AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0052300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0052300 MtrunA17_Chr1g0152641 93.556 869 16 3 482 1312 369 1235 0.0 1679
Msa0052300 MtrunA17_Chr1g0152641 83.105 438 42 1 1 438 1 406 0.0 673
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0052300 AT1G27750.1 39.443 431 212 11 427 844 280 674 1.38e-79 286
Msa0052300 AT1G27750.1 37.173 382 186 7 34 401 1 342 7.81e-64 238
Msa0052300 AT1G27750.1 59.322 59 22 2 1254 1312 960 1016 6.92e-13 74.3

Find 357 sgRNAs with CRISPR-Local

Find 911 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCAAAACACACTGATTAAT+TGG 0.118102 1_2:-6516883 None:intergenic
GGACTGCCATTAAAATTATT+TGG 0.169076 1_2:-6520677 None:intergenic
CGGGATTATCTTGCATATTC+AGG 0.209808 1_2:-6513863 None:intergenic
TGAAACCTAATATGGCTTTC+AGG 0.210970 1_2:-6518492 None:intergenic
CGATTCTCAGCATTCATTCT+AGG 0.226599 1_2:-6520253 None:intergenic
TGTGTAACCTGAATTCTATT+TGG 0.228137 1_2:-6519439 None:intergenic
GGATGAGGAGGTGGCATTTC+AGG 0.246362 1_2:-6520821 None:intergenic
GGTTTCCTTCCTCCAACTTC+TGG 0.249117 1_2:-6520343 None:intergenic
ATGAGAGGAACAAGAATATA+TGG 0.254780 1_2:+6516364 Msa0052300:CDS
TCTCTATTTGAAACCTAATA+TGG 0.258138 1_2:-6518500 None:intergenic
GACATCATTTCCCTCAAATA+AGG 0.259090 1_2:-6513817 None:intergenic
TAGATATTGTTGCTGCTTCT+AGG 0.262723 1_2:+6518436 Msa0052300:CDS
ATCAAGGAAAGTAGTTTATA+AGG 0.265694 1_2:+6518770 Msa0052300:CDS
CTTTGAGTGTGCGTTGCTTA+TGG 0.283920 1_2:+6518818 Msa0052300:CDS
ACATGCCTGAAAGCCATATT+AGG 0.285770 1_2:+6518487 Msa0052300:CDS
AAACTACTTTCCTTGATTCA+TGG 0.286044 1_2:-6518764 None:intergenic
AGAATTGCTTGCAGCTTGTT+TGG 0.287198 1_2:+6513998 Msa0052300:CDS
TGCAATACTGATGTAGTTTC+CGG 0.293300 1_2:-6517787 None:intergenic
AGTATTTGCAACCTTGCTAT+TGG 0.294882 1_2:+6519284 Msa0052300:CDS
GCACAAAACAATTTGACTTT+TGG 0.299113 1_2:-6518391 None:intergenic
CTTACAACATTAACTGTTCC+TGG 0.300190 1_2:-6518930 None:intergenic
GTTACTGAAACAGGTATAAA+AGG 0.303148 1_2:-6520698 None:intergenic
TCAGTATTGCAAGGAATTCT+TGG 0.304409 1_2:+6517799 Msa0052300:CDS
ATTCCATATTGACTGGTTCT+TGG 0.304749 1_2:-6520946 None:intergenic
CCCAATTAATCAGTGTGTTT+TGG 0.306483 1_2:+6516882 Msa0052300:CDS
TGGGGATCCCATTGGCCATT+TGG 0.306521 1_2:-6520605 None:intergenic
TGATGAAGCAGTTCACCTTT+TGG 0.316077 1_2:+6514103 Msa0052300:CDS
TCCTTGCCGTGTAAAATTCA+TGG 0.316278 1_2:+6518635 Msa0052300:CDS
AGTAGTTATAGCCCACATTT+TGG 0.319325 1_2:+6518906 Msa0052300:CDS
ATAGAATCGTTACATGATTT+AGG 0.319970 1_2:-6514143 None:intergenic
GCAGGTTCGCACTTTGATAA+TGG 0.322912 1_2:+6518087 Msa0052300:intron
CAAGCTGCAAGCAATTCTTT+TGG 0.324769 1_2:-6513993 None:intergenic
CATGGCAGTGGTGGTGGTGG+TGG 0.326118 1_2:-6511781 None:intergenic
GCGTTTAGTCATGTCTAATT+TGG 0.326423 1_2:-6521332 None:intergenic
ATGACGGAGGCAGCTTCTTC+AGG 0.326720 1_2:-6518852 None:intergenic
TTAGAACAGCAGTAGACTTT+AGG 0.328999 1_2:+6518211 Msa0052300:CDS
CCATTTGGAGGAACATAAAC+AGG 0.332353 1_2:-6520590 None:intergenic
ACCTTGAGGTCCAGGTGAGC+AGG 0.334241 1_2:-6518993 None:intergenic
CTGTCTTCACTTGTGGAAGA+TGG 0.345349 1_2:-6522769 None:intergenic
GCTCAAGGAGGATGCTGATT+TGG 0.345568 1_2:+6516849 Msa0052300:CDS
TTTGCCCGCCCCTGCTCACC+TGG 0.346260 1_2:+6518983 Msa0052300:CDS
CAATATGCATAACTGGAGTT+TGG 0.346438 1_2:+6513623 Msa0052300:CDS
GGCAGCGGAGGAGGAGGAGG+TGG 0.350860 1_2:-6520920 None:intergenic
GCAGCTTGTTTGGAACTCTT+AGG 0.356964 1_2:+6514008 Msa0052300:CDS
GCTCATCATCTGTGAGGAAC+TGG 0.357067 1_2:-6519256 None:intergenic
TCCGAGGAACTTGAAAATAT+TGG 0.357853 1_2:+6517928 Msa0052300:CDS
CTTGTTCGACTGCTGTCGGC+AGG 0.360408 1_2:-6519062 None:intergenic
TGTAAGTGGGCATGGTTATA+TGG 0.362725 1_2:+6518947 Msa0052300:CDS
TGTCCAAGAACCAGTCAATA+TGG 0.363409 1_2:+6520943 Msa0052300:CDS
TTTGAATCGCATCGGAGATA+TGG 0.363635 1_2:-6514220 None:intergenic
ACCAGTCAATATGGAATGTT+CGG 0.365855 1_2:+6520952 Msa0052300:CDS
TCTGGCATCTCTCTTGAATC+AGG 0.366858 1_2:-6520325 None:intergenic
TGGAGCTGTCAGCAATGTTC+TGG 0.367185 1_2:+6518329 Msa0052300:CDS
ACACGGCAAGGAAAATTTCC+AGG 0.384319 1_2:-6518624 None:intergenic
GCATTACAACAGTTTGGTAT+TGG 0.386020 1_2:-6520655 None:intergenic
CCAGTCAATATGGAATGTTC+GGG 0.387918 1_2:+6520953 Msa0052300:CDS
TCATTATCAATATGCATAAC+TGG 0.389024 1_2:+6513616 Msa0052300:CDS
AACTCCACTTGCTCAAATAC+AGG 0.389251 1_2:+6520718 Msa0052300:CDS
TATAACTACTTCTTTCTCTT+CGG 0.390507 1_2:-6518893 None:intergenic
AGTTGAGTACAGAAGGATAA+TGG 0.390614 1_2:+6518575 Msa0052300:CDS
GGAGAACCAGGTGGAGGAGG+TGG 0.392145 1_2:-6520896 None:intergenic
TTGGAAATGTTTCCAGTCAA+TGG 0.392647 1_2:+6518724 Msa0052300:CDS
AGCGGAGGAGGAGGAGGTGG+AGG 0.392797 1_2:-6520917 None:intergenic
CTCATCCTTGGCCCATTGAC+TGG 0.394751 1_2:-6518736 None:intergenic
TGGATGTGGGACTTGGTAGT+AGG 0.395415 1_2:+6518655 Msa0052300:CDS
TATTTGGCATTACAACAGTT+TGG 0.396919 1_2:-6520661 None:intergenic
CCAACATCAGCTGTAATTAG+AGG 0.399422 1_2:+6513750 Msa0052300:CDS
TTTAGGAGTAATTCATTTGA+TGG 0.402515 1_2:+6518228 Msa0052300:CDS
CAATCTCTACACAGCAATCC+AGG 0.404185 1_2:+6520169 Msa0052300:intron
ATTGGTGAAAGATCACAAAA+AGG 0.404198 1_2:+6517946 Msa0052300:CDS
CACCTCTGTCTCAATCAAAC+TGG 0.404936 1_2:+6520296 Msa0052300:CDS
TTCCAGTCATATAATTATCA+TGG 0.412885 1_2:-6519154 None:intergenic
TTGCTGCTTCTAGGCAGCTA+TGG 0.414015 1_2:+6518445 Msa0052300:CDS
TCTTGGACAGGCAGCGGAGG+AGG 0.414387 1_2:-6520929 None:intergenic
ACAGGCAGCGGAGGAGGAGG+AGG 0.414418 1_2:-6520923 None:intergenic
AGAAAGTGAGAGCTAGTTTC+CGG 0.416983 1_2:-6511870 None:intergenic
GGAGGTCATGGCAGTGGTGG+TGG 0.418324 1_2:-6511787 None:intergenic
GCAAGTGGAGTTACTGAAAC+AGG 0.422828 1_2:-6520707 None:intergenic
TGAGAGCTAGTTTCCGGTTG+TGG 0.423031 1_2:-6511864 None:intergenic
AAAGAGCTGTTTGCTTATGC+TGG 0.423377 1_2:+6514241 Msa0052300:CDS
GGAGGAATCTGCTGGTTATA+CGG 0.423902 1_2:-6520755 None:intergenic
CCTGTTTATGTTCCTCCAAA+TGG 0.424400 1_2:+6520590 Msa0052300:CDS
TGTCTTCACTTGTGGAAGAT+GGG 0.425821 1_2:-6522768 None:intergenic
TGGACAGGCAGCGGAGGAGG+AGG 0.427001 1_2:-6520926 None:intergenic
GAACCAGGTGGAGGAGGTGG+AGG 0.428076 1_2:-6520893 None:intergenic
ATGCATATTGATAATGACTT+TGG 0.428778 1_2:-6513610 None:intergenic
TGCTGCTTCTAGGCAGCTAT+GGG 0.429660 1_2:+6518446 Msa0052300:CDS
AGGAGGTGGCAAGGATGATA+AGG 0.430608 1_2:-6520795 None:intergenic
GGATGTGGGACTTGGTAGTA+GGG 0.431978 1_2:+6518656 Msa0052300:CDS
GATTCTCAGCATTCATTCTA+GGG 0.434386 1_2:-6520252 None:intergenic
TGGTGACATAAAACGATGAT+TGG 0.434920 1_2:-6518358 None:intergenic
TTGAGCTCATTATCTACAAC+TGG 0.436565 1_2:-6516832 None:intergenic
CCTCATGCTCGAGCTTTACA+TGG 0.436914 1_2:+6519035 Msa0052300:CDS
ATTCGTGAAGATTGAAGAAT+CGG 0.439710 1_2:-6517881 None:intergenic
TTTAGTCATGTCTAATTTGG+TGG 0.445286 1_2:-6521329 None:intergenic
GAGGTCCAGGTGAGCAGGGG+CGG 0.445937 1_2:-6518988 None:intergenic
AGGACCCCTCACTGCGGAAG+TGG 0.446266 1_2:+6517716 Msa0052300:CDS
CTCAAGGTCAGCAACTCTGC+TGG 0.447124 1_2:+6519008 Msa0052300:CDS
GATTTAATTCCTCGATATGC+TGG 0.447516 1_2:+6513558 Msa0052300:CDS
GGAGGATGTGGATGAGGAGG+TGG 0.447643 1_2:-6520830 None:intergenic
GGAGGAGGTGGAGGAGAACC+AGG 0.447790 1_2:-6520908 None:intergenic
TGACGGAGGCAGCTTCTTCA+GGG 0.449440 1_2:-6518851 None:intergenic
ACCGTCGCAATCGCCACAAC+CGG 0.453422 1_2:+6511851 Msa0052300:CDS
ATATGGCTTTCAGGCATGTC+AGG 0.453605 1_2:-6518483 None:intergenic
TCCGTGCATTATGTATACTT+AGG 0.456018 1_2:+6513955 Msa0052300:CDS
CCGTGCATTATGTATACTTA+GGG 0.456433 1_2:+6513956 Msa0052300:CDS
CTCCATGATAATTATATGAC+TGG 0.461826 1_2:+6519152 Msa0052300:CDS
AAGAATCTGCGTGGTTGTCC+AGG 0.462528 1_2:+6519407 Msa0052300:CDS
TTGTGGAAGATGGGATTAAA+CGG 0.462840 1_2:-6522759 None:intergenic
GGAGGAGAACCAGGTGGAGG+AGG 0.463281 1_2:-6520899 None:intergenic
TCAAGGAAAGTAGTTTATAA+GGG 0.463944 1_2:+6518771 Msa0052300:CDS
TAACTGATTGTTTATTCCAT+GGG 0.465945 1_2:-6520624 None:intergenic
AGTTGCTGACCTTGAGGTCC+AGG 0.466436 1_2:-6519001 None:intergenic
ACAGTTTGGTATTGGTTCAC+AGG 0.468977 1_2:-6520647 None:intergenic
TGGAAATGTTTCCAGTCAAT+GGG 0.469071 1_2:+6518725 Msa0052300:CDS
AGAAAATTCTGATCAAGATC+AGG 0.469122 1_2:-6512029 None:intergenic
ATAGAAACTATGTGATTCCT+AGG 0.469211 1_2:+6517902 Msa0052300:CDS
GTTGAATGTAGTAATGTTGA+CGG 0.469298 1_2:+6519368 Msa0052300:CDS
GTTCCTCCACCTCCTCCACC+TGG 0.470971 1_2:+6520890 Msa0052300:CDS
TCTAGTTCTCATATTTATGT+TGG 0.471081 1_2:+6518705 Msa0052300:CDS
AGGTCCAGGTGAGCAGGGGC+GGG 0.471251 1_2:-6518987 None:intergenic
AGGTGAGCAGGGGCGGGCAA+AGG 0.471496 1_2:-6518981 None:intergenic
TCAAGTTCCTCGGAGATCCT+AGG 0.472209 1_2:-6517919 None:intergenic
AGGTTTCAAATAGAGAGGTT+TGG 0.472541 1_2:+6518507 Msa0052300:CDS
TGAGAAGGAGGATGTGGATG+AGG 0.472640 1_2:-6520836 None:intergenic
CTCGCTCACTAATGCTTCAC+CGG 0.475487 1_2:+6517768 Msa0052300:CDS
TTTATATTCTTCCCATCGAA+TGG 0.476813 1_2:+6518543 Msa0052300:CDS
CCTCTAATTACAGCTGATGT+TGG 0.476989 1_2:-6513750 None:intergenic
GGCATTTCAGGCTGAGGAGG+TGG 0.477115 1_2:-6520809 None:intergenic
GTAACTGATTGTTTATTCCA+TGG 0.480937 1_2:-6520625 None:intergenic
GACTGAATTTGTTGTGGTGG+TGG 0.482115 1_2:-6520551 None:intergenic
CCATTGGAGTTATTTGGAAA+CGG 0.482552 1_2:-6511683 None:intergenic
TCAAGAGAGATGCCAGAAGT+TGG 0.484043 1_2:+6520331 Msa0052300:CDS
GGTCATGGCAGTGGTGGTGG+TGG 0.484721 1_2:-6511784 None:intergenic
ATATTGACTGGTTCTTGGAC+AGG 0.484939 1_2:-6520941 None:intergenic
CCAAAACACACTGATTAATT+GGG 0.485325 1_2:-6516882 None:intergenic
AGCATATCGAGGAATTAAAT+CGG 0.487296 1_2:-6513556 None:intergenic
GGCATTGACTAGTAAGGAAG+AGG 0.488253 1_2:+6513644 Msa0052300:CDS
TCAGGTAGAGGTGGCTGAGA+AGG 0.488262 1_2:-6520851 None:intergenic
GATGCGGCTTCCAAAGCTGT+TGG 0.489612 1_2:-6513588 None:intergenic
TACCCTTCTGTCTTCACTTG+TGG 0.490001 1_2:-6522776 None:intergenic
GAGTTTGGCATTGACTAGTA+AGG 0.490812 1_2:+6513638 Msa0052300:CDS
TCTTGTTCTGAGCAAGGAAT+GGG 0.492083 1_2:+6522968 Msa0052300:CDS
TGGTCACTGTCCAACAGCTT+TGG 0.492119 1_2:+6513578 Msa0052300:CDS
AGAGTCCACTTCCGCAGTGA+GGG 0.492249 1_2:-6517721 None:intergenic
TCCAAATAACTCCAATGGAG+GGG 0.493073 1_2:+6511688 Msa0052300:exon
GGAGGTGGAGGAACCAAGGG+GGG 0.493285 1_2:-6520881 None:intergenic
TGCTGGTTATACGGTTGCAT+TGG 0.493720 1_2:-6520746 None:intergenic
TGTTCCTCCAAATGGCCAAT+GGG 0.493777 1_2:+6520598 Msa0052300:CDS
GGAGGAGGTGGAGGAACCAA+GGG 0.493778 1_2:-6520884 None:intergenic
AACCTTGCTATTGGAAACTC+TGG 0.496041 1_2:+6519293 Msa0052300:CDS
AAGGGTGGTGGTACAATTGA+GGG 0.497200 1_2:-6520776 None:intergenic
TAAGGGTGGTGGTACAATTG+AGG 0.497304 1_2:-6520777 None:intergenic
GGAACAGCATTCTGATTCCC+TGG 0.498113 1_2:-6520187 None:intergenic
AAAGCTCGACACTGTGCACC+TGG 0.500196 1_2:+6518606 Msa0052300:CDS
GGAGAGTGGTGAGTTTGTTA+CGG 0.500670 1_2:-6511760 None:intergenic
ATTGATAATGACTTTGGATG+CGG 0.503938 1_2:-6513604 None:intergenic
TTATTCCATGGGGATCCCAT+TGG 0.504735 1_2:-6520613 None:intergenic
GATAAATGATCATAACCATC+AGG 0.505244 1_2:-6520364 None:intergenic
CCCTGCTCACCTGGACCTCA+AGG 0.505509 1_2:+6518992 Msa0052300:CDS
CATCATTTGCTCTACCCAAA+AGG 0.506800 1_2:-6514118 None:intergenic
ATCGGAGATATGGTTGTCAT+TGG 0.507376 1_2:-6514210 None:intergenic
CCTTGAGGTCCAGGTGAGCA+GGG 0.507405 1_2:-6518992 None:intergenic
GGCAGTGCAATGGCGGAGAT+CGG 0.507776 1_2:+6516322 Msa0052300:intron
GGTGGCTGAGAAGGAGGATG+TGG 0.507911 1_2:-6520842 None:intergenic
GGAGGTGGCAAGGATGATAA+GGG 0.509170 1_2:-6520794 None:intergenic
AGGTCTGTGGGCGTTGAGAA+AGG 0.509962 1_2:+6518120 Msa0052300:CDS
GGTGACATAAAACGATGATT+GGG 0.510137 1_2:-6518357 None:intergenic
TTGATAATGGAGGGGTATCA+AGG 0.510443 1_2:+6518100 Msa0052300:CDS
TTCAATTCAGAAAAGACCTC+GGG 0.511163 1_2:-6513882 None:intergenic
TATAATATTAATCAAAACAT+AGG 0.511615 1_2:+6519128 Msa0052300:CDS
TTGCTTTAGTTGAGTACAGA+AGG 0.512345 1_2:+6518568 Msa0052300:CDS
GGAACAGTTAATGTTGTAAG+TGG 0.512377 1_2:+6518933 Msa0052300:CDS
CCCGAACATTCCATATTGAC+TGG 0.512561 1_2:-6520953 None:intergenic
TGTTAGATGTTCCACACCTA+GGG 0.514051 1_2:+6518155 Msa0052300:CDS
ATGAGATTCTCCATGAATCA+AGG 0.515198 1_2:+6518754 Msa0052300:CDS
ACTGGTTCTTGGACAGGCAG+CGG 0.518144 1_2:-6520935 None:intergenic
ACTAAAGCAAATCCATTCGA+TGG 0.521176 1_2:-6518555 None:intergenic
TGGTTATGATCATTTATCAC+TGG 0.521982 1_2:+6520369 Msa0052300:CDS
GTTAATGTTGTAAGTGGGCA+TGG 0.522278 1_2:+6518939 Msa0052300:CDS
GGAAGGCATCAAAGAGATTG+AGG 0.522895 1_2:+6514169 Msa0052300:CDS
ATGTTCCTCCAAATGGCCAA+TGG 0.523209 1_2:+6520597 Msa0052300:CDS
TTCGCTTGTAACCTTCATAG+AGG 0.523556 1_2:-6511968 None:intergenic
TTCATGGAGAATCTCATCCT+TGG 0.523979 1_2:-6518748 None:intergenic
TGGAGGAGGTGGAGGAACCA+AGG 0.525420 1_2:-6520885 None:intergenic
ATTCTGATCAAGATCAGGTA+TGG 0.525681 1_2:-6512024 None:intergenic
GATGAATCTTGTTCTGAGCA+AGG 0.527478 1_2:+6522962 Msa0052300:CDS
GCAACAATATCTACAGCAGC+AGG 0.529464 1_2:-6518426 None:intergenic
ATCTTGTTCTGAGCAAGGAA+TGG 0.530445 1_2:+6522967 Msa0052300:CDS
CATTCTTGTTCGACTGCTGT+CGG 0.530579 1_2:-6519066 None:intergenic
TAAACCTGAAAACCGTGCTA+TGG 0.530588 1_2:+6520219 Msa0052300:CDS
CTTAGGCTCCACCACAAAAG+AGG 0.531128 1_2:+6514025 Msa0052300:CDS
TCCGGTTGTGGCGATTGCGA+CGG 0.532016 1_2:-6511852 None:intergenic
GGATCCCATTGGCCATTTGG+AGG 0.532445 1_2:-6520602 None:intergenic
AGGATGTTCGACGGAGGTCA+TGG 0.532696 1_2:-6511799 None:intergenic
CCGTGTAAAATTCATGGATG+TGG 0.532850 1_2:+6518641 Msa0052300:CDS
TCTTGAGACAACGGCGGAGT+AGG 0.534365 1_2:-6511903 None:intergenic
CATGCATACTCTGGAGCACA+TGG 0.538597 1_2:+6520518 Msa0052300:CDS
ATATGGGATTCAAATGATCC+AGG 0.538735 1_2:+6516381 Msa0052300:CDS
GGTGGAGGAGAACCAGGTGG+AGG 0.538781 1_2:-6520902 None:intergenic
GAGGAGGTGGAGGAACCAAG+GGG 0.539236 1_2:-6520883 None:intergenic
AGAGAGATGCCAGAAGTTGG+AGG 0.541099 1_2:+6520334 Msa0052300:CDS
GGTAGTAGGGGTGCAGTGAA+TGG 0.541975 1_2:+6518669 Msa0052300:CDS
CCGTTTCCAAATAACTCCAA+TGG 0.542175 1_2:+6511683 Msa0052300:exon
ACTGTTCCTGGACCAAAATG+TGG 0.542196 1_2:-6518918 None:intergenic
TTAGTCATGTCTAATTTGGT+GGG 0.542281 1_2:-6521328 None:intergenic
TTGTTCGACTGCTGTCGGCA+GGG 0.543735 1_2:-6519061 None:intergenic
GAGACAACGGCGGAGTAGGT+AGG 0.544305 1_2:-6511899 None:intergenic
ACATAAACAGGGCGGGTGAA+AGG 0.544648 1_2:-6520578 None:intergenic
GGTTGTGTCTCAGGTAGAGG+TGG 0.544798 1_2:-6520860 None:intergenic
AAATTCATGGATGTGGGACT+TGG 0.545243 1_2:+6518648 Msa0052300:CDS
AATTTGTTGTGGTGGTGGAA+TGG 0.545481 1_2:-6520546 None:intergenic
TGAGAGGAACAAGAATATAT+GGG 0.545922 1_2:+6516365 Msa0052300:CDS
CTCATCATCTGTGAGGAACT+GGG 0.546150 1_2:-6519255 None:intergenic
AGACAACGGCGGAGTAGGTA+GGG 0.547594 1_2:-6511898 None:intergenic
GGTAGAGGTGGCTGAGAAGG+AGG 0.549030 1_2:-6520848 None:intergenic
GCAATTCGAAACCTCTATGA+AGG 0.549036 1_2:+6511957 Msa0052300:CDS
TGGAGGAAGATTGTTTCTGA+AGG 0.550894 1_2:-6512004 None:intergenic
ATCATGTAACGATTCTATTG+AGG 0.551269 1_2:+6514148 Msa0052300:CDS
GGCATCAAAGAGATTGAGGT+TGG 0.551976 1_2:+6514173 Msa0052300:CDS
GTTCCCTGTATTTGAGCAAG+TGG 0.552530 1_2:-6520722 None:intergenic
AATTGTTATCCACAGAGTGT+TGG 0.552606 1_2:-6519219 None:intergenic
GAGTGGTGAGTTTGTTACGG+TGG 0.552609 1_2:-6511757 None:intergenic
TTCGACGGAGGTCATGGCAG+TGG 0.554697 1_2:-6511793 None:intergenic
GCAGTGAATGGTGTTGCAGT+TGG 0.555294 1_2:+6518681 Msa0052300:CDS
AATGTTCCACATGCATACTC+TGG 0.558674 1_2:+6520509 Msa0052300:CDS
GCTTCTAGGCAGCTATGGGT+AGG 0.560484 1_2:+6518450 Msa0052300:CDS
CACTGCATCTTCCTCACGCG+TGG 0.561946 1_2:-6519192 None:intergenic
GGTTGTGGCGATTGCGACGG+TGG 0.562189 1_2:-6511849 None:intergenic
TGCTTGTGTCAACCGTGCAA+TGG 0.563500 1_2:-6519318 None:intergenic
AGTTTCAAATGCAATACCAT+TGG 0.564003 1_2:-6513670 None:intergenic
AGGAGGTGGAGGAACCAAGG+GGG 0.564199 1_2:-6520882 None:intergenic
TGATGGCTTACAGAGTCCCT+AGG 0.566602 1_2:-6518171 None:intergenic
GGTGGCATTTCAGGCTGAGG+AGG 0.567538 1_2:-6520812 None:intergenic
TCTACTGCTGTTCTAACTGT+AGG 0.567594 1_2:-6518204 None:intergenic
TGTTGTGGTGGTGGAATGGA+AGG 0.570607 1_2:-6520542 None:intergenic
TTCAGGCTGAGGAGGTGGCA+AGG 0.570796 1_2:-6520804 None:intergenic
GATGACTGAATTTGTTGTGG+TGG 0.571692 1_2:-6520554 None:intergenic
AGATGCCAGAAGTTGGAGGA+AGG 0.572164 1_2:+6520338 Msa0052300:CDS
ATGTTAGATGTTCCACACCT+AGG 0.573238 1_2:+6518154 Msa0052300:CDS
CCAAATAACTCCAATGGAGG+GGG 0.574194 1_2:+6511689 Msa0052300:exon
GGCAAGGATGATAAGGGTGG+TGG 0.574411 1_2:-6520788 None:intergenic
TTCCAAATAACTCCAATGGA+GGG 0.575011 1_2:+6511687 Msa0052300:exon
CTGGCATCTCTCTTGAATCA+GGG 0.576031 1_2:-6520324 None:intergenic
TTTGTGCATGGAATTTCACT+AGG 0.576978 1_2:+6512258 Msa0052300:CDS
GTTCGCACTTTGATAATGGA+GGG 0.579237 1_2:+6518091 Msa0052300:CDS
CAGCAGAGTTGCTGACCTTG+AGG 0.579302 1_2:-6519007 None:intergenic
GACGGAGGTCATGGCAGTGG+TGG 0.579639 1_2:-6511790 None:intergenic
GTTTCTGTAATTGATTGCTG+TGG 0.580557 1_2:+6512309 Msa0052300:CDS
AGTGGAAGGAGCAAGTGAGA+AGG 0.581627 1_2:+6516915 Msa0052300:CDS
TTTCAATTCAGAAAAGACCT+CGG 0.581829 1_2:-6513883 None:intergenic
CTAAAGCAAATCCATTCGAT+GGG 0.582079 1_2:-6518554 None:intergenic
AGTTGTAGATAATGAGCTCA+AGG 0.582591 1_2:+6516834 Msa0052300:CDS
ATGGAGGAATCGTTTGTGCA+TGG 0.582833 1_2:+6512246 Msa0052300:CDS
AACCAGAGTTTCCAATAGCA+AGG 0.582905 1_2:-6519295 None:intergenic
GAAACTCTGGTTCCATTGCA+CGG 0.582971 1_2:+6519306 Msa0052300:CDS
AAGTGAGAAGGCGAAGAGGA+TGG 0.584005 1_2:+6516927 Msa0052300:CDS
ATATTAGGTTTCAAATAGAG+AGG 0.584199 1_2:+6518502 Msa0052300:CDS
GGTTCGCACTTTGATAATGG+AGG 0.586764 1_2:+6518090 Msa0052300:intron
GGAGGTGGCATTTCAGGCTG+AGG 0.587108 1_2:-6520815 None:intergenic
GCAGCTATGGGTAGGTTGTG+TGG 0.588471 1_2:+6518458 Msa0052300:CDS
CTTCCACAAGTGAAGACAGA+AGG 0.588817 1_2:+6522773 Msa0052300:CDS
GAAGGAGGATGTGGATGAGG+AGG 0.590166 1_2:-6520833 None:intergenic
TAGGTGTGGAACATCTAACA+TGG 0.590234 1_2:-6518152 None:intergenic
GGAGATGACTGAATTTGTTG+TGG 0.590494 1_2:-6520557 None:intergenic
TGATAACTCACTCTATGAGA+TGG 0.590864 1_2:-6521394 None:intergenic
ATGCACAAACGATTCCTCCA+TGG 0.591547 1_2:-6512244 None:intergenic
TGGAGGAACATAAACAGGGC+GGG 0.592018 1_2:-6520585 None:intergenic
GGAGACCAGTGTTTAACTGC+TGG 0.592290 1_2:+6522989 Msa0052300:CDS
TTGGCTGCACTTGAAGTGGA+AGG 0.592746 1_2:+6516901 Msa0052300:CDS
CCTCTGTCGAGGTCCTCTAG+TGG 0.592856 1_2:+6518309 Msa0052300:CDS
GATGCTGATTTGGAAGTGAA+TGG 0.593487 1_2:+6516859 Msa0052300:CDS
TTAGGCTCCACCACAAAAGA+GGG 0.593890 1_2:+6514026 Msa0052300:CDS
GAGTCCACTTCCGCAGTGAG+GGG 0.593964 1_2:-6517720 None:intergenic
TTTCCAAATAACTCCAATGG+AGG 0.595541 1_2:+6511686 Msa0052300:exon
AGGAACTGGGAGCTACTATG+AGG 0.596083 1_2:-6519242 None:intergenic
CTGTAGGTGAGAACATCTGA+TGG 0.596367 1_2:-6518188 None:intergenic
TCTATATAAGGTTCTTAACA+AGG 0.597267 1_2:+6517696 Msa0052300:intron
CAGAGTCCACTTCCGCAGTG+AGG 0.597909 1_2:-6517722 None:intergenic
GAGCAAGTGAGAAGGCGAAG+AGG 0.600193 1_2:+6516923 Msa0052300:CDS
TTGCGCTTCTTCCACGCGTG+AGG 0.601033 1_2:+6519181 Msa0052300:CDS
TGGAGGGGTATCAAGGTCTG+TGG 0.602251 1_2:+6518107 Msa0052300:CDS
CTTGAGGTCCAGGTGAGCAG+GGG 0.603640 1_2:-6518991 None:intergenic
AACTGATTGTTTATTCCATG+GGG 0.603764 1_2:-6520623 None:intergenic
TGCCAGTTTGATTGAGACAG+AGG 0.607596 1_2:-6520298 None:intergenic
GGCTCGAGTGTACAGGAGGA+GGG 0.608545 1_2:+6516790 Msa0052300:intron
TGTTTCCAGTCAATGGGCCA+AGG 0.609197 1_2:+6518731 Msa0052300:CDS
AATGCTGAGAATCGTAGTAG+TGG 0.609669 1_2:+6520262 Msa0052300:CDS
AAATGCAAATGGGATGTGGT+TGG 0.611558 1_2:+6519342 Msa0052300:CDS
TTCGCACTTTGATAATGGAG+GGG 0.612231 1_2:+6518092 Msa0052300:CDS
ATTTCAATTCACCTCTGTCG+AGG 0.612569 1_2:+6518298 Msa0052300:CDS
AATCGTAGTAGTGGAGGACA+TGG 0.615602 1_2:+6520271 Msa0052300:CDS
CGTGTAAAATTCATGGATGT+GGG 0.615653 1_2:+6518642 Msa0052300:CDS
CCATGTAAAGCTCGAGCATG+AGG 0.615971 1_2:-6519035 None:intergenic
CCCTAAGTATACATAATGCA+CGG 0.616376 1_2:-6513956 None:intergenic
GTTATCCACAGAGTGTTGGA+TGG 0.618028 1_2:-6519215 None:intergenic
CTCAGCCAGCAGTTAAACAC+TGG 0.619535 1_2:-6522994 None:intergenic
TGTAACGATTCTATTGAGGA+AGG 0.622487 1_2:+6514152 Msa0052300:CDS
CTGATCAAGATCAGGTATGG+AGG 0.624099 1_2:-6512021 None:intergenic
TACTGTAGAATTGAAAACCA+TGG 0.624291 1_2:+6512227 Msa0052300:intron
GGAGGGGTATCAAGGTCTGT+GGG 0.624939 1_2:+6518108 Msa0052300:CDS
TACGAGTGTACAAAGAATTG+TGG 0.625707 1_2:+6513533 Msa0052300:CDS
GGTTCTTGGACAGGCAGCGG+AGG 0.625958 1_2:-6520932 None:intergenic
TTATCACTGGATCCTCGTCA+AGG 0.626365 1_2:+6520382 Msa0052300:CDS
TTCCACAAGTGAAGACAGAA+GGG 0.627444 1_2:+6522774 Msa0052300:CDS
GAAACTACATCAGTATTGCA+AGG 0.628178 1_2:+6517790 Msa0052300:CDS
GAACAGTTAATGTTGTAAGT+GGG 0.628522 1_2:+6518934 Msa0052300:CDS
AGTGGGCATGGTTATATGGA+TGG 0.629622 1_2:+6518951 Msa0052300:CDS
ACTCCACTTGCTCAAATACA+GGG 0.632303 1_2:+6520719 Msa0052300:CDS
GGGAGACAAGCTCCATAGCA+CGG 0.632765 1_2:-6520231 None:intergenic
TGCAATGGCGGAGATCGGCA+AGG 0.634386 1_2:+6516327 Msa0052300:CDS
GCTGAGAATCGTAGTAGTGG+AGG 0.635313 1_2:+6520265 Msa0052300:CDS
AGAATTTCATCTTGAGACAA+CGG 0.635627 1_2:-6511912 None:intergenic
CAATTGAGGGAGGAATCTGC+TGG 0.635898 1_2:-6520763 None:intergenic
CTGTTCCTGGACCAAAATGT+GGG 0.637100 1_2:-6518917 None:intergenic
AGGTGTGGAACATCTAACAT+GGG 0.637555 1_2:-6518151 None:intergenic
CTCATGCTCGAGCTTTACAT+GGG 0.638164 1_2:+6519036 Msa0052300:CDS
GTGCTTTGGCAGTGCAATGG+CGG 0.638567 1_2:+6516315 Msa0052300:intron
CAGTGCCATCCAACACTCTG+TGG 0.639870 1_2:+6519210 Msa0052300:CDS
GCTTACAGAGTCCCTAGGTG+TGG 0.640367 1_2:-6518166 None:intergenic
ATTCTCAGCATTCATTCTAG+GGG 0.642580 1_2:-6520251 None:intergenic
AATCTCTACACAGCAATCCA+GGG 0.642848 1_2:+6520170 Msa0052300:intron
GGTGGTGGTACAATTGAGGG+AGG 0.643179 1_2:-6520773 None:intergenic
CCCTGCCACTGATACTGCAG+CGG 0.643320 1_2:-6520980 None:intergenic
CTGTCTCAGATGCAACATGA+CGG 0.643549 1_2:-6518868 None:intergenic
AGTCAAGCAACTTCTTACAT+CGG 0.645362 1_2:-6517747 None:intergenic
GTGGTATTGAAAACAATGAG+AGG 0.645610 1_2:+6516349 Msa0052300:CDS
ATTGCTGACAGCTCCACTAG+AGG 0.648794 1_2:-6518322 None:intergenic
GGTGGCAAGGATGATAAGGG+TGG 0.650804 1_2:-6520791 None:intergenic
GATGTGGGACTTGGTAGTAG+GGG 0.651389 1_2:+6518657 Msa0052300:CDS
GGAGGTGGAGGAGAACCAGG+TGG 0.651816 1_2:-6520905 None:intergenic
CTAAGATCAATCACAGCGAG+AGG 0.651860 1_2:-6518795 None:intergenic
AAAGAGGGATCTTCTAACGA+AGG 0.656688 1_2:+6514041 Msa0052300:CDS
AATGTGCTTTGGCAGTGCAA+TGG 0.657288 1_2:+6516312 Msa0052300:intron
AATGGCCAATGGGATCCCCA+TGG 0.657343 1_2:+6520608 Msa0052300:CDS
GCTCTCATCGCATCTTCGAG+AGG 0.658656 1_2:+6512053 Msa0052300:CDS
AGTAAGGAAGAGGATTCCAA+TGG 0.660967 1_2:+6513654 Msa0052300:CDS
GTTGGAGGAAGGAAACCTGA+TGG 0.663261 1_2:+6520349 Msa0052300:CDS
CATTTGGAGGAACATAAACA+GGG 0.672619 1_2:-6520589 None:intergenic
GGACAGTGACCAGCATATCG+AGG 0.676518 1_2:-6513567 None:intergenic
CCACTAGAGGACCTCGACAG+AGG 0.689252 1_2:-6518309 None:intergenic
AAAATATTACCTCCTTGACG+AGG 0.701198 1_2:-6520394 None:intergenic
TCACTGGATCCTCGTCAAGG+AGG 0.702847 1_2:+6520385 Msa0052300:CDS
TCTCAGATGCAACATGACGG+AGG 0.707723 1_2:-6518865 None:intergenic
GGTGTGGAACATCTAACATG+GGG 0.713861 1_2:-6518150 None:intergenic
TGTGCTCCAGAGTATGCATG+TGG 0.715249 1_2:-6520515 None:intergenic
TCATTAGCTCATCATCTGTG+AGG 0.715984 1_2:-6519262 None:intergenic
AATGGCGGAGATCGGCAAGG+TGG 0.720279 1_2:+6516330 Msa0052300:CDS
ACAGTCTTAAAGAATCTGCG+TGG 0.720622 1_2:+6519398 Msa0052300:CDS
TGTAGAATTGAAAACCATGG+AGG 0.722204 1_2:+6512230 Msa0052300:intron
TTGGAGGAACATAAACAGGG+CGG 0.723997 1_2:-6520586 None:intergenic
ATTTCATCTTGAGACAACGG+CGG 0.724403 1_2:-6511909 None:intergenic
CAGTCAATATGGAATGTTCG+GGG 0.727149 1_2:+6520954 Msa0052300:CDS
TGTAGATAATGAGCTCAAGG+AGG 0.733608 1_2:+6516837 Msa0052300:CDS
GAATATGCAAGATAATCCCG+AGG 0.739409 1_2:+6513866 Msa0052300:CDS
TGTGATTCCTAGGATCTCCG+AGG 0.750807 1_2:+6517912 Msa0052300:CDS
TTAACAAGGACCCCTCACTG+CGG 0.803441 1_2:+6517710 Msa0052300:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATGTATATATATCATTTAT+TGG + chr1_2:6514297-6514316 Msa0052300:intron 10.0%
!! TATAATATTAATCAAAACAT+AGG + chr1_2:6519128-6519147 Msa0052300:CDS 10.0%
!! AAAAAAAAAAAAATTACTGT+TGG - chr1_2:6519638-6519657 None:intergenic 10.0%
!!! ACAGTAATTTTTTTTTTTTT+TGG + chr1_2:6519638-6519657 Msa0052300:intron 10.0%
!!! TATGATTTACTTGTTAATTA+GGG + chr1_2:6512137-6512156 Msa0052300:intron 15.0%
!! AAGGTTTAAATAATAGATAA+GGG - chr1_2:6514495-6514514 None:intergenic 15.0%
!! AAAGGTTTAAATAATAGATA+AGG - chr1_2:6514496-6514515 None:intergenic 15.0%
!!! AAGAATATAAACTTTTCAAT+AGG - chr1_2:6518534-6518553 None:intergenic 15.0%
!! TATAGAATAAAAGATTAGTA+TGG + chr1_2:6519720-6519739 Msa0052300:intron 15.0%
!!! TCATCTTAGAATTTTTATAT+TGG + chr1_2:6521136-6521155 Msa0052300:intron 15.0%
!!! CATCTTAGAATTTTTATATT+GGG + chr1_2:6521137-6521156 Msa0052300:intron 15.0%
!!! TTTTTTTAATTTCTGAAATG+AGG - chr1_2:6521758-6521777 None:intergenic 15.0%
!! ATAAGTAATATTATACTGTA+CGG - chr1_2:6522881-6522900 None:intergenic 15.0%
!!! GTATGATTTACTTGTTAATT+AGG + chr1_2:6512136-6512155 Msa0052300:intron 20.0%
!!! ATGTAATTACTTGTTGATTA+GGG + chr1_2:6512167-6512186 Msa0052300:intron 20.0%
!! AAATGATATTGAATGTTGTT+TGG + chr1_2:6512376-6512395 Msa0052300:intron 20.0%
!! GTTACGATATATTCATATAA+AGG + chr1_2:6512491-6512510 Msa0052300:intron 20.0%
!!! ATATCCCTATCTATTATTTT+GGG - chr1_2:6512787-6512806 None:intergenic 20.0%
!! AAAATAATAGATAGGGATAT+GGG + chr1_2:6512787-6512806 Msa0052300:intron 20.0%
!!! TTTTAAATGGCAAATGTTAA+TGG - chr1_2:6512863-6512882 None:intergenic 20.0%
!! TGCATATTAAGCATTTAATA+AGG - chr1_2:6513403-6513422 None:intergenic 20.0%
!!! TCTATTTTGAGCTTTATTAT+TGG + chr1_2:6514384-6514403 Msa0052300:intron 20.0%
!!! AACTCTTTTATGAAAAACTA+GGG + chr1_2:6515626-6515645 Msa0052300:intron 20.0%
!! AATTTATTAACGAACGAAAA+TGG + chr1_2:6515740-6515759 Msa0052300:intron 20.0%
!! ATTTATTAACGAACGAAAAT+GGG + chr1_2:6515741-6515760 Msa0052300:intron 20.0%
!! TAAATCCTGAAAAAAACAAT+GGG + chr1_2:6515924-6515943 Msa0052300:intron 20.0%
!!! TTATTAGCAACTTTTGTATT+AGG - chr1_2:6517368-6517387 None:intergenic 20.0%
!! ACCATACAATAAAAAAAACT+CGG - chr1_2:6517524-6517543 None:intergenic 20.0%
!!! AAAAAGTACTAAATTTGCAA+CGG - chr1_2:6517609-6517628 None:intergenic 20.0%
!! AATAACATTTAAGAAAACGA+AGG - chr1_2:6519570-6519589 None:intergenic 20.0%
!!! TTCGTTTTCTTAAATGTTAT+TGG + chr1_2:6519569-6519588 Msa0052300:intron 20.0%
!! TTTCTTAAATGTTATTGGAA+TGG + chr1_2:6519574-6519593 Msa0052300:intron 20.0%
!! ACTACTAATAAATTTACTGT+TGG - chr1_2:6519673-6519692 None:intergenic 20.0%
!! AAAAGACCTTACAAAATTAT+AGG - chr1_2:6519871-6519890 None:intergenic 20.0%
!! TTCATTTGAAAAACTTCTAT+AGG + chr1_2:6519928-6519947 Msa0052300:intron 20.0%
!! ACATAAATAATCTACATCAA+CGG - chr1_2:6520005-6520024 None:intergenic 20.0%
!! TAAAACAATTTAAAAGCTGT+TGG - chr1_2:6520091-6520110 None:intergenic 20.0%
!!! TGTTTTATAACAAAGTCTTT+TGG + chr1_2:6520104-6520123 Msa0052300:intron 20.0%
!!! GTAATGCCAAATAATTTTAA+TGG + chr1_2:6520671-6520690 Msa0052300:CDS 20.0%
!! ACATCAATTAACAATAAAGT+AGG - chr1_2:6521484-6521503 None:intergenic 20.0%
!!! AGATTGTTACATTGATTTAT+TGG + chr1_2:6521907-6521926 Msa0052300:intron 20.0%
!! TTGAAGAAAAAAAAAAACAG+AGG + chr1_2:6522053-6522072 Msa0052300:intron 20.0%
!! AAACAAGATATAAAAGAGAA+AGG + chr1_2:6522099-6522118 Msa0052300:intron 20.0%
!! AACAAGATATAAAAGAGAAA+GGG + chr1_2:6522100-6522119 Msa0052300:intron 20.0%
!!! ATCCTACAAATACTTATTTT+TGG + chr1_2:6522465-6522484 Msa0052300:intron 20.0%
!! TTGTTAAATAGCAACTATAA+TGG - chr1_2:6522642-6522661 None:intergenic 20.0%
!!! ATGCATACTAATATGTTTTA+TGG - chr1_2:6522673-6522692 None:intergenic 20.0%
!!! ATTTGTTTTTCATTTCAAGA+TGG + chr1_2:6522814-6522833 Msa0052300:intron 20.0%
!! TAAGTAATATTATACTGTAC+GGG - chr1_2:6522880-6522899 None:intergenic 20.0%
! GTTAAAAACAAGGAAAGTTA+AGG - chr1_2:6511644-6511663 None:intergenic 25.0%
!!! TACTTGTTAATTAGGGTTTT+AGG + chr1_2:6512144-6512163 Msa0052300:intron 25.0%
!! GATGTAATTACTTGTTGATT+AGG + chr1_2:6512166-6512185 Msa0052300:intron 25.0%
!! ATTACAGAAACTACATTTTG+AGG - chr1_2:6512300-6512319 None:intergenic 25.0%
!! ATATTGAATGTTGTTTGGAA+TGG + chr1_2:6512381-6512400 Msa0052300:intron 25.0%
!!! TTTACATTCAACTCACTTTT+AGG - chr1_2:6512462-6512481 None:intergenic 25.0%
!! TGAGTTGAAAAATGAATTCA+AGG + chr1_2:6512514-6512533 Msa0052300:intron 25.0%
! AAGCTAAAATTTGTAGCTTT+GGG - chr1_2:6512560-6512579 None:intergenic 25.0%
!!! TATCCCTATCTATTATTTTG+GGG - chr1_2:6512786-6512805 None:intergenic 25.0%
!! CATATCCCTATCTATTATTT+TGG - chr1_2:6512788-6512807 None:intergenic 25.0%
! CAAAATAATAGATAGGGATA+TGG + chr1_2:6512786-6512805 Msa0052300:intron 25.0%
! AAATAATAGATAGGGATATG+GGG + chr1_2:6512788-6512807 Msa0052300:intron 25.0%
!! TTGCCATTTAAAAAAAAGAC+AGG + chr1_2:6512870-6512889 Msa0052300:intron 25.0%
!! TGCCATTTAAAAAAAAGACA+GGG + chr1_2:6512871-6512890 Msa0052300:intron 25.0%
!!! ATCCCTGTCTTTTTTTTAAA+TGG - chr1_2:6512876-6512895 None:intergenic 25.0%
! TGTAAGGTAATGTTAAAATC+AGG + chr1_2:6512915-6512934 Msa0052300:intron 25.0%
! GATAGAAAAATCTTCATGAT+TGG + chr1_2:6513459-6513478 Msa0052300:intron 25.0%
!!! TGAAACTTTTAAAATGTGTC+AGG + chr1_2:6513507-6513526 Msa0052300:intron 25.0%
!!! ATGCATATTGATAATGACTT+TGG - chr1_2:6513613-6513632 None:intergenic 25.0%
! TCATTATCAATATGCATAAC+TGG + chr1_2:6513616-6513635 Msa0052300:CDS 25.0%
!!! TTTTTTGTTGCCTTATTTGA+GGG + chr1_2:6513807-6513826 Msa0052300:CDS 25.0%
!! CTTTTCTGAATTGAAAGAAA+AGG + chr1_2:6513890-6513909 Msa0052300:CDS 25.0%
! ATAGAATCGTTACATGATTT+AGG - chr1_2:6514146-6514165 None:intergenic 25.0%
!!! TGAAAAGTATTTATGCAACT+TGG + chr1_2:6514414-6514433 Msa0052300:intron 25.0%
!! TAAATAATAGATAAGGGCAT+AGG - chr1_2:6514489-6514508 None:intergenic 25.0%
!!! TTTTAAGACAAGGCTATTAA+AGG - chr1_2:6514514-6514533 None:intergenic 25.0%
!! TTTAAGTTAACTTGAGCTTT+AGG + chr1_2:6514565-6514584 Msa0052300:intron 25.0%
!! TTAAGTTAACTTGAGCTTTA+GGG + chr1_2:6514566-6514585 Msa0052300:intron 25.0%
!!! TCTTTGATACTTTGTTTCTA+TGG - chr1_2:6514948-6514967 None:intergenic 25.0%
!! AAACAAAGTATCAAAGACTT+AGG + chr1_2:6514951-6514970 Msa0052300:intron 25.0%
! ACATTACATTACTCAAAACA+CGG + chr1_2:6515160-6515179 Msa0052300:intron 25.0%
! TGATATCCGATTAATCAAAT+AGG + chr1_2:6515185-6515204 Msa0052300:intron 25.0%
! CTCAAACTAATATTAGAGAT+AGG - chr1_2:6515226-6515245 None:intergenic 25.0%
!! TCAAGCTTTTATAGTATACA+TGG - chr1_2:6515358-6515377 None:intergenic 25.0%
!! TATGGTACAAACTTAATTTG+AGG - chr1_2:6515437-6515456 None:intergenic 25.0%
! CAAATTAAGTTTGTACCATA+TGG + chr1_2:6515437-6515456 Msa0052300:intron 25.0%
! TAATTAGGAATCTACTCTTT+AGG - chr1_2:6515592-6515611 None:intergenic 25.0%
!! GAACTCTTTTATGAAAAACT+AGG + chr1_2:6515625-6515644 Msa0052300:intron 25.0%
! TTTATTAACGAACGAAAATG+GGG + chr1_2:6515742-6515761 Msa0052300:intron 25.0%
! CTAAATCCTGAAAAAAACAA+TGG + chr1_2:6515923-6515942 Msa0052300:intron 25.0%
! TTCTATATACAAACTTACAC+GGG - chr1_2:6515979-6515998 None:intergenic 25.0%
! CTTCTATATACAAACTTACA+CGG - chr1_2:6515980-6515999 None:intergenic 25.0%
! GTATATAGAAGCAAGATTAT+TGG + chr1_2:6515989-6516008 Msa0052300:intron 25.0%
! TAGGACATTATTAAAGTGTA+AGG + chr1_2:6516028-6516047 Msa0052300:intron 25.0%
! ACATTATTAAAGTGTAAGGA+AGG + chr1_2:6516032-6516051 Msa0052300:intron 25.0%
! CATTATTAAAGTGTAAGGAA+GGG + chr1_2:6516033-6516052 Msa0052300:intron 25.0%
!!! ATTTTTCCGCTTTTAGTAAT+AGG + chr1_2:6516065-6516084 Msa0052300:intron 25.0%
! AAAATTGTAACTGAATAGGT+AGG + chr1_2:6517032-6517051 Msa0052300:intron 25.0%
! GAAATGAATTAGAAGGTTAT+TGG + chr1_2:6517054-6517073 Msa0052300:intron 25.0%
! TGTAGAATTAACACTGAATA+TGG - chr1_2:6517181-6517200 None:intergenic 25.0%
! TTTCAAAACACTTATCCATA+TGG - chr1_2:6517272-6517291 None:intergenic 25.0%
! TAGAGCTTAGTCTATATAAT+TGG - chr1_2:6517323-6517342 None:intergenic 25.0%
!! GTTGCAAATTTAGTACTTTT+TGG + chr1_2:6517608-6517627 Msa0052300:intron 25.0%
! GTTAAGAACCTTATATAGAA+AGG - chr1_2:6517695-6517714 None:intergenic 25.0%
! TCTATATAAGGTTCTTAACA+AGG + chr1_2:6517696-6517715 Msa0052300:intron 25.0%
!!! AATGTTCCTATTTTTAAAGC+AGG + chr1_2:6518069-6518088 Msa0052300:intron 25.0%
! TTTAGGAGTAATTCATTTGA+TGG + chr1_2:6518228-6518247 Msa0052300:CDS 25.0%
!! CTTGATTTTTCTCAACATTT+GGG - chr1_2:6518266-6518285 None:intergenic 25.0%
!! ACTTGATTTTTCTCAACATT+TGG - chr1_2:6518267-6518286 None:intergenic 25.0%
!! TCTCTATTTGAAACCTAATA+TGG - chr1_2:6518503-6518522 None:intergenic 25.0%
! ATATTAGGTTTCAAATAGAG+AGG + chr1_2:6518502-6518521 Msa0052300:CDS 25.0%
!!! TCTAGTTCTCATATTTATGT+TGG + chr1_2:6518705-6518724 Msa0052300:CDS 25.0%
! ATCAAGGAAAGTAGTTTATA+AGG + chr1_2:6518770-6518789 Msa0052300:CDS 25.0%
! TCAAGGAAAGTAGTTTATAA+GGG + chr1_2:6518771-6518790 Msa0052300:CDS 25.0%
! TATAACTACTTCTTTCTCTT+CGG - chr1_2:6518896-6518915 None:intergenic 25.0%
! TTCCAGTCATATAATTATCA+TGG - chr1_2:6519157-6519176 None:intergenic 25.0%
!! TGTTTTTCCAAATAGAATTC+AGG + chr1_2:6519432-6519451 Msa0052300:CDS 25.0%
!!! CATATTTGTTGATTTAAGTG+TGG + chr1_2:6519496-6519515 Msa0052300:intron 25.0%
! CAGTAAATTTATTAGTAGTG+TGG + chr1_2:6519674-6519693 Msa0052300:intron 25.0%
!! TTTTATTCTATACAAGTGCT+TGG - chr1_2:6519712-6519731 None:intergenic 25.0%
!! CAATCACCTATAATTTTGTA+AGG + chr1_2:6519862-6519881 Msa0052300:intron 25.0%
!! TTCTTCTTTATTTCATGAGT+TGG + chr1_2:6519890-6519909 Msa0052300:intron 25.0%
!!! TTTTCAGGTTTAATTGCAAA+TGG - chr1_2:6520211-6520230 None:intergenic 25.0%
!!! AATTGTGTTTGTTTCTGAAA+TGG + chr1_2:6520467-6520486 Msa0052300:intron 25.0%
! TAACTGATTGTTTATTCCAT+GGG - chr1_2:6520627-6520646 None:intergenic 25.0%
! CTGATTAGATTTATAAAGAG+TGG - chr1_2:6521205-6521224 None:intergenic 25.0%
! CACTCTTTATAAATCTAATC+AGG + chr1_2:6521203-6521222 Msa0052300:intron 25.0%
! GCCTTATATTTAATCTATCT+GGG + chr1_2:6521225-6521244 Msa0052300:intron 25.0%
! TCCCAGATAGATTAAATATA+AGG - chr1_2:6521229-6521248 None:intergenic 25.0%
! TGAGTTATCAAATATCCTTT+GGG + chr1_2:6521407-6521426 Msa0052300:intron 25.0%
!!! GTTAATTGATGTTTTATTCC+AGG + chr1_2:6521492-6521511 Msa0052300:intron 25.0%
! TGAAATTAGGCTAATTACAA+GGG - chr1_2:6521636-6521655 None:intergenic 25.0%
! AAATCAAATTAGGGAAGATA+AGG + chr1_2:6522123-6522142 Msa0052300:intron 25.0%
! TAAGCTGAAAAGAGAAAAAT+AGG + chr1_2:6522155-6522174 Msa0052300:intron 25.0%
! AAGCTGAAAAGAGAAAAATA+GGG + chr1_2:6522156-6522175 Msa0052300:intron 25.0%
!!! TCTGTTTTTCTCTTTTAAAG+TGG + chr1_2:6522406-6522425 Msa0052300:intron 25.0%
! TGCCAAAAATAAGTATTTGT+AGG - chr1_2:6522470-6522489 None:intergenic 25.0%
!!! TTTTTTTCTCTTTAAGAAGG+TGG - chr1_2:6522606-6522625 None:intergenic 25.0%
!!! CCTTTTTTTTCTCTTTAAGA+AGG - chr1_2:6522609-6522628 None:intergenic 25.0%
! CCTTCTTAAAGAGAAAAAAA+AGG + chr1_2:6522606-6522625 Msa0052300:intron 25.0%
! AAGAGAAAAAAAAGGATCTA+TGG + chr1_2:6522614-6522633 Msa0052300:intron 25.0%
! GGGTAAACTAAAATAAGATT+CGG - chr1_2:6522860-6522879 None:intergenic 25.0%
AGAGTGATGTGTTAAAAACA+AGG - chr1_2:6511654-6511673 None:intergenic 30.0%
AGAATTTCATCTTGAGACAA+CGG - chr1_2:6511915-6511934 None:intergenic 30.0%
AGAAAATTCTGATCAAGATC+AGG - chr1_2:6512032-6512051 None:intergenic 30.0%
TACTGTAGAATTGAAAACCA+TGG + chr1_2:6512227-6512246 Msa0052300:intron 30.0%
ACTCAAAACACAGTGTTAAA+AGG - chr1_2:6512339-6512358 None:intergenic 30.0%
GAAGCTAAAATTTGTAGCTT+TGG - chr1_2:6512561-6512580 None:intergenic 30.0%
!! CTTCGAGTTAGAATCAATTT+TGG + chr1_2:6512577-6512596 Msa0052300:intron 30.0%
! AGTTTTTAATCCTCCAAAAC+TGG + chr1_2:6512630-6512649 Msa0052300:intron 30.0%
!! TGAAATTTTGAGTGCATGTT+TGG - chr1_2:6512658-6512677 None:intergenic 30.0%
!!! ATCCCTATCTATTATTTTGG+GGG - chr1_2:6512785-6512804 None:intergenic 30.0%
AATAATAGATAGGGATATGG+GGG + chr1_2:6512789-6512808 Msa0052300:intron 30.0%
CATATGCTCGTTAAATTGTA+AGG + chr1_2:6512899-6512918 Msa0052300:intron 30.0%
AAACAGAGAATAGTAGTGAT+AGG + chr1_2:6512943-6512962 Msa0052300:intron 30.0%
! ATTTTTGCATGTTAGCATCT+TGG + chr1_2:6513264-6513283 Msa0052300:intron 30.0%
TGTGCTTTATGCAACTAATT+TGG - chr1_2:6513314-6513333 None:intergenic 30.0%
TATTTCATTGCCCATAATGT+AGG + chr1_2:6513432-6513451 Msa0052300:intron 30.0%
TCTATCAGTTCCTACATTAT+GGG - chr1_2:6513445-6513464 None:intergenic 30.0%
TTCTATCAGTTCCTACATTA+TGG - chr1_2:6513446-6513465 None:intergenic 30.0%
AAAATCTTCATGATTGGAGT+TGG + chr1_2:6513465-6513484 Msa0052300:intron 30.0%
AGCATATCGAGGAATTAAAT+CGG - chr1_2:6513559-6513578 None:intergenic 30.0%
!! ATTGATAATGACTTTGGATG+CGG - chr1_2:6513607-6513626 None:intergenic 30.0%
AGTTTCAAATGCAATACCAT+TGG - chr1_2:6513673-6513692 None:intergenic 30.0%
! ACTGCTAAAGCATGTATTTT+CGG + chr1_2:6513690-6513709 Msa0052300:CDS 30.0%
! TAAAGCATGTATTTTCGGAT+TGG + chr1_2:6513695-6513714 Msa0052300:CDS 30.0%
CTCAAATAAGGCAACAAAAA+AGG - chr1_2:6513808-6513827 None:intergenic 30.0%
!!! CTTTTTTGTTGCCTTATTTG+AGG + chr1_2:6513806-6513825 Msa0052300:CDS 30.0%
TTTCAATTCAGAAAAGACCT+CGG - chr1_2:6513886-6513905 None:intergenic 30.0%
ATCATGTAACGATTCTATTG+AGG + chr1_2:6514148-6514167 Msa0052300:CDS 30.0%
!!! AAACCATGCTGTTTTTTTCA+TGG + chr1_2:6514438-6514457 Msa0052300:intron 30.0%
!!! TGCACAACTATTTTAAGACA+AGG - chr1_2:6514524-6514543 None:intergenic 30.0%
ATTAGAAGTAGTGAAGAACA+AGG - chr1_2:6514734-6514753 None:intergenic 30.0%
TTCTTCACTACTTCTAATAC+TGG + chr1_2:6514736-6514755 Msa0052300:intron 30.0%
! AATTGACTCAAATGTTGATC+TGG + chr1_2:6514813-6514832 Msa0052300:intron 30.0%
TAAACCACATTGAACTAAGT+TGG - chr1_2:6515057-6515076 None:intergenic 30.0%
TTCAATGTGGTTTATGAACA+TGG + chr1_2:6515063-6515082 Msa0052300:intron 30.0%
TTGCTGCCTATTTGATTAAT+CGG - chr1_2:6515194-6515213 None:intergenic 30.0%
! CTCTAATATTAGTTTGAGAC+AGG + chr1_2:6515228-6515247 Msa0052300:intron 30.0%
! AGACAATTTTTCCTTTCTTG+TGG + chr1_2:6515288-6515307 Msa0052300:intron 30.0%
TGGCATCATTCATGAATTTA+TGG - chr1_2:6515338-6515357 None:intergenic 30.0%
! CTTTTCATTCAATTGCCATA+TGG - chr1_2:6515455-6515474 None:intergenic 30.0%
GGCAATTGAATGAAAAGTTT+AGG + chr1_2:6515458-6515477 Msa0052300:intron 30.0%
!! GTAACTTCACTTTTCATGAA+AGG - chr1_2:6515496-6515515 None:intergenic 30.0%
GATTCCTAATTATCAGCAAA+TGG + chr1_2:6515600-6515619 Msa0052300:intron 30.0%
! TCAACCATTTGCTGATAATT+AGG - chr1_2:6515607-6515626 None:intergenic 30.0%
TAGGGAAAAAAGTAACACAA+AGG + chr1_2:6515644-6515663 Msa0052300:intron 30.0%
!! GACTTTTTAGAAAAGAAAGC+TGG + chr1_2:6515709-6515728 Msa0052300:intron 30.0%
!!! TTTTTTTCAGGATTTAGCCA+GGG - chr1_2:6515920-6515939 None:intergenic 30.0%
AAAAACAATGGGTGGAAAAA+AGG + chr1_2:6515935-6515954 Msa0052300:intron 30.0%
TAAGCTCCTATTACTAAAAG+CGG - chr1_2:6516074-6516093 None:intergenic 30.0%
GCAGTAGGATACAAAATATA+AGG + chr1_2:6516136-6516155 Msa0052300:intron 30.0%
ATGAGAGGAACAAGAATATA+TGG + chr1_2:6516364-6516383 Msa0052300:CDS 30.0%
TGAGAGGAACAAGAATATAT+GGG + chr1_2:6516365-6516384 Msa0052300:CDS 30.0%
TTCAAATGATCCAGGAAAAA+AGG + chr1_2:6516389-6516408 Msa0052300:CDS 30.0%
TGACATCCAAAGAGTAATAT+AGG + chr1_2:6516699-6516718 Msa0052300:intron 30.0%
GTTTGACCTATATTACTCTT+TGG - chr1_2:6516708-6516727 None:intergenic 30.0%
AGTAATATAGGTCAAACCAA+TGG + chr1_2:6516711-6516730 Msa0052300:intron 30.0%
! CCAAAACACACTGATTAATT+GGG - chr1_2:6516885-6516904 None:intergenic 30.0%
TAGGTAGGAAATGAATTAGA+AGG + chr1_2:6517047-6517066 Msa0052300:intron 30.0%
GAATTAGAAGGTTATTGGTA+AGG + chr1_2:6517059-6517078 Msa0052300:intron 30.0%
CCTTACAATATGGATAAGAA+AGG - chr1_2:6517136-6517155 None:intergenic 30.0%
CCTTTCTTATCCATATTGTA+AGG + chr1_2:6517133-6517152 Msa0052300:intron 30.0%
TTCTTATCCATATTGTAAGG+AGG + chr1_2:6517136-6517155 Msa0052300:intron 30.0%
TTAACACTGAATATGGACAA+CGG - chr1_2:6517174-6517193 None:intergenic 30.0%
GCTATACTGGAAATAGATTA+TGG - chr1_2:6517207-6517226 None:intergenic 30.0%
TCCCAATATTTCAGTCTATT+TGG + chr1_2:6517237-6517256 Msa0052300:intron 30.0%
GCCAAATAGACTGAAATATT+GGG - chr1_2:6517241-6517260 None:intergenic 30.0%
AGCCAAATAGACTGAAATAT+TGG - chr1_2:6517242-6517261 None:intergenic 30.0%
CTACATAATATTTGCCTATG+AGG + chr1_2:6517388-6517407 Msa0052300:intron 30.0%
!! AATTATTGACTTAGCCTCAT+AGG - chr1_2:6517405-6517424 None:intergenic 30.0%
!!! GCCGAGTTTTTTTTATTGTA+TGG + chr1_2:6517520-6517539 Msa0052300:intron 30.0%
TTGCATGTCCTTTCTATATA+AGG + chr1_2:6517684-6517703 Msa0052300:intron 30.0%
ATTCGTGAAGATTGAAGAAT+CGG - chr1_2:6517884-6517903 None:intergenic 30.0%
ATAGAAACTATGTGATTCCT+AGG + chr1_2:6517902-6517921 Msa0052300:CDS 30.0%
!!! ACCAATATTTTCAAGTTCCT+CGG - chr1_2:6517932-6517951 None:intergenic 30.0%
ATTGGTGAAAGATCACAAAA+AGG + chr1_2:6517946-6517965 Msa0052300:CDS 30.0%
AGCAATTTATGAGTTCATGT+TGG + chr1_2:6517970-6517989 Msa0052300:intron 30.0%
!! TGACTTTTGGTTAAAGAAGT+TGG - chr1_2:6518381-6518400 None:intergenic 30.0%
!! GCACAAAACAATTTGACTTT+TGG - chr1_2:6518394-6518413 None:intergenic 30.0%
!! CAAATTGTTTTGTGCTTTGA+CGG + chr1_2:6518399-6518418 Msa0052300:CDS 30.0%
!! AAATTGTTTTGTGCTTTGAC+GGG + chr1_2:6518400-6518419 Msa0052300:CDS 30.0%
TTTATATTCTTCCCATCGAA+TGG + chr1_2:6518543-6518562 Msa0052300:CDS 30.0%
AAACTACTTTCCTTGATTCA+TGG - chr1_2:6518767-6518786 None:intergenic 30.0%
GAACAGTTAATGTTGTAAGT+GGG + chr1_2:6518934-6518953 Msa0052300:CDS 30.0%
CTCCATGATAATTATATGAC+TGG + chr1_2:6519152-6519171 Msa0052300:CDS 30.0%
ACACAAGCAAAAATGCAAAT+GGG + chr1_2:6519332-6519351 Msa0052300:CDS 30.0%
GTTGAATGTAGTAATGTTGA+CGG + chr1_2:6519368-6519387 Msa0052300:CDS 30.0%
TGTGTAACCTGAATTCTATT+TGG - chr1_2:6519442-6519461 None:intergenic 30.0%
ACATTTAAGAAAACGAAGGT+AGG - chr1_2:6519566-6519585 None:intergenic 30.0%
TCATCAGAATGCATATATGA+GGG - chr1_2:6519976-6519995 None:intergenic 30.0%
ATCATCAGAATGCATATATG+AGG - chr1_2:6519977-6519996 None:intergenic 30.0%
GATAAATGATCATAACCATC+AGG - chr1_2:6520367-6520386 None:intergenic 30.0%
TGGTTATGATCATTTATCAC+TGG + chr1_2:6520369-6520388 Msa0052300:CDS 30.0%
! GTCAAGGAGGTAATATTTTA+TGG + chr1_2:6520398-6520417 Msa0052300:intron 30.0%
! TTTTGTGTGTCATGGAATTA+TGG + chr1_2:6520431-6520450 Msa0052300:intron 30.0%
AACTGATTGTTTATTCCATG+GGG - chr1_2:6520626-6520645 None:intergenic 30.0%
GTAACTGATTGTTTATTCCA+TGG - chr1_2:6520628-6520647 None:intergenic 30.0%
TATTTGGCATTACAACAGTT+TGG - chr1_2:6520664-6520683 None:intergenic 30.0%
GGACTGCCATTAAAATTATT+TGG - chr1_2:6520680-6520699 None:intergenic 30.0%
GTTACTGAAACAGGTATAAA+AGG - chr1_2:6520701-6520720 None:intergenic 30.0%
AATATGAATTCTTACTCAGC+AGG - chr1_2:6521097-6521116 None:intergenic 30.0%
! GGCCTTATATTTAATCTATC+TGG + chr1_2:6521224-6521243 Msa0052300:intron 30.0%
! TATTTAATCTATCTGGGACT+TGG + chr1_2:6521231-6521250 Msa0052300:intron 30.0%
TTAGTCATGTCTAATTTGGT+GGG - chr1_2:6521331-6521350 None:intergenic 30.0%
TTTAGTCATGTCTAATTTGG+TGG - chr1_2:6521332-6521351 None:intergenic 30.0%
GTGAGTTATCAAATATCCTT+TGG + chr1_2:6521406-6521425 Msa0052300:intron 30.0%
GAGTTATCAAATATCCTTTG+GGG + chr1_2:6521408-6521427 Msa0052300:intron 30.0%
!!! GTTTTTAGGTTTATGTAGCT+CGG + chr1_2:6521546-6521565 Msa0052300:intron 30.0%
GAAATTAGGCTAATTACAAG+GGG - chr1_2:6521635-6521654 None:intergenic 30.0%
GTGAAATTAGGCTAATTACA+AGG - chr1_2:6521637-6521656 None:intergenic 30.0%
!! TATTTACAGATTGGTCTAGA+TGG - chr1_2:6521696-6521715 None:intergenic 30.0%
GCTACAATCTATTTACAGAT+TGG - chr1_2:6521705-6521724 None:intergenic 30.0%
GTAGCTATACATAATTCCTT+AGG + chr1_2:6521720-6521739 Msa0052300:intron 30.0%
TCTTGGAAATCTAAACTAGA+TGG - chr1_2:6521805-6521824 None:intergenic 30.0%
TAGTTTAGATTTCCAAGACT+CGG + chr1_2:6521807-6521826 Msa0052300:intron 30.0%
GTCATATCTCTATTTGATGT+GGG - chr1_2:6521981-6522000 None:intergenic 30.0%
AGAGAAAGGGAAATCAAATT+AGG + chr1_2:6522113-6522132 Msa0052300:intron 30.0%
GAGAAAGGGAAATCAAATTA+GGG + chr1_2:6522114-6522133 Msa0052300:intron 30.0%
AATTAGGGAAGATAAGGTAA+AGG + chr1_2:6522129-6522148 Msa0052300:intron 30.0%
AGCTGAAAAGAGAAAAATAG+GGG + chr1_2:6522157-6522176 Msa0052300:intron 30.0%
GCAAAACAATCATAGCATAT+TGG + chr1_2:6522533-6522552 Msa0052300:intron 30.0%
ACTTATTTAGTGAGACTTCT+AGG + chr1_2:6522895-6522914 Msa0052300:intron 30.0%
CCATTGGAGTTATTTGGAAA+CGG - chr1_2:6511686-6511705 None:intergenic 35.0%
TTTCCAAATAACTCCAATGG+AGG + chr1_2:6511686-6511705 Msa0052300:exon 35.0%
TTCCAAATAACTCCAATGGA+GGG + chr1_2:6511687-6511706 Msa0052300:exon 35.0%
!!! CTTTTTTAGAGGATGTTCGA+CGG - chr1_2:6511811-6511830 None:intergenic 35.0%
!!! TAGAGCTTTCGCTTTTTTAG+AGG - chr1_2:6511822-6511841 None:intergenic 35.0%
ATTCTGATCAAGATCAGGTA+TGG - chr1_2:6512027-6512046 None:intergenic 35.0%
TGTAGAATTGAAAACCATGG+AGG + chr1_2:6512230-6512249 Msa0052300:intron 35.0%
TTTGTGCATGGAATTTCACT+AGG + chr1_2:6512258-6512277 Msa0052300:CDS 35.0%
GTTTCTGTAATTGATTGCTG+TGG + chr1_2:6512309-6512328 Msa0052300:CDS 35.0%
! CGAGTTAGAATCAATTTTGG+AGG + chr1_2:6512580-6512599 Msa0052300:intron 35.0%
!!! ATCTATTATTTTGGGGGAGT+CGG - chr1_2:6512779-6512798 None:intergenic 35.0%
ACTCCCCCAAAATAATAGAT+AGG + chr1_2:6512779-6512798 Msa0052300:intron 35.0%
CTCCCCCAAAATAATAGATA+GGG + chr1_2:6512780-6512799 Msa0052300:intron 35.0%
ATAATAGATAGGGATATGGG+GGG + chr1_2:6512790-6512809 Msa0052300:intron 35.0%
! TATTCCTTGTTTATGCACGA+AGG - chr1_2:6513018-6513037 None:intergenic 35.0%
! AATGAGTGTTTGGATGGATT+AGG - chr1_2:6513058-6513077 None:intergenic 35.0%
CTGAATCAGTAATTCAACAG+TGG - chr1_2:6513109-6513128 None:intergenic 35.0%
CAAACATGGAATTCCTACAT+GGG - chr1_2:6513166-6513185 None:intergenic 35.0%
TCAAACATGGAATTCCTACA+TGG - chr1_2:6513167-6513186 None:intergenic 35.0%
CTCAGTGATTCAATCAAACA+TGG - chr1_2:6513180-6513199 None:intergenic 35.0%
CATGTTTGATTGAATCACTG+AGG + chr1_2:6513178-6513197 Msa0052300:intron 35.0%
ACATATCAATGCGTGTAACT+TGG - chr1_2:6513241-6513260 None:intergenic 35.0%
!! AACTAATTTGGCCTTAAGTG+GGG - chr1_2:6513302-6513321 None:intergenic 35.0%
!! CAACTAATTTGGCCTTAAGT+GGG - chr1_2:6513303-6513322 None:intergenic 35.0%
TGTACACATATGGCTATTTG+AGG - chr1_2:6513359-6513378 None:intergenic 35.0%
TACGAGTGTACAAAGAATTG+TGG + chr1_2:6513533-6513552 Msa0052300:CDS 35.0%
GATTTAATTCCTCGATATGC+TGG + chr1_2:6513558-6513577 Msa0052300:CDS 35.0%
CAATATGCATAACTGGAGTT+TGG + chr1_2:6513623-6513642 Msa0052300:CDS 35.0%
GACATCATTTCCCTCAAATA+AGG - chr1_2:6513820-6513839 None:intergenic 35.0%
TTCAATTCAGAAAAGACCTC+GGG - chr1_2:6513885-6513904 None:intergenic 35.0%
TCCGTGCATTATGTATACTT+AGG + chr1_2:6513955-6513974 Msa0052300:CDS 35.0%
CCCTAAGTATACATAATGCA+CGG - chr1_2:6513959-6513978 None:intergenic 35.0%
CCGTGCATTATGTATACTTA+GGG + chr1_2:6513956-6513975 Msa0052300:CDS 35.0%
TGTAACGATTCTATTGAGGA+AGG + chr1_2:6514152-6514171 Msa0052300:CDS 35.0%
TCACCATGAAAAAAACAGCA+TGG - chr1_2:6514444-6514463 None:intergenic 35.0%
! ATAATAGATAAGGGCATAGG+TGG - chr1_2:6514486-6514505 None:intergenic 35.0%
! TGTACTGATGCAAATTATGG+AGG - chr1_2:6514693-6514712 None:intergenic 35.0%
! TCGTGTACTGATGCAAATTA+TGG - chr1_2:6514696-6514715 None:intergenic 35.0%
! TAATTTGCATCAGTACACGA+AGG + chr1_2:6514696-6514715 Msa0052300:intron 35.0%
GAAGAACAAGGATAATGAAC+CGG - chr1_2:6514722-6514741 None:intergenic 35.0%
TTCACTACTTCTAATACTGG+TGG + chr1_2:6514739-6514758 Msa0052300:intron 35.0%
AAGACTAAGGATGAGAAGTT+TGG + chr1_2:6514842-6514861 Msa0052300:intron 35.0%
! CAAAGTATCAAAGACTTAGG+AGG + chr1_2:6514954-6514973 Msa0052300:intron 35.0%
!! TCATCTAGAGCTTTTAGTCT+CGG - chr1_2:6515106-6515125 None:intergenic 35.0%
GAAAGCAATGAGTTAATCAG+AGG - chr1_2:6515384-6515403 None:intergenic 35.0%
GACACCAGAGATATTAGAAA+CGG + chr1_2:6515551-6515570 Msa0052300:intron 35.0%
CTATCCGTTTCTAATATCTC+TGG - chr1_2:6515558-6515577 None:intergenic 35.0%
ATCTACTCTTTAGGTGACTA+GGG - chr1_2:6515583-6515602 None:intergenic 35.0%
AATCTACTCTTTAGGTGACT+AGG - chr1_2:6515584-6515603 None:intergenic 35.0%
ACTTGTGTTGAAGCTAAACT+TGG + chr1_2:6515775-6515794 Msa0052300:intron 35.0%
CTTGTGTTGAAGCTAAACTT+GGG + chr1_2:6515776-6515795 Msa0052300:intron 35.0%
! CATCACCTCTTTTATCAACA+AGG + chr1_2:6515859-6515878 Msa0052300:intron 35.0%
! ACCTCTTTTATCAACAAGGT+AGG + chr1_2:6515863-6515882 Msa0052300:intron 35.0%
! TCCTACCTTGTTGATAAAAG+AGG - chr1_2:6515867-6515886 None:intergenic 35.0%
!!! TTTTTTCAGGATTTAGCCAG+GGG - chr1_2:6515919-6515938 None:intergenic 35.0%
!!! GTTTTTTTCAGGATTTAGCC+AGG - chr1_2:6515921-6515940 None:intergenic 35.0%
ATCCTGAAAAAAACAATGGG+TGG + chr1_2:6515927-6515946 Msa0052300:intron 35.0%
!!! TTCCACCCATTGTTTTTTTC+AGG - chr1_2:6515932-6515951 None:intergenic 35.0%
AGCAAGATTATTGGAAAGAC+TGG + chr1_2:6515998-6516017 Msa0052300:intron 35.0%
GCAAGATTATTGGAAAGACT+GGG + chr1_2:6515999-6516018 Msa0052300:intron 35.0%
CAACATCTTATCACTGCTAA+TGG - chr1_2:6516101-6516120 None:intergenic 35.0%
!! AGTGATAAGATGTTGCTTTC+TGG + chr1_2:6516106-6516125 Msa0052300:intron 35.0%
TCAAGTATCCACAAATACAC+AGG + chr1_2:6516191-6516210 Msa0052300:intron 35.0%
TTGACTTCTCTTAATGTCAC+TGG - chr1_2:6516224-6516243 None:intergenic 35.0%
AGTGACATTAAGAGAAGTCA+AGG + chr1_2:6516223-6516242 Msa0052300:intron 35.0%
! GTGGTATTGAAAACAATGAG+AGG + chr1_2:6516349-6516368 Msa0052300:CDS 35.0%
ATATGGGATTCAAATGATCC+AGG + chr1_2:6516381-6516400 Msa0052300:CDS 35.0%
AAAAAAGGAGCTCATATCGA+AGG + chr1_2:6516404-6516423 Msa0052300:CDS 35.0%
AGGATACCATTGAACTTTGA+CGG + chr1_2:6516461-6516480 Msa0052300:intron 35.0%
TATTTGCCGTCAAAGTTCAA+TGG - chr1_2:6516470-6516489 None:intergenic 35.0%
ATGCCAACAAATTGCTGTAA+TGG + chr1_2:6516675-6516694 Msa0052300:intron 35.0%
TGCCAACAAATTGCTGTAAT+GGG + chr1_2:6516676-6516695 Msa0052300:intron 35.0%
TTGAGCTCATTATCTACAAC+TGG - chr1_2:6516835-6516854 None:intergenic 35.0%
AGTTGTAGATAATGAGCTCA+AGG + chr1_2:6516834-6516853 Msa0052300:CDS 35.0%
! CCCAATTAATCAGTGTGTTT+TGG + chr1_2:6516882-6516901 Msa0052300:CDS 35.0%
! GCCAAAACACACTGATTAAT+TGG - chr1_2:6516886-6516905 None:intergenic 35.0%
AGAGGCTGAATTGAGTATTT+GGG + chr1_2:6517006-6517025 Msa0052300:intron 35.0%
GGGGAAAATTGTAACTGAAT+AGG + chr1_2:6517028-6517047 Msa0052300:intron 35.0%
TTATTGGTAAGGAAGAGATC+AGG + chr1_2:6517070-6517089 Msa0052300:intron 35.0%
TATTGGTAAGGAAGAGATCA+GGG + chr1_2:6517071-6517090 Msa0052300:intron 35.0%
! AATATGGACAACGGATTTGA+GGG - chr1_2:6517165-6517184 None:intergenic 35.0%
GGATATAACAAGAGCTATAC+TGG - chr1_2:6517220-6517239 None:intergenic 35.0%
!! ATTTGGCTTGTGATACCATA+TGG + chr1_2:6517254-6517273 Msa0052300:intron 35.0%
TAGACTAAGCTCTACTTAAC+TGG + chr1_2:6517329-6517348 Msa0052300:intron 35.0%
CACAACAATAAGCATTCGAT+TGG + chr1_2:6517439-6517458 Msa0052300:intron 35.0%
AAAGAACAATTGCACCATCA+TGG - chr1_2:6517469-6517488 None:intergenic 35.0%
! ATTTTCTGTTGTGCTAGTCA+TGG + chr1_2:6517498-6517517 Msa0052300:intron 35.0%
AGTCAAGCAACTTCTTACAT+CGG - chr1_2:6517750-6517769 None:intergenic 35.0%
TGCAATACTGATGTAGTTTC+CGG - chr1_2:6517790-6517809 None:intergenic 35.0%
GAAACTACATCAGTATTGCA+AGG + chr1_2:6517790-6517809 Msa0052300:CDS 35.0%
TCAGTATTGCAAGGAATTCT+TGG + chr1_2:6517799-6517818 Msa0052300:CDS 35.0%
TCCGAGGAACTTGAAAATAT+TGG + chr1_2:6517928-6517947 Msa0052300:CDS 35.0%
!! TGCGAACCTGCTTTAAAAAT+AGG - chr1_2:6518078-6518097 None:intergenic 35.0%
TTAGAACAGCAGTAGACTTT+AGG + chr1_2:6518211-6518230 Msa0052300:CDS 35.0%
GGTGACATAAAACGATGATT+GGG - chr1_2:6518360-6518379 None:intergenic 35.0%
TGGTGACATAAAACGATGAT+TGG - chr1_2:6518361-6518380 None:intergenic 35.0%
!! AATTGTTTTGTGCTTTGACG+GGG + chr1_2:6518401-6518420 Msa0052300:CDS 35.0%
! TAGATATTGTTGCTGCTTCT+AGG + chr1_2:6518436-6518455 Msa0052300:CDS 35.0%
TGAAACCTAATATGGCTTTC+AGG - chr1_2:6518495-6518514 None:intergenic 35.0%
AGGTTTCAAATAGAGAGGTT+TGG + chr1_2:6518507-6518526 Msa0052300:CDS 35.0%
CTAAAGCAAATCCATTCGAT+GGG - chr1_2:6518557-6518576 None:intergenic 35.0%
ACTAAAGCAAATCCATTCGA+TGG - chr1_2:6518558-6518577 None:intergenic 35.0%
TTGCTTTAGTTGAGTACAGA+AGG + chr1_2:6518568-6518587 Msa0052300:CDS 35.0%
AGTTGAGTACAGAAGGATAA+TGG + chr1_2:6518575-6518594 Msa0052300:CDS 35.0%
! CCACATCCATGAATTTTACA+CGG - chr1_2:6518644-6518663 None:intergenic 35.0%
CGTGTAAAATTCATGGATGT+GGG + chr1_2:6518642-6518661 Msa0052300:CDS 35.0%
TTGGAAATGTTTCCAGTCAA+TGG + chr1_2:6518724-6518743 Msa0052300:CDS 35.0%
TGGAAATGTTTCCAGTCAAT+GGG + chr1_2:6518725-6518744 Msa0052300:CDS 35.0%
ATGAGATTCTCCATGAATCA+AGG + chr1_2:6518754-6518773 Msa0052300:CDS 35.0%
! AGTAGTTATAGCCCACATTT+TGG + chr1_2:6518906-6518925 Msa0052300:CDS 35.0%
CTTACAACATTAACTGTTCC+TGG - chr1_2:6518933-6518952 None:intergenic 35.0%
GGAACAGTTAATGTTGTAAG+TGG + chr1_2:6518933-6518952 Msa0052300:CDS 35.0%
AATTGTTATCCACAGAGTGT+TGG - chr1_2:6519222-6519241 None:intergenic 35.0%
! AGTATTTGCAACCTTGCTAT+TGG + chr1_2:6519284-6519303 Msa0052300:CDS 35.0%
GACACAAGCAAAAATGCAAA+TGG + chr1_2:6519331-6519350 Msa0052300:CDS 35.0%
TCTATTTGGAAAAACAGTCC+TGG - chr1_2:6519428-6519447 None:intergenic 35.0%
GTTCATCTGTTATCAGTAGT+GGG + chr1_2:6519596-6519615 Msa0052300:intron 35.0%
CTGTTGGATTCTAAGTTGTA+TGG - chr1_2:6519622-6519641 None:intergenic 35.0%
GCTAGAAGCTAATTCAAATC+AGG + chr1_2:6519950-6519969 Msa0052300:intron 35.0%
ATTCTCAGCATTCATTCTAG+GGG - chr1_2:6520254-6520273 None:intergenic 35.0%
GATTCTCAGCATTCATTCTA+GGG - chr1_2:6520255-6520274 None:intergenic 35.0%
AAAATATTACCTCCTTGACG+AGG - chr1_2:6520397-6520416 None:intergenic 35.0%
CATTTGGAGGAACATAAACA+GGG - chr1_2:6520592-6520611 None:intergenic 35.0%
GCATTACAACAGTTTGGTAT+TGG - chr1_2:6520658-6520677 None:intergenic 35.0%
! ATTCCATATTGACTGGTTCT+TGG - chr1_2:6520949-6520968 None:intergenic 35.0%
ACCAGTCAATATGGAATGTT+CGG + chr1_2:6520952-6520971 Msa0052300:CDS 35.0%
ACTGTACAATTTATGCATGC+AGG + chr1_2:6521029-6521048 Msa0052300:intron 35.0%
CTGTACAATTTATGCATGCA+GGG + chr1_2:6521030-6521049 Msa0052300:intron 35.0%
!! CTTTACAAGACGGTTTTGTA+AGG - chr1_2:6521173-6521192 None:intergenic 35.0%
GCGTTTAGTCATGTCTAATT+TGG - chr1_2:6521335-6521354 None:intergenic 35.0%
TGATAACTCACTCTATGAGA+TGG - chr1_2:6521397-6521416 None:intergenic 35.0%
ATATGGTGCATATGAGATGT+TGG - chr1_2:6521450-6521469 None:intergenic 35.0%
! CATTCGCAGTGTATGTTTTT+AGG + chr1_2:6521532-6521551 Msa0052300:intron 35.0%
GAGGTTCAAAAGAATTCCTA+AGG - chr1_2:6521739-6521758 None:intergenic 35.0%
! AAAGCATGCTGGTTATGTTT+GGG - chr1_2:6521847-6521866 None:intergenic 35.0%
! AAAAGCATGCTGGTTATGTT+TGG - chr1_2:6521848-6521867 None:intergenic 35.0%
TCATACACGTTAGCACAAAT+GGG - chr1_2:6521874-6521893 None:intergenic 35.0%
ATCATACACGTTAGCACAAA+TGG - chr1_2:6521875-6521894 None:intergenic 35.0%
ATTTGTGCTAACGTGTATGA+TGG + chr1_2:6521874-6521893 Msa0052300:intron 35.0%
TTTGTGCTAACGTGTATGAT+GGG + chr1_2:6521875-6521894 Msa0052300:intron 35.0%
GTGGGATGTCAATAAAATGT+TGG - chr1_2:6521963-6521982 None:intergenic 35.0%
GGTCATATCTCTATTTGATG+TGG - chr1_2:6521982-6522001 None:intergenic 35.0%
AGAGAAAAATAGGGGAAAAC+AGG + chr1_2:6522165-6522184 Msa0052300:intron 35.0%
! ACATAGCTTTACACCTGATA+AGG + chr1_2:6522248-6522267 Msa0052300:intron 35.0%
TGTTGAGAGGTTTACCATTT+GGG + chr1_2:6522344-6522363 Msa0052300:intron 35.0%
AGGTTTACCATTTGGGTATT+AGG + chr1_2:6522351-6522370 Msa0052300:intron 35.0%
!!! TCTTTTAAAGTGGTCATGTG+CGG + chr1_2:6522416-6522435 Msa0052300:intron 35.0%
CCATAGAACTATTGTGTACA+GGG - chr1_2:6522581-6522600 None:intergenic 35.0%
ACACAATAAAGTCAGACTCA+GGG - chr1_2:6522713-6522732 None:intergenic 35.0%
AACACAATAAAGTCAGACTC+AGG - chr1_2:6522714-6522733 None:intergenic 35.0%
TTGTGGAAGATGGGATTAAA+CGG - chr1_2:6522762-6522781 None:intergenic 35.0%
CCGTTTCCAAATAACTCCAA+TGG + chr1_2:6511683-6511702 Msa0052300:exon 40.0%
TCCAAATAACTCCAATGGAG+GGG + chr1_2:6511688-6511707 Msa0052300:exon 40.0%
! AGAAAGTGAGAGCTAGTTTC+CGG - chr1_2:6511873-6511892 None:intergenic 40.0%
ATTTCATCTTGAGACAACGG+CGG - chr1_2:6511912-6511931 None:intergenic 40.0%
GCAATTCGAAACCTCTATGA+AGG + chr1_2:6511957-6511976 Msa0052300:CDS 40.0%
TTCGCTTGTAACCTTCATAG+AGG - chr1_2:6511971-6511990 None:intergenic 40.0%
!! TGGAGGAAGATTGTTTCTGA+AGG - chr1_2:6512007-6512026 None:intergenic 40.0%
!! ATGTTTGGTTCCAGTTTTGG+AGG - chr1_2:6512643-6512662 None:intergenic 40.0%
!! TGCATGTTTGGTTCCAGTTT+TGG - chr1_2:6512646-6512665 None:intergenic 40.0%
TAGACCTTCGTGCATAAACA+AGG + chr1_2:6513011-6513030 Msa0052300:intron 40.0%
AGTCACAATGAGTGTTTGGA+TGG - chr1_2:6513064-6513083 None:intergenic 40.0%
TCTCAGTCACAATGAGTGTT+TGG - chr1_2:6513068-6513087 None:intergenic 40.0%
ATCAGTAATTCAACAGTGGC+AGG - chr1_2:6513105-6513124 None:intergenic 40.0%
ACTTCTCTACTTACCCATGT+AGG + chr1_2:6513150-6513169 Msa0052300:intron 40.0%
TTTCAGAATCTCCCCACTTA+AGG + chr1_2:6513288-6513307 Msa0052300:intron 40.0%
!! GCAACTAATTTGGCCTTAAG+TGG - chr1_2:6513304-6513323 None:intergenic 40.0%
AGCCATATGTGTACATCATG+TGG + chr1_2:6513364-6513383 Msa0052300:intron 40.0%
CACCACATGATGTACACATA+TGG - chr1_2:6513369-6513388 None:intergenic 40.0%
!! GAGTTTGGCATTGACTAGTA+AGG + chr1_2:6513638-6513657 Msa0052300:CDS 40.0%
AGTAAGGAAGAGGATTCCAA+TGG + chr1_2:6513654-6513673 Msa0052300:CDS 40.0%
CCTCTAATTACAGCTGATGT+TGG - chr1_2:6513753-6513772 None:intergenic 40.0%
CCAACATCAGCTGTAATTAG+AGG + chr1_2:6513750-6513769 Msa0052300:CDS 40.0%
CGGGATTATCTTGCATATTC+AGG - chr1_2:6513866-6513885 None:intergenic 40.0%
GAATATGCAAGATAATCCCG+AGG + chr1_2:6513866-6513885 Msa0052300:CDS 40.0%
! CAAGCTGCAAGCAATTCTTT+TGG - chr1_2:6513996-6514015 None:intergenic 40.0%
! AGAATTGCTTGCAGCTTGTT+TGG + chr1_2:6513998-6514017 Msa0052300:CDS 40.0%
! GTTAGAAGATCCCTCTTTTG+TGG - chr1_2:6514039-6514058 None:intergenic 40.0%
AAAGAGGGATCTTCTAACGA+AGG + chr1_2:6514041-6514060 Msa0052300:CDS 40.0%
! TGATGAAGCAGTTCACCTTT+TGG + chr1_2:6514103-6514122 Msa0052300:CDS 40.0%
! GATGAAGCAGTTCACCTTTT+GGG + chr1_2:6514104-6514123 Msa0052300:CDS 40.0%
CATCATTTGCTCTACCCAAA+AGG - chr1_2:6514121-6514140 None:intergenic 40.0%
!! CTTTTGGGTAGAGCAAATGA+TGG + chr1_2:6514119-6514138 Msa0052300:CDS 40.0%
ATCGGAGATATGGTTGTCAT+TGG - chr1_2:6514213-6514232 None:intergenic 40.0%
TTTGAATCGCATCGGAGATA+TGG - chr1_2:6514223-6514242 None:intergenic 40.0%
! ACAGCTCTTTTGAATCGCAT+CGG - chr1_2:6514231-6514250 None:intergenic 40.0%
AAAGAGCTGTTTGCTTATGC+TGG + chr1_2:6514241-6514260 Msa0052300:CDS 40.0%
CATAGGTGGAATTCTTCCAA+GGG - chr1_2:6514472-6514491 None:intergenic 40.0%
GCTATATCGATGTGTCTTTC+TGG - chr1_2:6514671-6514690 None:intergenic 40.0%
CTACTTCTAATACTGGTGGA+AGG + chr1_2:6514743-6514762 Msa0052300:intron 40.0%
CTCGTCTGTCTTCTGTTTAA+AGG - chr1_2:6514777-6514796 None:intergenic 40.0%
CTTTAAACAGAAGACAGACG+AGG + chr1_2:6514775-6514794 Msa0052300:intron 40.0%
GATCTGGAAGACAAAGACTA+AGG + chr1_2:6514829-6514848 Msa0052300:intron 40.0%
AATTACCATTCTCCTCCTGA+AGG + chr1_2:6514877-6514896 Msa0052300:intron 40.0%
GAGTCCAACTTAGTTCAATG+TGG + chr1_2:6515050-6515069 Msa0052300:intron 40.0%
!! CATCTAGAGCTTTTAGTCTC+GGG - chr1_2:6515105-6515124 None:intergenic 40.0%
TTGAGACAGGCATTTGAAAG+AGG + chr1_2:6515241-6515260 Msa0052300:intron 40.0%
GCAAAATAAGGCCACAAGAA+AGG - chr1_2:6515302-6515321 None:intergenic 40.0%
!!! CTTGTGGCCTTATTTTGCTT+CGG + chr1_2:6515304-6515323 Msa0052300:intron 40.0%
!!! TTGTGGCCTTATTTTGCTTC+GGG + chr1_2:6515305-6515324 Msa0052300:intron 40.0%
! CTAATATCTCTGGTGTCAGA+TGG - chr1_2:6515548-6515567 None:intergenic 40.0%
TAGCTTCAACACAAGTGCTT+GGG - chr1_2:6515771-6515790 None:intergenic 40.0%
TTAGCTTCAACACAAGTGCT+TGG - chr1_2:6515772-6515791 None:intergenic 40.0%
GAGATTTGGACTCGTATCAA+AGG + chr1_2:6515805-6515824 Msa0052300:intron 40.0%
TGATGCATGTTCTGATCAGA+AGG - chr1_2:6515844-6515863 None:intergenic 40.0%
ATTTAGCCAGGGGAAAACAT+TGG - chr1_2:6515909-6515928 None:intergenic 40.0%
TGGAAAGACTGGGAACATTT+AGG + chr1_2:6516009-6516028 Msa0052300:intron 40.0%
! GTGCTATTCCTGTGTATTTG+TGG - chr1_2:6516202-6516221 None:intergenic 40.0%
!!! GATATGAGCTCCTTTTTTCC+TGG - chr1_2:6516402-6516421 None:intergenic 40.0%
AAGTTCAATGGTATCCTCGT+TGG - chr1_2:6516458-6516477 None:intergenic 40.0%
ACGGCAAATAGAGAACAACA+GGG + chr1_2:6516480-6516499 Msa0052300:intron 40.0%
GAGAAAGGAAGTCACTATTG+TGG + chr1_2:6516526-6516545 Msa0052300:intron 40.0%
AAGTCACTATTGTGGTGTGA+GGG + chr1_2:6516534-6516553 Msa0052300:intron 40.0%
CACCCATTACAGCAATTTGT+TGG - chr1_2:6516681-6516700 None:intergenic 40.0%
!! ATTGCAGTCTTTGGAACCAT+TGG - chr1_2:6516730-6516749 None:intergenic 40.0%
TGTAGATAATGAGCTCAAGG+AGG + chr1_2:6516837-6516856 Msa0052300:CDS 40.0%
!! GATGCTGATTTGGAAGTGAA+TGG + chr1_2:6516859-6516878 Msa0052300:CDS 40.0%
GAGAGGCTGAATTGAGTATT+TGG + chr1_2:6517005-6517024 Msa0052300:intron 40.0%
GAGGCTGAATTGAGTATTTG+GGG + chr1_2:6517007-6517026 Msa0052300:intron 40.0%
AGGCTGAATTGAGTATTTGG+GGG + chr1_2:6517008-6517027 Msa0052300:intron 40.0%
AGGGAAACCTCCTTACAATA+TGG - chr1_2:6517146-6517165 None:intergenic 40.0%
! GAATATGGACAACGGATTTG+AGG - chr1_2:6517166-6517185 None:intergenic 40.0%
! ATTCGATTGGTTAGCCATGA+TGG + chr1_2:6517452-6517471 Msa0052300:intron 40.0%
!! GTTCGCACTTTGATAATGGA+GGG + chr1_2:6518091-6518110 Msa0052300:CDS 40.0%
!! TTCGCACTTTGATAATGGAG+GGG + chr1_2:6518092-6518111 Msa0052300:CDS 40.0%
!! TTGATAATGGAGGGGTATCA+AGG + chr1_2:6518100-6518119 Msa0052300:CDS 40.0%
AGGTGTGGAACATCTAACAT+GGG - chr1_2:6518154-6518173 None:intergenic 40.0%
TAGGTGTGGAACATCTAACA+TGG - chr1_2:6518155-6518174 None:intergenic 40.0%
ATGTTAGATGTTCCACACCT+AGG + chr1_2:6518154-6518173 Msa0052300:CDS 40.0%
TGTTAGATGTTCCACACCTA+GGG + chr1_2:6518155-6518174 Msa0052300:CDS 40.0%
TCTACTGCTGTTCTAACTGT+AGG - chr1_2:6518207-6518226 None:intergenic 40.0%
ATTTCAATTCACCTCTGTCG+AGG + chr1_2:6518298-6518317 Msa0052300:CDS 40.0%
ACATGCCTGAAAGCCATATT+AGG + chr1_2:6518487-6518506 Msa0052300:CDS 40.0%
TCCTTGCCGTGTAAAATTCA+TGG + chr1_2:6518635-6518654 Msa0052300:CDS 40.0%
! TCCATGAATTTTACACGGCA+AGG - chr1_2:6518639-6518658 None:intergenic 40.0%
CCGTGTAAAATTCATGGATG+TGG + chr1_2:6518641-6518660 Msa0052300:CDS 40.0%
AAATTCATGGATGTGGGACT+TGG + chr1_2:6518648-6518667 Msa0052300:CDS 40.0%
TTCATGGAGAATCTCATCCT+TGG - chr1_2:6518751-6518770 None:intergenic 40.0%
GTTAATGTTGTAAGTGGGCA+TGG + chr1_2:6518939-6518958 Msa0052300:CDS 40.0%
TGTAAGTGGGCATGGTTATA+TGG + chr1_2:6518947-6518966 Msa0052300:CDS 40.0%
TCATTAGCTCATCATCTGTG+AGG - chr1_2:6519265-6519284 None:intergenic 40.0%
!! AACCTTGCTATTGGAAACTC+TGG + chr1_2:6519293-6519312 Msa0052300:CDS 40.0%
AACCAGAGTTTCCAATAGCA+AGG - chr1_2:6519298-6519317 None:intergenic 40.0%
GCAAAAATGCAAATGGGATG+TGG + chr1_2:6519338-6519357 Msa0052300:CDS 40.0%
AAATGCAAATGGGATGTGGT+TGG + chr1_2:6519342-6519361 Msa0052300:CDS 40.0%
ACAGTCTTAAAGAATCTGCG+TGG + chr1_2:6519398-6519417 Msa0052300:CDS 40.0%
GGTTCATCTGTTATCAGTAG+TGG + chr1_2:6519595-6519614 Msa0052300:intron 40.0%
AATCTCTACACAGCAATCCA+GGG + chr1_2:6520170-6520189 Msa0052300:intron 40.0%
TAAACCTGAAAACCGTGCTA+TGG + chr1_2:6520219-6520238 Msa0052300:CDS 40.0%
CGATTCTCAGCATTCATTCT+AGG - chr1_2:6520256-6520275 None:intergenic 40.0%
AATGCTGAGAATCGTAGTAG+TGG + chr1_2:6520262-6520281 Msa0052300:CDS 40.0%
! GTACAGCTTTTTGTGTGTCA+TGG + chr1_2:6520423-6520442 Msa0052300:intron 40.0%
TATGCATGTGGAACATTTCC+TGG - chr1_2:6520506-6520525 None:intergenic 40.0%
AATGTTCCACATGCATACTC+TGG + chr1_2:6520509-6520528 Msa0052300:CDS 40.0%
!! AATTTGTTGTGGTGGTGGAA+TGG - chr1_2:6520549-6520568 None:intergenic 40.0%
!! GATGACTGAATTTGTTGTGG+TGG - chr1_2:6520557-6520576 None:intergenic 40.0%
!! GGAGATGACTGAATTTGTTG+TGG - chr1_2:6520560-6520579 None:intergenic 40.0%
CCATTTGGAGGAACATAAAC+AGG - chr1_2:6520593-6520612 None:intergenic 40.0%
CCTGTTTATGTTCCTCCAAA+TGG + chr1_2:6520590-6520609 Msa0052300:CDS 40.0%
!! ACAGTTTGGTATTGGTTCAC+AGG - chr1_2:6520650-6520669 None:intergenic 40.0%
AACTCCACTTGCTCAAATAC+AGG + chr1_2:6520718-6520737 Msa0052300:CDS 40.0%
ACTCCACTTGCTCAAATACA+GGG + chr1_2:6520719-6520738 Msa0052300:CDS 40.0%
! ATATTGACTGGTTCTTGGAC+AGG - chr1_2:6520944-6520963 None:intergenic 40.0%
TGTCCAAGAACCAGTCAATA+TGG + chr1_2:6520943-6520962 Msa0052300:CDS 40.0%
CCAGTCAATATGGAATGTTC+GGG + chr1_2:6520953-6520972 Msa0052300:CDS 40.0%
CAGTCAATATGGAATGTTCG+GGG + chr1_2:6520954-6520973 Msa0052300:CDS 40.0%
CAGGGAAATCTCTGTAAAAG+TGG + chr1_2:6520998-6521017 Msa0052300:intron 40.0%
AAACCGTCTTGTAAAGTGAG+AGG + chr1_2:6521177-6521196 Msa0052300:intron 40.0%
!! TTCCTTGTTTCTGTTGCAGA+TGG + chr1_2:6521305-6521324 Msa0052300:intron 40.0%
TGCATATGAGATGTTGGAGA+AGG - chr1_2:6521444-6521463 None:intergenic 40.0%
AGTAGGCACAGTTCATGATA+TGG - chr1_2:6521467-6521486 None:intergenic 40.0%
! GCTCATCTAAAGTAATAGCC+TGG - chr1_2:6521513-6521532 None:intergenic 40.0%
TCTCAGTCACAGGTGAAATT+AGG - chr1_2:6521649-6521668 None:intergenic 40.0%
!! AGATTGGTCTAGATGGTGAT+GGG - chr1_2:6521689-6521708 None:intergenic 40.0%
CATACACGTTAGCACAAATG+GGG - chr1_2:6521873-6521892 None:intergenic 40.0%
TGACCAAAGCAGTCTTTACA+AGG + chr1_2:6521997-6522016 Msa0052300:intron 40.0%
! AAGCCTTGTAAAGACTGCTT+TGG - chr1_2:6522003-6522022 None:intergenic 40.0%
AAGCAGTCTTTACAAGGCTT+TGG + chr1_2:6522003-6522022 Msa0052300:intron 40.0%
! GTCTTTACAAGGCTTTGGTA+AGG + chr1_2:6522008-6522027 Msa0052300:intron 40.0%
GGGAAAACAGGTGAAAGAAA+GGG + chr1_2:6522177-6522196 Msa0052300:intron 40.0%
! AGAGAGAGGTATAGTAACAG+AGG + chr1_2:6522203-6522222 Msa0052300:intron 40.0%
TTCACATCGAACTCCATTTC+TGG - chr1_2:6522299-6522318 None:intergenic 40.0%
GTGTTGAGAGGTTTACCATT+TGG + chr1_2:6522343-6522362 Msa0052300:intron 40.0%
ATCACGACCTAATACCCAAA+TGG - chr1_2:6522361-6522380 None:intergenic 40.0%
AGAGAAAAACAGAGTTCACG+AGG - chr1_2:6522399-6522418 None:intergenic 40.0%
!!! CTTATTTTTGGCAATGCCAC+TGG + chr1_2:6522477-6522496 Msa0052300:intron 40.0%
! CCCTGTACACAATAGTTCTA+TGG + chr1_2:6522578-6522597 Msa0052300:intron 40.0%
GCCATAGAACTATTGTGTAC+AGG - chr1_2:6522582-6522601 None:intergenic 40.0%
ATAAAGTCAGACTCAGGGAA+TGG - chr1_2:6522708-6522727 None:intergenic 40.0%
TGTCTTCACTTGTGGAAGAT+GGG - chr1_2:6522771-6522790 None:intergenic 40.0%
TTCCACAAGTGAAGACAGAA+GGG + chr1_2:6522774-6522793 Msa0052300:CDS 40.0%
! GATGAATCTTGTTCTGAGCA+AGG + chr1_2:6522962-6522981 Msa0052300:CDS 40.0%
! ATCTTGTTCTGAGCAAGGAA+TGG + chr1_2:6522967-6522986 Msa0052300:CDS 40.0%
! TCTTGTTCTGAGCAAGGAAT+GGG + chr1_2:6522968-6522987 Msa0052300:CDS 40.0%
CCAAATAACTCCAATGGAGG+GGG + chr1_2:6511689-6511708 Msa0052300:exon 45.0%
!! GGAGAGTGGTGAGTTTGTTA+CGG - chr1_2:6511763-6511782 None:intergenic 45.0%
!! TTTTAGAGGATGTTCGACGG+AGG - chr1_2:6511808-6511827 None:intergenic 45.0%
CTGATCAAGATCAGGTATGG+AGG - chr1_2:6512024-6512043 None:intergenic 45.0%
ATGCACAAACGATTCCTCCA+TGG - chr1_2:6512247-6512266 None:intergenic 45.0%
ATGGAGGAATCGTTTGTGCA+TGG + chr1_2:6512246-6512265 Msa0052300:CDS 45.0%
!! TAGCTTTGGGCTTCTGCAAT+TGG - chr1_2:6512547-6512566 None:intergenic 45.0%
TTAGTGATACACGAGTCACC+TGG + chr1_2:6512722-6512741 Msa0052300:intron 45.0%
!! GGCATTGACTAGTAAGGAAG+AGG + chr1_2:6513644-6513663 Msa0052300:CDS 45.0%
! GCAGCTTGTTTGGAACTCTT+AGG + chr1_2:6514008-6514027 Msa0052300:CDS 45.0%
TTAGGCTCCACCACAAAAGA+GGG + chr1_2:6514026-6514045 Msa0052300:CDS 45.0%
! AGAAGATCCCTCTTTTGTGG+TGG - chr1_2:6514036-6514055 None:intergenic 45.0%
!! GGAAGGCATCAAAGAGATTG+AGG + chr1_2:6514169-6514188 Msa0052300:CDS 45.0%
GGCATCAAAGAGATTGAGGT+TGG + chr1_2:6514173-6514192 Msa0052300:CDS 45.0%
TTTCATGGTGATCTCTCCCT+TGG + chr1_2:6514453-6514472 Msa0052300:intron 45.0%
GCATAGGTGGAATTCTTCCA+AGG - chr1_2:6514473-6514492 None:intergenic 45.0%
AATCACCTTCAGGAGGAGAA+TGG - chr1_2:6514885-6514904 None:intergenic 45.0%
ATTCTCCTCCTGAAGGTGAT+TGG + chr1_2:6514884-6514903 Msa0052300:intron 45.0%
TTCTCCTCCTGAAGGTGATT+GGG + chr1_2:6514885-6514904 Msa0052300:intron 45.0%
CATTTGTAGCCCTCTTTGCT+AGG + chr1_2:6514987-6515006 Msa0052300:intron 45.0%
! GCAGTCAGGTGCTTCTTTTT+GGG - chr1_2:6515026-6515045 None:intergenic 45.0%
! TGCAGTCAGGTGCTTCTTTT+TGG - chr1_2:6515027-6515046 None:intergenic 45.0%
!! AAAAGAAGCACCTGACTGCA+CGG + chr1_2:6515027-6515046 Msa0052300:intron 45.0%
AACATGGACAACACACCCAA+AGG + chr1_2:6515079-6515098 Msa0052300:intron 45.0%
GACAGGCATTTGAAAGAGGA+AGG + chr1_2:6515245-6515264 Msa0052300:intron 45.0%
!!! TGTGGCCTTATTTTGCTTCG+GGG + chr1_2:6515306-6515325 Msa0052300:intron 45.0%
TGACACCCCGAAGCAAAATA+AGG - chr1_2:6515314-6515333 None:intergenic 45.0%
GTGTTGAAGCTAAACTTGGG+AGG + chr1_2:6515779-6515798 Msa0052300:intron 45.0%
! GCAAATCCAATGTTTTCCCC+TGG + chr1_2:6515900-6515919 Msa0052300:intron 45.0%
AAAAGGTTGCTGCACACTTC+AGG + chr1_2:6515952-6515971 Msa0052300:intron 45.0%
CTTTCTGGATAGTGTGCAGT+AGG + chr1_2:6516121-6516140 Msa0052300:intron 45.0%
GATGAAATGAGTCAGTCGTG+AGG + chr1_2:6516245-6516264 Msa0052300:intron 45.0%
GCACATTGTCATCCCTACAT+GGG - chr1_2:6516299-6516318 None:intergenic 45.0%
AGCACATTGTCATCCCTACA+TGG - chr1_2:6516300-6516319 None:intergenic 45.0%
GTAGGGATGACAATGTGCTT+TGG + chr1_2:6516301-6516320 Msa0052300:intron 45.0%
AATGTGCTTTGGCAGTGCAA+TGG + chr1_2:6516312-6516331 Msa0052300:intron 45.0%
AAAGGAGCTCATATCGAAGG+TGG + chr1_2:6516407-6516426 Msa0052300:intron 45.0%
AAGGAGCTCATATCGAAGGT+GGG + chr1_2:6516408-6516427 Msa0052300:intron 45.0%
GACGGCAAATAGAGAACAAC+AGG + chr1_2:6516479-6516498 Msa0052300:intron 45.0%
!! AGAACAACAGGGTGTTGCTT+GGG + chr1_2:6516491-6516510 Msa0052300:intron 45.0%
GAAGTCACTATTGTGGTGTG+AGG + chr1_2:6516533-6516552 Msa0052300:intron 45.0%
AGTCACTATTGTGGTGTGAG+GGG + chr1_2:6516535-6516554 Msa0052300:intron 45.0%
AAACCAGCAACGACACTAAG+AGG - chr1_2:6516608-6516627 None:intergenic 45.0%
GGTTCCAAAGACTGCAATGA+AGG + chr1_2:6516732-6516751 Msa0052300:intron 45.0%
TCACCTTCATTCAGCTCTCT+TGG - chr1_2:6516761-6516780 None:intergenic 45.0%
GAGAGCTGAATGAAGGTGAT+AGG + chr1_2:6516762-6516781 Msa0052300:intron 45.0%
!!! TGTTTTGGCTGCACTTGAAG+TGG + chr1_2:6516897-6516916 Msa0052300:CDS 45.0%
GGCTGAATTGAGTATTTGGG+GGG + chr1_2:6517009-6517028 Msa0052300:intron 45.0%
AGAGATCAGGGAGATTTCTC+TGG + chr1_2:6517083-6517102 Msa0052300:intron 45.0%
CACGAGCAATGCATATGCTA+CGG - chr1_2:6517578-6517597 None:intergenic 45.0%
GCAGGTTCGCACTTTGATAA+TGG + chr1_2:6518087-6518106 Msa0052300:intron 45.0%
!! GGTTCGCACTTTGATAATGG+AGG + chr1_2:6518090-6518109 Msa0052300:intron 45.0%
GGTGTGGAACATCTAACATG+GGG - chr1_2:6518153-6518172 None:intergenic 45.0%
CTGTAGGTGAGAACATCTGA+TGG - chr1_2:6518191-6518210 None:intergenic 45.0%
GCAACAATATCTACAGCAGC+AGG - chr1_2:6518429-6518448 None:intergenic 45.0%
ATATGGCTTTCAGGCATGTC+AGG - chr1_2:6518486-6518505 None:intergenic 45.0%
ACACGGCAAGGAAAATTTCC+AGG - chr1_2:6518627-6518646 None:intergenic 45.0%
CTAAGATCAATCACAGCGAG+AGG - chr1_2:6518798-6518817 None:intergenic 45.0%
CTTTGAGTGTGCGTTGCTTA+TGG + chr1_2:6518818-6518837 Msa0052300:CDS 45.0%
CTGTCTCAGATGCAACATGA+CGG - chr1_2:6518871-6518890 None:intergenic 45.0%
!! TATAGCCCACATTTTGGTCC+AGG + chr1_2:6518912-6518931 Msa0052300:CDS 45.0%
CTGTTCCTGGACCAAAATGT+GGG - chr1_2:6518920-6518939 None:intergenic 45.0%
ACTGTTCCTGGACCAAAATG+TGG - chr1_2:6518921-6518940 None:intergenic 45.0%
AGTGGGCATGGTTATATGGA+TGG + chr1_2:6518951-6518970 Msa0052300:CDS 45.0%
CTCATGCTCGAGCTTTACAT+GGG + chr1_2:6519036-6519055 Msa0052300:CDS 45.0%
CATTCTTGTTCGACTGCTGT+CGG - chr1_2:6519069-6519088 None:intergenic 45.0%
!! GTTATCCACAGAGTGTTGGA+TGG - chr1_2:6519218-6519237 None:intergenic 45.0%
CTCATCATCTGTGAGGAACT+GGG - chr1_2:6519258-6519277 None:intergenic 45.0%
! GAAACTCTGGTTCCATTGCA+CGG + chr1_2:6519306-6519325 Msa0052300:CDS 45.0%
CAATCTCTACACAGCAATCC+AGG + chr1_2:6520169-6520188 Msa0052300:intron 45.0%
! AATCGTAGTAGTGGAGGACA+TGG + chr1_2:6520271-6520290 Msa0052300:CDS 45.0%
CACCTCTGTCTCAATCAAAC+TGG + chr1_2:6520296-6520315 Msa0052300:CDS 45.0%
TGCCAGTTTGATTGAGACAG+AGG - chr1_2:6520301-6520320 None:intergenic 45.0%
CTGGCATCTCTCTTGAATCA+GGG - chr1_2:6520327-6520346 None:intergenic 45.0%
TCTGGCATCTCTCTTGAATC+AGG - chr1_2:6520328-6520347 None:intergenic 45.0%
TCAAGAGAGATGCCAGAAGT+TGG + chr1_2:6520331-6520350 Msa0052300:CDS 45.0%
TTATCACTGGATCCTCGTCA+AGG + chr1_2:6520382-6520401 Msa0052300:CDS 45.0%
GAACATTTCCTGGTGCAGAA+GGG - chr1_2:6520496-6520515 None:intergenic 45.0%
!! GACTGAATTTGTTGTGGTGG+TGG - chr1_2:6520554-6520573 None:intergenic 45.0%
TTGGAGGAACATAAACAGGG+CGG - chr1_2:6520589-6520608 None:intergenic 45.0%
ATGTTCCTCCAAATGGCCAA+TGG + chr1_2:6520597-6520616 Msa0052300:CDS 45.0%
TGTTCCTCCAAATGGCCAAT+GGG + chr1_2:6520598-6520617 Msa0052300:CDS 45.0%
TTATTCCATGGGGATCCCAT+TGG - chr1_2:6520616-6520635 None:intergenic 45.0%
GCAAGTGGAGTTACTGAAAC+AGG - chr1_2:6520710-6520729 None:intergenic 45.0%
GTTCCCTGTATTTGAGCAAG+TGG - chr1_2:6520725-6520744 None:intergenic 45.0%
! TGCTGGTTATACGGTTGCAT+TGG - chr1_2:6520749-6520768 None:intergenic 45.0%
! GGAGGAATCTGCTGGTTATA+CGG - chr1_2:6520758-6520777 None:intergenic 45.0%
! AAGGGTGGTGGTACAATTGA+GGG - chr1_2:6520779-6520798 None:intergenic 45.0%
! TAAGGGTGGTGGTACAATTG+AGG - chr1_2:6520780-6520799 None:intergenic 45.0%
CCCGAACATTCCATATTGAC+TGG - chr1_2:6520956-6520975 None:intergenic 45.0%
AATTCTTACTCAGCAGGCTC+AGG - chr1_2:6521091-6521110 None:intergenic 45.0%
GCACCTCTCACTTTACAAGA+CGG - chr1_2:6521183-6521202 None:intergenic 45.0%
ATGAGATGTTGGAGAAGGCA+GGG - chr1_2:6521439-6521458 None:intergenic 45.0%
TATGAGATGTTGGAGAAGGC+AGG - chr1_2:6521440-6521459 None:intergenic 45.0%
GGGAATCATAGGATGGAGAA+GGG - chr1_2:6521606-6521625 None:intergenic 45.0%
TGGGAATCATAGGATGGAGA+AGG - chr1_2:6521607-6521626 None:intergenic 45.0%
CTATCTGACATCTCAGTCAC+AGG - chr1_2:6521659-6521678 None:intergenic 45.0%
!! CAGATTGGTCTAGATGGTGA+TGG - chr1_2:6521690-6521709 None:intergenic 45.0%
TGTTATAGTACGCCGAGTCT+TGG - chr1_2:6521822-6521841 None:intergenic 45.0%
! AAATGGGGACAAAAGCATGC+TGG - chr1_2:6521858-6521877 None:intergenic 45.0%
GGGGAAAACAGGTGAAAGAA+AGG + chr1_2:6522176-6522195 Msa0052300:intron 45.0%
GAAAGAAAGGGAGAAGAGAG+AGG + chr1_2:6522189-6522208 Msa0052300:intron 45.0%
GAGTTCGATGTGAAGAGAAG+AGG + chr1_2:6522305-6522324 Msa0052300:intron 45.0%
TCGATGTGAAGAGAAGAGGA+TGG + chr1_2:6522309-6522328 Msa0052300:intron 45.0%
GAAGAGGATGGAAGCAGTTT+AGG + chr1_2:6522321-6522340 Msa0052300:intron 45.0%
!! GAAGCAGTTTAGGTGTTGAG+AGG + chr1_2:6522331-6522350 Msa0052300:intron 45.0%
! TGTTTTGCTACCACTGCAAC+AGG - chr1_2:6522521-6522540 None:intergenic 45.0%
!! TGTGTTGACTTCTGATGCAG+AGG + chr1_2:6522728-6522747 Msa0052300:intron 45.0%
!! GTGTTGACTTCTGATGCAGA+GGG + chr1_2:6522729-6522748 Msa0052300:intron 45.0%
CTGTCTTCACTTGTGGAAGA+TGG - chr1_2:6522772-6522791 None:intergenic 45.0%
CTTCCACAAGTGAAGACAGA+AGG + chr1_2:6522773-6522792 Msa0052300:CDS 45.0%
TACCCTTCTGTCTTCACTTG+TGG - chr1_2:6522779-6522798 None:intergenic 45.0%
CCCCCTCCATTGGAGTTATT+TGG - chr1_2:6511692-6511711 None:intergenic 50.0%
AGAAGATTCTCCCCCTCCAT+TGG - chr1_2:6511702-6511721 None:intergenic 50.0%
!! GAGTGGTGAGTTTGTTACGG+TGG - chr1_2:6511760-6511779 None:intergenic 50.0%
! TGAGAGCTAGTTTCCGGTTG+TGG - chr1_2:6511867-6511886 None:intergenic 50.0%
ATAGATAGGGATATGGGGGG+AGG + chr1_2:6512793-6512812 Msa0052300:intron 50.0%
TAGATAGGGATATGGGGGGA+GGG + chr1_2:6512794-6512813 Msa0052300:intron 50.0%
TGGTCACTGTCCAACAGCTT+TGG + chr1_2:6513578-6513597 Msa0052300:CDS 50.0%
CTTAGGCTCCACCACAAAAG+AGG + chr1_2:6514025-6514044 Msa0052300:CDS 50.0%
! AGGACAGCGTTTTCTGAGCA+TGG + chr1_2:6514061-6514080 Msa0052300:CDS 50.0%
TTGCATCAGTACACGAAGGC+CGG + chr1_2:6514700-6514719 Msa0052300:intron 50.0%
TCTCCTCCTGAAGGTGATTG+GGG + chr1_2:6514886-6514905 Msa0052300:intron 50.0%
GAAGGACACGTGTTCATGGA+AGG + chr1_2:6514916-6514935 Msa0052300:intron 50.0%
GCCTATGCACCTAGCAAAGA+GGG - chr1_2:6514999-6515018 None:intergenic 50.0%
TGCCTATGCACCTAGCAAAG+AGG - chr1_2:6515000-6515019 None:intergenic 50.0%
!! AAAGAAGCACCTGACTGCAC+GGG + chr1_2:6515028-6515047 Msa0052300:intron 50.0%
! GCTTTTAGTCTCGGGCCTTT+GGG - chr1_2:6515097-6515116 None:intergenic 50.0%
! AGCTTTTAGTCTCGGGCCTT+TGG - chr1_2:6515098-6515117 None:intergenic 50.0%
TGAAGCTAAACTTGGGAGGC+AGG + chr1_2:6515783-6515802 Msa0052300:intron 50.0%
AACTTGGGAGGCAGGAGATT+TGG + chr1_2:6515791-6515810 Msa0052300:intron 50.0%
GTGGGCCTCTTCAAACAGAA+CGG + chr1_2:6516426-6516445 Msa0052300:intron 50.0%
TGGGCCTCTTCAAACAGAAC+GGG + chr1_2:6516427-6516446 Msa0052300:intron 50.0%
GTCTCCCGTTCTGTTTGAAG+AGG - chr1_2:6516434-6516453 None:intergenic 50.0%
!! GAGAACAACAGGGTGTTGCT+TGG + chr1_2:6516490-6516509 Msa0052300:intron 50.0%
! GTTGCTTGGGTTGCACATAC+TGG + chr1_2:6516504-6516523 Msa0052300:intron 50.0%
GGGTTGCACATACTGGAGAA+AGG + chr1_2:6516511-6516530 Msa0052300:intron 50.0%
GTCACTATTGTGGTGTGAGG+GGG + chr1_2:6516536-6516555 Msa0052300:intron 50.0%
TCACTATTGTGGTGTGAGGG+GGG + chr1_2:6516537-6516556 Msa0052300:intron 50.0%
! TTCTGGGTTCGAGCAGGTTT+TGG + chr1_2:6516573-6516592 Msa0052300:intron 50.0%
! TCTGGGTTCGAGCAGGTTTT+GGG + chr1_2:6516574-6516593 Msa0052300:intron 50.0%
! GATCCTCTTAGTGTCGTTGC+TGG + chr1_2:6516602-6516621 Msa0052300:intron 50.0%
GCTGCCTTCATTGCAGTCTT+TGG - chr1_2:6516739-6516758 None:intergenic 50.0%
CAGCCAAGAGAGCTGAATGA+AGG + chr1_2:6516755-6516774 Msa0052300:intron 50.0%
! GCTCAAGGAGGATGCTGATT+TGG + chr1_2:6516849-6516868 Msa0052300:CDS 50.0%
TTGGCTGCACTTGAAGTGGA+AGG + chr1_2:6516901-6516920 Msa0052300:CDS 50.0%
AGTGGAAGGAGCAAGTGAGA+AGG + chr1_2:6516915-6516934 Msa0052300:CDS 50.0%
AAGTGAGAAGGCGAAGAGGA+TGG + chr1_2:6516927-6516946 Msa0052300:CDS 50.0%
AAGAGGATGGTAGAGTGGAC+AGG + chr1_2:6516940-6516959 Msa0052300:intron 50.0%
ACAGGTGGTAGTCTAGGAGT+GGG + chr1_2:6516958-6516977 Msa0052300:intron 50.0%
TAGGAGTGGGAGAGAATGTG+TGG + chr1_2:6516971-6516990 Msa0052300:intron 50.0%
TTAACAAGGACCCCTCACTG+CGG + chr1_2:6517710-6517729 Msa0052300:CDS 50.0%
CTCGCTCACTAATGCTTCAC+CGG + chr1_2:6517768-6517787 Msa0052300:CDS 50.0%
TGTGATTCCTAGGATCTCCG+AGG + chr1_2:6517912-6517931 Msa0052300:CDS 50.0%
TCAAGTTCCTCGGAGATCCT+AGG - chr1_2:6517922-6517941 None:intergenic 50.0%
TGATGGCTTACAGAGTCCCT+AGG - chr1_2:6518174-6518193 None:intergenic 50.0%
ATTGCTGACAGCTCCACTAG+AGG - chr1_2:6518325-6518344 None:intergenic 50.0%
TGGAGCTGTCAGCAATGTTC+TGG + chr1_2:6518329-6518348 Msa0052300:CDS 50.0%
! TTGCTGCTTCTAGGCAGCTA+TGG + chr1_2:6518445-6518464 Msa0052300:CDS 50.0%
! TGCTGCTTCTAGGCAGCTAT+GGG + chr1_2:6518446-6518465 Msa0052300:CDS 50.0%
! TGGATGTGGGACTTGGTAGT+AGG + chr1_2:6518655-6518674 Msa0052300:CDS 50.0%
! GGATGTGGGACTTGGTAGTA+GGG + chr1_2:6518656-6518675 Msa0052300:CDS 50.0%
! GATGTGGGACTTGGTAGTAG+GGG + chr1_2:6518657-6518676 Msa0052300:CDS 50.0%
!! GCAGTGAATGGTGTTGCAGT+TGG + chr1_2:6518681-6518700 Msa0052300:CDS 50.0%
TGTTTCCAGTCAATGGGCCA+AGG + chr1_2:6518731-6518750 Msa0052300:CDS 50.0%
TCTCAGATGCAACATGACGG+AGG - chr1_2:6518868-6518887 None:intergenic 50.0%
CCATGTAAAGCTCGAGCATG+AGG - chr1_2:6519038-6519057 None:intergenic 50.0%
CCTCATGCTCGAGCTTTACA+TGG + chr1_2:6519035-6519054 Msa0052300:CDS 50.0%
AGGAACTGGGAGCTACTATG+AGG - chr1_2:6519245-6519264 None:intergenic 50.0%
GCTCATCATCTGTGAGGAAC+TGG - chr1_2:6519259-6519278 None:intergenic 50.0%
TGCTTGTGTCAACCGTGCAA+TGG - chr1_2:6519321-6519340 None:intergenic 50.0%
AAGAATCTGCGTGGTTGTCC+AGG + chr1_2:6519407-6519426 Msa0052300:CDS 50.0%
CGTTCAAGATCAGCTGAGTG+TGG - chr1_2:6520034-6520053 None:intergenic 50.0%
GGAACAGCATTCTGATTCCC+TGG - chr1_2:6520190-6520209 None:intergenic 50.0%
! AGCTCCATAGCACGGTTTTC+AGG - chr1_2:6520226-6520245 None:intergenic 50.0%
GCTGAGAATCGTAGTAGTGG+AGG + chr1_2:6520265-6520284 Msa0052300:CDS 50.0%
AGAGAGATGCCAGAAGTTGG+AGG + chr1_2:6520334-6520353 Msa0052300:CDS 50.0%
AGATGCCAGAAGTTGGAGGA+AGG + chr1_2:6520338-6520357 Msa0052300:CDS 50.0%
GGTTTCCTTCCTCCAACTTC+TGG - chr1_2:6520346-6520365 None:intergenic 50.0%
GTTGGAGGAAGGAAACCTGA+TGG + chr1_2:6520349-6520368 Msa0052300:CDS 50.0%
GGAACATTTCCTGGTGCAGA+AGG - chr1_2:6520497-6520516 None:intergenic 50.0%
TGTGCTCCAGAGTATGCATG+TGG - chr1_2:6520518-6520537 None:intergenic 50.0%
!! CATGCATACTCTGGAGCACA+TGG + chr1_2:6520518-6520537 Msa0052300:CDS 50.0%
!! TGTTGTGGTGGTGGAATGGA+AGG - chr1_2:6520545-6520564 None:intergenic 50.0%
ACATAAACAGGGCGGGTGAA+AGG - chr1_2:6520581-6520600 None:intergenic 50.0%
TGGAGGAACATAAACAGGGC+GGG - chr1_2:6520588-6520607 None:intergenic 50.0%
CAATTGAGGGAGGAATCTGC+TGG - chr1_2:6520766-6520785 None:intergenic 50.0%
GGAGGTGGCAAGGATGATAA+GGG - chr1_2:6520797-6520816 None:intergenic 50.0%
AGGAGGTGGCAAGGATGATA+AGG - chr1_2:6520798-6520817 None:intergenic 50.0%
TGAGAAGGAGGATGTGGATG+AGG - chr1_2:6520839-6520858 None:intergenic 50.0%
GGCCATCTGCAACAGAAACA+AGG - chr1_2:6521310-6521329 None:intergenic 50.0%
! ACAAGGCTTTGGTAAGGCAG+TGG + chr1_2:6522014-6522033 Msa0052300:intron 50.0%
GGCAATGCCACTGGTAATTG+TGG + chr1_2:6522486-6522505 Msa0052300:intron 50.0%
GGAGACCAGTGTTTAACTGC+TGG + chr1_2:6522989-6523008 Msa0052300:CDS 50.0%
AGGATGTTCGACGGAGGTCA+TGG - chr1_2:6511802-6511821 None:intergenic 55.0%
AGACAACGGCGGAGTAGGTA+GGG - chr1_2:6511901-6511920 None:intergenic 55.0%
TCTTGAGACAACGGCGGAGT+AGG - chr1_2:6511906-6511925 None:intergenic 55.0%
GCTCTCATCGCATCTTCGAG+AGG + chr1_2:6512053-6512072 Msa0052300:CDS 55.0%
GTGATACACGAGTCACCTGG+AGG + chr1_2:6512725-6512744 Msa0052300:intron 55.0%
AGATAGGGATATGGGGGGAG+GGG + chr1_2:6512795-6512814 Msa0052300:intron 55.0%
GGACAGTGACCAGCATATCG+AGG - chr1_2:6513570-6513589 None:intergenic 55.0%
GATGCGGCTTCCAAAGCTGT+TGG - chr1_2:6513591-6513610 None:intergenic 55.0%
CTCCTCCTGAAGGTGATTGG+GGG + chr1_2:6514887-6514906 Msa0052300:intron 55.0%
TCCTGAAGGTGATTGGGGGA+GGG + chr1_2:6514891-6514910 Msa0052300:intron 55.0%
GGGTGAAGGACACGTGTTCA+TGG + chr1_2:6514912-6514931 Msa0052300:intron 55.0%
GCCCTCTTTGCTAGGTGCAT+AGG + chr1_2:6514995-6515014 Msa0052300:intron 55.0%
GTGCTTTGGCAGTGCAATGG+CGG + chr1_2:6516315-6516334 Msa0052300:intron 55.0%
CACTATTGTGGTGTGAGGGG+GGG + chr1_2:6516538-6516557 Msa0052300:intron 55.0%
GGGGCATGGTGTGATCTTCT+GGG + chr1_2:6516557-6516576 Msa0052300:intron 55.0%
GTGATCTTCTGGGTTCGAGC+AGG + chr1_2:6516567-6516586 Msa0052300:intron 55.0%
! CTGGGTTCGAGCAGGTTTTG+GGG + chr1_2:6516575-6516594 Msa0052300:intron 55.0%
GAATGAAGGTGATAGGCCCG+TGG + chr1_2:6516769-6516788 Msa0052300:intron 55.0%
GAGCAAGTGAGAAGGCGAAG+AGG + chr1_2:6516923-6516942 Msa0052300:CDS 55.0%
AGGCGAAGAGGATGGTAGAG+TGG + chr1_2:6516935-6516954 Msa0052300:intron 55.0%
AGGATGGTAGAGTGGACAGG+TGG + chr1_2:6516943-6516962 Msa0052300:intron 55.0%
GAGTGGACAGGTGGTAGTCT+AGG + chr1_2:6516952-6516971 Msa0052300:intron 55.0%
GACAGGTGGTAGTCTAGGAG+TGG + chr1_2:6516957-6516976 Msa0052300:intron 55.0%
TGGGAGAGAATGTGTGGCGA+AGG + chr1_2:6516977-6516996 Msa0052300:intron 55.0%
GGGAGAGAATGTGTGGCGAA+GGG + chr1_2:6516978-6516997 Msa0052300:intron 55.0%
! AGGGAGATTTCTCTGGCTCG+AGG + chr1_2:6517090-6517109 Msa0052300:intron 55.0%
! GGGAGATTTCTCTGGCTCGA+GGG + chr1_2:6517091-6517110 Msa0052300:intron 55.0%
AGAGTCCACTTCCGCAGTGA+GGG - chr1_2:6517724-6517743 None:intergenic 55.0%
!! TGGAGGGGTATCAAGGTCTG+TGG + chr1_2:6518107-6518126 Msa0052300:CDS 55.0%
!! GGAGGGGTATCAAGGTCTGT+GGG + chr1_2:6518108-6518127 Msa0052300:CDS 55.0%
!! AGGTCTGTGGGCGTTGAGAA+AGG + chr1_2:6518120-6518139 Msa0052300:CDS 55.0%
GCTTACAGAGTCCCTAGGTG+TGG - chr1_2:6518169-6518188 None:intergenic 55.0%
GCTTCTAGGCAGCTATGGGT+AGG + chr1_2:6518450-6518469 Msa0052300:CDS 55.0%
GCAGCTATGGGTAGGTTGTG+TGG + chr1_2:6518458-6518477 Msa0052300:CDS 55.0%
AAAGCTCGACACTGTGCACC+TGG + chr1_2:6518606-6518625 Msa0052300:CDS 55.0%
! GGTAGTAGGGGTGCAGTGAA+TGG + chr1_2:6518669-6518688 Msa0052300:CDS 55.0%
CTCATCCTTGGCCCATTGAC+TGG - chr1_2:6518739-6518758 None:intergenic 55.0%
TGACGGAGGCAGCTTCTTCA+GGG - chr1_2:6518854-6518873 None:intergenic 55.0%
! ATGACGGAGGCAGCTTCTTC+AGG - chr1_2:6518855-6518874 None:intergenic 55.0%
AGTTGCTGACCTTGAGGTCC+AGG - chr1_2:6519004-6519023 None:intergenic 55.0%
CAGCAGAGTTGCTGACCTTG+AGG - chr1_2:6519010-6519029 None:intergenic 55.0%
CTCAAGGTCAGCAACTCTGC+TGG + chr1_2:6519008-6519027 Msa0052300:CDS 55.0%
TTGTTCGACTGCTGTCGGCA+GGG - chr1_2:6519064-6519083 None:intergenic 55.0%
CAGTGCCATCCAACACTCTG+TGG + chr1_2:6519210-6519229 Msa0052300:CDS 55.0%
GGGAGACAAGCTCCATAGCA+CGG - chr1_2:6520234-6520253 None:intergenic 55.0%
TCACTGGATCCTCGTCAAGG+AGG + chr1_2:6520385-6520404 Msa0052300:CDS 55.0%
AATGGAGTCCCTTCTGCACC+AGG + chr1_2:6520485-6520504 Msa0052300:intron 55.0%
GGATCCCATTGGCCATTTGG+AGG - chr1_2:6520605-6520624 None:intergenic 55.0%
TGGGGATCCCATTGGCCATT+TGG - chr1_2:6520608-6520627 None:intergenic 55.0%
AATGGCCAATGGGATCCCCA+TGG + chr1_2:6520608-6520627 Msa0052300:CDS 55.0%
! GGTGGTGGTACAATTGAGGG+AGG - chr1_2:6520776-6520795 None:intergenic 55.0%
GGCAAGGATGATAAGGGTGG+TGG - chr1_2:6520791-6520810 None:intergenic 55.0%
GGTGGCAAGGATGATAAGGG+TGG - chr1_2:6520794-6520813 None:intergenic 55.0%
GGATGAGGAGGTGGCATTTC+AGG - chr1_2:6520824-6520843 None:intergenic 55.0%
GAAGGAGGATGTGGATGAGG+AGG - chr1_2:6520836-6520855 None:intergenic 55.0%
TCAGGTAGAGGTGGCTGAGA+AGG - chr1_2:6520854-6520873 None:intergenic 55.0%
GGTTGTGTCTCAGGTAGAGG+TGG - chr1_2:6520863-6520882 None:intergenic 55.0%
! ACTGGTTCTTGGACAGGCAG+CGG - chr1_2:6520938-6520957 None:intergenic 55.0%
AAGGCAGGGAACATCCCCAA+AGG - chr1_2:6521425-6521444 None:intergenic 55.0%
! AGGCTTTGGTAAGGCAGTGG+TGG + chr1_2:6522017-6522036 Msa0052300:intron 55.0%
! TGGTAAGGCAGTGGTGGAGA+AGG + chr1_2:6522023-6522042 Msa0052300:intron 55.0%
CCTCTCGCGAGTTCCTTATC+AGG - chr1_2:6522264-6522283 None:intergenic 55.0%
CCTGATAAGGAACTCGCGAG+AGG + chr1_2:6522261-6522280 Msa0052300:intron 55.0%
GAACGCAGGCTTGCCAGAAA+TGG + chr1_2:6522283-6522302 Msa0052300:intron 55.0%
ACAGCGGCCACAATTACCAG+TGG - chr1_2:6522496-6522515 None:intergenic 55.0%
ACCACTGCAACAGGCAACAG+CGG - chr1_2:6522512-6522531 None:intergenic 55.0%
GTCAGACTCAGGGAATGGCA+GGG - chr1_2:6522703-6522722 None:intergenic 55.0%
AGTCAGACTCAGGGAATGGC+AGG - chr1_2:6522704-6522723 None:intergenic 55.0%
TTCGACGGAGGTCATGGCAG+TGG - chr1_2:6511796-6511815 None:intergenic 60.0%
ACCGTCGCAATCGCCACAAC+CGG + chr1_2:6511851-6511870 Msa0052300:CDS 60.0%
TCCGGTTGTGGCGATTGCGA+CGG - chr1_2:6511855-6511874 None:intergenic 60.0%
GAGACAACGGCGGAGTAGGT+AGG - chr1_2:6511902-6511921 None:intergenic 60.0%
TGCTCAGCAGACATGCCTCC+AGG - chr1_2:6512743-6512762 None:intergenic 60.0%
GATAGGGATATGGGGGGAGG+GGG + chr1_2:6512796-6512815 Msa0052300:intron 60.0%
CTCCCCCAATCACCTTCAGG+AGG - chr1_2:6514892-6514911 None:intergenic 60.0%
CTCCTGAAGGTGATTGGGGG+AGG + chr1_2:6514890-6514909 Msa0052300:intron 60.0%
CCTGAAGGTGATTGGGGGAG+GGG + chr1_2:6514892-6514911 Msa0052300:intron 60.0%
AGTTGGACTCCCGTGCAGTC+AGG - chr1_2:6515040-6515059 None:intergenic 60.0%
TGAGGCCCAGAAGCTGGAAG+TGG + chr1_2:6516263-6516282 Msa0052300:intron 60.0%
TGGGGCCACTTCCAGCTTCT+GGG - chr1_2:6516271-6516290 None:intergenic 60.0%
AAGCTGGAAGTGGCCCCAGT+CGG + chr1_2:6516273-6516292 Msa0052300:intron 60.0%
ATCCCTACATGGGCCGACTG+GGG - chr1_2:6516289-6516308 None:intergenic 60.0%
CATCCCTACATGGGCCGACT+GGG - chr1_2:6516290-6516309 None:intergenic 60.0%
TCATCCCTACATGGGCCGAC+TGG - chr1_2:6516291-6516310 None:intergenic 60.0%
! GGCAGTGCAATGGCGGAGAT+CGG + chr1_2:6516322-6516341 Msa0052300:intron 60.0%
! TGCAATGGCGGAGATCGGCA+AGG + chr1_2:6516327-6516346 Msa0052300:CDS 60.0%
! AATGGCGGAGATCGGCAAGG+TGG + chr1_2:6516330-6516349 Msa0052300:CDS 60.0%
CAGAACGGGAGACACCAACG+AGG + chr1_2:6516441-6516460 Msa0052300:intron 60.0%
! GGGGGCATGGTGTGATCTTC+TGG + chr1_2:6516556-6516575 Msa0052300:intron 60.0%
CTCCTGTACACTCGAGCCAC+GGG - chr1_2:6516788-6516807 None:intergenic 60.0%
CCTCCTGTACACTCGAGCCA+CGG - chr1_2:6516789-6516808 None:intergenic 60.0%
TGGCTCGAGTGTACAGGAGG+AGG + chr1_2:6516789-6516808 Msa0052300:intron 60.0%
GGCTCGAGTGTACAGGAGGA+GGG + chr1_2:6516790-6516809 Msa0052300:intron 60.0%
GTGTGGCGAAGGGAAGAGAG+AGG + chr1_2:6516988-6517007 Msa0052300:intron 60.0%
GAGTCCACTTCCGCAGTGAG+GGG - chr1_2:6517723-6517742 None:intergenic 60.0%
CAGAGTCCACTTCCGCAGTG+AGG - chr1_2:6517725-6517744 None:intergenic 60.0%
CCACTAGAGGACCTCGACAG+AGG - chr1_2:6518312-6518331 None:intergenic 60.0%
CCTCTGTCGAGGTCCTCTAG+TGG + chr1_2:6518309-6518328 Msa0052300:CDS 60.0%
CTTGAGGTCCAGGTGAGCAG+GGG - chr1_2:6518994-6519013 None:intergenic 60.0%
CCTTGAGGTCCAGGTGAGCA+GGG - chr1_2:6518995-6519014 None:intergenic 60.0%
ACCTTGAGGTCCAGGTGAGC+AGG - chr1_2:6518996-6519015 None:intergenic 60.0%
CTTGTTCGACTGCTGTCGGC+AGG - chr1_2:6519065-6519084 None:intergenic 60.0%
TTGCGCTTCTTCCACGCGTG+AGG + chr1_2:6519181-6519200 Msa0052300:CDS 60.0%
CACTGCATCTTCCTCACGCG+TGG - chr1_2:6519195-6519214 None:intergenic 60.0%
TTCAGGCTGAGGAGGTGGCA+AGG - chr1_2:6520807-6520826 None:intergenic 60.0%
GGCATTTCAGGCTGAGGAGG+TGG - chr1_2:6520812-6520831 None:intergenic 60.0%
GGTGGCATTTCAGGCTGAGG+AGG - chr1_2:6520815-6520834 None:intergenic 60.0%
GGAGGTGGCATTTCAGGCTG+AGG - chr1_2:6520818-6520837 None:intergenic 60.0%
GGAGGATGTGGATGAGGAGG+TGG - chr1_2:6520833-6520852 None:intergenic 60.0%
GGTGGCTGAGAAGGAGGATG+TGG - chr1_2:6520845-6520864 None:intergenic 60.0%
GGTAGAGGTGGCTGAGAAGG+AGG - chr1_2:6520851-6520870 None:intergenic 60.0%
GGGGGTTGTGTCTCAGGTAG+AGG - chr1_2:6520866-6520885 None:intergenic 60.0%
ACCTGAGACACAACCCCCCT+TGG + chr1_2:6520868-6520887 Msa0052300:CDS 60.0%
ACCAAGGGGGGTTGTGTCTC+AGG - chr1_2:6520872-6520891 None:intergenic 60.0%
AGGAGGTGGAGGAACCAAGG+GGG - chr1_2:6520885-6520904 None:intergenic 60.0%
GAGGAGGTGGAGGAACCAAG+GGG - chr1_2:6520886-6520905 None:intergenic 60.0%
GGAGGAGGTGGAGGAACCAA+GGG - chr1_2:6520887-6520906 None:intergenic 60.0%
TGGAGGAGGTGGAGGAACCA+AGG - chr1_2:6520888-6520907 None:intergenic 60.0%
CCCTGCCACTGATACTGCAG+CGG - chr1_2:6520983-6521002 None:intergenic 60.0%
CCGCTGCAGTATCAGTGGCA+GGG + chr1_2:6520980-6520999 Msa0052300:intron 60.0%
!! GTGGTGGTGGTGGTGGAGAG+TGG - chr1_2:6511777-6511796 None:intergenic 65.0%
!! CATGGCAGTGGTGGTGGTGG+TGG - chr1_2:6511784-6511803 None:intergenic 65.0%
!! GGTCATGGCAGTGGTGGTGG+TGG - chr1_2:6511787-6511806 None:intergenic 65.0%
GGAGGTCATGGCAGTGGTGG+TGG - chr1_2:6511790-6511809 None:intergenic 65.0%
GACGGAGGTCATGGCAGTGG+TGG - chr1_2:6511793-6511812 None:intergenic 65.0%
GGTTGTGGCGATTGCGACGG+TGG - chr1_2:6511852-6511871 None:intergenic 65.0%
CCCCTCCCCCAATCACCTTC+AGG - chr1_2:6514895-6514914 None:intergenic 65.0%
GGTGATTGGGGGAGGGGTGA+AGG + chr1_2:6514898-6514917 Msa0052300:intron 65.0%
CAGTCGTGAGGCCCAGAAGC+TGG + chr1_2:6516257-6516276 Msa0052300:intron 65.0%
CTGGGGCCACTTCCAGCTTC+TGG - chr1_2:6516272-6516291 None:intergenic 65.0%
TTGTGGTGTGAGGGGGGGCA+TGG + chr1_2:6516543-6516562 Msa0052300:intron 65.0%
CCGTGGCTCGAGTGTACAGG+AGG + chr1_2:6516786-6516805 Msa0052300:intron 65.0%
AGGACCCCTCACTGCGGAAG+TGG + chr1_2:6517716-6517735 Msa0052300:CDS 65.0%
CCCTGCTCACCTGGACCTCA+AGG + chr1_2:6518992-6519011 Msa0052300:CDS 65.0%
GGAGGTGGAGGAACCAAGGG+GGG - chr1_2:6520884-6520903 None:intergenic 65.0%
GTTCCTCCACCTCCTCCACC+TGG + chr1_2:6520890-6520909 Msa0052300:CDS 65.0%
GAACCAGGTGGAGGAGGTGG+AGG - chr1_2:6520896-6520915 None:intergenic 65.0%
GGAGAACCAGGTGGAGGAGG+TGG - chr1_2:6520899-6520918 None:intergenic 65.0%
GGAGGAGAACCAGGTGGAGG+AGG - chr1_2:6520902-6520921 None:intergenic 65.0%
GGTGGAGGAGAACCAGGTGG+AGG - chr1_2:6520905-6520924 None:intergenic 65.0%
GGAGGTGGAGGAGAACCAGG+TGG - chr1_2:6520908-6520927 None:intergenic 65.0%
GGAGGAGGTGGAGGAGAACC+AGG - chr1_2:6520911-6520930 None:intergenic 65.0%
TCTTGGACAGGCAGCGGAGG+AGG - chr1_2:6520932-6520951 None:intergenic 65.0%
GGTTCTTGGACAGGCAGCGG+AGG - chr1_2:6520935-6520954 None:intergenic 65.0%
GGCAGCCGCTGCAGTATCAG+TGG + chr1_2:6520975-6520994 Msa0052300:intron 65.0%
GCCGCTGCAGTATCAGTGGC+AGG + chr1_2:6520979-6520998 Msa0052300:intron 65.0%
GGAACTCGCGAGAGGAACGC+AGG + chr1_2:6522269-6522288 Msa0052300:intron 65.0%
GCCGCTGTTGCCTGTTGCAG+TGG + chr1_2:6522508-6522527 Msa0052300:intron 65.0%
ATGGGGGGAGGGGGTTGAGC+TGG + chr1_2:6512805-6512824 Msa0052300:intron 70.0%
TGGGGGGAGGGGGTTGAGCT+GGG + chr1_2:6512806-6512825 Msa0052300:intron 70.0%
TGGCCCCAGTCGGCCCATGT+AGG + chr1_2:6516283-6516302 Msa0052300:intron 70.0%
GGCCCCAGTCGGCCCATGTA+GGG + chr1_2:6516284-6516303 Msa0052300:intron 70.0%
GGCCCGTGGCTCGAGTGTAC+AGG + chr1_2:6516783-6516802 Msa0052300:intron 70.0%
AGGTGAGCAGGGGCGGGCAA+AGG - chr1_2:6518984-6519003 None:intergenic 70.0%
TTTGCCCGCCCCTGCTCACC+TGG + chr1_2:6518983-6519002 Msa0052300:CDS 70.0%
AGGTCCAGGTGAGCAGGGGC+GGG - chr1_2:6518990-6519009 None:intergenic 70.0%
GAGGTCCAGGTGAGCAGGGG+CGG - chr1_2:6518991-6519010 None:intergenic 70.0%
AGCGGAGGAGGAGGAGGTGG+AGG - chr1_2:6520920-6520939 None:intergenic 70.0%
ACAGGCAGCGGAGGAGGAGG+AGG - chr1_2:6520926-6520945 None:intergenic 70.0%
TGGACAGGCAGCGGAGGAGG+AGG - chr1_2:6520929-6520948 None:intergenic 70.0%
GGCAGCGGAGGAGGAGGAGG+TGG - chr1_2:6520923-6520942 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 6511632 6523015 6511632 ID=Msa0052300;Name=Msa0052300
chr1_2 mRNA 6511632 6523015 6511632 ID=Msa0052300-mRNA-1;Parent=Msa0052300;Name=Msa0052300-mRNA-1;_AED=0.12;_eAED=0.12;_QI=70|0.36|0.5|0.66|0.90|1|12|0|1334
chr1_2 exon 6511632 6512074 6511632 ID=Msa0052300-mRNA-1:exon:2131;Parent=Msa0052300-mRNA-1
chr1_2 exon 6512235 6512330 6512235 ID=Msa0052300-mRNA-1:exon:2132;Parent=Msa0052300-mRNA-1
chr1_2 exon 6513529 6514262 6513529 ID=Msa0052300-mRNA-1:exon:2133;Parent=Msa0052300-mRNA-1
chr1_2 exon 6516327 6516425 6516327 ID=Msa0052300-mRNA-1:exon:2134;Parent=Msa0052300-mRNA-1
chr1_2 exon 6516805 6516948 6516805 ID=Msa0052300-mRNA-1:exon:2135;Parent=Msa0052300-mRNA-1
chr1_2 exon 6517706 6517967 6517706 ID=Msa0052300-mRNA-1:exon:2136;Parent=Msa0052300-mRNA-1
chr1_2 exon 6518091 6519453 6518091 ID=Msa0052300-mRNA-1:exon:2137;Parent=Msa0052300-mRNA-1
chr1_2 exon 6520183 6520406 6520183 ID=Msa0052300-mRNA-1:exon:2138;Parent=Msa0052300-mRNA-1
chr1_2 exon 6520507 6520987 6520507 ID=Msa0052300-mRNA-1:exon:2139;Parent=Msa0052300-mRNA-1
chr1_2 exon 6521324 6521405 6521324 ID=Msa0052300-mRNA-1:exon:2140;Parent=Msa0052300-mRNA-1
chr1_2 exon 6522748 6522795 6522748 ID=Msa0052300-mRNA-1:exon:2141;Parent=Msa0052300-mRNA-1
chr1_2 exon 6522917 6523015 6522917 ID=Msa0052300-mRNA-1:exon:2142;Parent=Msa0052300-mRNA-1
chr1_2 five_prime_UTR 6511632 6511701 6511632 ID=Msa0052300-mRNA-1:five_prime_utr;Parent=Msa0052300-mRNA-1
chr1_2 CDS 6511702 6512074 6511702 ID=Msa0052300-mRNA-1:cds;Parent=Msa0052300-mRNA-1
chr1_2 CDS 6512235 6512330 6512235 ID=Msa0052300-mRNA-1:cds;Parent=Msa0052300-mRNA-1
chr1_2 CDS 6513529 6514262 6513529 ID=Msa0052300-mRNA-1:cds;Parent=Msa0052300-mRNA-1
chr1_2 CDS 6516327 6516425 6516327 ID=Msa0052300-mRNA-1:cds;Parent=Msa0052300-mRNA-1
chr1_2 CDS 6516805 6516948 6516805 ID=Msa0052300-mRNA-1:cds;Parent=Msa0052300-mRNA-1
chr1_2 CDS 6517706 6517967 6517706 ID=Msa0052300-mRNA-1:cds;Parent=Msa0052300-mRNA-1
chr1_2 CDS 6518091 6519453 6518091 ID=Msa0052300-mRNA-1:cds;Parent=Msa0052300-mRNA-1
chr1_2 CDS 6520183 6520406 6520183 ID=Msa0052300-mRNA-1:cds;Parent=Msa0052300-mRNA-1
chr1_2 CDS 6520507 6520987 6520507 ID=Msa0052300-mRNA-1:cds;Parent=Msa0052300-mRNA-1
chr1_2 CDS 6521324 6521405 6521324 ID=Msa0052300-mRNA-1:cds;Parent=Msa0052300-mRNA-1
chr1_2 CDS 6522748 6522795 6522748 ID=Msa0052300-mRNA-1:cds;Parent=Msa0052300-mRNA-1
chr1_2 CDS 6522917 6523015 6522917 ID=Msa0052300-mRNA-1:cds;Parent=Msa0052300-mRNA-1
Gene Sequence

>Msa0052300

ATGGAGGGGGAGAATCTTCTTAACACAACAAAACTCAAACGACAACATACAGAAACCACCGTAACAAACTCACCACTCTCCACCACCACCACCACTGCCATGACCTCCGTCGAACATCCTCTAAAAAAGCGAAAGCTCTACGATTCTCCACCGTCGCAATCGCCACAACCGGAAACTAGCTCTCACTTTCTGCAAACCCTACCTACTCCGCCGTTGTCTCAAGATGAAATTCTCGCGAAACGCAGAAACAAAGACGCAATTCGAAACCTCTATGAAGGTTACAAGCGAATTAAACGTTGCATCCTTCAGAAACAATCTTCCTCCATACCTGATCTTGATCAGAATTTTCTTGCTCTCATCGCATCTTCGAGAGAATTGAAAACCATGGAGGAATCGTTTGTGCATGGAATTTCACTAGGTTCTGTTGTTTGTTTGCCTCAAAATGTAGTTTCTGTAATTGATTGCTGTGGTTGTACGAGTGTACAAAGAATTGTGGCCGATTTAATTCCTCGATATGCTGGTCACTGTCCAACAGCTTTGGAAGCCGCATCCAAAGTCATTATCAATATGCATAACTGGAGTTTGGCATTGACTAGTAAGGAAGAGGATTCCAATGGTATTGCATTTGAAACTGCTAAAGCATGTATTTTCGGATTGGCTGATATTTGCTGCATTGCTTCTTCAGTAGCACCAACATCAGCTGTAATTAGAGGAATTCGCTCAACAGTTTTTCAAAATGTGCTCACCTTTTTTGTTGCCTTATTTGAGGGAAATGATGTCTTAAAGATGATTGACAAGAATTTCCTGAATATGCAAGATAATCCCGAGGTCTTTTCTGAATTGAAAGAAAAGGTTTTAGATGAAGATGATTCTTCATTGACTAAATTGTCTAAGTTCCGTGCATTATGTATACTTAGGGTATTCTTCTCTTGTCCAAAAGAATTGCTTGCAGCTTGTTTGGAACTCTTAGGCTCCACCACAAAAGAGGGATCTTCTAACGAAGGACAGCGTTTTCTGAGCATGGTGACTAGCATGCTTAATTATGATGAAGCAGTTCACCTTTTGGGTAGAGCAAATGATGGACCTAAATCATGTAACGATTCTATTGAGGAAGGCATCAAAGAGATTGAGGTTGGCGAGAAAGCTGTCACCAATGACAACCATATCTCCGATGCGATTCAAAAGAGCTGTTTGCTTATGCTGTGCAATGGCGGAGATCGGCAAGGTGGTATTGAAAACAATGAGAGGAACAAGAATATATGGGATTCAAATGATCCAGGAAAAAAGGAGCTCATATCGAAGGAGGAGGGAGTGAATGAGAAAGAGAGTCCAGTTGTAGATAATGAGCTCAAGGAGGATGCTGATTTGGAAGTGAATGGCCCAATTAATCAGTGTGTTTTGGCTGCACTTGAAGTGGAAGGAGCAAGTGAGAAGGCGAAGAGGATGGTTCTTAACAAGGACCCCTCACTGCGGAAGTGGACTCTGCGCCGATGTAAGAAGTTGCTTGACTCGCTCACTAATGCTTCACCGGAAACTACATCAGTATTGCAAGGAATTCTTGGAATGTTCGCTCAACAGACAGAGTTAGAAGACTGTCAAGTAGATAGTGATGAAGATAAGTCCGATTCTTCAATCTTCACGAATAGAAACTATGTGATTCCTAGGATCTCCGAGGAACTTGAAAATATTGGTGAAAGATCACAAAAAGGTTCGCACTTTGATAATGGAGGGGTATCAAGGTCTGTGGGCGTTGAGAAAGGTGATATACCCCATGTTAGATGTTCCACACCTAGGGACTCTGTAAGCCATCAGATGTTCTCACCTACAGTTAGAACAGCAGTAGACTTTAGGAGTAATTCATTTGATGGTAGAAATGAATTCCCAAATGTTGAGAAAAATCAAGTTTCAAATATAAATTTCAATTCACCTCTGTCGAGGTCCTCTAGTGGAGCTGTCAGCAATGTTCTGGCTTCTCCCAATCATCGTTTTATGTCACCAACTTCTTTAACCAAAAGTCAAATTGTTTTGTGCTTTGACGGGGATCCTGCTGCTGTAGATATTGTTGCTGCTTCTAGGCAGCTATGGGTAGGTTGTGTGGCACCTGACATGCCTGAAAGCCATATTAGGTTTCAAATAGAGAGGTTTGGTCCTATTGAAAAGTTTATATTCTTCCCATCGAATGGATTTGCTTTAGTTGAGTACAGAAGGATAATGGACGCAATAAAAGCTCGACACTGTGCACCTGGAAATTTTCCTTGCCGTGTAAAATTCATGGATGTGGGACTTGGTAGTAGGGGTGCAGTGAATGGTGTTGCAGTTGGCTCTAGTTCTCATATTTATGTTGGAAATGTTTCCAGTCAATGGGCCAAGGATGAGATTCTCCATGAATCAAGGAAAGTAGTTTATAAGGGTCCTCTCGCTGTGATTGATCTTAGCTTTGAGTGTGCGTTGCTTATGGAGTTTGAAAGCCCTGAAGAAGCTGCCTCCGTCATGTTGCATCTGAGACAGCTCCGAAGAGAAAGAAGTAGTTATAGCCCACATTTTGGTCCAGGAACAGTTAATGTTGTAAGTGGGCATGGTTATATGGATGGTGCAAGACCTTTGCCCGCCCCTGCTCACCTGGACCTCAAGGTCAGCAACTCTGCTGGATCACCTCATGCTCGAGCTTTACATGGGAGCCCTGCCGACAGCAGTCGAACAAGAATGTCTCACTTGTGTAACATACTAGCTTCATTGCGTGCAAAGTATAATATTAATCAAAACATAGGTCTCCATGATAATTATATGACTGGAAATAGTTGCGCTTCTTCCACGCGTGAGGAAGATGCAGTGCCATCCAACACTCTGTGGATAACAATTCCTCATAGTAGCTCCCAGTTCCTCACAGATGATGAGCTAATGAGTATTTGCAACCTTGCTATTGGAAACTCTGGTTCCATTGCACGGTTGACACAAGCAAAAATGCAAATGGGATGTGGTTGGTTTGTTGAATGTAGTAATGTTGACGGAGCAGTTACAGTCTTAAAGAATCTGCGTGGTTGTCCAGGACTGTTTTTCCAAATAGAATTCAGCAATCCAGGGAATCAGAATGCTGTTCCATTTGCAATTAAACCTGAAAACCGTGCTATGGAGCTTGTCTCCCCTAGAATGAATGCTGAGAATCGTAGTAGTGGAGGACATGGCGCACCTCTGTCTCAATCAAACTGGCACTTCCCTGATTCAAGAGAGATGCCAGAAGTTGGAGGAAGGAAACCTGATGGTTATGATCATTTATCACTGGATCCTCGTCAAGGAGGAAATGTTCCACATGCATACTCTGGAGCACATGGACCTTCCATTCCACCACCACAACAAATTCAGTCATCTCCTTTCACCCGCCCTGTTTATGTTCCTCCAAATGGCCAATGGGATCCCCATGGAATAAACAATCAGTTACCTGTGAACCAATACCAAACTGTTGTAATGCCAAATAATTTTAATGGCAGTCCTTTTATACCTGTTTCAGTAACTCCACTTGCTCAAATACAGGGAACTCCAATGCAACCGTATAACCAGCAGATTCCTCCCTCAATTGTACCACCACCCTTATCATCCTTGCCACCTCCTCAGCCTGAAATGCCACCTCCTCATCCACATCCTCCTTCTCAGCCACCTCTACCTGAGACACAACCCCCCTTGGTTCCTCCACCTCCTCCACCTGGTTCTCCTCCACCTCCTCCTCCTCCGCTGCCTGTCCAAGAACCAGTCAATATGGAATGTTCGGGGCAGCCGCTGCAATGGCCCACCAAATTAGACATGACTAAACGCACAGATTTTAAACATGTGCAATCAACATTTGCTGCTACTCCATCTCATAGAAGGGAAGTGTGCCGTTTAATCCCATCTTCCACAAGTGAAGACAGAAGGGAGCTGCAAAATTATCTTGCAAGTTACTTGTTGTCATATGTTTTTGATGAATCTTGTTCTGAGCAAGGAATGGGAGACCAGTGTTTAACTGCTGGCTGA
Protein sequence

>Msa0052300

MEGENLLNTTKLKRQHTETTVTNSPLSTTTTTAMTSVEHPLKKRKLYDSPPSQSPQPETSSHFLQTLPTPPLSQDEILAKRRNKDAIRNLYEGYKRIKRCILQKQSSSIPDLDQNFLALIASSRELKTMEESFVHGISLGSVVCLPQNVVSVIDCCGCTSVQRIVADLIPRYAGHCPTALEAASKVIINMHNWSLALTSKEEDSNGIAFETAKACIFGLADICCIASSVAPTSAVIRGIRSTVFQNVLTFFVALFEGNDVLKMIDKNFLNMQDNPEVFSELKEKVLDEDDSSLTKLSKFRALCILRVFFSCPKELLAACLELLGSTTKEGSSNEGQRFLSMVTSMLNYDEAVHLLGRANDGPKSCNDSIEEGIKEIEVGEKAVTNDNHISDAIQKSCLLMLCNGGDRQGGIENNERNKNIWDSNDPGKKELISKEEGVNEKESPVVDNELKEDADLEVNGPINQCVLAALEVEGASEKAKRMVLNKDPSLRKWTLRRCKKLLDSLTNASPETTSVLQGILGMFAQQTELEDCQVDSDEDKSDSSIFTNRNYVIPRISEELENIGERSQKGSHFDNGGVSRSVGVEKGDIPHVRCSTPRDSVSHQMFSPTVRTAVDFRSNSFDGRNEFPNVEKNQVSNINFNSPLSRSSSGAVSNVLASPNHRFMSPTSLTKSQIVLCFDGDPAAVDIVAASRQLWVGCVAPDMPESHIRFQIERFGPIEKFIFFPSNGFALVEYRRIMDAIKARHCAPGNFPCRVKFMDVGLGSRGAVNGVAVGSSSHIYVGNVSSQWAKDEILHESRKVVYKGPLAVIDLSFECALLMEFESPEEAASVMLHLRQLRRERSSYSPHFGPGTVNVVSGHGYMDGARPLPAPAHLDLKVSNSAGSPHARALHGSPADSSRTRMSHLCNILASLRAKYNINQNIGLHDNYMTGNSCASSTREEDAVPSNTLWITIPHSSSQFLTDDELMSICNLAIGNSGSIARLTQAKMQMGCGWFVECSNVDGAVTVLKNLRGCPGLFFQIEFSNPGNQNAVPFAIKPENRAMELVSPRMNAENRSSGGHGAPLSQSNWHFPDSREMPEVGGRKPDGYDHLSLDPRQGGNVPHAYSGAHGPSIPPPQQIQSSPFTRPVYVPPNGQWDPHGINNQLPVNQYQTVVMPNNFNGSPFIPVSVTPLAQIQGTPMQPYNQQIPPSIVPPPLSSLPPPQPEMPPPHPHPPSQPPLPETQPPLVPPPPPPGSPPPPPPPLPVQEPVNMECSGQPLQWPTKLDMTKRTDFKHVQSTFAATPSHRREVCRLIPSSTSEDRRELQNYLASYLLSYVFDESCSEQGMGDQCLTAG*