9.19e-50 | 171 |
| Msa0639620 | MtrunA17_Chr7g0218301 | 32.353 | 340 | 208 | 10 | 44 | 367 | 41 | 374 | 1.23e-49 | 171 |
| Msa0639620 | MtrunA17_Chr2g0314271 | 33.623 | 345 | 218 | 9 | 27 | 365 | 12 | 351 | 1.25e-49 | 170 |
| Msa0639620 | MtrunA17_Chr7g0218271 | 32.941 | 340 | 206 | 10 | 44 | 367 | 41 | 374 | 2.18e-49 | 170 |
| Msa0639620 | MtrunA17_Chr1g0200491 | 34.862 | 327 | 187 | 12 | 44 | 354 | 41 | 357 | 3.27e-49 | 169 |
| Msa0639620 | MtrunA17_Chr7g0218131 | 33.230 | 322 | 197 | 10 | 44 | 354 | 41 | 355 | 9.86e-48 | 166 |
| Msa0639620 | MtrunA17_Chr4g0014661 | 32.231 | 363 | 230 | 8 | 14 | 368 | 3 | 357 | 2.34e-47 | 164 |
| Msa0639620 | MtrunA17_Chr3g0130061 | 30.899 | 356 | 233 | 9 | 16 | 365 | 7 | 355 | 1.99e-46 | 162 |
| Msa0639620 | MtrunA17_Chr4g0014591 | 31.667 | 360 | 236 | 7 | 14 | 368 | 3 | 357 | 4.86e-44 | 155 |
| Msa0639620 | MtrunA17_Chr6g0482291 | 42.073 | 164 | 82 | 5 | 188 | 349 | 5 | 157 | 2.71e-37 | 132 |
| Msa0639620 | MtrunA17_Chr7g0219171 | 45.522 | 134 | 68 | 3 | 238 | 368 | 117 | 248 | 3.38e-32 | 121 |
| Msa0639620 | MtrunA17_Chr4g0014601 | 30.268 | 261 | 178 | 4 | 14 | 273 | 3 | 260 | 6.78e-29 | 113 |
| Msa0639620 | MtrunA17_Chr8g0367401 | 47.273 | 110 | 57 | 1 | 161 | 270 | 2 | 110 | 2.04e-28 | 108 |
| Msa0639620 | MtrunA17_Chr4g0011691 | 44.792 | 96 | 53 | 0 | 272 | 367 | 140 | 235 | 3.09e-25 | 102 |
| Msa0639620 | MtrunA17_Chr1g0170941 | 52.632 | 76 | 35 | 1 | 192 | 267 | 1 | 75 | 2.12e-20 | 84.3 |
| Msa0639620 | MtrunA17_Chr8g0367461 | 44.681 | 94 | 50 | 2 | 257 | 349 | 1 | 93 | 1.99e-19 | 82.8 |
| Msa0639620 | MtrunA17_Chr8g0367391 | 45.349 | 86 | 43 | 4 | 266 | 349 | 32 | 115 | 1.61e-15 | 72.8 |
| Msa0639620 | MtrunA17_Chr8g0367421 | 37.273 | 110 | 51 | 2 | 161 | 270 | 2 | 93 | 2.01e-15 | 72.4 |
| Msa0639620 | MtrunA17_Chr8g0367471 | 44.444 | 72 | 39 | 1 | 188 | 259 | 5 | 75 | 1.38e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0639620 | AT5G54160.1 | 37.500 | 320 | 189 | 6 | 42 | 355 | 34 | 348 | 5.10e-74 | 234 |
| Msa0639620 | AT4G35160.1 | 37.293 | 362 | 206 | 6 | 22 | 367 | 24 | 380 | 2.56e-72 | 230 |
| Msa0639620 | AT1G77520.1 | 35.967 | 367 | 212 | 10 | 17 | 365 | 17 | 378 | 5.06e-64 | 209 |
| Msa0639620 | AT4G35150.1 | 32.303 | 356 | 189 | 6 | 22 | 367 | 10 | 323 | 2.15e-59 | 195 |
| Msa0639620 | AT1G51990.1 | 32.970 | 367 | 220 | 12 | 16 | 368 | 8 | 362 | 4.90e-58 | 192 |
| Msa0639620 | AT1G51990.2 | 32.698 | 367 | 221 | 12 | 16 | 368 | 8 | 362 | 1.72e-55 | 186 |
| Msa0639620 | AT1G77530.1 | 34.465 | 383 | 224 | 13 | 5 | 365 | 1 | 378 | 4.95e-55 | 185 |
| Msa0639620 | AT1G63140.2 | 35.040 | 371 | 218 | 10 | 11 | 365 | 15 | 378 | 5.75e-55 | 185 |
| Msa0639620 | AT1G63140.4 | 35.040 | 371 | 218 | 10 | 11 | 365 | 35 | 398 | 9.24e-55 | 185 |
| Msa0639620 | AT1G33030.1 | 35.329 | 334 | 195 | 12 | 44 | 365 | 23 | 347 | 8.47e-53 | 179 |
| Msa0639620 | AT5G53810.1 | 34.018 | 341 | 203 | 9 | 44 | 367 | 42 | 377 | 2.68e-51 | 176 |
| Msa0639620 | AT3G53140.1 | 32.857 | 350 | 219 | 10 | 27 | 365 | 12 | 356 | 4.08e-48 | 167 |
| Msa0639620 | AT1G62900.1 | 44.776 | 201 | 107 | 3 | 167 | 365 | 4 | 202 | 4.25e-48 | 162 |
| Msa0639620 | AT5G37170.2 | 36.481 | 233 | 141 | 5 | 138 | 365 | 1 | 231 | 1.21e-47 | 162 |
| Msa0639620 | AT1G21130.1 | 36.646 | 322 | 179 | 12 | 44 | 349 | 42 | 354 | 1.64e-47 | 166 |
| Msa0639620 | AT1G21100.1 | 36.335 | 322 | 180 | 11 | 44 | 349 | 42 | 354 | 2.98e-47 | 165 |
| Msa0639620 | AT5G37170.1 | 32.468 | 308 | 177 | 9 | 63 | 365 | 50 | 331 | 2.13e-46 | 161 |
| Msa0639620 | AT1G21120.1 | 35.714 | 322 | 182 | 11 | 44 | 349 | 42 | 354 | 1.28e-45 | 160 |
| Msa0639620 | AT1G21110.1 | 34.451 | 328 | 190 | 11 | 44 | 355 | 42 | 360 | 3.65e-45 | 159 |
| Msa0639620 | AT1G21120.2 | 35.714 | 322 | 182 | 11 | 44 | 349 | 90 | 402 | 4.74e-45 | 160 |
| Msa0639620 | AT1G76790.1 | 34.897 | 341 | 191 | 12 | 45 | 365 | 33 | 362 | 5.41e-44 | 156 |
| Msa0639620 | AT5G37170.3 | 40.110 | 182 | 104 | 4 | 187 | 365 | 4 | 183 | 1.96e-42 | 146 |
| Msa0639620 | AT1G33030.2 | 34.599 | 237 | 138 | 9 | 44 | 270 | 23 | 252 | 4.51e-28 | 111 |
| Msa0639620 | AT1G33030.3 | 34.599 | 237 | 138 | 9 | 44 | 270 | 23 | 252 | 9.03e-28 | 110 |
| Msa0639620 | AT1G63140.1 | 31.752 | 274 | 167 | 8 | 11 | 270 | 35 | 302 | 1.61e-27 | 110 |
| Msa0639620 | AT1G21130.2 | 34.025 | 241 | 137 | 10 | 44 | 270 | 42 | 274 | 5.82e-22 | 95.1 |
| Msa0639620 | AT1G63140.3 | 29.644 | 253 | 158 | 8 | 11 | 249 | 35 | 281 | 4.94e-18 | 84.0 |
| Msa0639620 | AT1G77530.2 | 30.566 | 265 | 160 | 11 | 5 | 249 | 1 | 261 | 7.06e-18 | 83.2 |
Find 79 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTCCACCTTCTGCCTTTA+AGG | 0.035762 | 4_3:-36152069 | Msa0639620:intron |
| TTAAACAACTCATTGAATTT+TGG | 0.113417 | 4_3:+36148801 | None:intergenic |
| CATCAACCAATGTTTGAATT+TGG | 0.182200 | 4_3:+36148709 | None:intergenic |
| ATTTCACTCATAAAGTTAAA+AGG | 0.207818 | 4_3:+36148903 | None:intergenic |
| TGCTTGGACAAATTGAAATA+TGG | 0.256837 | 4_3:-36149247 | Msa0639620:CDS |
| TCAACATCCACGCACCTTAA+AGG | 0.284260 | 4_3:+36152055 | None:intergenic |
| AAAATGGCACTGCTTTCTTT+AGG | 0.298524 | 4_3:-36148863 | Msa0639620:CDS |
| GCTATGCCAATGTCAGTAAA+TGG | 0.312596 | 4_3:+36146956 | None:intergenic |
| GTTGATGTTGGTGGTGGTAT+TGG | 0.312678 | 4_3:-36148693 | Msa0639620:CDS |
| GCTTGACACGTGCATCAAAA+TGG | 0.313818 | 4_3:-36148995 | Msa0639620:CDS |
| CAACACTAGCCATTTCAAAT+TGG | 0.315929 | 4_3:+36148826 | None:intergenic |
| GGCAGAAGGTGGAGAGTGAT+TGG | 0.355201 | 4_3:+36152076 | None:intergenic |
| ATTCTGCACAATTTGAGTTA+AGG | 0.365186 | 4_3:+36149130 | None:intergenic |
| GTAAATGGTTCATCTCCTTC+TGG | 0.366037 | 4_3:+36146971 | None:intergenic |
| AACAGGAAAGGTGATAATAT+TGG | 0.375818 | 4_3:-36147008 | Msa0639620:CDS |
| GTGTTTAGAGCTGTTATTGC+TGG | 0.403865 | 4_3:-36148750 | Msa0639620:CDS |
| GATTGGAAATGCTTCAATGA+TGG | 0.406919 | 4_3:+36146808 | None:intergenic |
| AAAGGACAAGCATGCACAAC+TGG | 0.416268 | 4_3:-36148777 | Msa0639620:CDS |
| TGGTTATGACCAATTTGAAA+TGG | 0.426665 | 4_3:-36148835 | Msa0639620:CDS |
| GATAATATTGGATCATGTAT+TGG | 0.435063 | 4_3:-36146996 | Msa0639620:CDS |
| CTTAAAAGTAGAGTGGAATC+AGG | 0.438559 | 4_3:+36149089 | None:intergenic |
| ATGAGTGAAATTGTAAAAGA+AGG | 0.441259 | 4_3:-36148891 | Msa0639620:CDS |
| TTAAAAGGGTTCATATGAGT+TGG | 0.444485 | 4_3:+36148918 | None:intergenic |
| TTTCACTCATAAAGTTAAAA+GGG | 0.448814 | 4_3:+36148904 | None:intergenic |
| ACTGCTTTCTTTAGGTGTCA+TGG | 0.450664 | 4_3:-36148855 | Msa0639620:CDS |
| ATGGGTGATGCCATCATACT+TGG | 0.452889 | 4_3:+36148587 | None:intergenic |
| TAAAAGGGTTCATATGAGTT+GGG | 0.453853 | 4_3:+36148919 | None:intergenic |
| GTTATTGCTGGATACAAAGA+TGG | 0.468883 | 4_3:-36148738 | Msa0639620:CDS |
| GCAAATCAAAATTAATACCT+TGG | 0.471241 | 4_3:+36148631 | None:intergenic |
| AAGGCAATACCAGAGAAAAC+AGG | 0.476074 | 4_3:-36147025 | Msa0639620:CDS |
| AGGAAAGGACTGAAGAGAAC+TGG | 0.477263 | 4_3:-36146895 | Msa0639620:CDS |
| AAAAGTGACATTGGCACCAT+TGG | 0.485135 | 4_3:-36148958 | Msa0639620:CDS |
| GATGAACCATTTACTGACAT+TGG | 0.495764 | 4_3:-36146962 | Msa0639620:CDS |
| TGCACACAACTCTGGTGGTA+AGG | 0.502617 | 4_3:-36146915 | Msa0639620:CDS |
| GAACATGTCTCCTCCAACAT+GGG | 0.506646 | 4_3:+36148569 | None:intergenic |
| GATGTTGGTGGTGGTATTGG+CGG | 0.508464 | 4_3:-36148690 | Msa0639620:CDS |
| TTTAAGAGTAATGAGAGTAA+TGG | 0.509813 | 4_3:-36149072 | Msa0639620:CDS |
| AGATACTTATTCAAAGAGAC+AGG | 0.514708 | 4_3:-36146872 | Msa0639620:CDS |
| GGTAGTGGATTCTTCATGAC+TGG | 0.515619 | 4_3:-36147087 | Msa0639620:intron |
| ATTTAACCAAATTCAAACAT+TGG | 0.521052 | 4_3:-36148715 | Msa0639620:CDS |
| TTCAATGAGTTGTTTAACAA+AGG | 0.521127 | 4_3:-36148795 | Msa0639620:CDS |
| CTAGGGTGTGAGCAAGGAAG+AGG | 0.523226 | 4_3:-36149279 | Msa0639620:intron |
| CAAACATTGGTTGATGTTGG+TGG | 0.526942 | 4_3:-36148702 | Msa0639620:CDS |
| ATTCAAACATTGGTTGATGT+TGG | 0.530112 | 4_3:-36148705 | Msa0639620:CDS |
| TCTTCAATATCTTTATGCAA+TGG | 0.534210 | 4_3:+36147056 | None:intergenic |
| TAAAGATATTGAAGAACTGT+AGG | 0.535387 | 4_3:-36147048 | Msa0639620:CDS |
| TGCTGATGCTATTTACATCA+AGG | 0.535867 | 4_3:-36148532 | Msa0639620:intron |
| CGAACATGTCTCCTCCAACA+TGG | 0.536309 | 4_3:+36148568 | None:intergenic |
| AATTAATACCTTGGATGTGA+GGG | 0.541352 | 4_3:+36148640 | None:intergenic |
| TCAACGGCACCCAAGTATGA+TGG | 0.541751 | 4_3:-36148597 | Msa0639620:CDS |
| AAGTAGAGTGGAATCAGGAG+AGG | 0.545001 | 4_3:+36149094 | None:intergenic |
| GAAGAGGAGGAATCATTGCT+TGG | 0.551152 | 4_3:-36149263 | Msa0639620:CDS |
| TTTGCCTCATGTTGTTTCAA+CGG | 0.559425 | 4_3:-36148613 | Msa0639620:CDS |
| AAATTAATACCTTGGATGTG+AGG | 0.559777 | 4_3:+36148639 | None:intergenic |
| GATGGCATCACCCATGTTGG+AGG | 0.561480 | 4_3:-36148579 | Msa0639620:CDS |
| ATATTGTTTGCACACAACTC+TGG | 0.563913 | 4_3:-36146923 | Msa0639620:CDS |
| TATGATGGCATCACCCATGT+TGG | 0.578808 | 4_3:-36148582 | Msa0639620:CDS |
| ACAAGACACAAAAGTGACAT+TGG | 0.586673 | 4_3:-36148967 | Msa0639620:CDS |
| GGGTGTGAGCAAGGAAGAGG+AGG | 0.586759 | 4_3:-36149276 | Msa0639620:CDS |
| CATTACTCTTAAAAGTAGAG+TGG | 0.588009 | 4_3:+36149082 | None:intergenic |
| ATGTAAATAGCATCAGCACT+AGG | 0.594614 | 4_3:+36148537 | None:intergenic |
| GATATTGAAGAACTGTAGGA+AGG | 0.597258 | 4_3:-36147044 | Msa0639620:CDS |
| ACATTGGTTGATGTTGGTGG+TGG | 0.602342 | 4_3:-36148699 | Msa0639620:CDS |
| AGGATAGCGGTTTACACTGA+CGG | 0.604044 | 4_3:+36149150 | None:intergenic |
| CGCACCTTAAAGGCAGAAGG+TGG | 0.612114 | 4_3:+36152065 | None:intergenic |
| AGTAGAGTGGAATCAGGAGA+GGG | 0.613280 | 4_3:+36149095 | None:intergenic |
| AAAGCTTACCCTCACATCCA+AGG | 0.615664 | 4_3:-36148648 | Msa0639620:CDS |
| ACAACTCTGGTGGTAAGGAA+AGG | 0.616165 | 4_3:-36146910 | Msa0639620:CDS |
| AAATGACTAGGGTGTGAGCA+AGG | 0.619206 | 4_3:-36149285 | Msa0639620:intron |
| ACAATTTGAGTTAAGGATAG+CGG | 0.620633 | 4_3:+36149137 | None:intergenic |
| TTGTTTGCACACAACTCTGG+TGG | 0.628395 | 4_3:-36146920 | Msa0639620:CDS |
| CCACGCACCTTAAAGGCAGA+AGG | 0.632006 | 4_3:+36152062 | None:intergenic |
| GAAACCGGCGAAATTCTCTA+CGG | 0.639770 | 4_3:-36149017 | Msa0639620:CDS |
| CAAGCCGTAGAGAATTTCGC+CGG | 0.643000 | 4_3:+36149013 | None:intergenic |
| GATCATGTATTGGATCCAGA+AGG | 0.647337 | 4_3:-36146986 | Msa0639620:CDS |
| TGAGTCTCTAGTAACACCAA+TGG | 0.648452 | 4_3:+36148942 | None:intergenic |
| TGGGTGATGCCATCATACTT+GGG | 0.669553 | 4_3:+36148588 | None:intergenic |
| AATACCAGAGAAAACAGGAA+AGG | 0.671132 | 4_3:-36147020 | Msa0639620:CDS |
| GGTGCCGTTGAAACAACATG+AGG | 0.720627 | 4_3:+36148609 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAATATTAATTTTAAAA+AGG | + | chr4_3:36147493-36147512 | None:intergenic | 0.0% |
| !!! | AATATATAATTTTAAAATAT+TGG | + | chr4_3:36149405-36149424 | None:intergenic | 0.0% |
| !! | TTAAAAAAATCAATAATTTG+AGG | - | chr4_3:36147776-36147795 | Msa0639620:intron | 10.0% |
| !!! | GTTAAAAAATTCTAATTTTT+TGG | - | chr4_3:36148885-36148904 | Msa0639620:CDS | 10.0% |
| !!! | ACAATTTCTTTTTTTTTTTA+GGG | + | chr4_3:36149462-36149481 | None:intergenic | 10.0% |
| !!! | TACAATTTCTTTTTTTTTTT+AGG | + | chr4_3:36149463-36149482 | None:intergenic | 10.0% |
| !! | AAGTAATGTATAAATTTAAT+TGG | + | chr4_3:36149554-36149573 | None:intergenic | 10.0% |
| !!! | GTTAATTCTATTTTATTATA+GGG | + | chr4_3:36151585-36151604 | None:intergenic | 10.0% |
| !!! | TGTTAATTCTATTTTATTAT+AGG | + | chr4_3:36151586-36151605 | None:intergenic | 10.0% |
| !! | AATAAAATAGAATTAACAAT+CGG | - | chr4_3:36151588-36151607 | Msa0639620:intron | 10.0% |
| !! | AATTAGGATTGTTAATTATT+TGG | + | chr4_3:36146948-36146967 | None:intergenic | 15.0% |
| !!! | ATAATTAACAATCCTAATTT+TGG | - | chr4_3:36146949-36146968 | Msa0639620:CDS | 15.0% |
| !! | TATATATATATATTGAACTG+TGG | - | chr4_3:36147202-36147221 | Msa0639620:intron | 15.0% |
| !! | ATATAAGTAATATATGCATT+TGG | - | chr4_3:36147640-36147659 | Msa0639620:intron | 15.0% |
| !! | GAATTAAACATGAATTAAAT+TGG | + | chr4_3:36148755-36148774 | None:intergenic | 15.0% |
| !! | AACAAAACATGAATTAAATA+CGG | + | chr4_3:36148868-36148887 | None:intergenic | 15.0% |
| !!! | ACATGATTTGTTTTAAAAAT+AGG | - | chr4_3:36148970-36148989 | Msa0639620:CDS | 15.0% |
| !!! | CATGATTTGTTTTAAAAATA+GGG | - | chr4_3:36148971-36148990 | Msa0639620:CDS | 15.0% |
| !!! | AATGAAATTCACTAATTTTT+GGG | + | chr4_3:36149103-36149122 | None:intergenic | 15.0% |
| !!! | TAATGAAATTCACTAATTTT+TGG | + | chr4_3:36149104-36149123 | None:intergenic | 15.0% |
| !! | TGTTTGAAAAAAAATATTAG+AGG | - | chr4_3:36149342-36149361 | Msa0639620:intron | 15.0% |
| !! | TATAAACTGTGATTAATAAT+GGG | + | chr4_3:36149593-36149612 | None:intergenic | 15.0% |
| !! | TTATAAACTGTGATTAATAA+TGG | + | chr4_3:36149594-36149613 | None:intergenic | 15.0% |
| !! | TACTAAATATACGTTATAAA+TGG | - | chr4_3:36150562-36150581 | Msa0639620:intron | 15.0% |
| !!! | AAATACGTCTTTTAAATTTT+AGG | - | chr4_3:36150765-36150784 | Msa0639620:intron | 15.0% |
| !!! | GAACTCATAATAATTTTATT+GGG | + | chr4_3:36150915-36150934 | None:intergenic | 15.0% |
| !!! | TGAACTCATAATAATTTTAT+TGG | + | chr4_3:36150916-36150935 | None:intergenic | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr4_3:36151219-36151238 | None:intergenic | 15.0% |
| !! | AAATTATCCATATTAACTAT+TGG | + | chr4_3:36151243-36151262 | None:intergenic | 15.0% |
| !! | AATAGTTAATATGGATAATT+TGG | - | chr4_3:36151242-36151261 | Msa0639620:intron | 15.0% |
| !!! | TGTTTTTTTAACTAGTATTT+TGG | - | chr4_3:36151462-36151481 | Msa0639620:intron | 15.0% |
| !!! | GTTTTTTTAACTAGTATTTT+GGG | - | chr4_3:36151463-36151482 | Msa0639620:intron | 15.0% |
| !!! | AAGCCTTTATTTTATTTTTT+CGG | + | chr4_3:36151546-36151565 | None:intergenic | 15.0% |
| !! | TAGAATTAGTTGAATATTAA+CGG | - | chr4_3:36151708-36151727 | Msa0639620:intron | 15.0% |
| !! | GTCTAACTATAAATATAAAA+TGG | - | chr4_3:36151730-36151749 | Msa0639620:intron | 15.0% |
| !! | TTCTAACAATAAATCTTGAT+TGG | - | chr4_3:36147952-36147971 | Msa0639620:intron | 20.0% |
| !! | ATTATCACTTATGTATCATT+GGG | - | chr4_3:36148077-36148096 | Msa0639620:intron | 20.0% |
| !! | ATATATGCATATGAAGAAAA+AGG | - | chr4_3:36148172-36148191 | Msa0639620:intron | 20.0% |
| !!! | TGGTGATTGTAAATTTTATA+GGG | - | chr4_3:36149002-36149021 | Msa0639620:CDS | 20.0% |
| !! | TTAGTGAATTTCATTAAGAT+AGG | - | chr4_3:36149108-36149127 | Msa0639620:CDS | 20.0% |
| !! | ACAAAAGATGATACATTTAT+AGG | + | chr4_3:36149238-36149257 | None:intergenic | 20.0% |
| !! | AATTAAGTTCTCATTGATAA+AGG | + | chr4_3:36149294-36149313 | None:intergenic | 20.0% |
| !! | TTTCACTCATAAAGTTAAAA+GGG | + | chr4_3:36149996-36150015 | None:intergenic | 20.0% |
| !! | ATTTCACTCATAAAGTTAAA+AGG | + | chr4_3:36149997-36150016 | None:intergenic | 20.0% |
| !!! | TAAACAACTCATTGAATTTT+GGG | + | chr4_3:36150098-36150117 | None:intergenic | 20.0% |
| !!! | TTAAACAACTCATTGAATTT+TGG | + | chr4_3:36150099-36150118 | None:intergenic | 20.0% |
| !! | ATTTAACCAAATTCAAACAT+TGG | - | chr4_3:36150182-36150201 | Msa0639620:intron | 20.0% |
| !! | AAAAAATATCCAAAAGTTTG+TGG | + | chr4_3:36150854-36150873 | None:intergenic | 20.0% |
| !!! | ATAATAATTTTATTGGGTGA+TGG | + | chr4_3:36150909-36150928 | None:intergenic | 20.0% |
| !! | AAAGAGAAAAATGTAGTATT+AGG | + | chr4_3:36151031-36151050 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+TGG | - | chr4_3:36151233-36151252 | Msa0639620:intron | 20.0% |
| !!! | AATATATAAGTTTTGCATTG+AGG | + | chr4_3:36151434-36151453 | None:intergenic | 20.0% |
| !! | TCTTGAGAATAAAAAAGAAT+TGG | + | chr4_3:36151506-36151525 | None:intergenic | 20.0% |
| !! | TACCCGAAAAAATAAAATAA+AGG | - | chr4_3:36151540-36151559 | Msa0639620:intron | 20.0% |
| !!! | AGCCTTTATTTTATTTTTTC+GGG | + | chr4_3:36151545-36151564 | None:intergenic | 20.0% |
| !!! | AATGAATATTTTTGTGTGAA+TGG | - | chr4_3:36151788-36151807 | Msa0639620:intron | 20.0% |
| !!! | ATGAATATTTTTGTGTGAAT+GGG | - | chr4_3:36151789-36151808 | Msa0639620:intron | 20.0% |
| !!! | CACACACTAAACATATTTTT+TGG | - | chr4_3:36146892-36146911 | Msa0639620:CDS | 25.0% |
| !! | ACTCTTTCTAAAAAGTAAGT+GGG | + | chr4_3:36147023-36147042 | None:intergenic | 25.0% |
| !! | TACTCTTTCTAAAAAGTAAG+TGG | + | chr4_3:36147024-36147043 | None:intergenic | 25.0% |
| ! | TCATTATTTGTGTTTGCTTT+AGG | + | chr4_3:36147468-36147487 | None:intergenic | 25.0% |
| ! | TAACAAAATCAACACTTTCA+TGG | - | chr4_3:36147688-36147707 | Msa0639620:intron | 25.0% |
| ! | TATTGATGTGATATTAAGAG+AGG | - | chr4_3:36147849-36147868 | Msa0639620:intron | 25.0% |
| ! | GATTATCACTTATGTATCAT+TGG | - | chr4_3:36148076-36148095 | Msa0639620:intron | 25.0% |
| ! | CTATTGAGATACTAATACAA+TGG | + | chr4_3:36148206-36148225 | None:intergenic | 25.0% |
| ! | CTGACAATATGTTTATAAGT+GGG | - | chr4_3:36148627-36148646 | Msa0639620:CDS | 25.0% |
| ! | TGACAATATGTTTATAAGTG+GGG | - | chr4_3:36148628-36148647 | Msa0639620:CDS | 25.0% |
| !!! | CTCTGATTTGTTGAAAATTA+GGG | + | chr4_3:36148697-36148716 | None:intergenic | 25.0% |
| ! | ATGTTTAATTCCGTATTCTA+AGG | - | chr4_3:36148764-36148783 | Msa0639620:CDS | 25.0% |
| ! | TTAAAAATAGGGATCAAAAG+TGG | - | chr4_3:36148982-36149001 | Msa0639620:CDS | 25.0% |
| !! | GTGGTGATTGTAAATTTTAT+AGG | - | chr4_3:36149001-36149020 | Msa0639620:CDS | 25.0% |
| !! | ACTAAGTCGAATGAAAATTT+TGG | - | chr4_3:36149025-36149044 | Msa0639620:CDS | 25.0% |
| ! | AGGATTATAAACTACTTTCA+TGG | + | chr4_3:36149218-36149237 | None:intergenic | 25.0% |
| !! | TTTTTAATCCCTCTATACAA+TGG | - | chr4_3:36149257-36149276 | Msa0639620:CDS | 25.0% |
| ! | AAAAAAACGAACGTAAAAAG+TGG | - | chr4_3:36149365-36149384 | Msa0639620:intron | 25.0% |
| !!! | TTTGTATTCCTTTAAAGTAG+AGG | - | chr4_3:36149488-36149507 | Msa0639620:intron | 25.0% |
| !!! | TTGTATTCCTTTAAAGTAGA+GGG | - | chr4_3:36149489-36149508 | Msa0639620:intron | 25.0% |
| !! | TTTTTACCTTTTTGTGGATT+TGG | + | chr4_3:36149516-36149535 | None:intergenic | 25.0% |
| ! | ATCACAGTTTATAAATGACT+AGG | - | chr4_3:36149600-36149619 | Msa0639620:intron | 25.0% |
| ! | TCACAGTTTATAAATGACTA+GGG | - | chr4_3:36149601-36149620 | Msa0639620:intron | 25.0% |
| ! | TTTAAGAGTAATGAGAGTAA+TGG | - | chr4_3:36149825-36149844 | Msa0639620:intron | 25.0% |
| ! | ATGAGTGAAATTGTAAAAGA+AGG | - | chr4_3:36150006-36150025 | Msa0639620:intron | 25.0% |
| ! | TTCAATGAGTTGTTTAACAA+AGG | - | chr4_3:36150102-36150121 | Msa0639620:intron | 25.0% |
| ! | GCAAATCAAAATTAATACCT+TGG | + | chr4_3:36150269-36150288 | None:intergenic | 25.0% |
| !! | TCGATGAATTTTGTCTATTT+TGG | - | chr4_3:36150638-36150657 | Msa0639620:intron | 25.0% |
| !! | CGATGAATTTTGTCTATTTT+GGG | - | chr4_3:36150639-36150658 | Msa0639620:intron | 25.0% |
| !!! | CTGAATTTTAGGATTTAAGT+CGG | - | chr4_3:36150710-36150729 | Msa0639620:intron | 25.0% |
| !!! | TGAATTTTAGGATTTAAGTC+GGG | - | chr4_3:36150711-36150730 | Msa0639620:intron | 25.0% |
| ! | AATGAGTAAAAGAAAGAGAA+TGG | + | chr4_3:36151276-36151295 | None:intergenic | 25.0% |
| ! | AATGAGAGTCAAATACATAT+AGG | + | chr4_3:36151382-36151401 | None:intergenic | 25.0% |
| !! | TTTTTATTCTCAAGATGTGA+AGG | - | chr4_3:36151511-36151530 | Msa0639620:intron | 25.0% |
| ! | TCTTCAATATCTTTATGCAA+TGG | + | chr4_3:36151844-36151863 | None:intergenic | 25.0% |
| ! | TAAAGATATTGAAGAACTGT+AGG | - | chr4_3:36151849-36151868 | Msa0639620:intron | 25.0% |
| ! | GATAATATTGGATCATGTAT+TGG | - | chr4_3:36151901-36151920 | Msa0639620:intron | 25.0% |
| ACAATACTAAGGCCAAAATT+AGG | + | chr4_3:36146964-36146983 | None:intergenic | 30.0% | |
| GCAAGTGAATAACTAAAAAG+TGG | - | chr4_3:36147049-36147068 | Msa0639620:CDS | 30.0% | |
| ! | AAGAACTTTTGCAGTTAATG+TGG | + | chr4_3:36147274-36147293 | None:intergenic | 30.0% |
| TAACTGCAAAAGTTCTTCTA+TGG | - | chr4_3:36147277-36147296 | Msa0639620:intron | 30.0% | |
| ! | GGGTATAATTGTTGTTAAGA+AGG | - | chr4_3:36147302-36147321 | Msa0639620:intron | 30.0% |
| TATCGTCTCAATCAATATAG+CGG | - | chr4_3:36147442-36147461 | Msa0639620:intron | 30.0% | |
| TTAATGCATCACATTCACAA+AGG | - | chr4_3:36148054-36148073 | Msa0639620:intron | 30.0% | |
| AAGTGATATCCCATCATAAA+TGG | - | chr4_3:36148231-36148250 | Msa0639620:intron | 30.0% | |
| CTTGATGAGAGTTTATAAAG+AGG | - | chr4_3:36148313-36148332 | Msa0639620:intron | 30.0% | |
| CCACTTATAAACATATTGTC+AGG | + | chr4_3:36148629-36148648 | None:intergenic | 30.0% | |
| CCTGACAATATGTTTATAAG+TGG | - | chr4_3:36148626-36148645 | Msa0639620:CDS | 30.0% | |
| GACAATATGTTTATAAGTGG+GGG | - | chr4_3:36148629-36148648 | Msa0639620:CDS | 30.0% | |
| CTAACTCTTCCTTACAAAAT+CGG | + | chr4_3:36148673-36148692 | None:intergenic | 30.0% | |
| !! | GCTCTGATTTGTTGAAAATT+AGG | + | chr4_3:36148698-36148717 | None:intergenic | 30.0% |
| AATTAAATTGGTGCGTGAAT+AGG | + | chr4_3:36148743-36148762 | None:intergenic | 30.0% | |
| !! | TTTAGCTCTTCCTTAGAATA+CGG | + | chr4_3:36148777-36148796 | None:intergenic | 30.0% |
| ! | AAGTCGAATGAAAATTTTGG+AGG | - | chr4_3:36149028-36149047 | Msa0639620:CDS | 30.0% |
| ! | AGTCGAATGAAAATTTTGGA+GGG | - | chr4_3:36149029-36149048 | Msa0639620:CDS | 30.0% |
| ATCCACAAAAAGGTAAAAAC+TGG | - | chr4_3:36149517-36149536 | Msa0639620:intron | 30.0% | |
| TCCACAAAAAGGTAAAAACT+GGG | - | chr4_3:36149518-36149537 | Msa0639620:intron | 30.0% | |
| ! | AACTGTGATTAATAATGGGA+TGG | + | chr4_3:36149589-36149608 | None:intergenic | 30.0% |
| TGCTTGGACAAATTGAAATA+TGG | - | chr4_3:36149650-36149669 | Msa0639620:intron | 30.0% | |
| ! | ACAATTTGAGTTAAGGATAG+CGG | + | chr4_3:36149763-36149782 | None:intergenic | 30.0% |
| ! | ATTCTGCACAATTTGAGTTA+AGG | + | chr4_3:36149770-36149789 | None:intergenic | 30.0% |
| CATTACTCTTAAAAGTAGAG+TGG | + | chr4_3:36149818-36149837 | None:intergenic | 30.0% | |
| TAAAAGGGTTCATATGAGTT+GGG | + | chr4_3:36149981-36150000 | None:intergenic | 30.0% | |
| TTAAAAGGGTTCATATGAGT+TGG | + | chr4_3:36149982-36150001 | None:intergenic | 30.0% | |
| ! | GTAAAAGAAGGCACAAAAAA+TGG | - | chr4_3:36150018-36150037 | Msa0639620:intron | 30.0% |
| TGGTTATGACCAATTTGAAA+TGG | - | chr4_3:36150062-36150081 | Msa0639620:intron | 30.0% | |
| CATCAACCAATGTTTGAATT+TGG | + | chr4_3:36150191-36150210 | None:intergenic | 30.0% | |
| ! | ATTCAAACATTGGTTGATGT+TGG | - | chr4_3:36150192-36150211 | Msa0639620:intron | 30.0% |
| AATTAATACCTTGGATGTGA+GGG | + | chr4_3:36150260-36150279 | None:intergenic | 30.0% | |
| AAATTAATACCTTGGATGTG+AGG | + | chr4_3:36150261-36150280 | None:intergenic | 30.0% | |
| ATGATCGTATATACTAACCA+AGG | - | chr4_3:36150412-36150431 | Msa0639620:intron | 30.0% | |
| TAACCAAGGTTATCAAAATC+AGG | - | chr4_3:36150426-36150445 | Msa0639620:intron | 30.0% | |
| AAAATCGCATTCAAAATCGA+AGG | - | chr4_3:36150455-36150474 | Msa0639620:intron | 30.0% | |
| ! | AAATCGAAGGATTTTACTCA+AGG | - | chr4_3:36150468-36150487 | Msa0639620:intron | 30.0% |
| AAAATCGCAATCAAAATCGA+TGG | - | chr4_3:36150520-36150539 | Msa0639620:intron | 30.0% | |
| !!! | TCTATTTTGGGATTCTACTA+TGG | - | chr4_3:36150651-36150670 | Msa0639620:intron | 30.0% |
| CGACTTAAATCCTAAAATTC+AGG | + | chr4_3:36150712-36150731 | None:intergenic | 30.0% | |
| ! | TGTTATAGATAGTTTGAGAC+AGG | - | chr4_3:36150791-36150810 | Msa0639620:intron | 30.0% |
| ! | GTTATAGATAGTTTGAGACA+GGG | - | chr4_3:36150792-36150811 | Msa0639620:intron | 30.0% |
| ! | TTATAGATAGTTTGAGACAG+GGG | - | chr4_3:36150793-36150812 | Msa0639620:intron | 30.0% |
| AAATATCCAAAAGTTTGTGG+AGG | + | chr4_3:36150851-36150870 | None:intergenic | 30.0% | |
| !! | AAGTGACACTCATTTTGAAA+CGG | + | chr4_3:36151099-36151118 | None:intergenic | 30.0% |
| !!! | AGTGACATTCATTTTGAAAC+TGG | + | chr4_3:36151125-36151144 | None:intergenic | 30.0% |
| ! | TGTGTAGAGTATTAATTGGA+TGG | + | chr4_3:36151190-36151209 | None:intergenic | 30.0% |
| ! | GTAGTGTGTAGAGTATTAAT+TGG | + | chr4_3:36151194-36151213 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | + | chr4_3:36151322-36151341 | None:intergenic | 30.0% |
| AACAGGAAAGGTGATAATAT+TGG | - | chr4_3:36151889-36151908 | Msa0639620:intron | 30.0% | |
| AGATACTTATTCAAAGAGAC+AGG | - | chr4_3:36152025-36152044 | Msa0639620:intron | 30.0% | |
| !!! | TTTTGATGATGTTGTAACGA+GGG | + | chr4_3:36152054-36152073 | None:intergenic | 30.0% |
| !!! | ATTTTGATGATGTTGTAACG+AGG | + | chr4_3:36152055-36152074 | None:intergenic | 30.0% |
| CGCAATTTAGCACAATACTA+AGG | + | chr4_3:36146975-36146994 | None:intergenic | 35.0% | |
| TAAATTGCGCTTATGAGAAG+TGG | - | chr4_3:36146986-36147005 | Msa0639620:CDS | 35.0% | |
| AAGTGGTTAAATACACCCTA+AGG | - | chr4_3:36147066-36147085 | Msa0639620:CDS | 35.0% | |
| TTTAGCAAAGCTACACCTTA+GGG | + | chr4_3:36147084-36147103 | None:intergenic | 35.0% | |
| ! | TTTTAGCAAAGCTACACCTT+AGG | + | chr4_3:36147085-36147104 | None:intergenic | 35.0% |
| ACTCCCACATAAAAACTAGT+GGG | - | chr4_3:36147106-36147125 | Msa0639620:intron | 35.0% | |
| !!! | ACACCCACTAGTTTTTATGT+GGG | + | chr4_3:36147112-36147131 | None:intergenic | 35.0% |
| TGCAAAAGTTCTTCTATGGA+AGG | - | chr4_3:36147281-36147300 | Msa0639620:intron | 35.0% | |
| GCAAAAGTTCTTCTATGGAA+GGG | - | chr4_3:36147282-36147301 | Msa0639620:intron | 35.0% | |
| ! | CTTTCTCTCACTTTGTTTCA+AGG | + | chr4_3:36147388-36147407 | None:intergenic | 35.0% |
| CAAAGTGAGAGAAAGAGAAA+AGG | - | chr4_3:36147393-36147412 | Msa0639620:intron | 35.0% | |
| ! | GTCTAAAGCAAGAGCTTTAT+TGG | - | chr4_3:36147798-36147817 | Msa0639620:intron | 35.0% |
| TCTTCCTTAGATTGATTACG+TGG | + | chr4_3:36148140-36148159 | None:intergenic | 35.0% | |
| TAAGTGGAGCCATTTATGAT+GGG | + | chr4_3:36148243-36148262 | None:intergenic | 35.0% | |
| ATAAGTGGAGCCATTTATGA+TGG | + | chr4_3:36148244-36148263 | None:intergenic | 35.0% | |
| ! | TCCACTTATGTGGTTTGTAT+TGG | - | chr4_3:36148255-36148274 | Msa0639620:intron | 35.0% |
| ! | CCACTTATGTGGTTTGTATT+GGG | - | chr4_3:36148256-36148275 | Msa0639620:intron | 35.0% |
| GATGAGAGTTTATAAAGAGG+AGG | - | chr4_3:36148316-36148335 | Msa0639620:intron | 35.0% | |
| TGATACCATCTTAGAAATCG+TGG | + | chr4_3:36148389-36148408 | None:intergenic | 35.0% | |
| ! | CGATTTTGTAAGGAAGAGTT+AGG | - | chr4_3:36148671-36148690 | Msa0639620:CDS | 35.0% |
| GTATACTCCACAACATTATG+AGG | - | chr4_3:36149130-36149149 | Msa0639620:CDS | 35.0% | |
| AGTTGTTCCTCATAATGTTG+TGG | + | chr4_3:36149140-36149159 | None:intergenic | 35.0% | |
| ATTTGGTCCCTCTACTTTAA+AGG | + | chr4_3:36149499-36149518 | None:intergenic | 35.0% | |
| ! | TCCCAGTTTTTACCTTTTTG+TGG | + | chr4_3:36149522-36149541 | None:intergenic | 35.0% |
| !!! | TTTTGCTCTAAAAGCAGTTG+TGG | - | chr4_3:36149699-36149718 | Msa0639620:intron | 35.0% |
| CTTAAAAGTAGAGTGGAATC+AGG | + | chr4_3:36149811-36149830 | None:intergenic | 35.0% | |
| AGTGCAGAAAAATCAGAAAC+CGG | - | chr4_3:36149865-36149884 | Msa0639620:intron | 35.0% | |
| ACAAGACACAAAAGTGACAT+TGG | - | chr4_3:36149930-36149949 | Msa0639620:intron | 35.0% | |
| AAAATGGCACTGCTTTCTTT+AGG | - | chr4_3:36150034-36150053 | Msa0639620:intron | 35.0% | |
| CAACACTAGCCATTTCAAAT+TGG | + | chr4_3:36150074-36150093 | None:intergenic | 35.0% | |
| GTTATTGCTGGATACAAAGA+TGG | - | chr4_3:36150159-36150178 | Msa0639620:intron | 35.0% | |
| ATGTAAATAGCATCAGCACT+AGG | + | chr4_3:36150363-36150382 | None:intergenic | 35.0% | |
| ! | TGCTGATGCTATTTACATCA+AGG | - | chr4_3:36150365-36150384 | Msa0639620:intron | 35.0% |
| !! | AGTCCTGATTTTGATAACCT+TGG | + | chr4_3:36150432-36150451 | None:intergenic | 35.0% |
| CTATGGATTTAAGTCGTTGA+TGG | - | chr4_3:36150668-36150687 | Msa0639620:intron | 35.0% | |
| ! | GTCGCAAAATCCTGAATTTT+AGG | - | chr4_3:36150699-36150718 | Msa0639620:intron | 35.0% |
| TGTTTACTCATATAGGAGCT+TGG | + | chr4_3:36151353-36151372 | None:intergenic | 35.0% | |
| GAGCTTGTGTTTACTCATAT+AGG | + | chr4_3:36151360-36151379 | None:intergenic | 35.0% | |
| !! | AGCCAGAAATTTTGAGAAGT+GGG | + | chr4_3:36151666-36151685 | None:intergenic | 35.0% |
| !! | TAGCCAGAAATTTTGAGAAG+TGG | + | chr4_3:36151667-36151686 | None:intergenic | 35.0% |
| ! | ATTTTTGTGTGAATGGGTAG+TGG | - | chr4_3:36151795-36151814 | Msa0639620:intron | 35.0% |
| GATATTGAAGAACTGTAGGA+AGG | - | chr4_3:36151853-36151872 | Msa0639620:intron | 35.0% | |
| AATACCAGAGAAAACAGGAA+AGG | - | chr4_3:36151877-36151896 | Msa0639620:intron | 35.0% | |
| GATGAACCATTTACTGACAT+TGG | - | chr4_3:36151935-36151954 | Msa0639620:intron | 35.0% | |
| ATATTGTTTGCACACAACTC+TGG | - | chr4_3:36151974-36151993 | Msa0639620:intron | 35.0% | |
| GATTGGAAATGCTTCAATGA+TGG | + | chr4_3:36152092-36152111 | None:intergenic | 35.0% | |
| CACTCCCACATAAAAACTAG+TGG | - | chr4_3:36147105-36147124 | Msa0639620:intron | 40.0% | |
| !!! | CACACCCACTAGTTTTTATG+TGG | + | chr4_3:36147113-36147132 | None:intergenic | 40.0% |
| CAACAATCTTGTAATGTGCG+CGG | + | chr4_3:36147717-36147736 | None:intergenic | 40.0% | |
| !! | CAAGAGCTTTATTGGCCTAA+TGG | - | chr4_3:36147806-36147825 | Msa0639620:intron | 40.0% |
| CATAAATGGCTCCACTTATG+TGG | - | chr4_3:36148245-36148264 | Msa0639620:intron | 40.0% | |
| CCCAATACAAACCACATAAG+TGG | + | chr4_3:36148259-36148278 | None:intergenic | 40.0% | |
| CCATCTTAGAAATCGTGGTT+GGG | + | chr4_3:36148384-36148403 | None:intergenic | 40.0% | |
| ACCATCTTAGAAATCGTGGT+TGG | + | chr4_3:36148385-36148404 | None:intergenic | 40.0% | |
| ATCAGAGCTTGTCGAATTCA+AGG | - | chr4_3:36148710-36148729 | Msa0639620:CDS | 40.0% | |
| TCAGAGCTTGTCGAATTCAA+GGG | - | chr4_3:36148711-36148730 | Msa0639620:CDS | 40.0% | |
| AAATTGGTGCGTGAATAGGT+AGG | + | chr4_3:36148739-36148758 | None:intergenic | 40.0% | |
| TGAGGAACAACTCACAACAA+TGG | - | chr4_3:36149148-36149167 | Msa0639620:CDS | 40.0% | |
| GAGGAACAACTCACAACAAT+GGG | - | chr4_3:36149149-36149168 | Msa0639620:CDS | 40.0% | |
| CACACATGCCATTGTATAGA+GGG | + | chr4_3:36149268-36149287 | None:intergenic | 40.0% | |
| AAAAGTGACATTGGCACCAT+TGG | - | chr4_3:36149939-36149958 | Msa0639620:intron | 40.0% | |
| TGAGTCTCTAGTAACACCAA+TGG | + | chr4_3:36149958-36149977 | None:intergenic | 40.0% | |
| ACTGCTTTCTTTAGGTGTCA+TGG | - | chr4_3:36150042-36150061 | Msa0639620:intron | 40.0% | |
| ! | GTGTTTAGAGCTGTTATTGC+TGG | - | chr4_3:36150147-36150166 | Msa0639620:intron | 40.0% |
| ! | CAAACATTGGTTGATGTTGG+TGG | - | chr4_3:36150195-36150214 | Msa0639620:intron | 40.0% |
| TGTTAGTGTGTAACGTGTGT+GGG | + | chr4_3:36150949-36150968 | None:intergenic | 40.0% | |
| ATGTTAGTGTGTAACGTGTG+TGG | + | chr4_3:36150950-36150969 | None:intergenic | 40.0% | |
| !! | TTTGAAACGGAGGGAGTATT+AGG | + | chr4_3:36151086-36151105 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr4_3:36151095-36151114 | None:intergenic | 40.0% |
| !!! | TGACACTCATTTTGAAACGG+AGG | + | chr4_3:36151096-36151115 | None:intergenic | 40.0% |
| TTGAGGAACACTGCTCATAT+GGG | + | chr4_3:36151417-36151436 | None:intergenic | 40.0% | |
| ATTGAGGAACACTGCTCATA+TGG | + | chr4_3:36151418-36151437 | None:intergenic | 40.0% | |
| !! | CCAGAAATTTTGAGAAGTGG+GGG | + | chr4_3:36151664-36151683 | None:intergenic | 40.0% |
| !! | GCCAGAAATTTTGAGAAGTG+GGG | + | chr4_3:36151665-36151684 | None:intergenic | 40.0% |
| TCTAACACATCTCAAACCAG+TGG | + | chr4_3:36151692-36151711 | None:intergenic | 40.0% | |
| AAGGCAATACCAGAGAAAAC+AGG | - | chr4_3:36151872-36151891 | Msa0639620:intron | 40.0% | |
| ! | ATCACCTTTCCTGTTTTCTC+TGG | + | chr4_3:36151884-36151903 | None:intergenic | 40.0% |
| GATCATGTATTGGATCCAGA+AGG | - | chr4_3:36151911-36151930 | Msa0639620:intron | 40.0% | |
| GTAAATGGTTCATCTCCTTC+TGG | + | chr4_3:36151929-36151948 | None:intergenic | 40.0% | |
| GCTATGCCAATGTCAGTAAA+TGG | + | chr4_3:36151944-36151963 | None:intergenic | 40.0% | |
| TCAACATCCACGCACCTTAA+AGG | + | chr4_3:36146845-36146864 | None:intergenic | 45.0% | |
| GTGTGTGTGTGTGTGTGTAT+GGG | + | chr4_3:36147147-36147166 | None:intergenic | 45.0% | |
| TGTGTGTGTGTGTGTGTGTA+TGG | + | chr4_3:36147148-36147167 | None:intergenic | 45.0% | |
| GAGTGTCTCAAGCAACCATT+AGG | + | chr4_3:36147824-36147843 | None:intergenic | 45.0% | |
| TGCGCCACGTAATCAATCTA+AGG | - | chr4_3:36148133-36148152 | Msa0639620:intron | 45.0% | |
| GAAAAACCCAAGTCCCACAT+CGG | - | chr4_3:36148278-36148297 | Msa0639620:intron | 45.0% | |
| CTAACACAACCCCACAAAAC+CGG | + | chr4_3:36148360-36148379 | None:intergenic | 45.0% | |
| ! | CCCAACCACGATTTCTAAGA+TGG | - | chr4_3:36148381-36148400 | Msa0639620:intron | 45.0% |
| TGCTATCAGGTTTCCGCTAT+CGG | - | chr4_3:36148437-36148456 | Msa0639620:intron | 45.0% | |
| GGTTCGTGGACATAAATGGT+GGG | + | chr4_3:36148467-36148486 | None:intergenic | 45.0% | |
| TGGTTCGTGGACATAAATGG+TGG | + | chr4_3:36148468-36148487 | None:intergenic | 45.0% | |
| ! | GCTTGGTTCGTGGACATAAA+TGG | + | chr4_3:36148471-36148490 | None:intergenic | 45.0% |
| GTGTGTTAAGAGTCCCACAT+CGG | - | chr4_3:36148514-36148533 | Msa0639620:intron | 45.0% | |
| TTAAGAGTCCCACATCGGAT+AGG | - | chr4_3:36148519-36148538 | Msa0639620:intron | 45.0% | |
| GTGTGTTAAGAGTCCCACAT+CGG | - | chr4_3:36148514-36148533 | Msa0639620:intron | 45.0% | |
| TTAAGAGTCCCACATCGGAT+AGG | - | chr4_3:36148519-36148538 | Msa0639620:intron | 45.0% | |
| !! | CCTTACAAAATCGGCTTGTG+AGG | + | chr4_3:36148664-36148683 | None:intergenic | 45.0% |
| !! | CCTCACAAGCCGATTTTGTA+AGG | - | chr4_3:36148661-36148680 | Msa0639620:CDS | 45.0% |
| GCACACATGCCATTGTATAG+AGG | + | chr4_3:36149269-36149288 | None:intergenic | 45.0% | |
| GAGGGACCAAATCCACAAAA+AGG | - | chr4_3:36149507-36149526 | Msa0639620:intron | 45.0% | |
| AAATGACTAGGGTGTGAGCA+AGG | - | chr4_3:36149612-36149631 | Msa0639620:intron | 45.0% | |
| GAAGAGGAGGAATCATTGCT+TGG | - | chr4_3:36149634-36149653 | Msa0639620:intron | 45.0% | |
| ! | AGGATAGCGGTTTACACTGA+CGG | + | chr4_3:36149750-36149769 | None:intergenic | 45.0% |
| AGTAGAGTGGAATCAGGAGA+GGG | + | chr4_3:36149805-36149824 | None:intergenic | 45.0% | |
| AAGTAGAGTGGAATCAGGAG+AGG | + | chr4_3:36149806-36149825 | None:intergenic | 45.0% | |
| GAAACCGGCGAAATTCTCTA+CGG | - | chr4_3:36149880-36149899 | Msa0639620:intron | 45.0% | |
| GCTTGACACGTGCATCAAAA+TGG | - | chr4_3:36149902-36149921 | Msa0639620:intron | 45.0% | |
| AAAGGACAAGCATGCACAAC+TGG | - | chr4_3:36150120-36150139 | Msa0639620:intron | 45.0% | |
| ! | ACATTGGTTGATGTTGGTGG+TGG | - | chr4_3:36150198-36150217 | Msa0639620:intron | 45.0% |
| !! | GTTGATGTTGGTGGTGGTAT+TGG | - | chr4_3:36150204-36150223 | Msa0639620:intron | 45.0% |
| AAAGCTTACCCTCACATCCA+AGG | - | chr4_3:36150249-36150268 | Msa0639620:intron | 45.0% | |
| TGGGTGATGCCATCATACTT+GGG | + | chr4_3:36150312-36150331 | None:intergenic | 45.0% | |
| ATGGGTGATGCCATCATACT+TGG | + | chr4_3:36150313-36150332 | None:intergenic | 45.0% | |
| TATGATGGCATCACCCATGT+TGG | - | chr4_3:36150315-36150334 | Msa0639620:intron | 45.0% | |
| GAACATGTCTCCTCCAACAT+GGG | + | chr4_3:36150331-36150350 | None:intergenic | 45.0% | |
| ! | TAGATAGTTTGAGACAGGGG+CGG | - | chr4_3:36150796-36150815 | Msa0639620:intron | 45.0% |
| AGCCATATAGGAGCTTGTGT+GGG | - | chr4_3:36150819-36150838 | Msa0639620:intron | 45.0% | |
| ATCCAAAAGTTTGTGGAGGC+AGG | + | chr4_3:36150847-36150866 | None:intergenic | 45.0% | |
| GTTAGTGTGTAACGTGTGTG+GGG | + | chr4_3:36150948-36150967 | None:intergenic | 45.0% | |
| ACACTGCTCATATGGGAGTT+AGG | + | chr4_3:36151410-36151429 | None:intergenic | 45.0% | |
| CCCCCACTTCTCAAAATTTC+TGG | - | chr4_3:36151661-36151680 | Msa0639620:intron | 45.0% | |
| !! | AAAATTTCTGGCTACGCCAC+TGG | - | chr4_3:36151673-36151692 | Msa0639620:intron | 45.0% |
| !! | GGTAGTGGATTCTTCATGAC+TGG | - | chr4_3:36151810-36151829 | Msa0639620:intron | 45.0% |
| TTGTTTGCACACAACTCTGG+TGG | - | chr4_3:36151977-36151996 | Msa0639620:intron | 45.0% | |
| ACAACTCTGGTGGTAAGGAA+AGG | - | chr4_3:36151987-36152006 | Msa0639620:intron | 45.0% | |
| AGGAAAGGACTGAAGAGAAC+TGG | - | chr4_3:36152002-36152021 | Msa0639620:intron | 45.0% | |
| !!! | TAAAATTAATATTTTTTTGA+TGG | - | chr4_3:36147496-36147515 | Msa0639620:intron | 5.0% |
| !! | TCAAAATTAAATAATAAAAA+AGG | - | chr4_3:36148020-36148039 | Msa0639620:intron | 5.0% |
| !!! | TATAAATTTTATATTTTTTG+CGG | - | chr4_3:36148834-36148853 | Msa0639620:CDS | 5.0% |
| !!! | TTAAAAAATTCTAATTTTTT+GGG | - | chr4_3:36148886-36148905 | Msa0639620:CDS | 5.0% |
| !!! | ATATTTAGTAATATTTTTTT+GGG | + | chr4_3:36150552-36150571 | None:intergenic | 5.0% |
| !!! | TATATTTAGTAATATTTTTT+TGG | + | chr4_3:36150553-36150572 | None:intergenic | 5.0% |
| CTCTCCACCTTCTGCCTTTA+AGG | - | chr4_3:36146828-36146847 | Msa0639620:CDS | 50.0% | |
| GTCTATCCGATGTGGGACTT+GGG | + | chr4_3:36148287-36148306 | None:intergenic | 50.0% | |
| CAAGTCCCACATCGGATAGA+CGG | - | chr4_3:36148286-36148305 | Msa0639620:intron | 50.0% | |
| AAGTCCCACATCGGATAGAC+GGG | - | chr4_3:36148287-36148306 | Msa0639620:intron | 50.0% | |
| !! | ACCTCACAAGCCGGTTTTGT+GGG | - | chr4_3:36148347-36148366 | Msa0639620:intron | 50.0% |
| !! | GATAGCGGAAACCTGATAGC+AGG | + | chr4_3:36148438-36148457 | None:intergenic | 50.0% |
| GCTATCAGGTTTCCGCTATC+GGG | - | chr4_3:36148438-36148457 | Msa0639620:intron | 50.0% | |
| ! | TCGTGGACATAAATGGTGGG+TGG | + | chr4_3:36148464-36148483 | None:intergenic | 50.0% |
| !! | CAAAATCGGCTTGTGAGGTG+AGG | + | chr4_3:36148659-36148678 | None:intergenic | 50.0% |
| CAAGCCGTAGAGAATTTCGC+CGG | + | chr4_3:36149887-36149906 | None:intergenic | 50.0% | |
| !! | GATGTTGGTGGTGGTATTGG+CGG | - | chr4_3:36150207-36150226 | Msa0639620:intron | 50.0% |
| CGAACATGTCTCCTCCAACA+TGG | + | chr4_3:36150332-36150351 | None:intergenic | 50.0% | |
| GAGCCATATAGGAGCTTGTG+TGG | - | chr4_3:36150818-36150837 | Msa0639620:intron | 50.0% | |
| AGCCCACACAAGCTCCTATA+TGG | + | chr4_3:36150824-36150843 | None:intergenic | 50.0% | |
| ! | CTCCTGCCTCCACAAACTTT+TGG | - | chr4_3:36150842-36150861 | Msa0639620:intron | 50.0% |
| TGCACACAACTCTGGTGGTA+AGG | - | chr4_3:36151982-36152001 | Msa0639620:intron | 50.0% | |
| GGCAGAAGGTGGAGAGTGAT+TGG | + | chr4_3:36146824-36146843 | None:intergenic | 55.0% | |
| CGCACCTTAAAGGCAGAAGG+TGG | + | chr4_3:36146835-36146854 | None:intergenic | 55.0% | |
| CCACGCACCTTAAAGGCAGA+AGG | + | chr4_3:36146838-36146857 | None:intergenic | 55.0% | |
| !! | CCTTCTGCCTTTAAGGTGCG+TGG | - | chr4_3:36146835-36146854 | Msa0639620:CDS | 55.0% |
| CGTCTATCCGATGTGGGACT+TGG | + | chr4_3:36148288-36148307 | None:intergenic | 55.0% | |
| GAGTCCCGTCTATCCGATGT+GGG | + | chr4_3:36148294-36148313 | None:intergenic | 55.0% | |
| AGAGTCCCGTCTATCCGATG+TGG | + | chr4_3:36148295-36148314 | None:intergenic | 55.0% | |
| !! | CAAAACCGGCTTGTGAGGTG+AGG | + | chr4_3:36148346-36148365 | None:intergenic | 55.0% |
| !! | CACCTCACAAGCCGGTTTTG+TGG | - | chr4_3:36148346-36148365 | Msa0639620:intron | 55.0% |
| !! | CCTCACAAGCCGGTTTTGTG+GGG | - | chr4_3:36148348-36148367 | Msa0639620:intron | 55.0% |
| AGAGCCTCTCCAAGATCCAC+TGG | - | chr4_3:36148408-36148427 | Msa0639620:intron | 55.0% | |
| GAGCCTCTCCAAGATCCACT+GGG | - | chr4_3:36148409-36148428 | Msa0639620:intron | 55.0% | |
| AGCGGAAACCTGATAGCAGG+TGG | + | chr4_3:36148435-36148454 | None:intergenic | 55.0% | |
| ! | GCACTATTGGGCTTGGTTCG+TGG | + | chr4_3:36148481-36148500 | None:intergenic | 55.0% |
| CGAACCAAGCCCAATAGTGC+TGG | - | chr4_3:36148481-36148500 | Msa0639620:intron | 55.0% | |
| ACGACCAGCACTATTGGGCT+TGG | + | chr4_3:36148488-36148507 | None:intergenic | 55.0% | |
| CCCTCACGACCAGCACTATT+GGG | + | chr4_3:36148493-36148512 | None:intergenic | 55.0% | |
| !! | CCCAATAGTGCTGGTCGTGA+GGG | - | chr4_3:36148490-36148509 | Msa0639620:intron | 55.0% |
| !! | CCAATAGTGCTGGTCGTGAG+GGG | - | chr4_3:36148491-36148510 | Msa0639620:intron | 55.0% |
| !! | CAATAGTGCTGGTCGTGAGG+GGG | - | chr4_3:36148492-36148511 | Msa0639620:intron | 55.0% |
| GTCCCACATCGGATAGGTGA+TGG | - | chr4_3:36148525-36148544 | Msa0639620:intron | 55.0% | |
| GGCCATCACCTATCCGATGT+GGG | + | chr4_3:36148530-36148549 | None:intergenic | 55.0% | |
| AGGCCATCACCTATCCGATG+TGG | + | chr4_3:36148531-36148550 | None:intergenic | 55.0% | |
| ! | GCACTATTGGGCTTGGTTCG+TGG | + | chr4_3:36148481-36148500 | None:intergenic | 55.0% |
| CGAACCAAGCCCAATAGTGC+TGG | - | chr4_3:36148481-36148500 | Msa0639620:intron | 55.0% | |
| ACGACCAGCACTATTGGGCT+TGG | + | chr4_3:36148488-36148507 | None:intergenic | 55.0% | |
| CCCTCACGACCAGCACTATT+GGG | + | chr4_3:36148493-36148512 | None:intergenic | 55.0% | |
| !! | CCCAATAGTGCTGGTCGTGA+GGG | - | chr4_3:36148490-36148509 | Msa0639620:intron | 55.0% |
| !! | CCAATAGTGCTGGTCGTGAG+GGG | - | chr4_3:36148491-36148510 | Msa0639620:intron | 55.0% |
| !! | CAATAGTGCTGGTCGTGAGG+GGG | - | chr4_3:36148492-36148511 | Msa0639620:intron | 55.0% |
| GTCCCACATCGGATAGGTGA+TGG | - | chr4_3:36148525-36148544 | Msa0639620:intron | 55.0% | |
| GGCCATCACCTATCCGATGT+GGG | + | chr4_3:36148530-36148549 | None:intergenic | 55.0% | |
| AGGCCATCACCTATCCGATG+TGG | + | chr4_3:36148531-36148550 | None:intergenic | 55.0% | |
| CTAGGGTGTGAGCAAGGAAG+AGG | - | chr4_3:36149618-36149637 | Msa0639620:intron | 55.0% | |
| GATGGCATCACCCATGTTGG+AGG | - | chr4_3:36150318-36150337 | Msa0639620:intron | 55.0% | |
| GCACTCCTCACCTCACAAGC+CGG | - | chr4_3:36148338-36148357 | Msa0639620:intron | 60.0% | |
| !! | CCCCACAAAACCGGCTTGTG+AGG | + | chr4_3:36148351-36148370 | None:intergenic | 60.0% |
| TGGCCCAGTGGATCTTGGAG+AGG | + | chr4_3:36148415-36148434 | None:intergenic | 60.0% | |
| !! | AATGGTGGGTGGCCCGATAG+CGG | + | chr4_3:36148453-36148472 | None:intergenic | 60.0% |
| !! | GCCCAATAGTGCTGGTCGTG+AGG | - | chr4_3:36148489-36148508 | Msa0639620:intron | 60.0% |
| CCCCTCACGACCAGCACTAT+TGG | + | chr4_3:36148494-36148513 | None:intergenic | 60.0% | |
| ! | GGGCTTGGTTCGTGGACATC+AGG | + | chr4_3:36148551-36148570 | None:intergenic | 60.0% |
| !! | GCCCAATAGTGCTGGTCGTG+AGG | - | chr4_3:36148489-36148508 | Msa0639620:intron | 60.0% |
| CCCCTCACGACCAGCACTAT+TGG | + | chr4_3:36148494-36148513 | None:intergenic | 60.0% | |
| GGGTGTGAGCAAGGAAGAGG+AGG | - | chr4_3:36149621-36149640 | Msa0639620:intron | 60.0% | |
| AGACAGGGGCGGAGCCATAT+AGG | - | chr4_3:36150807-36150826 | Msa0639620:intron | 60.0% | |
| GCAGGTGGCCCAGTGGATCT+TGG | + | chr4_3:36148420-36148439 | None:intergenic | 65.0% | |
| CCTGATAGCAGGTGGCCCAG+TGG | + | chr4_3:36148427-36148446 | None:intergenic | 65.0% | |
| CCACTGGGCCACCTGCTATC+AGG | - | chr4_3:36148424-36148443 | Msa0639620:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 36146805 | 36152114 | 36146805 | ID=Msa0639620;Name=Msa0639620 |
| chr4_3 | mRNA | 36146805 | 36152114 | 36146805 | ID=Msa0639620-mRNA-1;Parent=Msa0639620;Name=Msa0639620-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|0.66|1|1|3|0|369 |
| chr4_3 | exon | 36152070 | 36152114 | 36152070 | ID=Msa0639620-mRNA-1:exon:8377;Parent=Msa0639620-mRNA-1 |
| chr4_3 | exon | 36148533 | 36149297 | 36148533 | ID=Msa0639620-mRNA-1:exon:8376;Parent=Msa0639620-mRNA-1 |
| chr4_3 | exon | 36146805 | 36147104 | 36146805 | ID=Msa0639620-mRNA-1:exon:8375;Parent=Msa0639620-mRNA-1 |
| chr4_3 | CDS | 36152070 | 36152114 | 36152070 | ID=Msa0639620-mRNA-1:cds;Parent=Msa0639620-mRNA-1 |
| chr4_3 | CDS | 36148533 | 36149297 | 36148533 | ID=Msa0639620-mRNA-1:cds;Parent=Msa0639620-mRNA-1 |
| chr4_3 | CDS | 36146805 | 36147104 | 36146805 | ID=Msa0639620-mRNA-1:cds;Parent=Msa0639620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
