Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0645730 | KEH30345.1 | 95.806 | 310 | 13 | 0 | 1 | 310 | 1 | 310 | 0.0 | 637 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0645730 | sp|Q9LND7|SKI16_ARATH | 53.016 | 315 | 139 | 3 | 1 | 314 | 1 | 307 | 4.89e-113 | 351 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0645730 | A0A072UWX9 | 95.806 | 310 | 13 | 0 | 1 | 310 | 1 | 310 | 0.0 | 637 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0052300 | Msa0645730 | 0.807459 | 5.002387e-50 | -8.615850e-47 |
Msa0645730 | Msa0791010 | 0.800770 | 1.233025e-48 | -8.615850e-47 |
Msa0645730 | Msa1456050 | -0.810608 | 1.059249e-50 | -8.615850e-47 |
Msa0146070 | Msa0645730 | 0.811739 | 6.022063e-51 | -8.615850e-47 |
Msa0549430 | Msa0645730 | 0.880910 | 3.719710e-70 | -8.615850e-47 |
Msa0583770 | Msa0645730 | 0.817259 | 3.617982e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0645730 | MtrunA17_Chr4g0033681 | 94.006 | 317 | 19 | 0 | 1 | 317 | 1 | 317 | 0.0 | 636 |
Msa0645730 | MtrunA17_Chr5g0416121 | 92.771 | 166 | 11 | 1 | 531 | 695 | 45 | 210 | 5.23e-78 | 257 |
Msa0645730 | MtrunA17_Chr8g0343811 | 57.627 | 118 | 26 | 2 | 384 | 477 | 201 | 318 | 4.70e-22 | 101 |
Msa0645730 | MtrunA17_Chr8g0343811 | 60.748 | 107 | 33 | 2 | 390 | 487 | 79 | 185 | 4.28e-20 | 95.1 |
Msa0645730 | MtrunA17_Chr8g0343821 | 45.517 | 145 | 58 | 5 | 375 | 506 | 115 | 251 | 1.35e-16 | 83.6 |
Msa0645730 | MtrunA17_Chr5g0437771 | 82.927 | 41 | 7 | 0 | 492 | 532 | 221 | 261 | 1.84e-15 | 77.4 |
Msa0645730 | MtrunA17_Chr4g0057571 | 41.667 | 72 | 42 | 0 | 533 | 604 | 54 | 125 | 3.14e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0645730 | AT1G06110.3 | 53.548 | 310 | 135 | 3 | 1 | 309 | 1 | 302 | 6.33e-116 | 351 |
Msa0645730 | AT1G06110.2 | 53.016 | 315 | 139 | 3 | 1 | 314 | 1 | 307 | 4.03e-115 | 351 |
Msa0645730 | AT1G06110.1 | 53.016 | 315 | 139 | 3 | 1 | 314 | 1 | 307 | 4.97e-114 | 351 |
Msa0645730 | AT1G69800.3 | 69.091 | 165 | 50 | 1 | 532 | 695 | 43 | 207 | 1.28e-37 | 144 |
Msa0645730 | AT1G69800.1 | 69.091 | 165 | 50 | 1 | 532 | 695 | 43 | 207 | 6.08e-37 | 144 |
Msa0645730 | AT1G69800.2 | 69.091 | 165 | 50 | 1 | 532 | 695 | 72 | 236 | 6.92e-37 | 145 |
Msa0645730 | AT3G56130.3 | 64.583 | 48 | 17 | 0 | 485 | 532 | 127 | 174 | 5.32e-11 | 62.8 |
Msa0645730 | AT3G56130.2 | 71.429 | 42 | 12 | 0 | 491 | 532 | 144 | 185 | 5.82e-11 | 63.2 |
Find 198 sgRNAs with CRISPR-Local
Find 460 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAGAAAGAGCGATTGAATT+TGG | 0.151279 | 4_3:-51139959 | Msa0645730:five_prime_UTR |
AGCGGTGGTGCTTCCAATTT+TGG | 0.167319 | 4_3:-51136096 | Msa0645730:CDS |
CTTAGCTTCTGGAAAGTTAT+TGG | 0.196198 | 4_3:+51138877 | None:intergenic |
GGCACTTCTTTGGGAATTAT+TGG | 0.206564 | 4_3:-51138707 | Msa0645730:CDS |
AGTGTTGAAGCTACTCTTTC+AGG | 0.214947 | 4_3:-51134885 | Msa0645730:CDS |
TCTATTGGTAAGAAGATTTC+TGG | 0.228491 | 4_3:+51138490 | None:intergenic |
AATTGCAAGGTCACCTTAAC+AGG | 0.236369 | 4_3:+51134989 | None:intergenic |
CGACACATCTGGCACTTCTT+TGG | 0.247380 | 4_3:-51138717 | Msa0645730:CDS |
AAGTTCACGGAAGCAGATTT+TGG | 0.254589 | 4_3:+51139797 | None:intergenic |
TCTTGGATTACCTGACTTAT+AGG | 0.258678 | 4_3:+51138641 | None:intergenic |
TTTAGCGATTCATGAAATTA+TGG | 0.264063 | 4_3:-51139904 | Msa0645730:CDS |
AGAAGCTGACCGTCCAAAAT+TGG | 0.270553 | 4_3:+51136083 | None:intergenic |
GTTATTGACACATGAAATTC+TGG | 0.273112 | 4_3:+51139857 | None:intergenic |
CAAAGAGTTTCCTTAGCTTC+TGG | 0.283133 | 4_3:+51138866 | None:intergenic |
GCGAAATTTGCTGAGTTTCT+TGG | 0.284995 | 4_3:+51138624 | None:intergenic |
TCCTTTACCGCTTTCATAAT+GGG | 0.291364 | 4_3:-51138769 | Msa0645730:CDS |
ATCCTTTACCGCTTTCATAA+TGG | 0.293459 | 4_3:-51138770 | Msa0645730:CDS |
TTGGAGAAAGAAGATGGATT+TGG | 0.305406 | 4_3:-51139940 | Msa0645730:exon |
GAACAAAGAGGGGATTCTTC+TGG | 0.316370 | 4_3:+51138299 | None:intergenic |
GTGGGAACTGTCGGTGCTTT+GGG | 0.318992 | 4_3:-51133530 | Msa0645730:CDS |
TGAGTATAAGAGAGACATTC+TGG | 0.323833 | 4_3:-51140017 | Msa0645730:five_prime_UTR |
TCACCTCCGATGATTCTCTT+TGG | 0.328831 | 4_3:-51139821 | Msa0645730:CDS |
ATTGGACGATTTGGCGATTC+CGG | 0.329769 | 4_3:-51137609 | Msa0645730:CDS |
TGAAATTCTGGCAATGTCTT+CGG | 0.331618 | 4_3:+51139869 | None:intergenic |
GACACATCTGGCACTTCTTT+GGG | 0.340145 | 4_3:-51138716 | Msa0645730:CDS |
GAATTTCATGTGTCAATAAC+AGG | 0.340741 | 4_3:-51139854 | Msa0645730:CDS |
GAAATTCTGGCAATGTCTTC+GGG | 0.342990 | 4_3:+51139870 | None:intergenic |
TGTGGGAACTGTCGGTGCTT+TGG | 0.357110 | 4_3:-51133531 | Msa0645730:CDS |
AATGACCCTGATGCAGGAAT+TGG | 0.360209 | 4_3:-51133680 | Msa0645730:CDS |
ATCAAAGATGGACAAGTTAT+AGG | 0.360561 | 4_3:-51135040 | Msa0645730:CDS |
TTGAATTTGGAGAAAGAAGA+TGG | 0.376998 | 4_3:-51139946 | Msa0645730:exon |
TCTCAACTGATGACGACTAA+TGG | 0.379983 | 4_3:-51135610 | Msa0645730:CDS |
GCTTTGGGAGCAATGGCATT+AGG | 0.380133 | 4_3:-51133515 | Msa0645730:CDS |
ACAGGTCCTGCTGCAATTGC+GGG | 0.382650 | 4_3:-51133488 | Msa0645730:CDS |
GAACTCGCCGGCGGTGGGAT+TGG | 0.396921 | 4_3:-51137627 | Msa0645730:CDS |
ATCTTAACAGCTTCGCCAAC+AGG | 0.398013 | 4_3:+51133737 | None:intergenic |
ACATGGCATCAAGTCTCTAT+TGG | 0.400860 | 4_3:+51138475 | None:intergenic |
GCTTACCGTTGCTGACTTGA+AGG | 0.402415 | 4_3:+51133337 | None:intergenic |
TCTGAACCAATTCCTGCATC+AGG | 0.403040 | 4_3:+51133674 | None:intergenic |
CCTGGAGTTCCTGGAGGAAA+AGG | 0.408161 | 4_3:-51133860 | Msa0645730:intron |
TCTATCTGAAAGCAACATAT+TGG | 0.412061 | 4_3:-51133714 | Msa0645730:CDS |
GATGGACAGCGAAAAGGTTC+AGG | 0.412775 | 4_3:-51138420 | Msa0645730:CDS |
TGATAAAACCACTTTGTAAA+CGG | 0.414113 | 4_3:+51138363 | None:intergenic |
GAAGAATGTTGATGAAGCTC+TGG | 0.415597 | 4_3:-51137016 | Msa0645730:CDS |
CAGCAAATTTCGCACAACTT+AGG | 0.416246 | 4_3:-51138614 | Msa0645730:CDS |
GGCGGTGGGATTGGACGATT+TGG | 0.417048 | 4_3:-51137618 | Msa0645730:CDS |
GTAAGCATCATAAGAGAAGC+AGG | 0.425314 | 4_3:-51140049 | Msa0645730:five_prime_UTR |
GGGGTTTCCGAGATGATCAA+TGG | 0.428590 | 4_3:+51139761 | None:intergenic |
ATTCACGAAATGATCATAGA+AGG | 0.432687 | 4_3:+51138676 | None:intergenic |
TTTATCAAACTGCTTGAAGA+AGG | 0.436769 | 4_3:-51138347 | Msa0645730:CDS |
CATCAGTTGAGAGGCTAGAT+TGG | 0.439532 | 4_3:+51135621 | None:intergenic |
TGCAGGAAGCTTATCAAACT+TGG | 0.443709 | 4_3:-51138979 | Msa0645730:intron |
GGGCACTTCACTCCCTGTTA+AGG | 0.447122 | 4_3:-51135002 | Msa0645730:intron |
TGGAAAGTTATTGGTGAGCC+AGG | 0.447285 | 4_3:+51138886 | None:intergenic |
AAACCCCACCCCTTCCTTCA+AGG | 0.450980 | 4_3:-51139745 | Msa0645730:intron |
ATGCAGGAATTGGTTCAGAT+TGG | 0.454460 | 4_3:-51133670 | Msa0645730:CDS |
TGAATCTGACTTTGGCGGGC+AGG | 0.454920 | 4_3:+51137048 | None:intergenic |
GAAGAAGAAGTCGCCGGTGG+TGG | 0.467426 | 4_3:-51137667 | Msa0645730:CDS |
GTAGATACTGAATCTGACTT+TGG | 0.467897 | 4_3:+51137040 | None:intergenic |
TTATTTATTACCTATAAGTC+AGG | 0.471713 | 4_3:-51138651 | Msa0645730:CDS |
AGAAGCTGAGATTCAAGAGT+TGG | 0.474189 | 4_3:-51138831 | Msa0645730:CDS |
CCGGTGGTGGGAGGGAGTAC+CGG | 0.476180 | 4_3:-51137654 | Msa0645730:CDS |
GCCCATTATGAAAGCGGTAA+AGG | 0.478015 | 4_3:+51138768 | None:intergenic |
GCAACTGCAGCTCTCACAGC+AGG | 0.480350 | 4_3:-51135572 | Msa0645730:CDS |
GATGCCAACAGTCATGCTTC+CGG | 0.480670 | 4_3:+51136035 | None:intergenic |
GATCACGATACCGACACATC+TGG | 0.487084 | 4_3:-51138728 | Msa0645730:CDS |
GGAGAAGAACTCGCCGGCGG+TGG | 0.488091 | 4_3:-51137633 | Msa0645730:CDS |
AAGCGGTAAAGGATCCTTGT+AGG | 0.488371 | 4_3:+51138779 | None:intergenic |
ATCCACTGCAATTTCGTCGC+CGG | 0.489254 | 4_3:+51137590 | None:intergenic |
CCAATGGTCAACTATACGTT+GGG | 0.491943 | 4_3:-51138514 | Msa0645730:CDS |
ACTTCTTTGGGAATTATTGG+TGG | 0.492745 | 4_3:-51138704 | Msa0645730:CDS |
TACAGGTCCTGCTGCAATTG+CGG | 0.493300 | 4_3:-51133489 | Msa0645730:CDS |
CAGCAATTAGCCGGAGGCAT+CGG | 0.495260 | 4_3:-51136129 | Msa0645730:CDS |
AGCAGCCACAAGAACATACT+TGG | 0.498864 | 4_3:+51138577 | None:intergenic |
CTCTCCTACCTGCACACCAT+TGG | 0.499292 | 4_3:+51138265 | None:intergenic |
GCAATGGCATTAGGAGCTAC+AGG | 0.503454 | 4_3:-51133506 | Msa0645730:CDS |
TGCTGTAACCAATGGTGTGC+AGG | 0.507410 | 4_3:-51138273 | Msa0645730:intron |
CTAATTAATGACCCTGATGC+AGG | 0.510167 | 4_3:-51133686 | Msa0645730:CDS |
GAAATGAAGAGTGACCTTGA+AGG | 0.511250 | 4_3:+51139731 | None:intergenic |
TTCTTCCTCAACTGTACCAA+TGG | 0.511902 | 4_3:-51138530 | Msa0645730:CDS |
CTGTTGGCATCGGTGTTAGC+TGG | 0.512181 | 4_3:-51136023 | Msa0645730:CDS |
AGCTATAATTCTGTGGGTGA+TGG | 0.512414 | 4_3:-51133615 | Msa0645730:CDS |
TAAGCGTGTCAAAAGGTGTT+GGG | 0.513341 | 4_3:-51138921 | Msa0645730:CDS |
CAGGGTGATATAATCAAAGA+TGG | 0.514842 | 4_3:-51135052 | Msa0645730:CDS |
GCTGCAGTTGCTCTATCAGC+TGG | 0.518337 | 4_3:-51133578 | Msa0645730:CDS |
CAACAAGCCAGTGGGACGAT+GGG | 0.519557 | 4_3:-51135649 | Msa0645730:CDS |
TTGGTTCAGATTGGAGAGAC+AGG | 0.519851 | 4_3:-51133661 | Msa0645730:CDS |
TCTTTCTGTTTCAGAACTGT+CGG | 0.521893 | 4_3:-51137079 | Msa0645730:CDS |
GGATTAACTGCTGCTGCAGT+AGG | 0.525333 | 4_3:-51133467 | Msa0645730:CDS |
TGACCTTGAAGGAAGGGGTG+GGG | 0.528849 | 4_3:+51139742 | None:intergenic |
CTTACCGTTGCTGACTTGAA+GGG | 0.529512 | 4_3:+51133338 | None:intergenic |
GTTAATCCCGCAATTGCAGC+AGG | 0.531116 | 4_3:+51133482 | None:intergenic |
TATAGGTTATGTGGATCAGT+GGG | 0.531216 | 4_3:-51135023 | Msa0645730:CDS |
AAGATGGATTTGGAATCAGT+TGG | 0.532078 | 4_3:-51139930 | Msa0645730:CDS |
TCATGAGATGGACAGCGAAA+AGG | 0.532916 | 4_3:-51138426 | Msa0645730:CDS |
GATTGGAGAGACAGGTACCT+TGG | 0.533459 | 4_3:-51133653 | Msa0645730:CDS |
GGATGACCCCATCGTCCCAC+TGG | 0.533726 | 4_3:+51135642 | None:intergenic |
TGGACAAGTTATAGGTTATG+TGG | 0.534522 | 4_3:-51135032 | Msa0645730:CDS |
CCAAGGTTATTTGCAGCTTG+CGG | 0.535898 | 4_3:+51133392 | None:intergenic |
TTGCGGAGCATCTTTAGCCA+TGG | 0.538639 | 4_3:+51133409 | None:intergenic |
CAATAACTTTCCAGAAGCTA+AGG | 0.538757 | 4_3:-51138876 | Msa0645730:CDS |
GTGTAGCCGGGGCAGCAAGT+TGG | 0.538761 | 4_3:-51135733 | Msa0645730:intron |
GATACTGAATCTGACTTTGG+CGG | 0.539455 | 4_3:+51137043 | None:intergenic |
GGGTTTCCGAGATGATCAAT+GGG | 0.541622 | 4_3:+51139762 | None:intergenic |
GCACCAGACAACATGGGGAA+GGG | 0.541763 | 4_3:+51135990 | None:intergenic |
GATGCGAACACCGATGCCTC+CGG | 0.541982 | 4_3:+51136119 | None:intergenic |
TCAAATTGCCTCTTCCTACA+AGG | 0.542221 | 4_3:-51138793 | Msa0645730:CDS |
GCAGTAGGTGCAGCAGTGGT+AGG | 0.543813 | 4_3:-51133452 | Msa0645730:CDS |
ACCGCCGGCGAGTTCTTCTC+CGG | 0.544090 | 4_3:+51137635 | None:intergenic |
TAAAGGATCCTTGTAGGAAG+AGG | 0.548947 | 4_3:+51138785 | None:intergenic |
TTTCTTGCCCATTATGAAAG+CGG | 0.550873 | 4_3:+51138762 | None:intergenic |
AACAGCTGCTAGAGTTGGTG+TGG | 0.551118 | 4_3:-51133549 | Msa0645730:CDS |
ATTATTCAGCTATAATTCTG+TGG | 0.551364 | 4_3:-51133622 | Msa0645730:CDS |
AGAAGTCGCCGGTGGTGGGA+GGG | 0.551823 | 4_3:-51137662 | Msa0645730:CDS |
CTGAATAATCTATGATGCCA+AGG | 0.552941 | 4_3:+51133636 | None:intergenic |
AGCTGAGATTCAAGAGTTGG+AGG | 0.553076 | 4_3:-51138828 | Msa0645730:CDS |
GTGACCTTGAAGGAAGGGGT+GGG | 0.553140 | 4_3:+51139741 | None:intergenic |
TTAAGCGTGTCAAAAGGTGT+TGG | 0.554883 | 4_3:-51138922 | Msa0645730:CDS |
TTTGGACCAAAGAGAATCAT+CGG | 0.554950 | 4_3:+51139815 | None:intergenic |
GGAAGCATGACTGTTGGCAT+CGG | 0.555220 | 4_3:-51136033 | Msa0645730:CDS |
ATACTGAATCTGACTTTGGC+GGG | 0.555474 | 4_3:+51137044 | None:intergenic |
TGCTGCAGTAGGTGCAGCAG+TGG | 0.555506 | 4_3:-51133456 | Msa0645730:CDS |
GATTAGTTTGCATCATGAGA+TGG | 0.556689 | 4_3:-51138438 | Msa0645730:CDS |
AACAAACCAACTTGCTGCCC+CGG | 0.557758 | 4_3:+51135727 | None:intergenic |
CTCTTGTTAAGCGTGTCAAA+AGG | 0.560024 | 4_3:-51138928 | Msa0645730:CDS |
GTTGAGTGAGAGAAAGTTCA+CGG | 0.563690 | 4_3:+51139784 | None:intergenic |
TTATTCAGCTATAATTCTGT+GGG | 0.566765 | 4_3:-51133621 | Msa0645730:CDS |
CCGCAAGCTGCAAATAACCT+TGG | 0.566807 | 4_3:-51133392 | Msa0645730:CDS |
TCAAACCTTGCAGTCAGATG+TGG | 0.568833 | 4_3:-51134915 | Msa0645730:intron |
GAAGAGTGACCTTGAAGGAA+GGG | 0.569439 | 4_3:+51139736 | None:intergenic |
TGTTCAATTGCTGTAACCAA+TGG | 0.569975 | 4_3:-51138281 | Msa0645730:CDS |
ACAACAAGCCAGTGGGACGA+TGG | 0.571221 | 4_3:-51135650 | Msa0645730:CDS |
TGTCGGTGCTTTGGGAGCAA+TGG | 0.574346 | 4_3:-51133522 | Msa0645730:CDS |
CATGGTCACCGTTTACAAAG+TGG | 0.576346 | 4_3:-51138371 | Msa0645730:CDS |
GGCACCAGACAACATGGGGA+AGG | 0.577491 | 4_3:+51135989 | None:intergenic |
GAGAAGAACTCGCCGGCGGT+GGG | 0.578110 | 4_3:-51137632 | Msa0645730:CDS |
AAATCGTCCAATCCCACCGC+CGG | 0.579295 | 4_3:+51137620 | None:intergenic |
TTACAGCAATTGAACAAAGA+GGG | 0.580363 | 4_3:+51138288 | None:intergenic |
GCTCATCAACAGCAATTAGC+CGG | 0.581079 | 4_3:-51136054 | Msa0645730:CDS |
CAAAGAAGTGCCAGATGTGT+CGG | 0.581288 | 4_3:+51138718 | None:intergenic |
AAGAAGAAGTCGCCGGTGGT+GGG | 0.581787 | 4_3:-51137666 | Msa0645730:CDS |
AAGATCCAAGTATGTTCTTG+TGG | 0.582780 | 4_3:-51138582 | Msa0645730:CDS |
AAGAAGTCGCCGGTGGTGGG+AGG | 0.583605 | 4_3:-51137663 | Msa0645730:CDS |
CTCTTCTAACCACAGTAGCA+TGG | 0.585678 | 4_3:+51138394 | None:intergenic |
GTTGACCATTGGTACAGTTG+AGG | 0.585919 | 4_3:+51138525 | None:intergenic |
GGCATCGGTGTTCGCATCAG+CGG | 0.586731 | 4_3:-51136114 | Msa0645730:CDS |
AAGAGTGACCTTGAAGGAAG+GGG | 0.587315 | 4_3:+51139737 | None:intergenic |
GCTCTGCAACAGCAATTAGC+CGG | 0.589266 | 4_3:-51136138 | Msa0645730:CDS |
AGAGTTGGTGTGGGAACTGT+CGG | 0.589800 | 4_3:-51133539 | Msa0645730:CDS |
ATTCTAGCAGACACGCCTGT+TGG | 0.590085 | 4_3:-51133752 | Msa0645730:CDS |
TGAAGAGTGACCTTGAAGGA+AGG | 0.590117 | 4_3:+51139735 | None:intergenic |
ACTCAACCCATTGATCATCT+CGG | 0.590506 | 4_3:-51139768 | Msa0645730:CDS |
TGAAGCTCTGGGTATGTATG+AGG | 0.592222 | 4_3:-51137004 | Msa0645730:intron |
AAGCTACTCTTTCAGGATGG+AGG | 0.592234 | 4_3:-51134878 | Msa0645730:intron |
ATCGGTGTTCGCATCAGCGG+TGG | 0.592699 | 4_3:-51136111 | Msa0645730:CDS |
AAGAATGTTGATGAAGCTCT+GGG | 0.594200 | 4_3:-51137015 | Msa0645730:CDS |
GTTACAGCAATTGAACAAAG+AGG | 0.594804 | 4_3:+51138287 | None:intergenic |
GTAGGTGCAGCAGTGGTAGG+TGG | 0.597826 | 4_3:-51133449 | Msa0645730:CDS |
CCGGTACTCCCTCCCACCAC+CGG | 0.598424 | 4_3:+51137654 | None:intergenic |
ACCAATGGTCAACTATACGT+TGG | 0.600485 | 4_3:-51138515 | Msa0645730:CDS |
CTGAACCAATTCCTGCATCA+GGG | 0.606933 | 4_3:+51133675 | None:intergenic |
TTGAAGCTACTCTTTCAGGA+TGG | 0.607934 | 4_3:-51134881 | Msa0645730:CDS |
AGTGACCTTGAAGGAAGGGG+TGG | 0.608618 | 4_3:+51139740 | None:intergenic |
TTCAGGATGCCATGCTACTG+TGG | 0.609877 | 4_3:-51138403 | Msa0645730:CDS |
ACAACAACAGCTGCTAGAGT+TGG | 0.616969 | 4_3:-51133554 | Msa0645730:CDS |
TACAGCAATTGAACAAAGAG+GGG | 0.619325 | 4_3:+51138289 | None:intergenic |
ATCAGATTCTGAGGAACACA+TGG | 0.619535 | 4_3:+51138458 | None:intergenic |
TGCAAACTAATCAGATTCTG+AGG | 0.620468 | 4_3:+51138449 | None:intergenic |
CCCAACGTATAGTTGACCAT+TGG | 0.621068 | 4_3:+51138514 | None:intergenic |
GCTAAGGAAACTCTTTGTGA+AGG | 0.621981 | 4_3:-51138860 | Msa0645730:CDS |
TTATAGGTTATGTGGATCAG+TGG | 0.629771 | 4_3:-51135024 | Msa0645730:CDS |
GAACAACTTCTCACTGTACG+TGG | 0.632489 | 4_3:+51138550 | None:intergenic |
TGTGAGAGCTGCAGTTGCTG+AGG | 0.635354 | 4_3:+51135577 | None:intergenic |
AACAAGCCAGTGGGACGATG+GGG | 0.638743 | 4_3:-51135648 | Msa0645730:CDS |
ATTAGTCGTCATCAGTTGAG+AGG | 0.639903 | 4_3:+51135612 | None:intergenic |
TAAGCATCATAAGAGAAGCA+GGG | 0.653445 | 4_3:-51140048 | Msa0645730:five_prime_UTR |
TTAGCCGGAAGCATGACTGT+TGG | 0.654091 | 4_3:-51136039 | Msa0645730:CDS |
CTGCAACAGCAATTAGCCGG+AGG | 0.658065 | 4_3:-51136135 | Msa0645730:CDS |
TTAGTTGAAGAAGAAGTCGC+CGG | 0.658261 | 4_3:-51137673 | Msa0645730:intron |
CAAGGAACACAACAAGCCAG+TGG | 0.660509 | 4_3:-51135658 | Msa0645730:CDS |
CTACTGTGGTTAGAAGAGCA+TGG | 0.661571 | 4_3:-51138389 | Msa0645730:CDS |
AGCTGCAAATAACCTTGGTG+AGG | 0.663543 | 4_3:-51133387 | Msa0645730:CDS |
AGAACCCTTCAAGTCAGCAA+CGG | 0.666172 | 4_3:-51133342 | Msa0645730:intron |
ATTGCAAGGTCACCTTAACA+GGG | 0.674218 | 4_3:+51134990 | None:intergenic |
ACAGCTGCTAGAGTTGGTGT+GGG | 0.678762 | 4_3:-51133548 | Msa0645730:CDS |
ACACGCTTAACAAGAGACCA+AGG | 0.679161 | 4_3:+51138935 | None:intergenic |
ATTCGCCAAAGAAAATTGCG+AGG | 0.679364 | 4_3:+51135699 | None:intergenic |
AAGGAACACAACAAGCCAGT+GGG | 0.681777 | 4_3:-51135657 | Msa0645730:CDS |
ACCGGAGAAGAACTCGCCGG+CGG | 0.685168 | 4_3:-51137636 | Msa0645730:CDS |
GTTGAAGAAGAAGTCGCCGG+TGG | 0.686951 | 4_3:-51137670 | Msa0645730:CDS |
TCTGCAGGACAATCACTGCA+AGG | 0.687231 | 4_3:-51135676 | Msa0645730:CDS |
AGTACCGGAGAAGAACTCGC+CGG | 0.694590 | 4_3:-51137639 | Msa0645730:CDS |
ACCTTGCAGTCAGATGTGGA+AGG | 0.695066 | 4_3:-51134911 | Msa0645730:intron |
TCGGTGTTAGCTGGACAGAG+TGG | 0.697702 | 4_3:-51136014 | Msa0645730:CDS |
TTACTTTGTAGTCCTCACCA+AGG | 0.706826 | 4_3:+51133375 | None:intergenic |
GGACCAAAGAGAATCATCGG+AGG | 0.726604 | 4_3:+51139818 | None:intergenic |
TGTTGCTGCAGATAAAACCA+TGG | 0.755367 | 4_3:-51133426 | Msa0645730:CDS |
ATAGGTTATGTGGATCAGTG+GGG | 0.809325 | 4_3:-51135022 | Msa0645730:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | CTTAATCTTTTTTATAATTA+AGG | - | chr4_3:51136316-51136335 | Msa0645730:intron | 10.0% |
!!! | AAATTTTATAAAAAAGATTG+TGG | - | chr4_3:51137758-51137777 | Msa0645730:intron | 10.0% |
!! | TTCATAAAAAAAAAATAGTA+CGG | - | chr4_3:51138199-51138218 | Msa0645730:intron | 10.0% |
!!! | AATTATGTTGTTTTATCATA+AGG | - | chr4_3:51133310-51133329 | Msa0645730:intron | 15.0% |
!! | ACTTAAAAAAAACACATTTA+AGG | + | chr4_3:51133727-51133746 | None:intergenic | 15.0% |
!! | TTCAAAAAGAAAAATTACAA+TGG | + | chr4_3:51134926-51134945 | None:intergenic | 15.0% |
!!! | TAATTTTTCTTTTTGAAAAC+AGG | - | chr4_3:51134929-51134948 | Msa0645730:intron | 15.0% |
!!! | AATTTTTCTTTTTGAAAACA+GGG | - | chr4_3:51134930-51134949 | Msa0645730:intron | 15.0% |
!! | TTCAAAAAGAAAAATTACAA+TGG | + | chr4_3:51134926-51134945 | None:intergenic | 15.0% |
!!! | TAATTTTTCTTTTTGAAAAC+AGG | - | chr4_3:51134929-51134948 | Msa0645730:intron | 15.0% |
!!! | AATTTTTCTTTTTGAAAACA+GGG | - | chr4_3:51134930-51134949 | Msa0645730:intron | 15.0% |
!!! | CATTTTTTTTCTTTTATTCT+GGG | - | chr4_3:51135598-51135617 | Msa0645730:CDS | 15.0% |
!!! | ATTTTTTTTCTTTTATTCTG+GGG | - | chr4_3:51135599-51135618 | Msa0645730:CDS | 15.0% |
!! | TGAATAATGATTAAAATTTC+TGG | - | chr4_3:51136039-51136058 | Msa0645730:CDS | 15.0% |
!! | CTTATCATTTATAAATCATA+AGG | - | chr4_3:51136277-51136296 | Msa0645730:intron | 15.0% |
!!! | GAAAGTATTATACTTAAAAA+AGG | + | chr4_3:51136464-51136483 | None:intergenic | 15.0% |
!!! | AACATATTTTAATTGAGAAA+CGG | + | chr4_3:51136620-51136639 | None:intergenic | 15.0% |
!!! | TTTTTATAAATGTCATTACA+AGG | - | chr4_3:51136823-51136842 | Msa0645730:intron | 15.0% |
!!! | ATATGTTTTGATCTTATTTA+AGG | - | chr4_3:51137666-51137685 | Msa0645730:CDS | 15.0% |
!! | TCATAAAAAAAAAATAGTAC+GGG | - | chr4_3:51138200-51138219 | Msa0645730:intron | 15.0% |
!! | TATAACATATAATAGTAGTT+TGG | + | chr4_3:51138370-51138389 | None:intergenic | 15.0% |
!! | TTATTTATTACCTATAAGTC+AGG | - | chr4_3:51134332-51134351 | Msa0645730:intron | 20.0% |
!!! | AGCAATAATAATTTGTGATT+AGG | - | chr4_3:51134994-51135013 | Msa0645730:intron | 20.0% |
!!! | TATATTGAACTGATTTCATT+AGG | - | chr4_3:51135133-51135152 | Msa0645730:intron | 20.0% |
!! | ATTTGAATAAGAATGACATT+TGG | - | chr4_3:51135187-51135206 | Msa0645730:intron | 20.0% |
!! | TGCTTATAAATTTGAAAAAC+TGG | - | chr4_3:51135214-51135233 | Msa0645730:intron | 20.0% |
!!! | GCATTTTTTTTCTTTTATTC+TGG | - | chr4_3:51135597-51135616 | Msa0645730:CDS | 20.0% |
!!! | TTTTTTTTCTTTTATTCTGG+GGG | - | chr4_3:51135600-51135619 | Msa0645730:CDS | 20.0% |
!!! | GTTCTTGATTTTTAGTTTTT+TGG | - | chr4_3:51135692-51135711 | Msa0645730:CDS | 20.0% |
!! | ACAAAACCAGAAATAAAAAA+TGG | + | chr4_3:51135728-51135747 | None:intergenic | 20.0% |
!!! | TGATTAAAATTTCTGGAAAA+TGG | - | chr4_3:51136046-51136065 | Msa0645730:CDS | 20.0% |
!!! | TAAATTTTTAAGAGCAAGTT+TGG | + | chr4_3:51136119-51136138 | None:intergenic | 20.0% |
!! | GAATACCTATAAAGTTATAA+CGG | + | chr4_3:51136668-51136687 | None:intergenic | 20.0% |
!! | TATAACTTTATAGGTATTCA+TGG | - | chr4_3:51136669-51136688 | Msa0645730:intron | 20.0% |
!! | TATGATATTGAATTTGTGTT+AGG | - | chr4_3:51136756-51136775 | Msa0645730:intron | 20.0% |
!! | TTATTGTTGTAATCTGATTA+TGG | - | chr4_3:51136779-51136798 | Msa0645730:intron | 20.0% |
!!! | AAAATCAAACTTTTATACAG+AGG | + | chr4_3:51137045-51137064 | None:intergenic | 20.0% |
!!! | GATTTTGGAATTTTTATGAT+TGG | - | chr4_3:51137103-51137122 | Msa0645730:intron | 20.0% |
!! | TATGATATTGAATTTGTGTT+TGG | - | chr4_3:51136756-51136775 | Msa0645730:intron | 20.0% |
!!! | AAGCATAGACATATTTTAAT+TGG | + | chr4_3:51137495-51137514 | None:intergenic | 20.0% |
!! | AAAAGTCATTATAAGTTCAT+AGG | - | chr4_3:51137528-51137547 | Msa0645730:intron | 20.0% |
!! | CTATAAACACCTTAAAATAA+TGG | + | chr4_3:51137627-51137646 | None:intergenic | 20.0% |
!!! | TTTCAATAAACCATTTTCTT+TGG | + | chr4_3:51138294-51138313 | None:intergenic | 20.0% |
!! | CTATTATATGTTATAGTAGT+TGG | - | chr4_3:51138375-51138394 | Msa0645730:CDS | 20.0% |
!! | CTATTTATAGACTAATTTGA+AGG | - | chr4_3:51138406-51138425 | Msa0645730:CDS | 20.0% |
!! | AATGTTACACATATAAGAAT+AGG | + | chr4_3:51138595-51138614 | None:intergenic | 20.0% |
!! | ATTCTTATATGTGTAACATT+CGG | - | chr4_3:51138595-51138614 | Msa0645730:CDS | 20.0% |
!! | TTCCAATTCTTTCAAATAAT+AGG | - | chr4_3:51138714-51138733 | Msa0645730:CDS | 20.0% |
!! | TCCAATTCTTTCAAATAATA+GGG | - | chr4_3:51138715-51138734 | Msa0645730:CDS | 20.0% |
!! | AATTTAATTGCAATCATTGA+AGG | + | chr4_3:51138835-51138854 | None:intergenic | 20.0% |
!! | ATGATTGCAATTAAATTTGA+TGG | - | chr4_3:51138838-51138857 | Msa0645730:CDS | 20.0% |
!! | TTTGTAGCATATAAATTTGA+TGG | - | chr4_3:51138913-51138932 | Msa0645730:CDS | 20.0% |
!!! | CTTTGAAATGCATTTATATA+TGG | + | chr4_3:51139162-51139181 | None:intergenic | 20.0% |
! | TTTAGCGATTCATGAAATTA+TGG | - | chr4_3:51133079-51133098 | Msa0645730:intron | 25.0% |
! | TCAAACTCAATTTCTTCTTA+AGG | + | chr4_3:51133342-51133361 | None:intergenic | 25.0% |
! | CATTAAATAACTGATGTATC+TGG | + | chr4_3:51133491-51133510 | None:intergenic | 25.0% |
! | ACATCAGTTATTTAATGAAC+TGG | - | chr4_3:51133494-51133513 | Msa0645730:CDS | 25.0% |
!! | TTATTAGAGCAAAGTCATTT+TGG | + | chr4_3:51133834-51133853 | None:intergenic | 25.0% |
! | ATATGAAAGTAATTGACATG+TGG | - | chr4_3:51133862-51133881 | Msa0645730:CDS | 25.0% |
! | TGATAAAACCACTTTGTAAA+CGG | + | chr4_3:51134623-51134642 | None:intergenic | 25.0% |
! | TGATCAATTGATGTTAAAGA+TGG | - | chr4_3:51134900-51134919 | Msa0645730:CDS | 25.0% |
! | TGATCAATTGATGTTAAAGA+TGG | - | chr4_3:51134900-51134919 | Msa0645730:CDS | 25.0% |
!! | TAGACTTTTGATGAAGTAAT+TGG | - | chr4_3:51135239-51135258 | Msa0645730:intron | 25.0% |
!!! | ATGCTTTATTGAATCAGTTT+TGG | - | chr4_3:51135515-51135534 | Msa0645730:intron | 25.0% |
!!! | GAATCAGTTTTGGTTATTTT+AGG | - | chr4_3:51135525-51135544 | Msa0645730:intron | 25.0% |
!!! | TTCCTTTTGATTTGATGTTA+AGG | - | chr4_3:51135563-51135582 | Msa0645730:CDS | 25.0% |
!!! | TTCCTTCCATTTTTTATTTC+TGG | - | chr4_3:51135719-51135738 | Msa0645730:CDS | 25.0% |
! | AACCAGAAATAAAAAATGGA+AGG | + | chr4_3:51135724-51135743 | None:intergenic | 25.0% |
!! | AAAATGGCTTTTGAATTAGA+TGG | - | chr4_3:51136062-51136081 | Msa0645730:CDS | 25.0% |
! | TATGTAATAACATCATGTCA+AGG | + | chr4_3:51136397-51136416 | None:intergenic | 25.0% |
!!! | ATTCCTTTTAACTATTTAGC+TGG | - | chr4_3:51136430-51136449 | Msa0645730:intron | 25.0% |
!!! | TTCCTTTTAACTATTTAGCT+GGG | - | chr4_3:51136431-51136450 | Msa0645730:intron | 25.0% |
! | AAAAGCCGTTATAACTTTAT+AGG | - | chr4_3:51136660-51136679 | Msa0645730:intron | 25.0% |
!! | TATGGTATTGAATTTCTGTT+TGG | - | chr4_3:51136797-51136816 | Msa0645730:intron | 25.0% |
!! | ACTTTTATACAGAGGTTAAT+TGG | + | chr4_3:51137037-51137056 | None:intergenic | 25.0% |
!! | TAATTGTTAGTCTATGAGAA+AGG | - | chr4_3:51137081-51137100 | Msa0645730:CDS | 25.0% |
!! | TTTCTTCAAGATTTTGTGTT+TGG | - | chr4_3:51137144-51137163 | Msa0645730:intron | 25.0% |
! | GATCAAAACATATAAAGCTT+GGG | + | chr4_3:51137659-51137678 | None:intergenic | 25.0% |
! | AGATCAAAACATATAAAGCT+TGG | + | chr4_3:51137660-51137679 | None:intergenic | 25.0% |
! | TATCTTAACTACTCTGATAT+AGG | - | chr4_3:51137796-51137815 | Msa0645730:intron | 25.0% |
!! | TTGACGTATATATTTCTACT+AGG | - | chr4_3:51137819-51137838 | Msa0645730:intron | 25.0% |
!! | TGACGTATATATTTCTACTA+GGG | - | chr4_3:51137820-51137839 | Msa0645730:intron | 25.0% |
! | TTGAAAGAAAAAACAAAGTC+AGG | + | chr4_3:51138052-51138071 | None:intergenic | 25.0% |
! | ATTCTTCCATTAATTAAGAG+TGG | - | chr4_3:51138249-51138268 | Msa0645730:intron | 25.0% |
!! | CTTTTTCCACTCTTAATTAA+TGG | + | chr4_3:51138258-51138277 | None:intergenic | 25.0% |
! | TTTCAAAGTTGCTTAAAGTT+TGG | - | chr4_3:51138644-51138663 | Msa0645730:CDS | 25.0% |
! | TCCCTATTATTTGAAAGAAT+TGG | + | chr4_3:51138719-51138738 | None:intergenic | 25.0% |
!!! | TTTTTTTTTTGCTGAGTCTT+TGG | - | chr4_3:51138739-51138758 | Msa0645730:CDS | 25.0% |
! | AAAAGATAGAATAATCAGGA+AGG | + | chr4_3:51138810-51138829 | None:intergenic | 25.0% |
!! | ATCTTTTGTAGCAGATAAAT+TGG | - | chr4_3:51138865-51138884 | Msa0645730:CDS | 25.0% |
!!! | CTTTTGTGCTATTAAATATG+AGG | - | chr4_3:51138942-51138961 | Msa0645730:CDS | 25.0% |
!!! | TATGAGGTATTTTTTGCAAT+TGG | - | chr4_3:51138958-51138977 | Msa0645730:CDS | 25.0% |
! | TTGTTAACAAACTGAAGTAA+GGG | + | chr4_3:51139005-51139024 | None:intergenic | 25.0% |
! | ATTGTTAACAAACTGAAGTA+AGG | + | chr4_3:51139006-51139025 | None:intergenic | 25.0% |
! | TGATTCACATTAAATGCATA+AGG | + | chr4_3:51139191-51139210 | None:intergenic | 25.0% |
! | ATTATTCAGCTATAATTCTG+TGG | - | chr4_3:51139361-51139380 | Msa0645730:intron | 25.0% |
! | TTATTCAGCTATAATTCTGT+GGG | - | chr4_3:51139362-51139381 | Msa0645730:intron | 25.0% |
! | GAAAAAAGCTTAAACCAAAA+GGG | + | chr4_3:51139727-51139746 | None:intergenic | 25.0% |
! | AGAAAAAAGCTTAAACCAAA+AGG | + | chr4_3:51139728-51139747 | None:intergenic | 25.0% |
TTGAATTTGGAGAAAGAAGA+TGG | - | chr4_3:51133037-51133056 | Msa0645730:intron | 30.0% | |
GTTATTGACACATGAAATTC+TGG | + | chr4_3:51133129-51133148 | None:intergenic | 30.0% | |
GAATTTCATGTGTCAATAAC+AGG | - | chr4_3:51133129-51133148 | Msa0645730:intron | 30.0% | |
GACTCTAATAATCCAAAGTT+AGG | + | chr4_3:51133410-51133429 | None:intergenic | 30.0% | |
ATAGGCACCAATAACAATTT+GGG | - | chr4_3:51133594-51133613 | Msa0645730:CDS | 30.0% | |
! | GGTTTTACCCAAATTGTTAT+TGG | + | chr4_3:51133604-51133623 | None:intergenic | 30.0% |
! | CAATTTGGGTAAAACCATTT+TGG | - | chr4_3:51133608-51133627 | Msa0645730:CDS | 30.0% |
CAAACATTCATGAACCAAAA+TGG | + | chr4_3:51133625-51133644 | None:intergenic | 30.0% | |
ACTAACTAAATAGACACTTG+AGG | + | chr4_3:51133695-51133714 | None:intergenic | 30.0% | |
!! | AAGCTTTTGTTATGTATCCT+TGG | - | chr4_3:51134031-51134050 | Msa0645730:intron | 30.0% |
ATTCACGAAATGATCATAGA+AGG | + | chr4_3:51134310-51134329 | None:intergenic | 30.0% | |
TCTATTGGTAAGAAGATTTC+TGG | + | chr4_3:51134496-51134515 | None:intergenic | 30.0% | |
TTTATCAAACTGCTTGAAGA+AGG | - | chr4_3:51134636-51134655 | Msa0645730:intron | 30.0% | |
! | TGGAAAAAGACTAATGCTTT+TGG | + | chr4_3:51134667-51134686 | None:intergenic | 30.0% |
TTACAGCAATTGAACAAAGA+GGG | + | chr4_3:51134698-51134717 | None:intergenic | 30.0% | |
! | AACTGATTTCATTAGGTGTA+GGG | - | chr4_3:51135140-51135159 | Msa0645730:intron | 30.0% |
TGAAAGTCATAATCTGTTGA+TGG | - | chr4_3:51135416-51135435 | Msa0645730:intron | 30.0% | |
!!! | CAGTTTTGGTTATTTTAGGT+TGG | - | chr4_3:51135529-51135548 | Msa0645730:intron | 30.0% |
AGCCTTAACATCAAATCAAA+AGG | + | chr4_3:51135568-51135587 | None:intergenic | 30.0% | |
TCTTTGCATTTCTACAAGAT+TGG | - | chr4_3:51135668-51135687 | Msa0645730:CDS | 30.0% | |
!!! | TTTTGTTGTTTGTGTGATTG+TGG | - | chr4_3:51135742-51135761 | Msa0645730:intron | 30.0% |
ATTAGTAGTCATCATTTGAG+AGG | + | chr4_3:51136498-51136517 | None:intergenic | 30.0% | |
ACTACTAATAGAGCTCTTTA+TGG | - | chr4_3:51136509-51136528 | Msa0645730:intron | 30.0% | |
TTTAATTGAGAAACGGCATA+AGG | + | chr4_3:51136613-51136632 | None:intergenic | 30.0% | |
!!! | AACGGCTTTTTTCATAACAT+AGG | + | chr4_3:51136650-51136669 | None:intergenic | 30.0% |
! | TAGTCTATGAGAAAGGATTT+TGG | - | chr4_3:51137088-51137107 | Msa0645730:intron | 30.0% |
!! | TACGACAAGCCATTATTTTA+AGG | - | chr4_3:51137615-51137634 | Msa0645730:CDS | 30.0% |
ATCAAAGATGGACAAGTTAT+AGG | - | chr4_3:51137943-51137962 | Msa0645730:intron | 30.0% | |
GTATAGTTACAGAAATTGCA+AGG | + | chr4_3:51138010-51138029 | None:intergenic | 30.0% | |
! | ATATTTGACTCGAGTAGTTT+GGG | - | chr4_3:51138170-51138189 | Msa0645730:intron | 30.0% |
ATAGACTAATTTGAAGGCTA+TGG | - | chr4_3:51138412-51138431 | Msa0645730:CDS | 30.0% | |
GGACAAAAGATAGAATAATC+AGG | + | chr4_3:51138814-51138833 | None:intergenic | 30.0% | |
TTTGTAGCAGATAAATTGGA+TGG | - | chr4_3:51138869-51138888 | Msa0645730:CDS | 30.0% | |
GGTTTAAACTGATATTTGTG+AGG | + | chr4_3:51139054-51139073 | None:intergenic | 30.0% | |
GAATCTGTCAAATGAGTTTA+AGG | + | chr4_3:51139075-51139094 | None:intergenic | 30.0% | |
! | ATTCATGTTTCTTCTTTTCC+TGG | - | chr4_3:51139105-51139124 | Msa0645730:intron | 30.0% |
TTTAATGTGAATCACGACTT+TGG | - | chr4_3:51139197-51139216 | Msa0645730:intron | 30.0% | |
TCTATCTGAAAGCAACATAT+TGG | - | chr4_3:51139269-51139288 | Msa0645730:intron | 30.0% | |
! | TTTTGAGCTTATTACCCTTT+TGG | - | chr4_3:51139710-51139729 | Msa0645730:intron | 30.0% |
!!! | GTTTAAGCTTTTTTCTTCCT+TGG | - | chr4_3:51139732-51139751 | Msa0645730:intron | 30.0% |
! | TTTTGTAATGCGGTAAAATG+CGG | + | chr4_3:51139840-51139859 | None:intergenic | 30.0% |
AATGAATACTATGCACACAA+GGG | + | chr4_3:51139895-51139914 | None:intergenic | 30.0% | |
AAATGAATACTATGCACACA+AGG | + | chr4_3:51139896-51139915 | None:intergenic | 30.0% | |
! | TATGCTATGATAATGTTGTC+TGG | - | chr4_3:51139946-51139965 | Msa0645730:exon | 30.0% |
!! | TTTGTTCATCCTTAATTTGC+AGG | - | chr4_3:51140010-51140029 | Msa0645730:five_prime_UTR | 30.0% |
TACAATGATCCTGCAAATTA+AGG | + | chr4_3:51140022-51140041 | None:intergenic | 30.0% | |
TAAGCATCATAAGAGAAGCA+GGG | - | chr4_3:51132935-51132954 | Msa0645730:CDS | 35.0% | |
TGAGTATAAGAGAGACATTC+TGG | - | chr4_3:51132966-51132985 | Msa0645730:intron | 35.0% | |
GAAGAAAGAGCGATTGAATT+TGG | - | chr4_3:51133024-51133043 | Msa0645730:intron | 35.0% | |
! | TTGGAGAAAGAAGATGGATT+TGG | - | chr4_3:51133043-51133062 | Msa0645730:intron | 35.0% |
! | AAGATGGATTTGGAATCAGT+TGG | - | chr4_3:51133053-51133072 | Msa0645730:intron | 35.0% |
TGAAATTCTGGCAATGTCTT+CGG | + | chr4_3:51133117-51133136 | None:intergenic | 35.0% | |
TTTGGACCAAAGAGAATCAT+CGG | + | chr4_3:51133171-51133190 | None:intergenic | 35.0% | |
CATAGGCACCAATAACAATT+TGG | - | chr4_3:51133593-51133612 | Msa0645730:CDS | 35.0% | |
TACAAAGAAAGAGACACTTG+TGG | - | chr4_3:51133765-51133784 | Msa0645730:intron | 35.0% | |
TAACAACATCTCACTCATTC+AGG | - | chr4_3:51133806-51133825 | Msa0645730:intron | 35.0% | |
AACAACATCTCACTCATTCA+GGG | - | chr4_3:51133807-51133826 | Msa0645730:intron | 35.0% | |
GTTGGGACAATATAAAAACC+TGG | - | chr4_3:51134079-51134098 | Msa0645730:intron | 35.0% | |
! | CTTAGCTTCTGGAAAGTTAT+TGG | + | chr4_3:51134109-51134128 | None:intergenic | 35.0% |
CAATAACTTTCCAGAAGCTA+AGG | - | chr4_3:51134107-51134126 | Msa0645730:intron | 35.0% | |
ATCCTTTACCGCTTTCATAA+TGG | - | chr4_3:51134213-51134232 | Msa0645730:intron | 35.0% | |
TCCTTTACCGCTTTCATAAT+GGG | - | chr4_3:51134214-51134233 | Msa0645730:intron | 35.0% | |
TTTCTTGCCCATTATGAAAG+CGG | + | chr4_3:51134224-51134243 | None:intergenic | 35.0% | |
! | ACTTCTTTGGGAATTATTGG+TGG | - | chr4_3:51134279-51134298 | Msa0645730:intron | 35.0% |
TCTTGGATTACCTGACTTAT+AGG | + | chr4_3:51134345-51134364 | None:intergenic | 35.0% | |
AAGATCCAAGTATGTTCTTG+TGG | - | chr4_3:51134401-51134420 | Msa0645730:intron | 35.0% | |
TGCAAACTAATCAGATTCTG+AGG | + | chr4_3:51134537-51134556 | None:intergenic | 35.0% | |
!! | GATTAGTTTGCATCATGAGA+TGG | - | chr4_3:51134545-51134564 | Msa0645730:intron | 35.0% |
TACAGCAATTGAACAAAGAG+GGG | + | chr4_3:51134697-51134716 | None:intergenic | 35.0% | |
GTTACAGCAATTGAACAAAG+AGG | + | chr4_3:51134699-51134718 | None:intergenic | 35.0% | |
TGTTCAATTGCTGTAACCAA+TGG | - | chr4_3:51134702-51134721 | Msa0645730:intron | 35.0% | |
!! | GAGATTTTTGCTAGCTTCTT+TGG | - | chr4_3:51134952-51134971 | Msa0645730:intron | 35.0% |
!! | GAGATTTTTGCTAGCTTCTT+TGG | - | chr4_3:51134952-51134971 | Msa0645730:intron | 35.0% |
! | GAACTGATTTCATTAGGTGT+AGG | - | chr4_3:51135139-51135158 | Msa0645730:intron | 35.0% |
ACATTATCAGAAACACCAGA+AGG | + | chr4_3:51135462-51135481 | None:intergenic | 35.0% | |
! | TATTCTGGGGGAATTTGAAA+TGG | - | chr4_3:51135612-51135631 | Msa0645730:CDS | 35.0% |
GTGTTCAGAATTTCAATCGA+TGG | - | chr4_3:51135817-51135836 | Msa0645730:intron | 35.0% | |
GTGTTTGTTCATTGTTGTAC+AGG | - | chr4_3:51135880-51135899 | Msa0645730:intron | 35.0% | |
TCTTTCTGTTTCAGAACTGT+CGG | - | chr4_3:51135904-51135923 | Msa0645730:intron | 35.0% | |
GTAGATACTGAATCTGACTT+TGG | + | chr4_3:51135946-51135965 | None:intergenic | 35.0% | |
! | AAGAATGTTGATGAAGCTCT+GGG | - | chr4_3:51135968-51135987 | Msa0645730:intron | 35.0% |
TCTTGATGAGTGTTTGGTAT+AGG | + | chr4_3:51136208-51136227 | None:intergenic | 35.0% | |
ATAACATCATGTCAAGGCTA+CGG | + | chr4_3:51136391-51136410 | None:intergenic | 35.0% | |
GTCCCAGCTAAATAGTTAAA+AGG | + | chr4_3:51136436-51136455 | None:intergenic | 35.0% | |
GGCTTCACTTAACAATCAAT+AGG | - | chr4_3:51136554-51136573 | Msa0645730:intron | 35.0% | |
ATCACATTCGATGCTTGTAA+AGG | + | chr4_3:51136736-51136755 | None:intergenic | 35.0% | |
TGTGAATGTGATTGTGAGAT+TGG | - | chr4_3:51137216-51137235 | Msa0645730:intron | 35.0% | |
TGTGAGATTGGATTTGTGTT+TGG | - | chr4_3:51137228-51137247 | Msa0645730:intron | 35.0% | |
AAATCAGGTATGACCCAATT+TGG | - | chr4_3:51137444-51137463 | Msa0645730:intron | 35.0% | |
TGCTTTGTCAATCATCAACT+AGG | - | chr4_3:51137705-51137724 | Msa0645730:intron | 35.0% | |
GCTTTGTCAATCATCAACTA+GGG | - | chr4_3:51137706-51137725 | Msa0645730:intron | 35.0% | |
CTTTGTCAATCATCAACTAG+GGG | - | chr4_3:51137707-51137726 | Msa0645730:intron | 35.0% | |
GTATTCTTCAAATGTTTGCC+AGG | - | chr4_3:51137855-51137874 | Msa0645730:intron | 35.0% | |
TGCAAAAAATACGACAAACC+TGG | + | chr4_3:51137876-51137895 | None:intergenic | 35.0% | |
TGGACAAGTTATAGGTTATG+TGG | - | chr4_3:51137951-51137970 | Msa0645730:intron | 35.0% | |
TTATAGGTTATGTGGATCAG+TGG | - | chr4_3:51137959-51137978 | Msa0645730:intron | 35.0% | |
TATAGGTTATGTGGATCAGT+GGG | - | chr4_3:51137960-51137979 | Msa0645730:intron | 35.0% | |
! | GATATTTGACTCGAGTAGTT+TGG | - | chr4_3:51138169-51138188 | Msa0645730:intron | 35.0% |
TTGACGTAGACCAAAGAAAA+TGG | - | chr4_3:51138281-51138300 | Msa0645730:CDS | 35.0% | |
GTGAGGTTATAACCTATTGT+TGG | + | chr4_3:51139037-51139056 | None:intergenic | 35.0% | |
CTGAATAATCTATGATGCCA+AGG | + | chr4_3:51139350-51139369 | None:intergenic | 35.0% | |
CAAAGATTTCTTCTCAACCA+AGG | + | chr4_3:51139752-51139771 | None:intergenic | 35.0% | |
AAAATATCTCTCCCTAAGAG+AGG | - | chr4_3:51139776-51139795 | Msa0645730:CDS | 35.0% | |
! | CACAGTGAACTTTTGTAATG+CGG | + | chr4_3:51139850-51139869 | None:intergenic | 35.0% |
!!! | CACACAAGGGTTTTAAATTG+TGG | + | chr4_3:51139882-51139901 | None:intergenic | 35.0% |
!!! | GATCATTGTAGCTTTTTTCG+CGG | - | chr4_3:51140032-51140051 | Msa0645730:five_prime_UTR | 35.0% |
GTAAGCATCATAAGAGAAGC+AGG | - | chr4_3:51132934-51132953 | Msa0645730:CDS | 40.0% | |
GAAATTCTGGCAATGTCTTC+GGG | + | chr4_3:51133116-51133135 | None:intergenic | 40.0% | |
! | AAGTTCACGGAAGCAGATTT+TGG | + | chr4_3:51133189-51133208 | None:intergenic | 40.0% |
GTTGAGTGAGAGAAAGTTCA+CGG | + | chr4_3:51133202-51133221 | None:intergenic | 40.0% | |
ACTCAACCCATTGATCATCT+CGG | - | chr4_3:51133215-51133234 | Msa0645730:intron | 40.0% | |
GAAATGAAGAGTGACCTTGA+AGG | + | chr4_3:51133255-51133274 | None:intergenic | 40.0% | |
AATTGAGTTTGAATCCCAGC+TGG | - | chr4_3:51133350-51133369 | Msa0645730:CDS | 40.0% | |
TAATCCAAAGTTAGGTCGAG+AGG | + | chr4_3:51133402-51133421 | None:intergenic | 40.0% | |
! | ACATCCATGGACTATAAGGA+CGG | + | chr4_3:51133653-51133672 | None:intergenic | 40.0% |
! | CGATACATCCATGGACTATA+AGG | + | chr4_3:51133657-51133676 | None:intergenic | 40.0% |
TTGCGATTTCGATACATCCA+TGG | + | chr4_3:51133666-51133685 | None:intergenic | 40.0% | |
AAGAAAGAGACACTTGTGGA+TGG | - | chr4_3:51133769-51133788 | Msa0645730:intron | 40.0% | |
! | TGTGGATGGATTTGCAACTT+TGG | - | chr4_3:51133783-51133802 | Msa0645730:intron | 40.0% |
ACACTTCAGATTGAAGGTCT+GGG | + | chr4_3:51133923-51133942 | None:intergenic | 40.0% | |
AACACTTCAGATTGAAGGTC+TGG | + | chr4_3:51133924-51133943 | None:intergenic | 40.0% | |
! | AGACCTTCAATCTGAAGTGT+TGG | - | chr4_3:51133923-51133942 | Msa0645730:intron | 40.0% |
ACACCAACACTTCAGATTGA+AGG | + | chr4_3:51133929-51133948 | None:intergenic | 40.0% | |
!! | TTCAATCTGAAGTGTTGGTG+TGG | - | chr4_3:51133928-51133947 | Msa0645730:intron | 40.0% |
TGCAGGAAGCTTATCAAACT+TGG | - | chr4_3:51134004-51134023 | Msa0645730:intron | 40.0% | |
CTCTTGTTAAGCGTGTCAAA+AGG | - | chr4_3:51134055-51134074 | Msa0645730:intron | 40.0% | |
! | TTAAGCGTGTCAAAAGGTGT+TGG | - | chr4_3:51134061-51134080 | Msa0645730:intron | 40.0% |
!! | TAAGCGTGTCAAAAGGTGTT+GGG | - | chr4_3:51134062-51134081 | Msa0645730:intron | 40.0% |
CAAAGAGTTTCCTTAGCTTC+TGG | + | chr4_3:51134120-51134139 | None:intergenic | 40.0% | |
GCTAAGGAAACTCTTTGTGA+AGG | - | chr4_3:51134123-51134142 | Msa0645730:intron | 40.0% | |
AGAAGCTGAGATTCAAGAGT+TGG | - | chr4_3:51134152-51134171 | Msa0645730:intron | 40.0% | |
TCAAATTGCCTCTTCCTACA+AGG | - | chr4_3:51134190-51134209 | Msa0645730:intron | 40.0% | |
TAAAGGATCCTTGTAGGAAG+AGG | + | chr4_3:51134201-51134220 | None:intergenic | 40.0% | |
! | GGCACTTCTTTGGGAATTAT+TGG | - | chr4_3:51134276-51134295 | Msa0645730:intron | 40.0% |
!! | GCGAAATTTGCTGAGTTTCT+TGG | + | chr4_3:51134362-51134381 | None:intergenic | 40.0% |
CAGCAAATTTCGCACAACTT+AGG | - | chr4_3:51134369-51134388 | Msa0645730:intron | 40.0% | |
TTCTTCCTCAACTGTACCAA+TGG | - | chr4_3:51134453-51134472 | Msa0645730:intron | 40.0% | |
ACCAATGGTCAACTATACGT+TGG | - | chr4_3:51134468-51134487 | Msa0645730:intron | 40.0% | |
CCAATGGTCAACTATACGTT+GGG | - | chr4_3:51134469-51134488 | Msa0645730:intron | 40.0% | |
ACATGGCATCAAGTCTCTAT+TGG | + | chr4_3:51134511-51134530 | None:intergenic | 40.0% | |
! | ATCAGATTCTGAGGAACACA+TGG | + | chr4_3:51134528-51134547 | None:intergenic | 40.0% |
TTGCTTCGCACATAGTTCAA+TGG | + | chr4_3:51135279-51135298 | None:intergenic | 40.0% | |
TTAGTTGAAGAAGAAGTCGC+CGG | - | chr4_3:51135310-51135329 | Msa0645730:intron | 40.0% | |
!! | ATAATCTGTTGATGGCCTCT+GGG | - | chr4_3:51135424-51135443 | Msa0645730:intron | 40.0% |
TGTGATTGTGGTTGAATTGC+TGG | - | chr4_3:51135754-51135773 | Msa0645730:intron | 40.0% | |
GTGATTGTGGTTGAATTGCT+GGG | - | chr4_3:51135755-51135774 | Msa0645730:intron | 40.0% | |
ATACTGAATCTGACTTTGGC+GGG | + | chr4_3:51135942-51135961 | None:intergenic | 40.0% | |
GATACTGAATCTGACTTTGG+CGG | + | chr4_3:51135943-51135962 | None:intergenic | 40.0% | |
! | GAAGAATGTTGATGAAGCTC+TGG | - | chr4_3:51135967-51135986 | Msa0645730:intron | 40.0% |
TGTGAGTCTTGATGAGTGTT+TGG | + | chr4_3:51136214-51136233 | None:intergenic | 40.0% | |
TAACATCATGTCAAGGCTAC+GGG | + | chr4_3:51136390-51136409 | None:intergenic | 40.0% | |
CATCATTTGAGAGGCTAGAT+TGG | + | chr4_3:51136489-51136508 | None:intergenic | 40.0% | |
GTATGTGCTATGTCGCAATT+TGG | - | chr4_3:51136576-51136595 | Msa0645730:intron | 40.0% | |
ACATTCGATGCTTGTAAAGG+TGG | + | chr4_3:51136733-51136752 | None:intergenic | 40.0% | |
! | GCAATCCTCGCAATTTTCTT+TGG | - | chr4_3:51137279-51137298 | Msa0645730:intron | 40.0% |
ATTCGCCAAAGAAAATTGCG+AGG | + | chr4_3:51137287-51137306 | None:intergenic | 40.0% | |
! | TTTTCTTTGGCGAATTCTGC+AGG | - | chr4_3:51137292-51137311 | Msa0645730:intron | 40.0% |
ATTAGTCGTCATCAGTTGAG+AGG | + | chr4_3:51137374-51137393 | None:intergenic | 40.0% | |
! | TCTCAACTGATGACGACTAA+TGG | - | chr4_3:51137373-51137392 | Msa0645730:intron | 40.0% |
GCTGCAGACTAATCCAAATT+GGG | + | chr4_3:51137460-51137479 | None:intergenic | 40.0% | |
AGCTGCAGACTAATCCAAAT+TGG | + | chr4_3:51137461-51137480 | None:intergenic | 40.0% | |
! | GGTGTTTGTTGAAACGTTAG+AGG | - | chr4_3:51137549-51137568 | Msa0645730:intron | 40.0% |
CTTGTCGTATATGTTCGTAC+AGG | + | chr4_3:51137604-51137623 | None:intergenic | 40.0% | |
ATAGGTTATGTGGATCAGTG+GGG | - | chr4_3:51137961-51137980 | Msa0645730:intron | 40.0% | |
ATTGCAAGGTCACCTTAACA+GGG | + | chr4_3:51137996-51138015 | None:intergenic | 40.0% | |
AATTGCAAGGTCACCTTAAC+AGG | + | chr4_3:51137997-51138016 | None:intergenic | 40.0% | |
! | AGTGTTGAAGCTACTCTTTC+AGG | - | chr4_3:51138098-51138117 | Msa0645730:intron | 40.0% |
TTGAAGCTACTCTTTCAGGA+TGG | - | chr4_3:51138102-51138121 | Msa0645730:intron | 40.0% | |
CAACATGACATGAGAGAGTA+AGG | + | chr4_3:51138438-51138457 | None:intergenic | 40.0% | |
GGTTAGTAACTATCTGCAAC+TGG | + | chr4_3:51138519-51138538 | None:intergenic | 40.0% | |
TAGGTCTGATGCGTAAAAAC+AGG | + | chr4_3:51138576-51138595 | None:intergenic | 40.0% | |
! | ACTTTGAAAGTTCACCAGTC+AGG | + | chr4_3:51138633-51138652 | None:intergenic | 40.0% |
GAATAATCAGGAAGGTTCGA+AGG | + | chr4_3:51138802-51138821 | None:intergenic | 40.0% | |
CAATGCAGAGATCCAACAAT+AGG | - | chr4_3:51139022-51139041 | Msa0645730:intron | 40.0% | |
CTAATTAATGACCCTGATGC+AGG | - | chr4_3:51139297-51139316 | Msa0645730:intron | 40.0% | |
! | ATGCAGGAATTGGTTCAGAT+TGG | - | chr4_3:51139313-51139332 | Msa0645730:intron | 40.0% |
AGCTATAATTCTGTGGGTGA+TGG | - | chr4_3:51139368-51139387 | Msa0645730:intron | 40.0% | |
TGTTGCTGCAGATAAAACCA+TGG | - | chr4_3:51139557-51139576 | Msa0645730:intron | 40.0% | |
TTACTTTGTAGTCCTCACCA+AGG | + | chr4_3:51139611-51139630 | None:intergenic | 40.0% | |
AGAAATGGTCTCCTCTCTTA+GGG | + | chr4_3:51139790-51139809 | None:intergenic | 40.0% | |
TAGAAATGGTCTCCTCTCTT+AGG | + | chr4_3:51139791-51139810 | None:intergenic | 40.0% | |
TCACCTCCGATGATTCTCTT+TGG | - | chr4_3:51133162-51133181 | Msa0645730:intron | 45.0% | |
GGGTTTCCGAGATGATCAAT+GGG | + | chr4_3:51133224-51133243 | None:intergenic | 45.0% | |
AAGAGTGACCTTGAAGGAAG+GGG | + | chr4_3:51133249-51133268 | None:intergenic | 45.0% | |
GAAGAGTGACCTTGAAGGAA+GGG | + | chr4_3:51133250-51133269 | None:intergenic | 45.0% | |
TGAAGAGTGACCTTGAAGGA+AGG | + | chr4_3:51133251-51133270 | None:intergenic | 45.0% | |
AGTTTGAATCCCAGCTGGAA+CGG | - | chr4_3:51133355-51133374 | Msa0645730:CDS | 45.0% | |
CTTACCTCTCGACCTAACTT+TGG | - | chr4_3:51133395-51133414 | Msa0645730:CDS | 45.0% | |
CTCTGTCTATCTTAACCCCT+CGG | + | chr4_3:51133446-51133465 | None:intergenic | 45.0% | |
AGTGACACATAGACGAACAC+CGG | - | chr4_3:51133549-51133568 | Msa0645730:CDS | 45.0% | |
TCACTATCAGTGGTCATGTC+CGG | + | chr4_3:51133571-51133590 | None:intergenic | 45.0% | |
! | GACCACTGATAGTGACACAT+AGG | - | chr4_3:51133576-51133595 | Msa0645730:CDS | 45.0% |
! | TGCCTATGTGTCACTATCAG+TGG | + | chr4_3:51133581-51133600 | None:intergenic | 45.0% |
TACACCGTCCTTATAGTCCA+TGG | - | chr4_3:51133646-51133665 | Msa0645730:CDS | 45.0% | |
ACATGTGGTCAGTGTCGTAT+GGG | - | chr4_3:51133877-51133896 | Msa0645730:CDS | 45.0% | |
ACTTCAGATTGAAGGTCTGG+GGG | + | chr4_3:51133921-51133940 | None:intergenic | 45.0% | |
CACTTCAGATTGAAGGTCTG+GGG | + | chr4_3:51133922-51133941 | None:intergenic | 45.0% | |
!! | TGTGTTTTGTTGTGCTGTGC+AGG | - | chr4_3:51133987-51134006 | Msa0645730:intron | 45.0% |
ACACGCTTAACAAGAGACCA+AGG | + | chr4_3:51134051-51134070 | None:intergenic | 45.0% | |
TGGAAAGTTATTGGTGAGCC+AGG | + | chr4_3:51134100-51134119 | None:intergenic | 45.0% | |
AGCTGAGATTCAAGAGTTGG+AGG | - | chr4_3:51134155-51134174 | Msa0645730:intron | 45.0% | |
AAGCGGTAAAGGATCCTTGT+AGG | + | chr4_3:51134207-51134226 | None:intergenic | 45.0% | |
GCCCATTATGAAAGCGGTAA+AGG | + | chr4_3:51134218-51134237 | None:intergenic | 45.0% | |
!! | CAAAGAAGTGCCAGATGTGT+CGG | + | chr4_3:51134268-51134287 | None:intergenic | 45.0% |
GACACATCTGGCACTTCTTT+GGG | - | chr4_3:51134267-51134286 | Msa0645730:intron | 45.0% | |
AGCAGCCACAAGAACATACT+TGG | + | chr4_3:51134409-51134428 | None:intergenic | 45.0% | |
GAACAACTTCTCACTGTACG+TGG | + | chr4_3:51134436-51134455 | None:intergenic | 45.0% | |
GTTGACCATTGGTACAGTTG+AGG | + | chr4_3:51134461-51134480 | None:intergenic | 45.0% | |
CCCAACGTATAGTTGACCAT+TGG | + | chr4_3:51134472-51134491 | None:intergenic | 45.0% | |
TCATGAGATGGACAGCGAAA+AGG | - | chr4_3:51134557-51134576 | Msa0645730:intron | 45.0% | |
CTCTTCTAACCACAGTAGCA+TGG | + | chr4_3:51134592-51134611 | None:intergenic | 45.0% | |
CTACTGTGGTTAGAAGAGCA+TGG | - | chr4_3:51134594-51134613 | Msa0645730:intron | 45.0% | |
CATGGTCACCGTTTACAAAG+TGG | - | chr4_3:51134612-51134631 | Msa0645730:intron | 45.0% | |
GAACAAAGAGGGGATTCTTC+TGG | + | chr4_3:51134687-51134706 | None:intergenic | 45.0% | |
AGGTGTAGGGCTCATAGATA+TGG | - | chr4_3:51135153-51135172 | Msa0645730:intron | 45.0% | |
! | ATTGGACGATTTGGCGATTC+CGG | - | chr4_3:51135374-51135393 | Msa0645730:intron | 45.0% |
!! | CATAATCTGTTGATGGCCTC+TGG | - | chr4_3:51135423-51135442 | Msa0645730:intron | 45.0% |
AACACCAGAAGGACCACTTT+GGG | + | chr4_3:51135451-51135470 | None:intergenic | 45.0% | |
AAACACCAGAAGGACCACTT+TGG | + | chr4_3:51135452-51135471 | None:intergenic | 45.0% | |
!! | TGAAGCTCTGGGTATGTATG+AGG | - | chr4_3:51135979-51135998 | Msa0645730:intron | 45.0% |
GAGCTCTTTATGGTCAGAAG+CGG | - | chr4_3:51136519-51136538 | Msa0645730:intron | 45.0% | |
! | GTGGTGCTTCCAATTTTGGA+CGG | - | chr4_3:51136891-51136910 | Msa0645730:intron | 45.0% |
AGAAGCTGACCGTCCAAAAT+TGG | + | chr4_3:51136903-51136922 | None:intergenic | 45.0% | |
GCTCATCAACAGCAATTAGC+CGG | - | chr4_3:51136929-51136948 | Msa0645730:intron | 45.0% | |
TTGGTTAGACTGTGTTGCAC+CGG | + | chr4_3:51137018-51137037 | None:intergenic | 45.0% | |
!! | GGATTTGTGTTTGGTGTAGC+CGG | - | chr4_3:51137237-51137256 | Msa0645730:intron | 45.0% |
!! | GATTTGTGTTTGGTGTAGCC+GGG | - | chr4_3:51137238-51137257 | Msa0645730:intron | 45.0% |
!! | ATTTGTGTTTGGTGTAGCCG+GGG | - | chr4_3:51137239-51137258 | Msa0645730:intron | 45.0% |
AAGGAACACAACAAGCCAGT+GGG | - | chr4_3:51137326-51137345 | Msa0645730:intron | 45.0% | |
CATCAGTTGAGAGGCTAGAT+TGG | + | chr4_3:51137365-51137384 | None:intergenic | 45.0% | |
GCAGGCTCTGCTTAAAAATC+AGG | - | chr4_3:51137429-51137448 | Msa0645730:intron | 45.0% | |
CAAAGTCAGGAGCTGTACTT+AGG | + | chr4_3:51138039-51138058 | None:intergenic | 45.0% | |
TCAAACCTTGCAGTCAGATG+TGG | - | chr4_3:51138068-51138087 | Msa0645730:intron | 45.0% | |
AAGCTACTCTTTCAGGATGG+AGG | - | chr4_3:51138105-51138124 | Msa0645730:intron | 45.0% | |
CACCTACTGTCAACAACACT+CGG | - | chr4_3:51138538-51138557 | Msa0645730:CDS | 45.0% | |
GTTCACCAGTCAGGATAAGT+AGG | + | chr4_3:51138624-51138643 | None:intergenic | 45.0% | |
! | TCTTCTTTTCCTGGAGTTCC+TGG | - | chr4_3:51139114-51139133 | Msa0645730:intron | 45.0% |
AGTTCCTGGAGGAAAAGGTA+AGG | - | chr4_3:51139128-51139147 | Msa0645730:intron | 45.0% | |
GTTCCTGGAGGAAAAGGTAA+GGG | - | chr4_3:51139129-51139148 | Msa0645730:intron | 45.0% | |
ATCTTAACAGCTTCGCCAAC+AGG | + | chr4_3:51139249-51139268 | None:intergenic | 45.0% | |
AATGACCCTGATGCAGGAAT+TGG | - | chr4_3:51139303-51139322 | Msa0645730:intron | 45.0% | |
CTGAACCAATTCCTGCATCA+GGG | + | chr4_3:51139311-51139330 | None:intergenic | 45.0% | |
TCTGAACCAATTCCTGCATC+AGG | + | chr4_3:51139312-51139331 | None:intergenic | 45.0% | |
TTGGTTCAGATTGGAGAGAC+AGG | - | chr4_3:51139322-51139341 | Msa0645730:intron | 45.0% | |
ACAACAACAGCTGCTAGAGT+TGG | - | chr4_3:51139429-51139448 | Msa0645730:intron | 45.0% | |
CCAAGGTTATTTGCAGCTTG+CGG | + | chr4_3:51139594-51139613 | None:intergenic | 45.0% | |
AGCTGCAAATAACCTTGGTG+AGG | - | chr4_3:51139596-51139615 | Msa0645730:intron | 45.0% | |
AGAACCCTTCAAGTCAGCAA+CGG | - | chr4_3:51139641-51139660 | Msa0645730:intron | 45.0% | |
!! | CTTACCGTTGCTGACTTGAA+GGG | + | chr4_3:51139648-51139667 | None:intergenic | 45.0% |
!! | AGACCATTTCTAGCTGAGAC+AGG | - | chr4_3:51139799-51139818 | Msa0645730:CDS | 45.0% |
TGTTGTCTGGCATGTGCAAA+TGG | - | chr4_3:51139959-51139978 | Msa0645730:five_prime_UTR | 45.0% | |
!!! | TGTAGCTTTTTTCGCGGTAC+TGG | - | chr4_3:51140038-51140057 | Msa0645730:five_prime_UTR | 45.0% |
GGACCAAAGAGAATCATCGG+AGG | + | chr4_3:51133168-51133187 | None:intergenic | 50.0% | |
GGGGTTTCCGAGATGATCAA+TGG | + | chr4_3:51133225-51133244 | None:intergenic | 50.0% | |
TCTTAACCCCTCGGTCACAA+GGG | + | chr4_3:51133437-51133456 | None:intergenic | 50.0% | |
ATCTTAACCCCTCGGTCACA+AGG | + | chr4_3:51133438-51133457 | None:intergenic | 50.0% | |
GACATGTGGTCAGTGTCGTA+TGG | - | chr4_3:51133876-51133895 | Msa0645730:CDS | 50.0% | |
GATCACGATACCGACACATC+TGG | - | chr4_3:51134255-51134274 | Msa0645730:intron | 50.0% | |
CGACACATCTGGCACTTCTT+TGG | - | chr4_3:51134266-51134285 | Msa0645730:intron | 50.0% | |
GATGGACAGCGAAAAGGTTC+AGG | - | chr4_3:51134563-51134582 | Msa0645730:intron | 50.0% | |
TTCAGGATGCCATGCTACTG+TGG | - | chr4_3:51134580-51134599 | Msa0645730:intron | 50.0% | |
TGCTGTAACCAATGGTGTGC+AGG | - | chr4_3:51134710-51134729 | Msa0645730:intron | 50.0% | |
GTAACCAATGGTGTGCAGGT+AGG | - | chr4_3:51134714-51134733 | Msa0645730:intron | 50.0% | |
ATCCACTGCAATTTCGTCGC+CGG | + | chr4_3:51135396-51135415 | None:intergenic | 50.0% | |
GCTCTGCAACAGCAATTAGC+CGG | - | chr4_3:51136845-51136864 | Msa0645730:intron | 50.0% | |
! | AGCGGTGGTGCTTCCAATTT+TGG | - | chr4_3:51136887-51136906 | Msa0645730:intron | 50.0% |
! | TTAGCCGGAAGCATGACTGT+TGG | - | chr4_3:51136944-51136963 | Msa0645730:intron | 50.0% |
GATGCCAACAGTCATGCTTC+CGG | + | chr4_3:51136951-51136970 | None:intergenic | 50.0% | |
! | GGAAGCATGACTGTTGGCAT+CGG | - | chr4_3:51136950-51136969 | Msa0645730:intron | 50.0% |
!! | AACAAACCAACTTGCTGCCC+CGG | + | chr4_3:51137259-51137278 | None:intergenic | 50.0% |
TCTGCAGGACAATCACTGCA+AGG | - | chr4_3:51137307-51137326 | Msa0645730:intron | 50.0% | |
CAAGGAACACAACAAGCCAG+TGG | - | chr4_3:51137325-51137344 | Msa0645730:intron | 50.0% | |
GTCAGGAGCTGTACTTAGGA+AGG | + | chr4_3:51138035-51138054 | None:intergenic | 50.0% | |
ACCTTGCAGTCAGATGTGGA+AGG | - | chr4_3:51138072-51138091 | Msa0645730:intron | 50.0% | |
TCCTTCCACATCTGACTGCA+AGG | + | chr4_3:51138076-51138095 | None:intergenic | 50.0% | |
! | CGAGTGTTGTTGACAGTAGG+TGG | + | chr4_3:51138540-51138559 | None:intergenic | 50.0% |
! | GTCCGAGTGTTGTTGACAGT+AGG | + | chr4_3:51138543-51138562 | None:intergenic | 50.0% |
GGAAGCCTACTTATCCTGAC+TGG | - | chr4_3:51138616-51138635 | Msa0645730:CDS | 50.0% | |
! | TCTTTTCCTGGAGTTCCTGG+AGG | - | chr4_3:51139117-51139136 | Msa0645730:intron | 50.0% |
ATTCTAGCAGACACGCCTGT+TGG | - | chr4_3:51139231-51139250 | Msa0645730:intron | 50.0% | |
GATTGGAGAGACAGGTACCT+TGG | - | chr4_3:51139330-51139349 | Msa0645730:intron | 50.0% | |
!! | AACAGCTGCTAGAGTTGGTG+TGG | - | chr4_3:51139434-51139453 | Msa0645730:intron | 50.0% |
!! | ACAGCTGCTAGAGTTGGTGT+GGG | - | chr4_3:51139435-51139454 | Msa0645730:intron | 50.0% |
!! | AGAGTTGGTGTGGGAACTGT+CGG | - | chr4_3:51139444-51139463 | Msa0645730:intron | 50.0% |
!! | GCTTTGGGAGCAATGGCATT+AGG | - | chr4_3:51139468-51139487 | Msa0645730:intron | 50.0% |
GCAATGGCATTAGGAGCTAC+AGG | - | chr4_3:51139477-51139496 | Msa0645730:intron | 50.0% | |
TACAGGTCCTGCTGCAATTG+CGG | - | chr4_3:51139494-51139513 | Msa0645730:intron | 50.0% | |
GTTAATCCCGCAATTGCAGC+AGG | + | chr4_3:51139504-51139523 | None:intergenic | 50.0% | |
GGATTAACTGCTGCTGCAGT+AGG | - | chr4_3:51139516-51139535 | Msa0645730:intron | 50.0% | |
! | TTGCGGAGCATCTTTAGCCA+TGG | + | chr4_3:51139577-51139596 | None:intergenic | 50.0% |
CCGCAAGCTGCAAATAACCT+TGG | - | chr4_3:51139591-51139610 | Msa0645730:intron | 50.0% | |
!! | GCTTACCGTTGCTGACTTGA+AGG | + | chr4_3:51139649-51139668 | None:intergenic | 50.0% |
CAGCAACGGTAAGCAAACGA+TGG | - | chr4_3:51139655-51139674 | Msa0645730:intron | 50.0% | |
CAGCCTGTCTCAGCTAGAAA+TGG | + | chr4_3:51139805-51139824 | None:intergenic | 50.0% | |
!! | CATTTCTAGCTGAGACAGGC+TGG | - | chr4_3:51139803-51139822 | Msa0645730:CDS | 50.0% |
AAACCCCACCCCTTCCTTCA+AGG | - | chr4_3:51133238-51133257 | Msa0645730:intron | 55.0% | |
TGACCTTGAAGGAAGGGGTG+GGG | + | chr4_3:51133244-51133263 | None:intergenic | 55.0% | |
GTGACCTTGAAGGAAGGGGT+GGG | + | chr4_3:51133245-51133264 | None:intergenic | 55.0% | |
AGTGACCTTGAAGGAAGGGG+TGG | + | chr4_3:51133246-51133265 | None:intergenic | 55.0% | |
ATCCCAGCTGGAACGGTCTT+TGG | - | chr4_3:51133362-51133381 | Msa0645730:CDS | 55.0% | |
GACCAAAGACCGTTCCAGCT+GGG | + | chr4_3:51133367-51133386 | None:intergenic | 55.0% | |
TGACCAAAGACCGTTCCAGC+TGG | + | chr4_3:51133368-51133387 | None:intergenic | 55.0% | |
AGTCCTTTCCCTTGTGACCG+AGG | - | chr4_3:51133426-51133445 | Msa0645730:CDS | 55.0% | |
GTCCTTTCCCTTGTGACCGA+GGG | - | chr4_3:51133427-51133446 | Msa0645730:CDS | 55.0% | |
TCCTTTCCCTTGTGACCGAG+GGG | - | chr4_3:51133428-51133447 | Msa0645730:CDS | 55.0% | |
CTCTCCTACCTGCACACCAT+TGG | + | chr4_3:51134721-51134740 | None:intergenic | 55.0% | |
GTTGAAGAAGAAGTCGCCGG+TGG | - | chr4_3:51135313-51135332 | Msa0645730:intron | 55.0% | |
AAGAAGAAGTCGCCGGTGGT+GGG | - | chr4_3:51135317-51135336 | Msa0645730:intron | 55.0% | |
! | AGTACCGGAGAAGAACTCGC+CGG | - | chr4_3:51135344-51135363 | Msa0645730:intron | 55.0% |
AAATCGTCCAATCCCACCGC+CGG | + | chr4_3:51135366-51135385 | None:intergenic | 55.0% | |
TTCCGGCGACGAAATTGCAG+TGG | - | chr4_3:51135391-51135410 | Msa0645730:intron | 55.0% | |
! | TGAATCTGACTTTGGCGGGC+AGG | + | chr4_3:51135938-51135957 | None:intergenic | 55.0% |
CTGCAACAGCAATTAGCCGG+AGG | - | chr4_3:51136848-51136867 | Msa0645730:intron | 55.0% | |
! | CAGCAATTAGCCGGAGGCAT+CGG | - | chr4_3:51136854-51136873 | Msa0645730:intron | 55.0% |
!! | CTGTTGGCATCGGTGTTAGC+TGG | - | chr4_3:51136960-51136979 | Msa0645730:intron | 55.0% |
!! | TCGGTGTTAGCTGGACAGAG+TGG | - | chr4_3:51136969-51136988 | Msa0645730:intron | 55.0% |
GCACCAGACAACATGGGGAA+GGG | + | chr4_3:51136996-51137015 | None:intergenic | 55.0% | |
TTCCCCATGTTGTCTGGTGC+CGG | - | chr4_3:51136996-51137015 | Msa0645730:intron | 55.0% | |
ACAACAAGCCAGTGGGACGA+TGG | - | chr4_3:51137333-51137352 | Msa0645730:intron | 55.0% | |
CAACAAGCCAGTGGGACGAT+GGG | - | chr4_3:51137334-51137353 | Msa0645730:intron | 55.0% | |
AACAAGCCAGTGGGACGATG+GGG | - | chr4_3:51137335-51137354 | Msa0645730:intron | 55.0% | |
TGTGAGAGCTGCAGTTGCTG+AGG | + | chr4_3:51137409-51137428 | None:intergenic | 55.0% | |
GGGCACTTCACTCCCTGTTA+AGG | - | chr4_3:51137981-51138000 | Msa0645730:intron | 55.0% | |
! | CCTTTTCCTCCAGGAACTCC+AGG | + | chr4_3:51139126-51139145 | None:intergenic | 55.0% |
CCTGGAGTTCCTGGAGGAAA+AGG | - | chr4_3:51139123-51139142 | Msa0645730:intron | 55.0% | |
! | CAGCCCTTACCTTTTCCTCC+AGG | + | chr4_3:51139135-51139154 | None:intergenic | 55.0% |
GCTGCAGTTGCTCTATCAGC+TGG | - | chr4_3:51139405-51139424 | Msa0645730:intron | 55.0% | |
! | TGTGGGAACTGTCGGTGCTT+TGG | - | chr4_3:51139452-51139471 | Msa0645730:intron | 55.0% |
! | GTGGGAACTGTCGGTGCTTT+GGG | - | chr4_3:51139453-51139472 | Msa0645730:intron | 55.0% |
!! | TGTCGGTGCTTTGGGAGCAA+TGG | - | chr4_3:51139461-51139480 | Msa0645730:intron | 55.0% |
ACAGGTCCTGCTGCAATTGC+GGG | - | chr4_3:51139495-51139514 | Msa0645730:intron | 55.0% | |
ACCCCTCGGTCACAAGGGAA+AGG | + | chr4_3:51133432-51133451 | None:intergenic | 60.0% | |
GAAGAAGAAGTCGCCGGTGG+TGG | - | chr4_3:51135316-51135335 | Msa0645730:intron | 60.0% | |
GGCGGTGGGATTGGACGATT+TGG | - | chr4_3:51135365-51135384 | Msa0645730:intron | 60.0% | |
ATGGCCTCTGGGTCCCAAAG+TGG | - | chr4_3:51135435-51135454 | Msa0645730:intron | 60.0% | |
!! | AGGACCACTTTGGGACCCAG+AGG | + | chr4_3:51135442-51135461 | None:intergenic | 60.0% |
GGGTCCCAAAGTGGTCCTTC+TGG | - | chr4_3:51135444-51135463 | Msa0645730:intron | 60.0% | |
CAGAAGCGGCAGCTGACAAC+AGG | - | chr4_3:51136533-51136552 | Msa0645730:intron | 60.0% | |
GATGCGAACACCGATGCCTC+CGG | + | chr4_3:51136867-51136886 | None:intergenic | 60.0% | |
!! | GGCATCGGTGTTCGCATCAG+CGG | - | chr4_3:51136869-51136888 | Msa0645730:intron | 60.0% |
! | ATCGGTGTTCGCATCAGCGG+TGG | - | chr4_3:51136872-51136891 | Msa0645730:intron | 60.0% |
GGTCCCTTCCCCATGTTGTC+TGG | - | chr4_3:51136990-51137009 | Msa0645730:intron | 60.0% | |
GGCACCAGACAACATGGGGA+AGG | + | chr4_3:51136997-51137016 | None:intergenic | 60.0% | |
CACCGGCACCAGACAACATG+GGG | + | chr4_3:51137001-51137020 | None:intergenic | 60.0% | |
! | GCACCGGCACCAGACAACAT+GGG | + | chr4_3:51137002-51137021 | None:intergenic | 60.0% |
! | TGCACCGGCACCAGACAACA+TGG | + | chr4_3:51137003-51137022 | None:intergenic | 60.0% |
GCAACTGCAGCTCTCACAGC+AGG | - | chr4_3:51137411-51137430 | Msa0645730:intron | 60.0% | |
TGCTGCAGTAGGTGCAGCAG+TGG | - | chr4_3:51139527-51139546 | Msa0645730:intron | 60.0% | |
GCAGTAGGTGCAGCAGTGGT+AGG | - | chr4_3:51139531-51139550 | Msa0645730:intron | 60.0% | |
GTAGGTGCAGCAGTGGTAGG+TGG | - | chr4_3:51139534-51139553 | Msa0645730:intron | 60.0% | |
!! | AAGAAGTCGCCGGTGGTGGG+AGG | - | chr4_3:51135320-51135339 | Msa0645730:intron | 65.0% |
!! | AGAAGTCGCCGGTGGTGGGA+GGG | - | chr4_3:51135321-51135340 | Msa0645730:intron | 65.0% |
ACCGGAGAAGAACTCGCCGG+CGG | - | chr4_3:51135347-51135366 | Msa0645730:intron | 65.0% | |
ACCGCCGGCGAGTTCTTCTC+CGG | + | chr4_3:51135351-51135370 | None:intergenic | 65.0% | |
GAGAAGAACTCGCCGGCGGT+GGG | - | chr4_3:51135351-51135370 | Msa0645730:intron | 65.0% | |
GTGTAGCCGGGGCAGCAAGT+TGG | - | chr4_3:51137250-51137269 | Msa0645730:intron | 65.0% | |
GGATGACCCCATCGTCCCAC+TGG | + | chr4_3:51137344-51137363 | None:intergenic | 65.0% | |
CCGGTACTCCCTCCCACCAC+CGG | + | chr4_3:51135332-51135351 | None:intergenic | 70.0% | |
!! | CCGGTGGTGGGAGGGAGTAC+CGG | - | chr4_3:51135329-51135348 | Msa0645730:intron | 70.0% |
GGAGAAGAACTCGCCGGCGG+TGG | - | chr4_3:51135350-51135369 | Msa0645730:intron | 70.0% | |
GAACTCGCCGGCGGTGGGAT+TGG | - | chr4_3:51135356-51135375 | Msa0645730:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_3 | gene | 51132932 | 51140073 | 51132932 | ID=Msa0645730;Name=Msa0645730 |
chr4_3 | mRNA | 51132932 | 51140073 | 51132932 | ID=Msa0645730-mRNA-1;Parent=Msa0645730;Name=Msa0645730-mRNA-1;_AED=0.27;_eAED=0.27;_QI=124|0.1|0.09|0.18|1|1|11|0|708 |
chr4_3 | exon | 51132932 | 51132973 | 51132932 | ID=Msa0645730-mRNA-1:exon:12354;Parent=Msa0645730-mRNA-1 |
chr4_3 | exon | 51133343 | 51133782 | 51133343 | ID=Msa0645730-mRNA-1:exon:12353;Parent=Msa0645730-mRNA-1 |
chr4_3 | exon | 51133861 | 51133914 | 51133861 | ID=Msa0645730-mRNA-1:exon:12352;Parent=Msa0645730-mRNA-1 |
chr4_3 | exon | 51134879 | 51134924 | 51134879 | ID=Msa0645730-mRNA-1:exon:12351;Parent=Msa0645730-mRNA-1 |
chr4_3 | exon | 51135003 | 51135071 | 51135003 | ID=Msa0645730-mRNA-1:exon:12350;Parent=Msa0645730-mRNA-1 |
chr4_3 | exon | 51135555 | 51135749 | 51135555 | ID=Msa0645730-mRNA-1:exon:12349;Parent=Msa0645730-mRNA-1 |
chr4_3 | exon | 51136002 | 51136160 | 51136002 | ID=Msa0645730-mRNA-1:exon:12348;Parent=Msa0645730-mRNA-1 |
chr4_3 | exon | 51137005 | 51137103 | 51137005 | ID=Msa0645730-mRNA-1:exon:12347;Parent=Msa0645730-mRNA-1 |
chr4_3 | exon | 51137596 | 51137691 | 51137596 | ID=Msa0645730-mRNA-1:exon:12346;Parent=Msa0645730-mRNA-1 |
chr4_3 | exon | 51138274 | 51138996 | 51138274 | ID=Msa0645730-mRNA-1:exon:12345;Parent=Msa0645730-mRNA-1 |
chr4_3 | exon | 51139746 | 51140073 | 51139746 | ID=Msa0645730-mRNA-1:exon:12344;Parent=Msa0645730-mRNA-1 |
chr4_3 | five_prime_UTR | 51139950 | 51140073 | 51139950 | ID=Msa0645730-mRNA-1:five_prime_utr;Parent=Msa0645730-mRNA-1 |
chr4_3 | CDS | 51139746 | 51139949 | 51139746 | ID=Msa0645730-mRNA-1:cds;Parent=Msa0645730-mRNA-1 |
chr4_3 | CDS | 51138274 | 51138996 | 51138274 | ID=Msa0645730-mRNA-1:cds;Parent=Msa0645730-mRNA-1 |
chr4_3 | CDS | 51137596 | 51137691 | 51137596 | ID=Msa0645730-mRNA-1:cds;Parent=Msa0645730-mRNA-1 |
chr4_3 | CDS | 51137005 | 51137103 | 51137005 | ID=Msa0645730-mRNA-1:cds;Parent=Msa0645730-mRNA-1 |
chr4_3 | CDS | 51136002 | 51136160 | 51136002 | ID=Msa0645730-mRNA-1:cds;Parent=Msa0645730-mRNA-1 |
chr4_3 | CDS | 51135555 | 51135749 | 51135555 | ID=Msa0645730-mRNA-1:cds;Parent=Msa0645730-mRNA-1 |
chr4_3 | CDS | 51135003 | 51135071 | 51135003 | ID=Msa0645730-mRNA-1:cds;Parent=Msa0645730-mRNA-1 |
chr4_3 | CDS | 51134879 | 51134924 | 51134879 | ID=Msa0645730-mRNA-1:cds;Parent=Msa0645730-mRNA-1 |
chr4_3 | CDS | 51133861 | 51133914 | 51133861 | ID=Msa0645730-mRNA-1:cds;Parent=Msa0645730-mRNA-1 |
chr4_3 | CDS | 51133343 | 51133782 | 51133343 | ID=Msa0645730-mRNA-1:cds;Parent=Msa0645730-mRNA-1 |
chr4_3 | CDS | 51132932 | 51132973 | 51132932 | ID=Msa0645730-mRNA-1:cds;Parent=Msa0645730-mRNA-1 |
Gene Sequence |
Protein sequence |