AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0648510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0648510 MtrunA17_Chr4g0039971 96.812 345 11 0 1 345 2 346 0.0 693
Msa0648510 MtrunA17_Chr5g0395281 52.571 350 110 10 1 345 1 299 1.46e-110 324
Msa0648510 MtrunA17_Chr5g0410961 45.706 361 153 9 1 345 1 334 3.85e-90 273
Msa0648510 MtrunA17_Chr3g0115821 49.226 323 122 11 1 295 1 309 3.05e-89 271
Msa0648510 MtrunA17_Chr6g0453471 57.000 200 82 2 1 197 1 199 1.54e-76 239
Msa0648510 MtrunA17_Chr4g0048511 71.429 140 39 1 1 139 1 140 5.98e-74 233
Msa0648510 MtrunA17_Chr2g0281071 74.615 130 32 1 1 129 1 130 1.32e-72 229
Msa0648510 MtrunA17_Chr2g0323411 43.175 315 132 6 1 312 1 271 1.68e-72 228
Msa0648510 MtrunA17_Chr7g0217741 61.176 170 55 3 1 169 1 160 2.19e-71 224
Msa0648510 MtrunA17_Chr4g0042671 72.727 132 36 0 1 132 1 132 4.14e-71 227
Msa0648510 MtrunA17_Chr8g0349261 76.923 130 28 2 1 128 1 130 1.06e-70 222
Msa0648510 MtrunA17_Chr5g0434571 72.656 128 35 0 1 128 37 164 9.29e-67 214
Msa0648510 MtrunA17_Chr3g0110351 72.441 127 35 0 1 127 1 127 8.38e-66 210
Msa0648510 MtrunA17_Chr4g0037141 67.969 128 41 0 1 128 1 128 3.82e-65 207
Msa0648510 MtrunA17_Chr4g0057031 69.531 128 39 0 1 128 1 128 1.05e-64 206
Msa0648510 MtrunA17_Chr1g0187761 76.271 118 28 0 1 118 1 118 1.10e-64 205
Msa0648510 MtrunA17_Chr7g0261281 76.271 118 28 0 1 118 1 118 1.12e-64 206
Msa0648510 MtrunA17_Chr1g0203411 74.576 118 30 0 1 118 1 118 3.14e-64 205
Msa0648510 MtrunA17_Chr1g0167691 75.214 117 29 0 1 117 1 117 5.26e-63 201
Msa0648510 MtrunA17_Chr3g0131121 68.504 127 40 0 1 127 1 127 6.70e-63 202
Msa0648510 MtrunA17_Chr7g0274581 71.552 116 33 0 1 116 1 116 8.80e-63 199
Msa0648510 MtrunA17_Chr7g0228891 58.857 175 61 3 1 171 1 168 1.26e-62 201
Msa0648510 MtrunA17_Chr7g0270891 68.750 128 40 0 1 128 1 128 1.71e-62 203
Msa0648510 MtrunA17_Chr1g0193371 67.969 128 41 0 1 128 1 128 4.94e-62 202
Msa0648510 MtrunA17_Chr8g0385321 66.406 128 43 0 1 128 1 128 1.86e-61 199
Msa0648510 MtrunA17_Chr1g0193801 67.188 128 42 0 1 128 1 128 1.91e-61 201
Msa0648510 MtrunA17_Chr6g0452271 57.047 149 64 0 1 149 1 149 2.97e-61 199
Msa0648510 MtrunA17_Chr1g0167661 73.504 117 31 0 1 117 1 117 3.89e-61 196
Msa0648510 MtrunA17_Chr3g0103281 61.111 144 53 1 1 144 1 141 8.65e-61 197
Msa0648510 MtrunA17_Chr4g0068061 71.552 116 33 0 1 116 1 116 2.27e-60 197
Msa0648510 MtrunA17_Chr3g0121241 66.935 124 41 0 5 128 35 158 4.91e-60 195
Msa0648510 MtrunA17_Chr4g0058631 65.625 128 44 0 1 128 1 128 6.16e-60 196
Msa0648510 MtrunA17_Chr7g0217221 71.552 116 33 0 1 116 1 116 6.62e-60 193
Msa0648510 MtrunA17_Chr3g0117091 62.406 133 50 0 1 133 1 133 5.95e-59 193
Msa0648510 MtrunA17_Chr2g0309911 65.289 121 42 0 6 126 5 125 2.30e-58 191
Msa0648510 MtrunA17_Chr4g0060721 68.966 116 36 0 1 116 2 117 4.41e-58 191
Msa0648510 MtrunA17_Chr5g0435101 60.800 125 49 0 3 127 2 126 6.55e-58 186
Msa0648510 MtrunA17_Chr7g0254411 68.000 125 38 1 1 123 1 125 6.85e-58 190
Msa0648510 MtrunA17_Chr1g0211161 60.741 135 53 0 3 137 4 138 6.96e-58 187
Msa0648510 MtrunA17_Chr3g0092401 67.227 119 39 0 1 119 2 120 1.81e-57 188
Msa0648510 MtrunA17_Chr7g0275911 68.103 116 37 0 1 116 1 116 2.04e-57 187
Msa0648510 MtrunA17_Chr7g0271241 67.969 128 41 0 1 128 1 128 2.23e-57 190
Msa0648510 MtrunA17_Chr8g0346561 68.966 116 36 0 1 116 1 116 6.24e-57 187
Msa0648510 MtrunA17_Chr4g0070611 68.103 116 37 0 1 116 1 116 1.38e-55 184
Msa0648510 MtrunA17_Chr2g0311221 71.818 110 31 0 2 111 4 113 1.39e-55 184
Msa0648510 MtrunA17_Chr6g0453211 69.369 111 34 0 1 111 1 111 2.31e-55 183
Msa0648510 MtrunA17_Chr4g0070641 68.103 116 37 0 1 116 1 116 2.80e-55 178
Msa0648510 MtrunA17_Chr5g0417821 63.866 119 43 0 11 129 6 124 1.32e-54 180
Msa0648510 MtrunA17_Chr2g0330041 60.000 125 50 0 1 125 1 125 6.77e-54 182
Msa0648510 MtrunA17_Chr2g0323351 63.559 118 43 0 1 118 1 118 1.09e-53 177
Msa0648510 MtrunA17_Chr4g0028311 54.194 155 64 3 1 154 1 149 1.15e-53 179
Msa0648510 MtrunA17_Chr1g0194951 60.769 130 51 0 1 130 1 130 2.25e-53 179
Msa0648510 MtrunA17_Chr1g0151941 60.465 129 48 2 1 126 1 129 2.27e-53 176
Msa0648510 MtrunA17_Chr8g0342521 59.350 123 50 0 1 123 1 123 9.23e-53 177
Msa0648510 MtrunA17_Chr8g0387421 62.069 116 44 0 1 116 1 116 4.86e-52 175
Msa0648510 MtrunA17_Chr8g0342541 58.537 123 51 0 1 123 1 123 5.81e-52 175
Msa0648510 MtrunA17_Chr7g0264641 56.028 141 58 3 1 140 1 138 6.32e-52 173
Msa0648510 MtrunA17_Chr4g0022931 53.378 148 53 3 1 147 1 133 7.50e-52 173
Msa0648510 MtrunA17_Chr3g0135311 47.895 190 78 4 1 189 1 170 1.41e-51 174
Msa0648510 MtrunA17_Chr4g0044421 61.600 125 47 1 3 126 2 126 1.53e-51 169
Msa0648510 MtrunA17_Chr4g0022901 62.712 118 43 1 1 117 1 118 6.50e-51 170
Msa0648510 MtrunA17_Chr4g0022911 61.864 118 44 1 1 117 1 118 8.68e-51 171
Msa0648510 MtrunA17_Chr5g0397231 47.423 194 96 5 1 191 1 191 9.46e-51 172
Msa0648510 MtrunA17_Chr2g0327351 64.865 111 38 1 1 110 1 111 1.48e-50 171
Msa0648510 MtrunA17_Chr5g0400821 62.712 118 43 1 1 117 1 118 1.55e-50 171
Msa0648510 MtrunA17_Chr1g0152011 62.712 118 43 1 1 117 1 118 1.78e-50 171
Msa0648510 MtrunA17_Chr7g0269831 68.103 116 37 0 1 116 1 116 4.72e-50 171
Msa0648510 MtrunA17_Chr4g0022881 62.281 114 43 0 1 114 1 114 1.70e-49 165
Msa0648510 MtrunA17_Chr4g0022891 63.717 113 41 0 1 113 1 113 2.49e-48 162
Msa0648510 MtrunA17_Chr8g0342481 57.627 118 49 1 1 117 1 118 6.61e-47 164
Msa0648510 MtrunA17_Chr1g0186061 62.037 108 41 0 8 115 16 123 1.75e-46 158
Msa0648510 MtrunA17_Chr4g0072751 62.162 111 41 1 1 110 1 111 2.37e-46 160
Msa0648510 MtrunA17_Chr1g0203441 65.385 104 36 0 13 116 14 117 3.02e-46 158
Msa0648510 MtrunA17_Chr1g0168661 60.909 110 43 0 6 115 15 124 3.16e-46 157
Msa0648510 MtrunA17_Chr4g0054391 60.909 110 42 1 1 109 1 110 3.92e-46 159
Msa0648510 MtrunA17_Chr6g0450101 58.678 121 48 1 1 119 1 121 4.23e-46 156
Msa0648510 MtrunA17_Chr6g0487491 47.253 182 80 4 1 166 1 182 4.99e-46 157
Msa0648510 MtrunA17_Chr4g0032401 56.250 128 49 1 12 132 17 144 5.41e-46 159
Msa0648510 MtrunA17_Chr7g0247131 77.907 86 19 0 43 128 9 94 7.83e-46 157
Msa0648510 MtrunA17_Chr4g0042611 72.727 88 24 0 1 88 1 88 1.64e-45 150
Msa0648510 MtrunA17_Chr7g0228231 63.551 107 39 0 12 118 14 120 2.64e-45 154
Msa0648510 MtrunA17_Chr1g0209661 44.828 174 81 3 8 167 23 195 4.61e-45 156
Msa0648510 MtrunA17_Chr5g0395231 39.273 275 129 11 78 345 5 248 4.94e-45 154
Msa0648510 MtrunA17_Chr2g0328771 61.905 105 40 0 12 116 20 124 6.22e-45 156
Msa0648510 MtrunA17_Chr8g0354661 66.346 104 35 0 12 115 37 140 1.14e-44 160
Msa0648510 MtrunA17_Chr3g0099131 61.468 109 42 0 10 118 39 147 2.07e-44 159
Msa0648510 MtrunA17_Chr3g0088461 61.468 109 42 0 8 116 18 126 1.16e-43 153
Msa0648510 MtrunA17_Chr6g0470971 59.821 112 45 0 4 115 6 117 1.64e-43 151
Msa0648510 MtrunA17_Chr1g0194291 50.336 149 69 2 8 154 17 162 1.82e-43 150
Msa0648510 MtrunA17_Chr4g0055981 59.649 114 46 0 12 125 55 168 1.99e-43 149
Msa0648510 MtrunA17_Chr1g0154031 63.462 104 38 0 12 115 76 179 2.15e-43 154
Msa0648510 MtrunA17_Chr3g0080861 61.538 104 40 0 12 115 37 140 3.04e-43 156
Msa0648510 MtrunA17_Chr7g0240821 63.000 100 37 0 17 116 6 105 1.60e-42 147
Msa0648510 MtrunA17_Chr5g0395221 72.727 88 24 0 1 88 1 88 1.87e-41 140
Msa0648510 MtrunA17_Chr1g0194301 53.913 115 53 0 8 122 29 143 1.96e-41 146
Msa0648510 MtrunA17_Chr2g0322521 64.151 106 38 0 10 115 27 132 5.58e-41 147
Msa0648510 MtrunA17_Chr5g0434911 54.054 111 51 0 7 117 16 126 2.07e-40 143
Msa0648510 MtrunA17_Chr5g0434931 54.955 111 50 0 11 121 34 144 2.23e-40 143
Msa0648510 MtrunA17_Chr2g0294811 68.182 88 28 0 1 88 1 88 5.50e-40 137
Msa0648510 MtrunA17_Chr7g0220341 44.509 173 73 3 11 160 24 196 6.86e-40 142
Msa0648510 MtrunA17_Chr8g0343831 56.897 116 46 1 1 116 1 112 1.39e-39 140
Msa0648510 MtrunA17_Chr5g0434831 57.009 107 46 0 11 117 6 112 4.19e-39 137
Msa0648510 MtrunA17_Chr7g0228991 57.009 107 46 0 11 117 28 134 6.47e-39 139
Msa0648510 MtrunA17_Chr2g0293911 56.522 115 50 0 8 122 20 134 1.47e-38 139
Msa0648510 MtrunA17_Chr4g0068921 55.652 115 51 0 8 122 20 134 5.12e-38 134
Msa0648510 MtrunA17_Chr1g0180391 57.143 105 45 0 12 116 19 123 1.05e-37 135
Msa0648510 MtrunA17_Chr5g0434841 57.009 107 46 0 11 117 19 125 1.42e-37 137
Msa0648510 MtrunA17_Chr8g0360111 55.882 102 45 0 11 112 24 125 5.05e-37 134
Msa0648510 MtrunA17_Chr5g0440781 50.413 121 58 2 13 132 13 132 9.00e-37 131
Msa0648510 MtrunA17_Chr2g0327821 54.808 104 47 0 12 115 6 109 1.10e-36 132
Msa0648510 MtrunA17_Chr5g0440761 50.413 121 58 2 13 132 13 132 4.27e-36 131
Msa0648510 MtrunA17_Chr5g0441141 50.413 121 58 2 13 132 13 132 4.94e-36 131
Msa0648510 MtrunA17_Chr1g0192411 53.509 114 52 1 8 121 8 120 8.59e-36 134
Msa0648510 MtrunA17_Chr3g0099141 60.920 87 34 0 8 94 36 122 4.55e-35 125
Msa0648510 MtrunA17_Chr8g0342511 57.471 87 37 0 1 87 1 87 4.88e-35 123
Msa0648510 MtrunA17_Chr4g0030881 51.327 113 48 1 13 118 8 120 5.23e-35 128
Msa0648510 MtrunA17_Chr8g0334881 50.926 108 52 1 8 114 6 113 2.23e-34 128
Msa0648510 MtrunA17_Chr8g0342531 55.056 89 40 0 1 89 1 89 4.56e-34 123
Msa0648510 MtrunA17_Chr2g0323321 57.609 92 38 1 1 92 1 91 8.80e-34 120
Msa0648510 MtrunA17_Chr5g0441131 41.358 162 87 4 13 172 10 165 1.36e-32 120
Msa0648510 MtrunA17_Chr4g0013361 50.000 104 51 1 12 114 10 113 2.27e-32 122
Msa0648510 MtrunA17_Chr4g0008551 51.754 114 48 3 14 126 38 145 1.07e-31 122
Msa0648510 MtrunA17_Chr8g0342461 53.333 90 41 1 1 89 1 90 2.91e-31 115
Msa0648510 MtrunA17_Chr6g0454921 51.786 112 51 2 14 124 15 124 7.79e-31 116
Msa0648510 MtrunA17_Chr8g0342471 53.333 90 41 1 1 89 1 90 1.02e-30 113
Msa0648510 MtrunA17_Chr3g0093811 59.302 86 35 0 43 128 13 98 1.76e-30 116
Msa0648510 MtrunA17_Chr5g0401731 51.818 110 50 2 14 122 15 122 2.60e-30 117
Msa0648510 MtrunA17_Chr3g0133601 49.020 102 51 1 14 115 37 137 3.71e-28 109
Msa0648510 MtrunA17_Chr7g0238631 54.717 106 45 2 12 116 111 214 4.18e-28 114
Msa0648510 MtrunA17_Chr5g0429661 48.571 105 51 2 12 115 120 222 1.01e-27 111
Msa0648510 MtrunA17_Chr4g0053431 50.000 106 44 2 14 115 5 105 1.18e-27 109
Msa0648510 MtrunA17_Chr4g0058991 49.524 105 50 2 12 115 207 309 3.37e-27 111
Msa0648510 MtrunA17_Chr7g0229101 63.380 71 26 0 43 113 3 73 8.22e-27 105
Msa0648510 MtrunA17_Chr3g0139671 47.170 106 53 2 12 116 83 186 8.42e-26 108
Msa0648510 MtrunA17_Chr3g0139671 30.769 156 100 4 14 163 33 186 5.63e-16 79.3
Msa0648510 MtrunA17_Chr1g0157731 47.170 106 53 2 12 116 89 192 1.98e-25 107
Msa0648510 MtrunA17_Chr1g0157731 27.128 188 131 3 14 196 39 225 1.00e-13 72.4
Msa0648510 MtrunA17_Chr3g0117511 47.573 103 51 2 14 115 183 283 3.71e-25 105
Msa0648510 MtrunA17_Chr7g0229131 56.000 75 33 0 43 117 3 77 4.06e-25 99.8
Msa0648510 MtrunA17_Chr5g0434901 57.746 71 30 0 43 113 4 74 2.26e-24 96.3
Msa0648510 MtrunA17_Chr7g0228531 47.059 102 52 2 14 115 220 319 2.44e-24 102
Msa0648510 MtrunA17_Chr6g0480581 46.078 102 52 2 14 114 4 103 3.08e-24 99.4
Msa0648510 MtrunA17_Chr5g0437321 49.533 107 50 3 8 112 12 116 1.05e-23 99.0
Msa0648510 MtrunA17_Chr6g0453751 50.000 92 37 2 11 93 19 110 7.83e-23 92.4
Msa0648510 MtrunA17_Chr4g0042501 44.340 106 56 2 14 118 105 208 1.45e-22 97.8
Msa0648510 MtrunA17_Chr5g0425591 50.000 82 40 1 13 93 10 91 2.70e-22 89.7
Msa0648510 MtrunA17_Chr5g0417621 43.636 110 59 2 10 118 130 237 3.60e-22 97.1
Msa0648510 MtrunA17_Chr5g0397841 46.939 98 51 1 12 109 108 204 6.32e-22 96.3
Msa0648510 MtrunA17_Chr6g0460661 44.898 98 51 2 14 110 16 111 5.69e-21 88.6
Msa0648510 MtrunA17_Chr7g0247141 72.340 47 12 1 1 46 1 47 1.86e-20 84.0
Msa0648510 MtrunA17_Chr1g0177901 47.126 87 45 1 24 110 4 89 2.25e-20 88.2
Msa0648510 MtrunA17_Chr7g0228481 44.330 97 52 2 14 110 220 314 2.33e-20 91.7
Msa0648510 MtrunA17_Chr3g0125801 44.037 109 58 2 8 115 10 116 2.53e-20 89.7
Msa0648510 MtrunA17_Chr7g0238651 40.594 101 58 1 17 115 10 110 5.21e-20 89.7
Msa0648510 MtrunA17_Chr7g0233061 45.361 97 50 3 14 110 180 273 1.98e-19 88.2
Msa0648510 MtrunA17_Chr6g0460671 37.288 118 70 3 14 130 99 213 2.09e-19 87.8
Msa0648510 MtrunA17_Chr7g0228401 46.512 86 45 1 25 110 290 374 2.77e-19 88.6
Msa0648510 MtrunA17_Chr7g0254261 41.748 103 57 2 14 115 89 189 1.23e-17 82.8
Msa0648510 MtrunA17_Chr4g0042621 71.111 45 13 0 88 132 14 58 1.04e-16 80.1
Msa0648510 MtrunA17_Chr5g0416341 38.384 99 60 1 17 115 29 126 6.85e-16 78.6
Msa0648510 MtrunA17_Chr1g0193901 48.810 84 41 2 12 93 11 94 2.64e-15 71.2
Msa0648510 MtrunA17_Chr1g0193891 48.810 84 41 2 12 93 11 94 2.64e-15 71.2
Msa0648510 MtrunA17_Chr1g0193871 48.810 84 41 2 12 93 11 94 2.64e-15 71.2
Msa0648510 MtrunA17_Chr1g0193881 48.810 84 41 2 12 93 11 94 2.64e-15 71.2
Msa0648510 MtrunA17_Chr3g0145551 75.676 37 9 0 92 128 2 38 1.83e-14 68.2
Msa0648510 MtrunA17_Chr8g0362231 36.364 99 62 1 17 115 25 122 2.98e-14 73.6
Msa0648510 MtrunA17_Chr5g0434871 59.091 44 18 0 74 117 2 45 2.42e-13 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0648510 AT5G16770.4 49.721 358 134 9 1 345 1 325 1.79e-101 302
Msa0648510 AT5G16770.3 49.721 358 134 9 1 345 1 325 1.79e-101 302
Msa0648510 AT5G16770.1 49.721 358 134 9 1 345 1 325 4.50e-101 301
Msa0648510 AT5G16770.2 49.721 358 134 9 1 345 1 325 4.50e-101 301
Msa0648510 AT3G02940.2 49.020 357 123 8 1 345 1 310 4.86e-98 293
Msa0648510 AT3G02940.1 49.020 357 123 8 1 345 1 310 9.33e-98 292
Msa0648510 AT3G02940.3 49.020 357 123 8 1 345 1 310 9.33e-98 292
Msa0648510 AT5G10280.1 63.776 196 57 5 1 188 1 190 2.42e-85 261
Msa0648510 AT1G34670.1 65.445 191 54 4 1 187 1 183 3.42e-83 257
Msa0648510 AT4G17785.1 40.811 370 173 8 1 345 1 349 1.59e-82 255
Msa0648510 AT4G17785.2 41.274 361 184 7 1 345 1 349 5.48e-82 253
Msa0648510 AT5G65230.1 64.865 185 56 3 1 180 1 181 6.52e-80 246
Msa0648510 AT4G21440.1 69.799 149 41 1 1 149 1 145 9.56e-77 240
Msa0648510 AT3G61250.1 80.469 128 25 0 1 128 1 128 1.05e-76 238
Msa0648510 AT3G01140.2 63.905 169 53 3 1 169 1 161 1.32e-74 234
Msa0648510 AT5G15310.4 75.969 129 31 0 1 129 1 129 2.31e-74 230
Msa0648510 AT5G15310.2 45.556 270 132 6 1 258 1 267 3.80e-74 232
Msa0648510 AT5G15310.1 62.722 169 55 2 1 169 1 161 3.95e-74 232
Msa0648510 AT4G05100.1 73.846 130 33 1 1 129 1 130 2.28e-72 228
Msa0648510 AT4G28110.1 72.868 129 35 0 1 129 1 129 2.04e-71 224
Msa0648510 AT3G01140.1 60.920 174 65 2 4 177 47 217 2.76e-71 227
Msa0648510 AT5G54230.1 64.596 161 57 0 1 161 1 161 5.23e-68 216
Msa0648510 AT1G66230.1 71.875 128 36 0 1 128 1 128 7.02e-67 212
Msa0648510 AT4G22680.1 72.656 128 35 0 1 128 1 128 1.61e-66 211
Msa0648510 AT5G16600.1 71.875 128 36 0 1 128 1 128 6.27e-66 211
Msa0648510 AT1G22640.1 68.504 127 40 0 1 127 1 127 1.01e-65 208
Msa0648510 AT4G12350.1 71.094 128 37 0 1 128 1 128 2.94e-65 208
Msa0648510 AT4G09460.1 69.291 127 39 0 1 127 1 127 8.75e-65 205
Msa0648510 AT5G61420.2 67.969 128 41 0 1 128 1 128 1.67e-64 209
Msa0648510 AT4G38620.1 67.969 128 41 0 1 128 1 128 2.45e-64 206
Msa0648510 AT1G18570.1 69.531 128 38 1 1 127 1 128 6.75e-64 207
Msa0648510 AT2G31180.1 75.862 116 28 0 1 116 1 116 1.05e-63 203
Msa0648510 AT5G07690.1 67.969 128 41 0 1 128 1 128 1.78e-63 205
Msa0648510 AT3G23250.1 75.862 116 28 0 1 116 1 116 1.82e-63 203
Msa0648510 AT5G60890.1 67.188 128 42 0 1 128 1 128 2.59e-63 203
Msa0648510 AT1G35515.1 67.460 126 41 0 1 126 1 126 3.38e-63 200
Msa0648510 AT2G16720.1 67.717 127 41 0 1 127 1 127 3.66e-63 202
Msa0648510 AT1G06180.1 76.724 116 27 0 1 116 1 116 4.49e-63 201
Msa0648510 AT4G34990.1 67.969 128 41 0 1 128 1 128 1.10e-62 201
Msa0648510 AT1G57560.1 65.625 128 44 0 1 128 1 128 3.11e-62 201
Msa0648510 AT5G26660.1 66.923 130 43 0 1 130 1 130 3.41e-62 202
Msa0648510 AT1G57560.2 65.625 128 44 0 1 128 1 128 4.39e-62 199
Msa0648510 AT5G07700.1 66.406 128 43 0 1 128 1 128 2.07e-61 200
Msa0648510 AT5G07700.2 66.406 128 43 0 1 128 1 128 2.07e-61 200
Msa0648510 AT3G13540.1 68.000 125 40 0 4 128 15 139 2.61e-61 197
Msa0648510 AT1G74080.1 64.885 131 46 0 1 131 1 131 3.43e-61 199
Msa0648510 AT1G09540.1 67.188 128 42 0 1 128 1 128 8.57e-61 199
Msa0648510 AT5G62320.1 65.414 133 39 1 2 127 3 135 2.87e-60 194
Msa0648510 AT5G56110.1 64.844 128 45 0 1 128 1 128 1.08e-59 195
Msa0648510 AT5G14340.1 67.188 128 42 0 1 128 13 140 1.56e-59 193
Msa0648510 AT3G47600.1 69.748 119 36 0 1 119 1 119 1.75e-59 195
Msa0648510 AT5G62470.2 68.908 119 37 0 1 119 1 119 2.08e-59 195
Msa0648510 AT4G01680.3 66.142 127 43 0 1 127 1 127 1.68e-58 189
Msa0648510 AT1G08810.1 56.970 165 63 3 1 165 1 157 3.67e-58 190
Msa0648510 AT1G56160.1 70.435 115 34 0 2 116 4 118 6.13e-58 189
Msa0648510 AT4G01680.1 66.142 127 43 0 1 127 1 127 6.93e-58 191
Msa0648510 AT5G62470.1 68.908 119 36 1 1 119 1 118 9.80e-58 191
Msa0648510 AT3G28910.1 68.033 122 39 0 1 122 1 122 1.29e-57 189
Msa0648510 AT1G79180.1 70.085 117 35 0 2 118 4 120 1.54e-57 189
Msa0648510 AT3G12720.1 65.289 121 42 0 6 126 16 136 1.85e-57 189
Msa0648510 AT1G74650.1 68.908 119 37 0 1 119 1 119 3.06e-57 189
Msa0648510 AT2G47460.1 68.966 116 36 0 1 116 1 116 2.83e-56 187
Msa0648510 AT1G16490.1 68.696 115 36 0 2 116 4 118 1.99e-55 182
Msa0648510 AT5G49330.1 67.241 116 38 0 1 116 1 116 2.39e-55 184
Msa0648510 AT1G74430.1 63.281 128 47 0 1 128 1 128 8.48e-55 181
Msa0648510 AT3G62610.1 68.103 116 37 0 1 116 1 116 1.78e-54 182
Msa0648510 AT4G01680.2 60.432 139 43 1 1 127 1 139 1.86e-54 182
Msa0648510 AT3G12820.1 68.966 116 36 0 3 118 5 120 5.59e-54 177
Msa0648510 AT1G18710.1 59.124 137 56 0 1 137 1 137 1.88e-53 177
Msa0648510 AT1G63910.1 55.556 135 60 0 1 135 1 135 1.52e-52 178
Msa0648510 AT3G28470.1 62.500 128 48 0 1 128 1 128 2.59e-52 176
Msa0648510 AT3G13890.2 61.538 117 45 0 1 117 1 117 3.03e-52 177
Msa0648510 AT5G23000.1 62.712 118 43 1 1 117 1 118 4.98e-52 175
Msa0648510 AT4G37780.1 62.712 118 43 1 1 117 1 118 2.62e-51 172
Msa0648510 AT5G57620.1 63.559 118 42 1 1 117 1 118 2.73e-51 174
Msa0648510 AT2G36890.1 59.542 131 52 1 1 130 1 131 3.50e-51 172
Msa0648510 AT1G79180.2 54.000 150 36 1 2 118 4 153 3.89e-51 173
Msa0648510 AT2G36890.2 60.630 127 49 1 1 126 42 168 5.18e-51 173
Msa0648510 AT5G65790.1 63.559 118 42 1 1 117 1 118 1.56e-50 172
Msa0648510 AT3G49690.1 62.712 118 43 1 1 117 1 118 8.65e-50 169
Msa0648510 AT3G13890.1 57.143 126 45 1 1 117 1 126 3.26e-49 169
Msa0648510 AT5G40350.1 61.607 112 43 0 9 120 14 125 2.95e-47 159
Msa0648510 AT3G24310.1 64.486 107 38 0 9 115 15 121 1.63e-46 159
Msa0648510 AT3G27810.1 62.727 110 41 0 9 118 17 126 2.69e-46 157
Msa0648510 AT5G14750.1 63.462 104 38 0 13 116 17 120 7.43e-46 155
Msa0648510 AT3G01530.1 61.468 109 42 0 8 116 21 129 1.57e-45 154
Msa0648510 AT4G13480.1 64.486 107 38 0 9 115 3 109 1.76e-45 156
Msa0648510 AT5G40330.1 61.111 108 42 0 9 116 9 116 1.94e-45 155
Msa0648510 AT2G32460.1 64.762 105 37 0 11 115 17 121 3.22e-45 161
Msa0648510 AT2G32460.2 64.762 105 37 0 11 115 5 109 3.51e-45 161
Msa0648510 AT3G11440.2 40.670 209 115 3 10 218 39 238 1.06e-44 159
Msa0648510 AT3G30210.1 63.462 104 38 0 11 114 26 129 2.11e-44 154
Msa0648510 AT3G11440.3 40.670 209 115 3 10 218 39 238 2.92e-44 160
Msa0648510 AT3G11440.4 40.670 209 115 3 10 218 39 238 2.92e-44 160
Msa0648510 AT3G11440.1 40.670 209 115 3 10 218 39 238 2.92e-44 160
Msa0648510 AT5G12870.1 61.111 108 42 0 12 119 18 125 1.30e-43 152
Msa0648510 AT2G26960.1 55.906 127 55 1 12 138 20 145 1.50e-43 155
Msa0648510 AT5G35550.1 63.810 105 38 0 12 116 14 118 1.58e-43 151
Msa0648510 AT5G55020.1 62.727 110 40 1 12 121 26 134 1.73e-43 157
Msa0648510 AT5G06100.1 58.333 108 45 0 8 115 28 135 1.87e-43 156
Msa0648510 AT5G06100.5 58.333 108 45 0 8 115 28 135 7.52e-43 155
Msa0648510 AT5G06100.2 58.333 108 45 0 8 115 28 135 7.52e-43 155
Msa0648510 AT5G06100.3 58.333 108 45 0 8 115 28 135 7.52e-43 155
Msa0648510 AT5G06100.4 58.333 108 45 0 8 115 28 135 7.52e-43 155
Msa0648510 AT1G48000.1 48.611 144 72 1 12 153 32 175 8.34e-43 149
Msa0648510 AT3G27920.1 59.048 105 43 0 13 117 15 119 1.74e-42 147
Msa0648510 AT5G52600.1 57.522 113 45 1 6 115 3 115 3.97e-42 145
Msa0648510 AT3G08500.1 60.952 105 41 0 12 116 30 134 2.34e-41 148
Msa0648510 AT1G25340.1 53.913 115 53 0 13 127 19 133 5.37e-41 145
Msa0648510 AT2G47190.1 53.913 115 53 0 8 122 16 130 7.94e-41 144
Msa0648510 AT4G26930.1 59.223 103 42 0 12 114 19 121 8.03e-41 147
Msa0648510 AT1G66370.1 56.522 115 46 1 1 115 1 111 1.57e-40 143
Msa0648510 AT5G52260.1 62.264 106 40 0 13 118 13 118 1.83e-40 143
Msa0648510 AT3G48920.1 59.804 102 41 0 13 114 19 120 2.33e-40 143
Msa0648510 AT4G25560.1 60.377 106 42 0 13 118 11 116 3.70e-40 143
Msa0648510 AT5G26660.2 72.093 86 24 0 45 130 14 99 5.90e-40 143
Msa0648510 AT1G68320.1 54.955 111 50 0 12 122 19 129 5.95e-40 142
Msa0648510 AT3G46130.1 57.944 107 45 0 9 115 6 112 6.53e-40 142
Msa0648510 AT5G59780.3 58.252 103 43 0 13 115 9 111 4.01e-39 139
Msa0648510 AT3G06490.1 57.391 115 49 0 8 122 15 129 1.22e-38 140
Msa0648510 AT1G66380.1 52.672 131 48 2 11 137 7 127 4.04e-38 133
Msa0648510 AT3G53200.1 57.944 107 45 0 9 115 6 112 2.09e-37 134
Msa0648510 AT5G49620.1 54.783 115 52 0 8 122 22 136 3.80e-37 135
Msa0648510 AT1G56650.1 60.000 105 42 0 11 115 7 111 1.56e-36 132
Msa0648510 AT1G25340.2 51.304 115 51 1 13 127 19 128 2.13e-36 133
Msa0648510 AT2G26950.1 45.946 148 68 2 12 147 16 163 2.18e-36 135
Msa0648510 AT1G66390.1 60.000 105 42 0 11 115 7 111 2.31e-36 132
Msa0648510 AT1G25340.3 51.304 115 51 1 13 127 19 128 4.81e-36 133
Msa0648510 AT3G60460.1 51.923 104 49 1 12 114 11 114 7.86e-35 129
Msa0648510 AT3G47600.2 73.333 75 20 0 45 119 39 113 8.40e-34 127
Msa0648510 AT5G49620.2 48.837 129 52 1 8 122 22 150 1.61e-33 126
Msa0648510 AT3G12820.2 74.648 71 18 0 48 118 2 72 1.11e-32 120
Msa0648510 AT1G22640.3 72.464 69 19 0 59 127 2 70 1.24e-31 118
Msa0648510 AT5G40350.2 65.789 76 26 0 45 120 5 80 1.40e-31 117
Msa0648510 AT1G18960.1 50.000 122 52 3 10 128 6 121 1.56e-31 120
Msa0648510 AT5G35550.2 66.667 78 26 0 39 116 44 121 2.01e-31 119
Msa0648510 AT5G14750.3 65.385 78 24 1 39 116 12 86 3.20e-31 116
Msa0648510 AT3G27810.2 66.216 74 25 0 45 118 4 77 2.23e-30 114
Msa0648510 AT3G46130.3 65.278 72 25 0 44 115 9 80 4.34e-29 112
Msa0648510 AT5G59780.2 66.197 71 24 0 45 115 20 90 7.67e-29 111
Msa0648510 AT3G46130.4 66.197 71 24 0 45 115 20 90 1.09e-28 111
Msa0648510 AT2G39880.1 53.774 106 40 2 14 115 50 150 1.27e-28 114
Msa0648510 AT3G53200.2 67.606 71 23 0 45 115 9 79 1.98e-28 110
Msa0648510 AT2G23290.1 54.369 103 44 2 14 115 13 113 3.26e-28 112
Msa0648510 AT4G18770.1 39.716 141 81 3 9 147 212 350 3.84e-28 114
Msa0648510 AT1G71030.1 53.333 90 41 1 38 127 7 95 4.49e-28 108
Msa0648510 AT4G37260.1 52.427 103 46 2 14 115 13 113 4.84e-28 112
Msa0648510 AT3G55730.1 50.000 110 46 2 14 119 56 160 5.16e-28 113
Msa0648510 AT5G02320.1 53.774 106 46 2 12 116 125 228 5.23e-28 114
Msa0648510 AT5G02320.2 53.774 106 46 2 12 116 125 228 5.23e-28 114
Msa0648510 AT5G02320.3 53.774 106 46 2 12 116 65 168 7.25e-28 114
Msa0648510 AT1G71030.2 57.143 77 33 0 51 127 5 81 8.30e-28 107
Msa0648510 AT3G09230.1 48.148 108 47 2 14 117 55 157 1.65e-27 111
Msa0648510 AT3G09370.1 50.420 119 52 3 12 125 128 244 6.32e-27 111
Msa0648510 AT3G09370.2 50.420 119 52 3 12 125 133 249 6.40e-27 111
Msa0648510 AT3G09370.3 50.420 119 52 3 12 125 141 257 8.08e-27 111
Msa0648510 AT5G58850.1 47.619 105 52 2 12 115 103 205 1.12e-26 110
Msa0648510 AT1G66380.3 64.384 73 26 0 43 115 6 78 1.51e-26 102
Msa0648510 AT3G27785.1 45.794 107 57 1 9 115 184 289 1.75e-26 109
Msa0648510 AT5G40360.1 44.762 105 56 2 12 116 156 258 3.61e-26 107
Msa0648510 AT3G50060.1 49.515 103 49 2 14 115 6 106 5.42e-26 105
Msa0648510 AT5G67300.1 50.485 103 48 2 14 115 6 106 1.27e-25 105
Msa0648510 AT3G23250.2 75.862 58 14 0 59 116 2 59 1.78e-25 102
Msa0648510 AT4G32730.5 47.170 106 53 2 12 116 85 188 2.50e-25 107
Msa0648510 AT4G32730.5 36.000 100 62 2 14 112 35 133 1.22e-14 75.9
Msa0648510 AT4G32730.4 47.170 106 53 2 12 116 85 188 2.50e-25 107
Msa0648510 AT4G32730.4 36.000 100 62 2 14 112 35 133 1.22e-14 75.9
Msa0648510 AT4G32730.3 47.170 106 53 2 12 116 85 188 2.50e-25 107
Msa0648510 AT4G32730.3 36.000 100 62 2 14 112 35 133 1.22e-14 75.9
Msa0648510 AT4G32730.2 47.170 106 53 2 12 116 85 188 2.50e-25 107
Msa0648510 AT4G32730.2 36.000 100 62 2 14 112 35 133 1.22e-14 75.9
Msa0648510 AT4G32730.1 47.170 106 53 2 12 116 85 188 2.71e-25 107
Msa0648510 AT4G32730.1 36.000 100 62 2 14 112 35 133 1.27e-14 75.5
Msa0648510 AT5G11050.1 39.850 133 62 3 14 130 105 235 5.34e-25 105
Msa0648510 AT5G11510.3 47.170 106 53 2 12 116 79 182 8.80e-25 106
Msa0648510 AT5G11510.3 34.000 100 64 2 14 112 29 127 1.27e-11 66.2
Msa0648510 AT5G11510.1 47.170 106 53 2 12 116 79 182 8.80e-25 106
Msa0648510 AT5G11510.1 34.000 100 64 2 14 112 29 127 1.27e-11 66.2
Msa0648510 AT5G11510.4 47.170 106 53 2 12 116 79 182 8.80e-25 106
Msa0648510 AT5G11510.4 34.000 100 64 2 14 112 29 127 1.27e-11 66.2
Msa0648510 AT5G11510.2 45.714 105 56 1 12 116 79 182 1.00e-24 105
Msa0648510 AT5G11510.2 34.000 100 64 2 14 112 29 127 1.03e-11 66.6
Msa0648510 AT5G11510.5 45.714 105 56 1 12 116 79 182 1.01e-24 105
Msa0648510 AT5G11510.5 34.000 100 64 2 14 112 29 127 1.06e-11 66.6
Msa0648510 AT1G17950.1 43.590 117 59 3 14 129 5 115 2.37e-23 97.4
Msa0648510 AT1G69560.1 42.342 111 61 2 9 118 102 210 1.29e-22 97.1
Msa0648510 AT1G66380.2 53.659 82 38 0 11 92 7 88 1.42e-22 91.3
Msa0648510 AT1G69560.2 42.342 111 61 2 9 118 118 226 1.43e-22 97.4
Msa0648510 AT5G14750.4 65.517 58 20 0 59 116 2 59 4.51e-22 91.3
Msa0648510 AT5G14750.2 65.517 58 20 0 59 116 2 59 4.51e-22 91.3
Msa0648510 AT1G26780.1 45.714 105 54 2 12 115 96 198 1.94e-21 92.8
Msa0648510 AT1G26780.2 45.714 105 54 2 12 115 96 198 2.67e-21 94.0
Msa0648510 AT1G73410.1 43.220 118 58 3 14 130 6 115 4.59e-21 91.3
Msa0648510 AT2G25230.1 31.000 200 122 7 9 203 21 209 1.03e-20 90.1
Msa0648510 AT1G73410.2 43.220 118 58 3 14 130 6 115 1.52e-20 88.6
Msa0648510 AT5G61420.1 75.000 48 12 0 81 128 2 49 2.79e-20 89.7
Msa0648510 AT4G33450.1 38.596 114 62 3 3 115 13 119 5.38e-20 88.2
Msa0648510 AT3G29020.1 40.000 105 62 1 14 118 65 168 9.85e-20 87.0
Msa0648510 AT3G29020.2 40.000 105 62 1 14 118 67 170 3.28e-19 87.0
Msa0648510 AT5G17800.1 41.176 102 59 1 14 115 93 193 6.37e-19 86.7
Msa0648510 AT4G00540.2 43.750 112 57 3 12 119 101 210 9.04e-19 87.0
Msa0648510 AT4G00540.1 43.750 112 57 3 12 119 99 208 1.65e-18 86.7
Msa0648510 AT2G37630.1 38.614 101 60 1 17 115 7 107 5.83e-18 84.3
Msa0648510 AT5G15310.3 76.190 42 10 0 88 129 9 50 1.14e-17 81.6
Msa0648510 AT4G28110.2 71.429 42 12 0 88 129 4 45 1.18e-16 77.8
Msa0648510 AT1G14350.2 39.394 99 59 1 17 115 28 125 1.08e-15 78.2
Msa0648510 AT1G14350.1 39.394 99 59 1 17 115 28 125 1.08e-15 78.2
Msa0648510 AT4G25560.2 69.565 46 14 0 73 118 5 50 1.68e-15 75.1
Msa0648510 AT2G02820.3 38.384 99 60 1 17 115 33 130 1.98e-15 76.6
Msa0648510 AT2G02820.2 38.384 99 60 1 17 115 33 130 2.24e-15 77.4
Msa0648510 AT2G02820.1 38.384 99 60 1 17 115 33 130 2.50e-15 77.0
Msa0648510 AT5G40430.1 37.864 103 60 3 9 110 49 148 2.76e-15 75.1
Msa0648510 AT1G22640.2 72.500 40 11 0 88 127 16 55 4.52e-15 73.2
Msa0648510 AT5G39700.1 39.583 96 57 1 15 110 57 151 2.47e-14 71.2
Msa0648510 AT1G74650.3 71.429 42 12 0 78 119 2 43 3.39e-14 72.0
Msa0648510 AT5G59780.1 60.870 46 18 0 70 115 1 46 7.26e-14 69.3
Msa0648510 AT3G46130.2 55.357 56 24 1 70 125 1 55 1.14e-13 69.3
Msa0648510 AT3G28910.2 64.444 45 16 0 78 122 2 46 2.30e-13 69.3
Msa0648510 AT5G14340.2 63.636 44 16 0 88 131 10 53 5.24e-13 67.4
Msa0648510 AT1G74430.2 50.000 52 26 0 77 128 8 59 3.57e-11 62.4

Find 65 sgRNAs with CRISPR-Local

Find 192 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATAAATTCGCTTCCGAATT+TGG 0.086404 4_3:+54980988 Msa0648510:CDS
AAGCAATGGATATCAGTTTA+TGG 0.227747 4_3:+54980871 Msa0648510:CDS
ATCAATTTGCATGCTGTTCT+TGG 0.250407 4_3:+54980000 Msa0648510:CDS
AAGGATTGGAACACTCATTT+TGG 0.251218 4_3:-54981066 None:intergenic
CAAAGCTAGCAGGATTAAAT+AGG 0.299125 4_3:+54979887 Msa0648510:CDS
ACCAATATTCTGTCCTCTTC+TGG 0.310346 4_3:-54979820 None:intergenic
TCTTTCACACCAGAACATTC+TGG 0.335500 4_3:-54981022 None:intergenic
GGATATCAGTTTATGGATAA+TGG 0.351842 4_3:+54980878 Msa0648510:CDS
AGATTGAGATGATCAATTCT+TGG 0.352637 4_3:-54980518 None:intergenic
TCGGTTTCACCAGAATGTTC+TGG 0.365345 4_3:+54981013 Msa0648510:CDS
TTCGCTTCCGAATTTGGTTT+CGG 0.370573 4_3:+54980994 Msa0648510:CDS
CTATTTAATCCTGCTAGCTT+TGG 0.375946 4_3:-54979886 None:intergenic
AGGATGTGAGCGATGCTTAT+TGG 0.376641 4_3:+54981134 Msa0648510:CDS
TTCAACTACCTTTGAAATGT+TGG 0.385318 4_3:+54981096 Msa0648510:CDS
CTGCCACTACTAATGCTCTT+AGG 0.396911 4_3:+54980606 Msa0648510:CDS
ATTTCATTATCAGTCCTTCC+TGG 0.398708 4_3:-54980425 None:intergenic
TTGCAGTTACTCAATCCATT+TGG 0.403717 4_3:+54980719 Msa0648510:CDS
TCAACTACCTTTGAAATGTT+GGG 0.413953 4_3:+54981097 Msa0648510:CDS
GTGGCAGTGTCCCAAGTGTT+TGG 0.419690 4_3:-54980590 None:intergenic
GAGCATGAATATTGGTACTA+AGG 0.425624 4_3:-54980685 None:intergenic
TGAGGTAGGAGCATGAATAT+TGG 0.426682 4_3:-54980693 None:intergenic
AGTTGAAGTTGAAGAAGGAT+TGG 0.431292 4_3:-54981080 None:intergenic
AAGGTAGTTGAAGTTGAAGA+AGG 0.434281 4_3:-54981085 None:intergenic
TCAATTTGCATGCTGTTCTT+GGG 0.435854 4_3:+54980001 Msa0648510:CDS
TTGCTTGAAGTCTGATCAAA+AGG 0.441589 4_3:+54980922 Msa0648510:CDS
AAATTCGGAAGCGAATTTAT+CGG 0.444791 4_3:-54980986 None:intergenic
ACCAGAAGAGGACAGAATAT+TGG 0.448233 4_3:+54979819 Msa0648510:CDS
GGTGAAACCGAAACCAAATT+CGG 0.449651 4_3:-54981001 None:intergenic
CTGTCCTCTTCTGGTGTCCA+AGG 0.457198 4_3:-54979811 None:intergenic
GAAGATGAAGATTGTCCAAA+TGG 0.462779 4_3:-54980734 None:intergenic
AGAAACATGGCCATGGAAGT+TGG 0.466146 4_3:+54979854 Msa0648510:CDS
ATTGAGTAACTGCAAGTTTG+AGG 0.475558 4_3:-54980711 None:intergenic
ATTCCAATTGCTTCAAAACA+TGG 0.485063 4_3:+54980649 Msa0648510:CDS
TTCTGGTGTGAAAGAGATGA+TGG 0.496083 4_3:+54981030 Msa0648510:CDS
TGCTACAAATTCTTCTTCGA+CGG 0.497348 4_3:+54980961 Msa0648510:CDS
GAAAGAGATGATGGGAAACA+AGG 0.499669 4_3:+54981039 Msa0648510:CDS
GTTGGGAGATTTCATGTATG+AGG 0.511151 4_3:+54981114 Msa0648510:CDS
TTAAGACCTGATATCAAAAG+AGG 0.513520 4_3:+54979946 Msa0648510:CDS
ATTCTTGGACGATGAGTCAC+TGG 0.516959 4_3:-54980503 None:intergenic
AGCATGAATATTGGTACTAA+GGG 0.518632 4_3:-54980684 None:intergenic
AGAGCACTTCCAAAGCTAGC+AGG 0.529780 4_3:+54979877 Msa0648510:CDS
CTTAAAACTTGCTGCATCTG+AGG 0.533236 4_3:-54980851 None:intergenic
GTGGGAAGAGTTGCAGACTA+AGG 0.536175 4_3:+54979911 Msa0648510:CDS
GAAGTGCTCTCCAACTTCCA+TGG 0.538398 4_3:-54979864 None:intergenic
TGATGAAAGTGGTTTGAAGA+AGG 0.545334 4_3:+54979786 Msa0648510:CDS
GTGGTTTGAAGAAGGGACCT+TGG 0.548378 4_3:+54979794 Msa0648510:CDS
AGTAACTGCAAGTTTGAGGT+AGG 0.567940 4_3:-54980707 None:intergenic
AAAGAGATGATGGGAAACAA+GGG 0.568405 4_3:+54981040 Msa0648510:CDS
ATTAGGTGGTCAGCTATAGC+AGG 0.569745 4_3:+54980395 Msa0648510:intron
GAAATCTCCCAACATTTCAA+AGG 0.583349 4_3:-54981104 None:intergenic
GCTATAGCAGGTCATCTACC+AGG 0.584503 4_3:+54980407 Msa0648510:CDS
TAGCAGGATTAAATAGGTGT+GGG 0.585086 4_3:+54979893 Msa0648510:CDS
CACATTAAGAAACATGGCCA+TGG 0.603080 4_3:+54979847 Msa0648510:CDS
CTAGCAGGATTAAATAGGTG+TGG 0.605242 4_3:+54979892 Msa0648510:CDS
GGAAGAGTTGCAGACTAAGG+TGG 0.621521 4_3:+54979914 Msa0648510:CDS
GCACCATGCTGTGATGAAAG+TGG 0.624729 4_3:+54979775 Msa0648510:CDS
GTGAATCACATTAAGAAACA+TGG 0.634022 4_3:+54979841 Msa0648510:CDS
GATGAAAGTGGTTTGAAGAA+GGG 0.641863 4_3:+54979787 Msa0648510:CDS
TCTGGTGTGAAAGAGATGAT+GGG 0.644119 4_3:+54981031 Msa0648510:CDS
TATCAGTTTATGGATAATGG+TGG 0.645117 4_3:+54980881 Msa0648510:CDS
TAGCAGGTCATCTACCAGGA+AGG 0.650019 4_3:+54980411 Msa0648510:CDS
AAGCCTAAGAGCATTAGTAG+TGG 0.651915 4_3:-54980609 None:intergenic
AAACCACTTTCATCACAGCA+TGG 0.662952 4_3:-54979778 None:intergenic
GGGACCTTGGACACCAGAAG+AGG 0.678796 4_3:+54979807 Msa0648510:CDS
AAGAGATGATGGGAAACAAG+GGG 0.694211 4_3:+54981041 Msa0648510:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATGAAATAAAGAATTTT+TGG + chr4_3:54980438-54980457 Msa0648510:CDS 10.0%
!!! ATAATGAAATAAAGAATTTT+TGG + chr4_3:54980438-54980457 Msa0648510:CDS 10.0%
!! TTTGTATTATTATTATTAGG+TGG + chr4_3:54980381-54980400 Msa0648510:intron 15.0%
!!! AATTTTCTAAATGAACTTTT+AGG + chr4_3:54980770-54980789 Msa0648510:CDS 15.0%
!! TTTGTATTATTATTATTAGG+TGG + chr4_3:54980381-54980400 Msa0648510:intron 15.0%
!!! AATTTTCTAAATGAACTTTT+AGG + chr4_3:54980770-54980789 Msa0648510:CDS 15.0%
!! TTAGTTAAGTTCAAATTGAT+CGG + chr4_3:54980173-54980192 Msa0648510:intron 20.0%
!! TTAGTTAAGTTCAAATTGAT+CGG + chr4_3:54980173-54980192 Msa0648510:intron 20.0%
!! AACAAAATCAGTGTTGAATT+AGG - chr4_3:54980051-54980070 None:intergenic 25.0%
! AAAGAAAAAGCTTCTTCAAA+TGG + chr4_3:54980472-54980491 Msa0648510:CDS 25.0%
! AAGAAAAAGCTTCTTCAAAT+GGG + chr4_3:54980473-54980492 Msa0648510:CDS 25.0%
!! TCAATTATTTTCCAAACACT+TGG + chr4_3:54980579-54980598 Msa0648510:CDS 25.0%
!! CAATTATTTTCCAAACACTT+GGG + chr4_3:54980580-54980599 Msa0648510:CDS 25.0%
!! AACAAAATCAGTGTTGAATT+AGG - chr4_3:54980051-54980070 None:intergenic 25.0%
! AAAGAAAAAGCTTCTTCAAA+TGG + chr4_3:54980472-54980491 Msa0648510:CDS 25.0%
! AAGAAAAAGCTTCTTCAAAT+GGG + chr4_3:54980473-54980492 Msa0648510:CDS 25.0%
!! TCAATTATTTTCCAAACACT+TGG + chr4_3:54980579-54980598 Msa0648510:CDS 25.0%
!! CAATTATTTTCCAAACACTT+GGG + chr4_3:54980580-54980599 Msa0648510:CDS 25.0%
GTGAATCACATTAAGAAACA+TGG + chr4_3:54979841-54979860 Msa0648510:CDS 30.0%
TTAAGACCTGATATCAAAAG+AGG + chr4_3:54979946-54979965 Msa0648510:CDS 30.0%
! AATTGTCCTCTTTTGATATC+AGG - chr4_3:54979955-54979974 None:intergenic 30.0%
CGATGAGATTAACATAATCA+CGG - chr4_3:54980115-54980134 None:intergenic 30.0%
CAACTTCTAACATGTATCTT+TGG - chr4_3:54980143-54980162 None:intergenic 30.0%
CAATAAAGTATATCGAACTC+GGG - chr4_3:54980207-54980226 None:intergenic 30.0%
CCAATAAAGTATATCGAACT+CGG - chr4_3:54980208-54980227 None:intergenic 30.0%
AGATTGAGATGATCAATTCT+TGG - chr4_3:54980521-54980540 None:intergenic 30.0%
!!! GTTTTGAAGCAATTGGAATT+TGG - chr4_3:54980648-54980667 None:intergenic 30.0%
ATTCCAATTGCTTCAAAACA+TGG + chr4_3:54980649-54980668 Msa0648510:CDS 30.0%
AGCATGAATATTGGTACTAA+GGG - chr4_3:54980687-54980706 None:intergenic 30.0%
!! CTGATTTTGAGAAGCATAAT+TGG - chr4_3:54980807-54980826 None:intergenic 30.0%
AAGCAATGGATATCAGTTTA+TGG + chr4_3:54980871-54980890 Msa0648510:CDS 30.0%
GGATATCAGTTTATGGATAA+TGG + chr4_3:54980878-54980897 Msa0648510:CDS 30.0%
! TATCAGTTTATGGATAATGG+TGG + chr4_3:54980881-54980900 Msa0648510:CDS 30.0%
AAATTCGGAAGCGAATTTAT+CGG - chr4_3:54980989-54981008 None:intergenic 30.0%
!! TTCAACTACCTTTGAAATGT+TGG + chr4_3:54981096-54981115 Msa0648510:CDS 30.0%
!! TCAACTACCTTTGAAATGTT+GGG + chr4_3:54981097-54981116 Msa0648510:CDS 30.0%
GTGAATCACATTAAGAAACA+TGG + chr4_3:54979841-54979860 Msa0648510:CDS 30.0%
TTAAGACCTGATATCAAAAG+AGG + chr4_3:54979946-54979965 Msa0648510:CDS 30.0%
! AATTGTCCTCTTTTGATATC+AGG - chr4_3:54979955-54979974 None:intergenic 30.0%
CGATGAGATTAACATAATCA+CGG - chr4_3:54980115-54980134 None:intergenic 30.0%
CAACTTCTAACATGTATCTT+TGG - chr4_3:54980143-54980162 None:intergenic 30.0%
CAATAAAGTATATCGAACTC+GGG - chr4_3:54980207-54980226 None:intergenic 30.0%
CCAATAAAGTATATCGAACT+CGG - chr4_3:54980208-54980227 None:intergenic 30.0%
AGATTGAGATGATCAATTCT+TGG - chr4_3:54980521-54980540 None:intergenic 30.0%
!!! GTTTTGAAGCAATTGGAATT+TGG - chr4_3:54980648-54980667 None:intergenic 30.0%
ATTCCAATTGCTTCAAAACA+TGG + chr4_3:54980649-54980668 Msa0648510:CDS 30.0%
AGCATGAATATTGGTACTAA+GGG - chr4_3:54980687-54980706 None:intergenic 30.0%
!! CTGATTTTGAGAAGCATAAT+TGG - chr4_3:54980807-54980826 None:intergenic 30.0%
AAGCAATGGATATCAGTTTA+TGG + chr4_3:54980871-54980890 Msa0648510:CDS 30.0%
GGATATCAGTTTATGGATAA+TGG + chr4_3:54980878-54980897 Msa0648510:CDS 30.0%
! TATCAGTTTATGGATAATGG+TGG + chr4_3:54980881-54980900 Msa0648510:CDS 30.0%
AAATTCGGAAGCGAATTTAT+CGG - chr4_3:54980989-54981008 None:intergenic 30.0%
!! TTCAACTACCTTTGAAATGT+TGG + chr4_3:54981096-54981115 Msa0648510:CDS 30.0%
!! TCAACTACCTTTGAAATGTT+GGG + chr4_3:54981097-54981116 Msa0648510:CDS 30.0%
TGATGAAAGTGGTTTGAAGA+AGG + chr4_3:54979786-54979805 Msa0648510:CDS 35.0%
GATGAAAGTGGTTTGAAGAA+GGG + chr4_3:54979787-54979806 Msa0648510:CDS 35.0%
! CTATTTAATCCTGCTAGCTT+TGG - chr4_3:54979889-54979908 None:intergenic 35.0%
CAAAGCTAGCAGGATTAAAT+AGG + chr4_3:54979887-54979906 Msa0648510:CDS 35.0%
TAGCAGGATTAAATAGGTGT+GGG + chr4_3:54979893-54979912 Msa0648510:CDS 35.0%
ATCAATTTGCATGCTGTTCT+TGG + chr4_3:54980000-54980019 Msa0648510:CDS 35.0%
TCAATTTGCATGCTGTTCTT+GGG + chr4_3:54980001-54980020 Msa0648510:CDS 35.0%
CCGAGTTCGATATACTTTAT+TGG + chr4_3:54980205-54980224 Msa0648510:intron 35.0%
TAGCTATAGTATCCAGAGTT+CGG - chr4_3:54980264-54980283 None:intergenic 35.0%
AACTCTGGATACTATAGCTA+GGG + chr4_3:54980264-54980283 Msa0648510:intron 35.0%
!! TCTCTTGTTTCTAGGGAAAA+AGG - chr4_3:54980291-54980310 None:intergenic 35.0%
! TTTTTCCCTAGAAACAAGAG+AGG + chr4_3:54980290-54980309 Msa0648510:intron 35.0%
! TTTTCCCTAGAAACAAGAGA+GGG + chr4_3:54980291-54980310 Msa0648510:intron 35.0%
!! TTAACCCTCTCTTGTTTCTA+GGG - chr4_3:54980298-54980317 None:intergenic 35.0%
ATTTCATTATCAGTCCTTCC+TGG - chr4_3:54980428-54980447 None:intergenic 35.0%
!!! GAACCATGTTTTGAAGCAAT+TGG - chr4_3:54980655-54980674 None:intergenic 35.0%
GAGCATGAATATTGGTACTA+AGG - chr4_3:54980688-54980707 None:intergenic 35.0%
ATTGAGTAACTGCAAGTTTG+AGG - chr4_3:54980714-54980733 None:intergenic 35.0%
TTGCAGTTACTCAATCCATT+TGG + chr4_3:54980719-54980738 Msa0648510:CDS 35.0%
GAAGATGAAGATTGTCCAAA+TGG - chr4_3:54980737-54980756 None:intergenic 35.0%
!!! ATGCAGCAAGTTTTAAGCAA+TGG + chr4_3:54980857-54980876 Msa0648510:CDS 35.0%
TTGCTTGAAGTCTGATCAAA+AGG + chr4_3:54980922-54980941 Msa0648510:CDS 35.0%
TGCTACAAATTCTTCTTCGA+CGG + chr4_3:54980961-54980980 Msa0648510:CDS 35.0%
GATAAATTCGCTTCCGAATT+TGG + chr4_3:54980988-54981007 Msa0648510:CDS 35.0%
!! AAAGAGATGATGGGAAACAA+GGG + chr4_3:54981040-54981059 Msa0648510:CDS 35.0%
! AAGGATTGGAACACTCATTT+TGG - chr4_3:54981069-54981088 None:intergenic 35.0%
AGTTGAAGTTGAAGAAGGAT+TGG - chr4_3:54981083-54981102 None:intergenic 35.0%
AAGGTAGTTGAAGTTGAAGA+AGG - chr4_3:54981088-54981107 None:intergenic 35.0%
GAAATCTCCCAACATTTCAA+AGG - chr4_3:54981107-54981126 None:intergenic 35.0%
TGATGAAAGTGGTTTGAAGA+AGG + chr4_3:54979786-54979805 Msa0648510:CDS 35.0%
GATGAAAGTGGTTTGAAGAA+GGG + chr4_3:54979787-54979806 Msa0648510:CDS 35.0%
! CTATTTAATCCTGCTAGCTT+TGG - chr4_3:54979889-54979908 None:intergenic 35.0%
CAAAGCTAGCAGGATTAAAT+AGG + chr4_3:54979887-54979906 Msa0648510:CDS 35.0%
TAGCAGGATTAAATAGGTGT+GGG + chr4_3:54979893-54979912 Msa0648510:CDS 35.0%
ATCAATTTGCATGCTGTTCT+TGG + chr4_3:54980000-54980019 Msa0648510:CDS 35.0%
TCAATTTGCATGCTGTTCTT+GGG + chr4_3:54980001-54980020 Msa0648510:CDS 35.0%
CCGAGTTCGATATACTTTAT+TGG + chr4_3:54980205-54980224 Msa0648510:intron 35.0%
TAGCTATAGTATCCAGAGTT+CGG - chr4_3:54980264-54980283 None:intergenic 35.0%
AACTCTGGATACTATAGCTA+GGG + chr4_3:54980264-54980283 Msa0648510:intron 35.0%
!! TCTCTTGTTTCTAGGGAAAA+AGG - chr4_3:54980291-54980310 None:intergenic 35.0%
! TTTTTCCCTAGAAACAAGAG+AGG + chr4_3:54980290-54980309 Msa0648510:intron 35.0%
! TTTTCCCTAGAAACAAGAGA+GGG + chr4_3:54980291-54980310 Msa0648510:intron 35.0%
!! TTAACCCTCTCTTGTTTCTA+GGG - chr4_3:54980298-54980317 None:intergenic 35.0%
ATTTCATTATCAGTCCTTCC+TGG - chr4_3:54980428-54980447 None:intergenic 35.0%
!!! GAACCATGTTTTGAAGCAAT+TGG - chr4_3:54980655-54980674 None:intergenic 35.0%
GAGCATGAATATTGGTACTA+AGG - chr4_3:54980688-54980707 None:intergenic 35.0%
ATTGAGTAACTGCAAGTTTG+AGG - chr4_3:54980714-54980733 None:intergenic 35.0%
TTGCAGTTACTCAATCCATT+TGG + chr4_3:54980719-54980738 Msa0648510:CDS 35.0%
GAAGATGAAGATTGTCCAAA+TGG - chr4_3:54980737-54980756 None:intergenic 35.0%
!!! ATGCAGCAAGTTTTAAGCAA+TGG + chr4_3:54980857-54980876 Msa0648510:CDS 35.0%
TTGCTTGAAGTCTGATCAAA+AGG + chr4_3:54980922-54980941 Msa0648510:CDS 35.0%
TGCTACAAATTCTTCTTCGA+CGG + chr4_3:54980961-54980980 Msa0648510:CDS 35.0%
GATAAATTCGCTTCCGAATT+TGG + chr4_3:54980988-54981007 Msa0648510:CDS 35.0%
!! AAAGAGATGATGGGAAACAA+GGG + chr4_3:54981040-54981059 Msa0648510:CDS 35.0%
! AAGGATTGGAACACTCATTT+TGG - chr4_3:54981069-54981088 None:intergenic 35.0%
AGTTGAAGTTGAAGAAGGAT+TGG - chr4_3:54981083-54981102 None:intergenic 35.0%
AAGGTAGTTGAAGTTGAAGA+AGG - chr4_3:54981088-54981107 None:intergenic 35.0%
GAAATCTCCCAACATTTCAA+AGG - chr4_3:54981107-54981126 None:intergenic 35.0%
AAACCACTTTCATCACAGCA+TGG - chr4_3:54979781-54979800 None:intergenic 40.0%
ACCAGAAGAGGACAGAATAT+TGG + chr4_3:54979819-54979838 Msa0648510:CDS 40.0%
ACCAATATTCTGTCCTCTTC+TGG - chr4_3:54979823-54979842 None:intergenic 40.0%
CACATTAAGAAACATGGCCA+TGG + chr4_3:54979847-54979866 Msa0648510:CDS 40.0%
CTAGCAGGATTAAATAGGTG+TGG + chr4_3:54979892-54979911 Msa0648510:CDS 40.0%
TAAAGTATATCGAACTCGGG+TGG - chr4_3:54980204-54980223 None:intergenic 40.0%
TTTATCTTCTAGCCGAACTC+TGG + chr4_3:54980249-54980268 Msa0648510:intron 40.0%
GAACTCTGGATACTATAGCT+AGG + chr4_3:54980263-54980282 Msa0648510:intron 40.0%
! CTTAACCCTCTCTTGTTTCT+AGG - chr4_3:54980299-54980318 None:intergenic 40.0%
!! AAGCCTAAGAGCATTAGTAG+TGG - chr4_3:54980612-54980631 None:intergenic 40.0%
! TGAGGTAGGAGCATGAATAT+TGG - chr4_3:54980696-54980715 None:intergenic 40.0%
! AGTAACTGCAAGTTTGAGGT+AGG - chr4_3:54980710-54980729 None:intergenic 40.0%
!! CTTAAAACTTGCTGCATCTG+AGG - chr4_3:54980854-54980873 None:intergenic 40.0%
! TTCGCTTCCGAATTTGGTTT+CGG + chr4_3:54980994-54981013 Msa0648510:CDS 40.0%
GGTGAAACCGAAACCAAATT+CGG - chr4_3:54981004-54981023 None:intergenic 40.0%
TCTTTCACACCAGAACATTC+TGG - chr4_3:54981025-54981044 None:intergenic 40.0%
TTCTGGTGTGAAAGAGATGA+TGG + chr4_3:54981030-54981049 Msa0648510:CDS 40.0%
TCTGGTGTGAAAGAGATGAT+GGG + chr4_3:54981031-54981050 Msa0648510:CDS 40.0%
!! GAAAGAGATGATGGGAAACA+AGG + chr4_3:54981039-54981058 Msa0648510:CDS 40.0%
!! AAGAGATGATGGGAAACAAG+GGG + chr4_3:54981041-54981060 Msa0648510:CDS 40.0%
GTTGGGAGATTTCATGTATG+AGG + chr4_3:54981114-54981133 Msa0648510:CDS 40.0%
AAACCACTTTCATCACAGCA+TGG - chr4_3:54979781-54979800 None:intergenic 40.0%
ACCAGAAGAGGACAGAATAT+TGG + chr4_3:54979819-54979838 Msa0648510:CDS 40.0%
ACCAATATTCTGTCCTCTTC+TGG - chr4_3:54979823-54979842 None:intergenic 40.0%
CACATTAAGAAACATGGCCA+TGG + chr4_3:54979847-54979866 Msa0648510:CDS 40.0%
CTAGCAGGATTAAATAGGTG+TGG + chr4_3:54979892-54979911 Msa0648510:CDS 40.0%
TAAAGTATATCGAACTCGGG+TGG - chr4_3:54980204-54980223 None:intergenic 40.0%
TTTATCTTCTAGCCGAACTC+TGG + chr4_3:54980249-54980268 Msa0648510:intron 40.0%
GAACTCTGGATACTATAGCT+AGG + chr4_3:54980263-54980282 Msa0648510:intron 40.0%
! CTTAACCCTCTCTTGTTTCT+AGG - chr4_3:54980299-54980318 None:intergenic 40.0%
!! AAGCCTAAGAGCATTAGTAG+TGG - chr4_3:54980612-54980631 None:intergenic 40.0%
! TGAGGTAGGAGCATGAATAT+TGG - chr4_3:54980696-54980715 None:intergenic 40.0%
! AGTAACTGCAAGTTTGAGGT+AGG - chr4_3:54980710-54980729 None:intergenic 40.0%
!! CTTAAAACTTGCTGCATCTG+AGG - chr4_3:54980854-54980873 None:intergenic 40.0%
! TTCGCTTCCGAATTTGGTTT+CGG + chr4_3:54980994-54981013 Msa0648510:CDS 40.0%
GGTGAAACCGAAACCAAATT+CGG - chr4_3:54981004-54981023 None:intergenic 40.0%
TCTTTCACACCAGAACATTC+TGG - chr4_3:54981025-54981044 None:intergenic 40.0%
TTCTGGTGTGAAAGAGATGA+TGG + chr4_3:54981030-54981049 Msa0648510:CDS 40.0%
TCTGGTGTGAAAGAGATGAT+GGG + chr4_3:54981031-54981050 Msa0648510:CDS 40.0%
!! GAAAGAGATGATGGGAAACA+AGG + chr4_3:54981039-54981058 Msa0648510:CDS 40.0%
!! AAGAGATGATGGGAAACAAG+GGG + chr4_3:54981041-54981060 Msa0648510:CDS 40.0%
GTTGGGAGATTTCATGTATG+AGG + chr4_3:54981114-54981133 Msa0648510:CDS 40.0%
AGAAACATGGCCATGGAAGT+TGG + chr4_3:54979854-54979873 Msa0648510:CDS 45.0%
ATTAGGTGGTCAGCTATAGC+AGG + chr4_3:54980395-54980414 Msa0648510:intron 45.0%
ATTCTTGGACGATGAGTCAC+TGG - chr4_3:54980506-54980525 None:intergenic 45.0%
CTGCCACTACTAATGCTCTT+AGG + chr4_3:54980606-54980625 Msa0648510:CDS 45.0%
TCGGTTTCACCAGAATGTTC+TGG + chr4_3:54981013-54981032 Msa0648510:CDS 45.0%
AGGATGTGAGCGATGCTTAT+TGG + chr4_3:54981134-54981153 Msa0648510:CDS 45.0%
AGAAACATGGCCATGGAAGT+TGG + chr4_3:54979854-54979873 Msa0648510:CDS 45.0%
ATTAGGTGGTCAGCTATAGC+AGG + chr4_3:54980395-54980414 Msa0648510:intron 45.0%
ATTCTTGGACGATGAGTCAC+TGG - chr4_3:54980506-54980525 None:intergenic 45.0%
CTGCCACTACTAATGCTCTT+AGG + chr4_3:54980606-54980625 Msa0648510:CDS 45.0%
TCGGTTTCACCAGAATGTTC+TGG + chr4_3:54981013-54981032 Msa0648510:CDS 45.0%
AGGATGTGAGCGATGCTTAT+TGG + chr4_3:54981134-54981153 Msa0648510:CDS 45.0%
!! AATAAAAATTAATCTATTAT+CGG - chr4_3:54980231-54980250 None:intergenic 5.0%
!! TTATTTGTATTATTATTATT+AGG + chr4_3:54980378-54980397 Msa0648510:intron 5.0%
!! AATAAAAATTAATCTATTAT+CGG - chr4_3:54980231-54980250 None:intergenic 5.0%
!! TTATTTGTATTATTATTATT+AGG + chr4_3:54980378-54980397 Msa0648510:intron 5.0%
GCACCATGCTGTGATGAAAG+TGG + chr4_3:54979775-54979794 Msa0648510:CDS 50.0%
GTGGTTTGAAGAAGGGACCT+TGG + chr4_3:54979794-54979813 Msa0648510:CDS 50.0%
! GAAGTGCTCTCCAACTTCCA+TGG - chr4_3:54979867-54979886 None:intergenic 50.0%
! AGAGCACTTCCAAAGCTAGC+AGG + chr4_3:54979877-54979896 Msa0648510:CDS 50.0%
GTGGGAAGAGTTGCAGACTA+AGG + chr4_3:54979911-54979930 Msa0648510:CDS 50.0%
GGAAGAGTTGCAGACTAAGG+TGG + chr4_3:54979914-54979933 Msa0648510:CDS 50.0%
GCTATAGCAGGTCATCTACC+AGG + chr4_3:54980407-54980426 Msa0648510:CDS 50.0%
TAGCAGGTCATCTACCAGGA+AGG + chr4_3:54980411-54980430 Msa0648510:CDS 50.0%
GCACCATGCTGTGATGAAAG+TGG + chr4_3:54979775-54979794 Msa0648510:CDS 50.0%
GTGGTTTGAAGAAGGGACCT+TGG + chr4_3:54979794-54979813 Msa0648510:CDS 50.0%
! GAAGTGCTCTCCAACTTCCA+TGG - chr4_3:54979867-54979886 None:intergenic 50.0%
! AGAGCACTTCCAAAGCTAGC+AGG + chr4_3:54979877-54979896 Msa0648510:CDS 50.0%
GTGGGAAGAGTTGCAGACTA+AGG + chr4_3:54979911-54979930 Msa0648510:CDS 50.0%
GGAAGAGTTGCAGACTAAGG+TGG + chr4_3:54979914-54979933 Msa0648510:CDS 50.0%
GCTATAGCAGGTCATCTACC+AGG + chr4_3:54980407-54980426 Msa0648510:CDS 50.0%
TAGCAGGTCATCTACCAGGA+AGG + chr4_3:54980411-54980430 Msa0648510:CDS 50.0%
CTGTCCTCTTCTGGTGTCCA+AGG - chr4_3:54979814-54979833 None:intergenic 55.0%
GTGGCAGTGTCCCAAGTGTT+TGG - chr4_3:54980593-54980612 None:intergenic 55.0%
CTGTCCTCTTCTGGTGTCCA+AGG - chr4_3:54979814-54979833 None:intergenic 55.0%
GTGGCAGTGTCCCAAGTGTT+TGG - chr4_3:54980593-54980612 None:intergenic 55.0%
GGGACCTTGGACACCAGAAG+AGG + chr4_3:54979807-54979826 Msa0648510:CDS 60.0%
GGGACCTTGGACACCAGAAG+AGG + chr4_3:54979807-54979826 Msa0648510:CDS 60.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 54979766 54981177 54979766 ID=Msa0648510;Name=Msa0648510
chr4_3 mRNA 54979766 54981177 54979766 ID=Msa0648510-mRNA-1;Parent=Msa0648510;Name=Msa0648510-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|2|0|346
chr4_3 exon 54979766 54980028 54979766 ID=Msa0648510-mRNA-1:exon:13939;Parent=Msa0648510-mRNA-1
chr4_3 exon 54980400 54981177 54980400 ID=Msa0648510-mRNA-1:exon:13940;Parent=Msa0648510-mRNA-1
chr4_3 CDS 54979766 54980028 54979766 ID=Msa0648510-mRNA-1:cds;Parent=Msa0648510-mRNA-1
chr4_3 CDS 54980400 54981177 54980400 ID=Msa0648510-mRNA-1:cds;Parent=Msa0648510-mRNA-1
Gene Sequence

>Msa0648510

ATGGGGAGAGCACCATGCTGTGATGAAAGTGGTTTGAAGAAGGGACCTTGGACACCAGAAGAGGACAGAATATTGGTGAATCACATTAAGAAACATGGCCATGGAAGTTGGAGAGCACTTCCAAAGCTAGCAGGATTAAATAGGTGTGGGAAGAGTTGCAGACTAAGGTGGACTAACTATTTAAGACCTGATATCAAAAGAGGACAATTCACAGATGAAGAAGAGAAAACAATCATCAATTTGCATGCTGTTCTTGGGAATAAGTGGTCAGCTATAGCAGGTCATCTACCAGGAAGGACTGATAATGAAATAAAGAATTTTTGGAACACACATTTAAAGAAAAAGCTTCTTCAAATGGGATTAGATCCAGTGACTCATCGTCCAAGAATTGATCATCTCAATCTTATGACAAATCTTCAACAGCTTCTTGCTGCAAACGTTCTCAATTATTTTCCAAACACTTGGGACACTGCCACTACTAATGCTCTTAGGCTTCAATCTGATGCAACCAAATTCCAATTGCTTCAAAACATGGTTCAAATTCAAGCCCTTAGTACCAATATTCATGCTCCTACCTCAAACTTGCAGTTACTCAATCCATTTGGACAATCTTCATCTTCATCACAGCAAGAAAATTTTCTAAATGAACTTTTAGGATTGAATCAATCCAATTATGCTTCTCAAAATCAGTGCAGCTTTCAAAGCTTTCAAGTACCTCAGATGCAGCAAGTTTTAAGCAATGGATATCAGTTTATGGATAATGGTGGCAGCAGCAACAGTAGTAGTTGCTTGAAGTCTGATCAAAAGGTTGATGAAGTATTTGATGCTACAAATTCTTCTTCGACGGTACCGATAAATTCGCTTCCGAATTTGGTTTCGGTTTCACCAGAATGTTCTGGTGTGAAAGAGATGATGGGAAACAAGGGGAACCAAAATGAGTGTTCCAATCCTTCTTCAACTTCAACTACCTTTGAAATGTTGGGAGATTTCATGTATGAGGATGTGAGCGATGCTTATTGGAAAGATCTCTTAGACTCTTAG
Protein sequence

>Msa0648510

MGRAPCCDESGLKKGPWTPEEDRILVNHIKKHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGQFTDEEEKTIINLHAVLGNKWSAIAGHLPGRTDNEIKNFWNTHLKKKLLQMGLDPVTHRPRIDHLNLMTNLQQLLAANVLNYFPNTWDTATTNALRLQSDATKFQLLQNMVQIQALSTNIHAPTSNLQLLNPFGQSSSSSQQENFLNELLGLNQSNYASQNQCSFQSFQVPQMQQVLSNGYQFMDNGGSSNSSSCLKSDQKVDEVFDATNSSSTVPINSLPNLVSVSPECSGVKEMMGNKGNQNECSNPSSTSTTFEMLGDFMYEDVSDAYWKDLLDS*