AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0748670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0748670 MtrunA17_Chr4g0065231 97.978 643 13 0 1 643 1 643 0.0 1285
Msa0748670 MtrunA17_Chr1g0202431 47.240 616 297 9 38 641 9 608 0.0 546
Msa0748670 MtrunA17_Chr8g0384391 43.239 599 298 10 74 642 55 641 4.56e-171 502
Msa0748670 MtrunA17_Chr2g0316301 43.548 620 306 14 42 641 39 634 4.86e-169 497
Msa0748670 MtrunA17_Chr3g0130331 43.167 600 295 10 74 642 57 641 1.82e-167 493
Msa0748670 MtrunA17_Chr3g0093331 93.004 243 17 0 95 337 18 260 2.15e-158 455
Msa0748670 MtrunA17_Chr7g0263351 34.633 667 362 13 37 634 80 741 9.73e-118 368
Msa0748670 MtrunA17_Chr1g0213091 34.513 678 353 13 42 634 74 745 6.71e-115 361
Msa0748670 MtrunA17_Chr4g0050291 28.014 589 386 11 74 634 49 627 5.40e-73 248
Msa0748670 MtrunA17_Chr5g0408061 30.793 643 396 19 23 636 14 636 2.31e-70 240
Msa0748670 MtrunA17_Chr4g0050251 27.428 587 390 13 74 634 72 648 2.82e-69 238
Msa0748670 MtrunA17_Chr8g0359931 30.586 631 406 17 20 636 14 626 2.35e-68 234
Msa0748670 MtrunA17_Chr1g0176451 32.210 534 322 14 74 578 22 544 4.47e-66 227
Msa0748670 MtrunA17_Chr4g0050261 26.282 624 391 13 74 634 72 689 8.85e-66 230
Msa0748670 MtrunA17_Chr1g0198931 29.738 649 383 21 34 636 56 677 1.38e-64 225
Msa0748670 MtrunA17_Chr1g0200651 30.405 592 367 13 75 636 90 666 2.86e-61 216
Msa0748670 MtrunA17_Chr6g0477811 25.839 596 383 10 74 629 65 641 5.80e-61 216
Msa0748670 MtrunA17_Chr4g0050221 27.491 582 381 12 75 629 31 598 5.84e-61 214
Msa0748670 MtrunA17_Chr5g0446901 30.357 560 353 14 22 548 46 601 3.98e-60 211
Msa0748670 MtrunA17_Chr1g0176441 29.851 536 339 14 74 578 170 699 1.44e-59 213
Msa0748670 MtrunA17_Chr5g0411621 41.197 284 159 4 35 318 16 291 2.85e-59 211
Msa0748670 MtrunA17_Chr5g0411621 35.294 323 183 8 320 640 425 723 1.08e-41 161
Msa0748670 MtrunA17_Chr3g0102731 30.375 507 328 10 62 548 85 586 4.85e-56 200
Msa0748670 MtrunA17_Chr8g0393191 40.816 245 141 4 75 318 69 310 1.15e-53 197
Msa0748670 MtrunA17_Chr8g0393191 27.119 295 186 7 364 634 519 808 1.20e-28 122
Msa0748670 MtrunA17_Chr7g0267971 29.121 546 336 13 74 581 159 691 3.68e-53 194
Msa0748670 MtrunA17_Chr4g0026731 25.347 576 367 13 105 629 9 572 1.41e-52 191
Msa0748670 MtrunA17_Chr4g0039261 25.415 602 402 14 71 637 47 636 2.88e-51 188
Msa0748670 MtrunA17_Chr4g0039251 27.203 522 342 8 75 570 93 602 2.21e-50 186
Msa0748670 MtrunA17_Chr1g0208391 25.283 530 354 8 75 578 93 606 2.36e-49 183
Msa0748670 MtrunA17_Chr1g0171351 27.663 629 386 22 20 610 839 1436 1.35e-48 184
Msa0748670 MtrunA17_Chr1g0171351 24.455 642 387 20 66 635 167 782 1.90e-43 168
Msa0748670 MtrunA17_Chr8g0340651 25.714 630 391 15 61 629 166 779 9.33e-48 181
Msa0748670 MtrunA17_Chr8g0340651 23.735 573 399 11 73 622 903 1460 7.34e-43 166
Msa0748670 MtrunA17_Chr3g0104621 26.557 610 390 18 6 581 700 1285 1.25e-47 181
Msa0748670 MtrunA17_Chr3g0104621 25.202 619 387 18 69 629 50 650 2.33e-40 159
Msa0748670 MtrunA17_Chr2g0318061 38.934 244 143 4 75 317 31 269 1.26e-47 172
Msa0748670 MtrunA17_Chr2g0331081 24.680 547 379 10 56 581 872 1406 2.14e-45 174
Msa0748670 MtrunA17_Chr2g0331081 25.120 625 399 16 67 635 171 782 1.01e-41 163
Msa0748670 MtrunA17_Chr5g0429871 26.307 612 397 16 12 589 599 1190 3.98e-45 173
Msa0748670 MtrunA17_Chr5g0429871 24.648 568 372 12 119 635 22 584 2.06e-44 171
Msa0748670 MtrunA17_Chr0c20g0493841 23.616 614 408 14 73 635 166 769 7.60e-45 172
Msa0748670 MtrunA17_Chr0c20g0493841 24.581 537 364 15 73 584 856 1376 7.56e-39 154
Msa0748670 MtrunA17_Chr3g0138261 24.724 635 394 19 62 632 153 767 1.57e-44 171
Msa0748670 MtrunA17_Chr3g0138261 24.862 543 368 13 73 591 868 1394 7.80e-37 148
Msa0748670 MtrunA17_Chr4g0050201 25.046 539 375 12 119 637 6 535 5.88e-44 165
Msa0748670 MtrunA17_Chr7g0261971 24.045 628 396 17 62 626 145 754 1.18e-43 169
Msa0748670 MtrunA17_Chr7g0261971 25.503 596 390 17 21 581 814 1390 4.35e-42 164
Msa0748670 MtrunA17_Chr7g0262251 24.795 609 391 16 66 629 166 752 1.94e-43 168
Msa0748670 MtrunA17_Chr7g0262251 24.818 548 353 13 75 581 827 1356 4.18e-41 161
Msa0748670 MtrunA17_Chr7g0265971 24.884 647 399 17 39 621 149 772 3.33e-43 167
Msa0748670 MtrunA17_Chr7g0265971 25.668 561 364 13 73 595 873 1418 6.11e-39 154
Msa0748670 MtrunA17_Chr7g0266001 24.279 659 414 19 39 635 34 669 9.38e-43 164
Msa0748670 MtrunA17_Chr7g0262231 26.157 562 378 15 38 578 850 1395 1.89e-42 165
Msa0748670 MtrunA17_Chr7g0262231 23.333 630 400 17 62 629 149 757 1.95e-41 162
Msa0748670 MtrunA17_Chr7g0262241 26.545 550 361 16 75 599 880 1411 1.91e-42 165
Msa0748670 MtrunA17_Chr7g0262241 23.016 630 402 17 62 629 149 757 1.57e-40 159
Msa0748670 MtrunA17_Chr7g0265981 24.623 597 397 14 31 595 837 1412 3.81e-42 164
Msa0748670 MtrunA17_Chr7g0265981 24.924 658 411 18 39 635 155 790 1.62e-41 162
Msa0748670 MtrunA17_Chr7g0261981 23.772 631 394 18 62 626 149 758 4.95e-42 164
Msa0748670 MtrunA17_Chr7g0261981 24.390 533 334 15 75 581 861 1350 2.94e-33 137
Msa0748670 MtrunA17_Chr1g0199471 36.559 279 172 5 48 324 490 765 1.15e-41 162
Msa0748670 MtrunA17_Chr1g0148841 25.512 537 375 9 59 578 861 1389 1.37e-41 162
Msa0748670 MtrunA17_Chr1g0148841 23.138 631 412 16 63 635 154 769 5.85e-35 142
Msa0748670 MtrunA17_Chr4g0003971 26.580 538 346 16 75 583 825 1342 2.02e-41 162
Msa0748670 MtrunA17_Chr4g0003971 23.349 621 393 15 66 622 152 753 2.59e-39 155
Msa0748670 MtrunA17_Chr7g0261951 23.473 622 396 18 67 626 155 758 4.50e-41 161
Msa0748670 MtrunA17_Chr7g0261951 24.712 607 403 17 21 592 818 1405 8.95e-38 150
Msa0748670 MtrunA17_Chr7g0265991 24.785 581 390 13 55 595 26 599 1.06e-40 157
Msa0748670 MtrunA17_Chr1g0148811 23.784 555 388 12 44 578 827 1366 3.88e-40 158
Msa0748670 MtrunA17_Chr1g0148811 23.824 638 410 17 59 635 135 757 3.38e-34 140
Msa0748670 MtrunA17_Chr2g0332221 23.370 629 395 19 64 628 156 761 6.23e-40 157
Msa0748670 MtrunA17_Chr2g0332221 22.743 576 410 12 38 593 822 1382 2.40e-39 155
Msa0748670 MtrunA17_Chr2g0332211 24.440 536 380 11 75 593 939 1466 6.60e-40 157
Msa0748670 MtrunA17_Chr2g0332211 24.525 632 386 23 61 625 233 840 3.64e-39 155
Msa0748670 MtrunA17_Chr7g0265961 23.692 650 404 19 49 635 156 776 6.71e-40 157
Msa0748670 MtrunA17_Chr7g0265961 22.684 529 353 15 73 577 829 1325 2.48e-30 127
Msa0748670 MtrunA17_Chr4g0003981 23.381 633 410 15 57 629 155 772 2.22e-39 155
Msa0748670 MtrunA17_Chr4g0003981 25.047 527 364 13 75 581 866 1381 6.39e-39 154
Msa0748670 MtrunA17_Chr1g0198291 26.040 553 356 15 56 577 875 1405 2.31e-39 155
Msa0748670 MtrunA17_Chr1g0198291 22.992 635 405 17 66 635 180 795 1.32e-36 147
Msa0748670 MtrunA17_Chr7g0262261 24.045 628 390 17 66 629 124 728 2.45e-39 155
Msa0748670 MtrunA17_Chr7g0262261 24.191 587 396 14 38 591 770 1340 9.04e-38 150
Msa0748670 MtrunA17_Chr7g0262221 26.384 542 349 16 75 581 854 1380 3.92e-39 155
Msa0748670 MtrunA17_Chr7g0262221 22.292 637 400 16 62 622 150 767 2.26e-38 152
Msa0748670 MtrunA17_Chr2g0332241 23.005 639 380 17 64 625 156 759 8.65e-39 154
Msa0748670 MtrunA17_Chr2g0332241 23.757 543 375 12 75 593 856 1383 1.56e-38 153
Msa0748670 MtrunA17_Chr4g0062871 24.735 566 369 17 44 578 817 1356 4.07e-38 152
Msa0748670 MtrunA17_Chr4g0062871 23.418 632 402 14 68 635 143 756 5.09e-34 139
Msa0748670 MtrunA17_Chr4g0004021 22.465 641 422 15 49 629 145 770 1.68e-37 150
Msa0748670 MtrunA17_Chr4g0004021 27.381 420 273 14 75 474 863 1270 6.04e-27 117
Msa0748670 MtrunA17_Chr4g0069211 22.313 614 405 14 73 635 165 757 7.18e-37 147
Msa0748670 MtrunA17_Chr4g0069211 31.122 196 131 4 73 267 844 1036 1.27e-20 97.1
Msa0748670 MtrunA17_Chr7g0264441 36.194 268 164 6 59 322 261 525 7.50e-37 147
Msa0748670 MtrunA17_Chr2g0327241 24.792 601 399 19 68 634 119 700 3.32e-36 145
Msa0748670 MtrunA17_Chr1g0180971 33.835 266 171 5 54 317 392 654 6.87e-36 144
Msa0748670 MtrunA17_Chr4g0028621 33.221 298 181 8 47 329 467 761 4.31e-35 142
Msa0748670 MtrunA17_Chr7g0262321 24.007 579 373 20 44 591 541 1083 4.10e-29 124
Msa0748670 MtrunA17_Chr7g0262321 22.892 498 313 16 176 629 17 487 1.15e-23 106
Msa0748670 MtrunA17_Chr4g0039231 35.979 189 119 2 138 325 20 207 7.77e-28 119
Msa0748670 MtrunA17_Chr6g0472481 32.474 194 127 4 75 267 13 203 1.83e-23 100
Msa0748670 MtrunA17_Chr7g0227391 26.639 244 145 10 59 289 428 650 9.73e-19 90.5
Msa0748670 MtrunA17_Chr8g0344651 26.645 304 176 12 75 351 615 898 6.03e-16 82.0
Msa0748670 MtrunA17_Chr8g0344651 27.660 235 156 9 56 289 1244 1465 6.77e-11 65.9
Msa0748670 MtrunA17_Chr3g0123411 31.878 229 120 10 75 289 922 1128 7.10e-16 82.0
Msa0748670 MtrunA17_Chr5g0433051 31.381 239 140 10 56 289 468 687 9.46e-16 81.3
Msa0748670 MtrunA17_Chr1g0180601 28.425 292 165 14 15 289 358 622 1.51e-15 80.9
Msa0748670 MtrunA17_Chr1g0180601 26.778 239 143 8 57 285 1058 1274 2.32e-11 67.4
Msa0748670 MtrunA17_Chr5g0412741 28.631 241 145 10 59 289 459 682 1.63e-15 80.5
Msa0748670 MtrunA17_Chr7g0257341 26.482 253 169 9 68 317 1470 1708 4.08e-15 79.7
Msa0748670 MtrunA17_Chr7g0257341 32.298 161 98 4 76 235 573 723 2.80e-14 77.0
Msa0748670 MtrunA17_Chr4g0047831 46.753 77 40 1 200 276 8 83 4.16e-15 71.2
Msa0748670 MtrunA17_Chr7g0264631 29.960 247 133 12 57 289 429 649 1.19e-14 78.2
Msa0748670 MtrunA17_Chr6g0451911 29.787 235 145 10 63 289 1017 1239 1.45e-14 77.8
Msa0748670 MtrunA17_Chr6g0451911 29.362 235 143 8 69 296 373 591 4.51e-12 69.7
Msa0748670 MtrunA17_Chr6g0452111 32.258 217 129 9 78 289 1040 1243 1.79e-14 77.4
Msa0748670 MtrunA17_Chr6g0452111 29.832 238 138 11 69 296 380 598 3.77e-12 69.7
Msa0748670 MtrunA17_Chr8g0353781 25.382 327 194 14 76 378 617 917 3.11e-14 76.6
Msa0748670 MtrunA17_Chr6g0452071 30.973 226 139 9 69 289 225 438 3.53e-14 75.5
Msa0748670 MtrunA17_Chr5g0433071 30.544 239 142 10 56 289 470 689 4.56e-14 75.9
Msa0748670 MtrunA17_Chr3g0093091 28.191 188 118 6 76 259 638 812 5.38e-14 75.9
Msa0748670 MtrunA17_Chr6g0452061 31.707 205 124 8 90 289 561 754 6.21e-14 75.5
Msa0748670 MtrunA17_Chr4g0061601 27.803 223 144 9 75 292 404 614 9.58e-14 74.7
Msa0748670 MtrunA17_Chr4g0041871 28.821 229 127 10 75 289 1023 1229 1.59e-13 74.3
Msa0748670 MtrunA17_Chr4g0041871 26.800 250 143 11 56 291 345 568 6.96e-11 65.9
Msa0748670 MtrunA17_Chr6g0452171 31.278 227 130 8 73 289 1035 1245 2.43e-13 73.6
Msa0748670 MtrunA17_Chr6g0452171 28.992 238 140 11 69 296 373 591 3.50e-11 66.6
Msa0748670 MtrunA17_Chr6g0451881 31.220 205 125 8 90 289 1039 1232 2.85e-13 73.6
Msa0748670 MtrunA17_Chr6g0451881 29.412 238 139 11 69 296 373 591 1.79e-12 70.9
Msa0748670 MtrunA17_Chr7g0215001 24.156 385 222 13 224 557 1 366 3.08e-13 72.0
Msa0748670 MtrunA17_Chr6g0452141 30.531 226 140 9 69 289 1029 1242 3.70e-13 73.2
Msa0748670 MtrunA17_Chr6g0452141 28.085 235 146 8 69 296 374 592 8.96e-12 68.6
Msa0748670 MtrunA17_Chr4g0069351 28.571 224 139 7 73 289 1051 1260 4.14e-13 73.2
Msa0748670 MtrunA17_Chr4g0069351 28.125 256 150 10 89 332 409 642 5.51e-11 66.2
Msa0748670 MtrunA17_Chr7g0249091 32.083 240 113 11 75 284 100 319 4.53e-13 70.9
Msa0748670 MtrunA17_Chr1g0178481 29.918 244 121 10 70 289 394 611 5.78e-13 72.0
Msa0748670 MtrunA17_Chr3g0093041 26.943 193 130 4 68 259 188 370 5.91e-13 72.0
Msa0748670 MtrunA17_Chr6g0463121 26.496 234 145 8 57 289 623 830 6.71e-13 72.4
Msa0748670 MtrunA17_Chr3g0132711 24.771 218 148 6 48 259 177 384 7.00e-13 71.6
Msa0748670 MtrunA17_Chr5g0410921 29.388 245 141 10 57 291 992 1214 7.85e-13 72.0
Msa0748670 MtrunA17_Chr5g0410921 29.386 228 131 9 73 289 371 579 1.35e-12 71.2
Msa0748670 MtrunA17_Chr4g0060401 28.249 177 112 5 86 259 641 805 8.27e-13 72.0
Msa0748670 MtrunA17_Chr4g0060431 27.684 177 113 5 86 259 628 792 1.47e-12 71.2
Msa0748670 MtrunA17_Chr2g0318071 28.079 203 137 4 436 636 37 232 1.48e-12 67.8
Msa0748670 MtrunA17_Chr6g0453051 29.482 251 131 11 56 289 365 586 1.58e-12 71.2
Msa0748670 MtrunA17_Chr8g0363771 25.952 289 181 8 74 358 652 911 1.59e-12 71.2
Msa0748670 MtrunA17_Chr4g0069361 28.906 256 148 10 89 332 409 642 1.90e-12 70.9
Msa0748670 MtrunA17_Chr4g0069361 28.774 212 130 7 85 289 1063 1260 4.80e-12 69.7
Msa0748670 MtrunA17_Chr1g0156821 26.957 230 156 6 73 300 1009 1228 2.28e-12 70.5
Msa0748670 MtrunA17_Chr8g0341761 26.728 217 132 8 76 289 614 806 2.35e-12 70.5
Msa0748670 MtrunA17_Chr6g0452041 29.730 222 140 8 73 289 1034 1244 3.04e-12 70.1
Msa0748670 MtrunA17_Chr6g0452041 29.832 238 138 11 69 296 373 591 2.97e-11 67.0
Msa0748670 MtrunA17_Chr8g0341811 24.911 281 176 10 76 355 455 701 5.46e-12 69.3
Msa0748670 MtrunA17_Chr2g0295911 24.590 366 203 15 76 406 659 986 5.49e-12 69.3
Msa0748670 MtrunA17_Chr4g0060501 25.234 214 144 6 86 296 643 843 6.03e-12 68.9
Msa0748670 MtrunA17_Chr6g0486841 25.969 258 135 10 57 292 1005 1228 6.53e-12 68.9
Msa0748670 MtrunA17_Chr6g0486841 27.602 221 132 9 75 285 376 578 8.03e-11 65.5
Msa0748670 MtrunA17_Chr4g0039821 27.232 224 142 7 73 289 1049 1258 6.93e-12 68.9
Msa0748670 MtrunA17_Chr8g0341751 26.728 217 132 9 76 289 442 634 7.91e-12 68.9
Msa0748670 MtrunA17_Chr3g0128381 27.074 229 147 8 73 291 405 623 1.19e-11 67.8
Msa0748670 MtrunA17_Chr6g0472531 24.845 322 206 12 57 372 574 865 1.22e-11 68.2
Msa0748670 MtrunA17_Chr6g0474071 25.556 270 179 11 5 265 165 421 1.25e-11 67.4
Msa0748670 MtrunA17_Chr2g0295921 25.532 282 165 9 81 358 676 916 1.35e-11 68.2
Msa0748670 MtrunA17_Chr6g0463151 23.529 340 220 13 57 388 441 748 1.39e-11 68.2
Msa0748670 MtrunA17_Chr4g0069221 23.188 207 155 2 382 584 115 321 1.50e-11 66.6
Msa0748670 MtrunA17_Chr1g0195691 22.832 346 201 13 76 390 668 978 1.70e-11 67.8
Msa0748670 MtrunA17_Chr3g0119381 26.496 234 154 8 63 289 1059 1281 1.72e-11 67.8
Msa0748670 MtrunA17_Chr4g0060421 27.119 177 114 5 86 259 163 327 2.02e-11 66.6
Msa0748670 MtrunA17_Chr3g0138211 28.125 224 135 9 75 289 413 619 2.62e-11 67.0
Msa0748670 MtrunA17_Chr2g0295901 24.390 246 155 7 81 323 664 881 3.54e-11 66.6
Msa0748670 MtrunA17_Chr7g0233901 26.991 226 148 8 73 292 1010 1224 5.23e-11 66.2
Msa0748670 MtrunA17_Chr4g0069401 26.809 235 158 7 59 289 1034 1258 5.36e-11 66.2
Msa0748670 MtrunA17_Chr2g0285311 26.531 245 132 10 65 289 1033 1249 7.29e-11 65.9
Msa0748670 MtrunA17_Chr2g0285191 27.273 264 153 11 73 322 413 651 8.12e-11 65.5
Msa0748670 MtrunA17_Chr6g0481921 25.338 296 173 10 15 289 883 1151 8.76e-11 65.5
Msa0748670 MtrunA17_Chr7g0238421 30.128 156 97 4 88 242 17 161 8.80e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0748670 AT5G19410.2 63.456 654 196 11 1 642 10 632 0.0 794
Msa0748670 AT5G19410.1 63.456 654 196 11 1 642 1 623 0.0 794
Msa0748670 AT5G52860.1 46.405 612 288 10 36 639 6 585 0.0 535
Msa0748670 AT4G25750.1 45.937 603 290 10 41 639 3 573 2.37e-179 521
Msa0748670 AT1G53270.1 44.040 604 304 10 41 641 16 588 2.67e-167 491
Msa0748670 AT2G13610.1 44.088 592 299 9 74 642 61 643 2.20e-165 488
Msa0748670 AT3G55090.1 34.925 670 360 12 35 634 64 727 1.41e-123 383
Msa0748670 AT3G55110.1 35.093 644 358 11 44 634 63 699 4.87e-119 370
Msa0748670 AT3G55100.1 34.006 644 372 11 38 634 16 653 1.90e-118 368
Msa0748670 AT3G55100.2 34.006 644 372 11 38 634 16 653 1.90e-118 368
Msa0748670 AT2G39350.1 34.125 674 356 14 42 634 65 731 4.61e-117 366
Msa0748670 AT2G37360.1 34.691 663 351 13 42 634 96 746 1.65e-115 363
Msa0748670 AT3G55130.1 33.839 659 363 10 39 634 68 716 3.64e-114 358
Msa0748670 AT5G13580.1 35.437 618 336 11 74 634 107 718 2.97e-113 356
Msa0748670 AT3G53510.1 35.484 651 356 11 42 634 86 730 3.14e-108 343
Msa0748670 AT3G25620.2 31.782 623 372 19 44 634 68 669 5.92e-72 245
Msa0748670 AT1G31770.1 29.224 657 415 15 1 636 17 644 7.49e-70 239
Msa0748670 AT1G71960.1 30.318 597 377 13 67 636 75 659 9.48e-66 228
Msa0748670 AT3G13220.1 29.900 602 361 18 74 639 105 681 2.35e-62 219
Msa0748670 AT2G01320.8 27.000 600 374 14 4 578 43 603 1.16e-61 217
Msa0748670 AT2G01320.5 27.000 600 374 14 4 578 43 603 1.16e-61 217
Msa0748670 AT2G01320.1 27.000 600 374 14 4 578 43 603 4.79e-61 217
Msa0748670 AT2G01320.4 27.000 600 374 14 4 578 43 603 4.79e-61 217
Msa0748670 AT2G01320.2 27.000 600 374 14 4 578 43 603 6.52e-61 216
Msa0748670 AT2G01320.3 27.000 600 374 14 4 578 43 603 7.84e-61 216
Msa0748670 AT5G06530.2 29.272 632 359 17 41 634 163 744 1.54e-60 216
Msa0748670 AT5G06530.1 29.272 632 359 17 41 634 163 744 1.54e-60 216
Msa0748670 AT1G17840.1 27.890 545 359 9 74 591 68 605 2.37e-60 214
Msa0748670 AT3G21090.1 28.476 597 378 13 74 634 44 627 6.31e-60 213
Msa0748670 AT4G27420.1 29.375 640 406 17 20 636 15 631 6.48e-60 212
Msa0748670 AT5G06530.3 30.939 543 314 14 41 548 163 679 1.16e-58 209
Msa0748670 AT5G06530.4 31.919 495 288 14 92 548 1 484 8.17e-58 203
Msa0748670 AT1G51500.1 27.752 645 412 17 29 637 5 631 8.25e-56 201
Msa0748670 AT2G01320.7 27.553 519 310 14 4 496 43 521 8.26e-52 187
Msa0748670 AT2G01320.6 27.553 519 310 14 4 496 43 521 8.26e-52 187
Msa0748670 AT3G25620.1 42.248 258 141 6 44 299 68 319 4.31e-51 184
Msa0748670 AT2G29940.1 25.080 626 411 13 62 635 162 781 8.78e-49 184
Msa0748670 AT2G29940.1 27.273 572 360 18 44 581 819 1368 8.81e-48 181
Msa0748670 AT1G15210.1 23.913 644 446 16 2 621 798 1421 2.59e-48 183
Msa0748670 AT1G15210.1 23.387 620 397 16 69 626 178 781 8.57e-40 157
Msa0748670 AT1G59870.1 23.597 606 422 12 1 581 820 1409 3.55e-47 180
Msa0748670 AT1G59870.1 23.360 625 408 14 69 635 180 791 1.56e-36 147
Msa0748670 AT3G16340.1 25.308 569 384 12 38 583 808 1358 3.11e-46 177
Msa0748670 AT3G16340.1 23.840 625 394 15 69 629 156 762 1.46e-40 160
Msa0748670 AT3G16340.2 25.308 569 384 12 38 583 803 1353 3.49e-46 177
Msa0748670 AT3G16340.2 23.840 625 389 16 69 629 156 757 5.76e-39 155
Msa0748670 AT2G37280.3 24.507 608 420 15 11 591 799 1394 4.88e-46 176
Msa0748670 AT2G37280.3 21.865 654 399 19 73 635 152 784 3.90e-33 137
Msa0748670 AT3G53480.1 24.181 641 434 17 20 624 818 1442 5.51e-46 176
Msa0748670 AT3G53480.1 23.274 623 399 19 73 635 187 790 3.58e-35 143
Msa0748670 AT2G37280.4 24.507 608 420 15 11 591 612 1207 6.31e-46 176
Msa0748670 AT2G37280.4 22.549 612 391 17 86 635 7 597 1.35e-35 144
Msa0748670 AT2G37280.1 23.895 611 420 15 11 591 770 1365 8.50e-46 176
Msa0748670 AT2G37280.1 22.720 625 400 17 73 635 152 755 5.63e-37 149
Msa0748670 AT2G36380.1 24.653 649 402 17 52 633 165 793 3.14e-44 171
Msa0748670 AT2G36380.1 25.121 621 402 20 20 600 822 1419 1.96e-40 159
Msa0748670 AT1G51460.1 24.547 607 397 15 75 634 30 622 6.70e-44 167
Msa0748670 AT1G15520.1 25.618 566 382 18 38 581 819 1367 1.03e-41 163
Msa0748670 AT1G15520.1 22.524 626 408 17 62 626 156 765 5.94e-38 152
Msa0748670 AT2G37010.2 35.294 272 159 5 54 317 479 741 3.66e-41 161
Msa0748670 AT2G37010.1 35.294 272 159 5 54 317 479 741 3.66e-41 161
Msa0748670 AT4G15233.7 23.481 609 423 14 67 642 147 745 7.28e-41 160
Msa0748670 AT4G15233.7 23.643 571 378 13 55 589 776 1324 1.54e-37 150
Msa0748670 AT4G15233.5 23.272 593 414 13 67 626 85 669 8.35e-41 160
Msa0748670 AT4G15233.5 24.203 533 351 12 88 589 689 1199 1.66e-35 144
Msa0748670 AT4G15233.4 23.272 593 414 13 67 626 85 669 8.35e-41 160
Msa0748670 AT4G15233.4 24.203 533 351 12 88 589 689 1199 1.66e-35 144
Msa0748670 AT1G66950.1 26.212 557 370 17 44 577 853 1391 1.36e-40 160
Msa0748670 AT1G66950.1 23.538 650 411 16 52 635 167 796 1.13e-37 151
Msa0748670 AT1G53390.1 36.398 261 161 5 59 317 507 764 4.34e-40 158
Msa0748670 AT4G15236.1 23.979 563 386 15 55 589 792 1340 5.24e-40 158
Msa0748670 AT4G15236.1 22.356 662 437 16 34 642 124 761 9.63e-38 151
Msa0748670 AT4G15233.2 22.807 627 423 14 67 642 147 763 6.94e-39 154
Msa0748670 AT4G15233.2 22.689 595 378 14 55 589 794 1366 2.02e-33 137
Msa0748670 AT4G15233.3 22.807 627 423 14 67 642 85 701 7.84e-39 154
Msa0748670 AT4G15233.3 23.643 571 378 13 55 589 732 1280 1.72e-37 150
Msa0748670 AT4G15233.6 22.807 627 423 14 67 642 85 701 7.84e-39 154
Msa0748670 AT4G15233.6 23.643 571 378 13 55 589 732 1280 1.72e-37 150
Msa0748670 AT4G15233.1 22.807 627 423 14 67 642 147 763 8.98e-39 154
Msa0748670 AT4G15233.1 23.643 571 378 13 55 589 794 1342 2.17e-37 150
Msa0748670 AT2G28070.2 24.374 599 404 15 68 634 126 707 1.33e-38 152
Msa0748670 AT2G28070.1 24.374 599 404 15 68 634 126 707 1.33e-38 152
Msa0748670 AT2G37280.2 24.035 570 388 15 11 550 770 1324 3.17e-38 152
Msa0748670 AT2G37280.2 22.720 625 400 17 73 635 152 755 6.78e-37 148
Msa0748670 AT4G15215.8 24.237 590 389 17 29 584 767 1332 4.43e-38 152
Msa0748670 AT4G15215.8 22.347 622 401 18 67 629 142 740 3.89e-35 143
Msa0748670 AT4G15215.10 24.237 590 389 17 29 584 767 1332 4.43e-38 152
Msa0748670 AT4G15215.10 22.347 622 401 18 67 629 142 740 3.89e-35 143
Msa0748670 AT4G15215.6 24.237 590 389 17 29 584 767 1332 4.43e-38 152
Msa0748670 AT4G15215.6 22.347 622 401 18 67 629 142 740 3.89e-35 143
Msa0748670 AT4G15215.7 24.237 590 389 17 29 584 767 1332 4.43e-38 152
Msa0748670 AT4G15215.7 22.347 622 401 18 67 629 142 740 3.89e-35 143
Msa0748670 AT4G15215.11 24.237 590 389 17 29 584 777 1342 5.00e-38 152
Msa0748670 AT4G15215.11 22.508 622 407 17 67 629 145 750 3.06e-37 149
Msa0748670 AT4G15215.1 24.237 590 389 17 29 584 770 1335 5.76e-38 152
Msa0748670 AT4G15215.1 22.347 622 401 18 67 629 145 743 4.92e-35 142
Msa0748670 AT4G15215.9 24.237 590 389 17 29 584 774 1339 5.82e-38 152
Msa0748670 AT4G15215.9 22.508 622 407 17 67 629 142 747 3.86e-37 149
Msa0748670 AT4G15215.4 24.237 590 389 17 29 584 774 1339 5.82e-38 152
Msa0748670 AT4G15215.4 22.508 622 407 17 67 629 142 747 3.86e-37 149
Msa0748670 AT4G15215.5 24.237 590 389 17 29 584 774 1339 5.82e-38 152
Msa0748670 AT4G15215.5 22.508 622 407 17 67 629 142 747 3.86e-37 149
Msa0748670 AT4G15215.3 24.237 590 389 17 29 584 774 1339 5.82e-38 152
Msa0748670 AT4G15215.3 22.508 622 407 17 67 629 142 747 3.86e-37 149
Msa0748670 AT4G15215.2 24.237 590 389 17 29 584 774 1339 5.82e-38 152
Msa0748670 AT4G15215.2 22.508 622 407 17 67 629 142 747 3.86e-37 149
Msa0748670 AT1G15520.2 22.524 626 408 17 62 626 156 765 8.04e-38 151
Msa0748670 AT1G15520.2 27.051 451 290 18 38 466 819 1252 1.39e-27 119
Msa0748670 AT4G15233.8 23.643 571 378 13 55 589 785 1333 2.01e-37 150
Msa0748670 AT4G15233.8 22.648 627 415 15 67 642 147 754 9.17e-36 145
Msa0748670 AT3G30842.1 21.406 626 402 13 57 619 143 741 2.67e-37 150
Msa0748670 AT3G30842.1 25.352 568 364 18 55 581 815 1363 1.13e-36 148
Msa0748670 AT2G26910.1 24.824 568 366 17 44 578 818 1357 6.22e-36 145
Msa0748670 AT2G26910.1 21.725 626 432 11 62 635 137 756 7.49e-34 139
Msa0748670 AT4G15230.4 22.222 666 443 17 22 635 36 678 1.22e-35 144
Msa0748670 AT4G15230.4 22.318 578 417 13 28 584 700 1266 1.52e-35 144
Msa0748670 AT4G15230.3 22.318 578 417 13 28 584 779 1345 2.35e-35 144
Msa0748670 AT4G15230.3 22.222 666 443 17 22 635 115 757 2.41e-35 144
Msa0748670 AT4G15230.1 22.318 578 417 13 28 584 779 1345 2.35e-35 144
Msa0748670 AT4G15230.1 22.222 666 443 17 22 635 115 757 2.41e-35 144
Msa0748670 AT4G15230.2 22.222 666 443 17 22 635 115 757 2.49e-35 144
Msa0748670 AT4G15230.2 21.101 545 398 13 28 551 779 1312 5.35e-25 111
Msa0748670 AT5G60740.1 35.636 275 172 5 54 326 494 765 4.67e-35 142
Msa0748670 AT1G28010.1 28.319 226 146 6 71 292 385 598 6.03e-16 82.4
Msa0748670 AT1G28010.1 27.615 239 151 11 56 289 1008 1229 1.59e-13 74.7
Msa0748670 AT2G41700.1 22.727 330 216 6 44 348 1447 1762 1.43e-15 81.6
Msa0748670 AT2G41700.1 28.750 160 105 3 76 235 568 718 3.04e-12 70.9
Msa0748670 AT2G41700.2 24.390 287 191 7 44 329 1405 1666 2.61e-15 80.9
Msa0748670 AT2G41700.2 28.750 160 105 3 76 235 498 648 2.25e-12 71.2
Msa0748670 AT1G27940.1 27.442 215 148 5 71 285 384 590 4.95e-15 79.7
Msa0748670 AT1G27940.1 29.956 227 131 7 73 289 1019 1227 6.03e-14 76.3
Msa0748670 AT1G27940.2 27.442 215 148 5 71 285 170 376 6.90e-15 79.0
Msa0748670 AT1G27940.2 29.956 227 131 7 73 289 805 1013 6.30e-14 75.9
Msa0748670 AT5G58270.1 28.959 221 137 6 75 289 494 700 1.47e-14 77.8
Msa0748670 AT3G47740.1 27.461 193 121 6 72 259 627 805 1.50e-14 77.8
Msa0748670 AT3G28415.2 29.258 229 132 11 73 289 999 1209 3.18e-14 77.0
Msa0748670 AT3G28415.2 26.786 280 165 12 56 325 348 597 1.25e-12 72.0
Msa0748670 AT3G28415.1 29.258 229 132 11 73 289 991 1201 3.32e-14 77.0
Msa0748670 AT3G28415.1 26.786 280 165 12 56 325 340 589 1.47e-12 71.6
Msa0748670 AT1G65410.1 32.627 236 119 9 74 284 98 318 3.69e-14 74.7
Msa0748670 AT3G28390.1 27.526 287 177 11 8 289 945 1205 5.01e-14 76.3
Msa0748670 AT3G28390.1 29.455 275 144 12 85 342 374 615 1.21e-12 72.0
Msa0748670 AT3G47770.2 28.108 185 118 5 78 259 633 805 6.43e-14 75.9
Msa0748670 AT3G47770.1 28.108 185 118 5 78 259 607 779 7.79e-14 75.5
Msa0748670 AT5G61700.2 26.702 191 126 5 72 259 612 791 9.88e-14 75.1
Msa0748670 AT5G61700.4 26.702 191 126 5 72 259 612 791 9.88e-14 75.1
Msa0748670 AT3G47780.1 27.083 192 123 6 72 259 630 808 1.09e-13 75.1
Msa0748670 AT4G25450.1 28.333 240 158 7 73 308 485 714 1.17e-13 74.7
Msa0748670 AT2G36910.1 29.218 243 140 9 57 289 371 591 1.55e-13 74.7
Msa0748670 AT3G28360.1 31.455 213 126 9 85 291 373 571 1.56e-13 74.7
Msa0748670 AT3G28360.1 27.645 293 171 15 7 289 945 1206 1.58e-12 71.6
Msa0748670 AT3G28380.1 28.372 215 124 10 90 292 1027 1223 1.72e-13 74.7
Msa0748670 AT3G28380.1 31.336 217 121 9 87 293 388 586 1.50e-12 71.6
Msa0748670 AT1G10680.2 27.426 237 154 9 56 289 363 584 1.79e-13 74.7
Msa0748670 AT4G25450.3 28.512 242 155 8 73 308 316 545 2.17e-13 73.6
Msa0748670 AT1G10680.1 27.426 237 154 9 56 289 363 584 3.43e-13 73.6
Msa0748670 AT1G10680.1 27.074 229 139 6 73 291 997 1207 1.68e-11 68.2
Msa0748670 AT4G25960.1 27.984 243 143 8 57 289 1033 1253 3.59e-13 73.6
Msa0748670 AT4G25960.1 27.386 241 149 10 56 289 403 624 2.15e-12 71.2
Msa0748670 AT3G47790.1 23.571 280 195 7 76 352 607 870 5.90e-13 72.8
Msa0748670 AT4G28620.1 29.680 219 138 6 75 289 454 660 6.53e-13 72.4
Msa0748670 AT5G61700.1 26.562 192 124 6 72 259 612 790 6.94e-13 72.4
Msa0748670 AT1G02530.1 26.786 224 145 7 73 289 1042 1253 9.54e-13 72.4
Msa0748670 AT3G28860.1 29.032 248 136 12 56 289 367 588 1.13e-12 72.0
Msa0748670 AT3G47790.2 25.946 185 123 5 76 257 488 661 1.20e-12 71.6
Msa0748670 AT3G47790.3 25.946 185 123 5 76 257 607 780 1.28e-12 71.6
Msa0748670 AT4G28630.1 28.378 222 143 6 75 292 452 661 1.30e-12 71.2
Msa0748670 AT5G46540.1 26.816 358 206 17 73 394 372 709 1.34e-12 71.6
Msa0748670 AT3G28345.1 31.797 217 124 9 85 293 386 586 1.37e-12 71.6
Msa0748670 AT3G28345.1 28.761 226 137 10 73 289 1010 1220 1.64e-12 71.6
Msa0748670 AT3G47760.1 26.064 188 122 6 76 259 595 769 2.29e-12 70.9
Msa0748670 AT3G47760.3 26.064 188 122 6 76 259 635 809 2.68e-12 70.9
Msa0748670 AT3G47760.2 26.064 188 122 6 76 259 605 779 3.76e-12 70.1
Msa0748670 AT3G47730.1 26.943 193 130 4 68 259 539 721 6.13e-12 69.7
Msa0748670 AT5G61690.2 27.778 198 120 7 69 259 541 722 6.65e-12 69.3
Msa0748670 AT4G01820.1 25.778 225 155 5 68 289 994 1209 8.18e-12 69.3
Msa0748670 AT5G61730.2 26.562 192 130 4 69 259 542 723 1.39e-11 68.6
Msa0748670 AT5G61730.1 26.562 192 130 4 69 259 532 713 1.43e-11 68.2
Msa0748670 AT1G70610.1 26.407 231 137 9 73 289 470 681 1.66e-11 67.8
Msa0748670 AT1G02520.1 26.339 224 146 7 73 289 1047 1258 1.92e-11 68.2
Msa0748670 AT1G02520.2 26.339 224 146 7 73 289 1047 1258 1.92e-11 68.2
Msa0748670 AT1G02520.3 26.339 224 146 7 73 289 1047 1258 1.92e-11 68.2
Msa0748670 AT1G70610.2 26.407 231 137 9 73 289 289 500 1.94e-11 67.4
Msa0748670 AT5G39040.1 28.378 222 138 8 75 289 413 620 2.25e-11 67.4
Msa0748670 AT3G62150.3 27.753 227 137 9 73 289 1067 1276 2.73e-11 67.4
Msa0748670 AT3G62150.3 27.753 227 126 9 74 285 419 622 4.08e-11 67.0
Msa0748670 AT3G62150.2 27.753 227 137 9 73 289 1067 1276 2.73e-11 67.4
Msa0748670 AT3G62150.2 27.753 227 126 9 74 285 419 622 4.08e-11 67.0
Msa0748670 AT3G62150.1 27.753 227 137 9 73 289 1067 1276 2.73e-11 67.4
Msa0748670 AT3G62150.1 27.753 227 126 9 74 285 419 622 4.08e-11 67.0
Msa0748670 AT2G47000.6 27.753 227 137 9 73 289 1057 1266 2.87e-11 67.4
Msa0748670 AT2G47000.5 27.753 227 137 9 73 289 1057 1266 2.87e-11 67.4
Msa0748670 AT2G47000.1 27.753 227 137 9 73 289 1057 1266 2.87e-11 67.4
Msa0748670 AT4G18050.1 28.378 222 141 7 73 289 370 578 3.96e-11 67.0
Msa0748670 AT4G18050.2 28.378 222 141 7 73 289 380 588 4.11e-11 67.0
Msa0748670 AT4G01830.1 26.432 227 151 7 68 289 995 1210 6.50e-11 66.2
Msa0748670 AT4G01830.2 26.432 227 151 7 68 289 761 976 7.81e-11 65.9
Msa0748670 AT2G47000.3 27.679 224 130 8 74 285 400 603 9.37e-11 65.9
Msa0748670 AT2G47000.7 27.679 224 130 8 74 285 400 603 9.37e-11 65.9
Msa0748670 AT2G47000.4 27.679 224 130 8 74 285 400 603 9.45e-11 65.9

Find 100 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGTCTCCTGATTTCATTTC+AGG 0.124642 5_2:+1920845 Msa0748670:CDS
TCTTCAATGTGTTTGGTTAC+TGG 0.144613 5_2:+1921052 Msa0748670:CDS
TATTTCTGTGTTCAAGATTT+TGG 0.145932 5_2:+1920393 Msa0748670:CDS
GTGAAAGAAACTTTGCTATT+TGG 0.164726 5_2:+1919735 Msa0748670:CDS
TGTATTATGTGTCACTTTAT+AGG 0.198545 5_2:+1920960 Msa0748670:CDS
ACTCTTAATTCTCTTTCTTT+TGG 0.229332 5_2:-1919786 None:intergenic
GGTTCATCCAAGACTAAAAT+TGG 0.233960 5_2:-1919939 None:intergenic
ATCATTGATTGAGATAGTTT+TGG 0.257404 5_2:-1919631 None:intergenic
TCACTCATATGCACAGTTCT+TGG 0.258219 5_2:+1920872 Msa0748670:CDS
CAAGCATTAGTTGGTGGATT+TGG 0.270034 5_2:+1920461 Msa0748670:CDS
GTTCTCTCTTGAAGATATAT+TGG 0.277142 5_2:-1920596 None:intergenic
TCTCTGGTGGTGAAAGAAAA+AGG 0.281035 5_2:+1919883 Msa0748670:CDS
TGTTCTATCGTTTGCTTTGT+TGG 0.295732 5_2:+1921152 Msa0748670:CDS
AAGAGAGTATTCCAAAATAT+TGG 0.300349 5_2:+1920930 Msa0748670:CDS
AGAGGAAAGAATATCTAGTT+TGG 0.311636 5_2:+1920148 Msa0748670:CDS
TGCGACAATTTCGGAAGTTC+TGG 0.320575 5_2:-1919529 None:intergenic
GAGGAATTGAAAAGGATAAT+AGG 0.330421 5_2:+1921095 Msa0748670:CDS
ACAGATTTGAGTATGTTTAC+AGG 0.338166 5_2:-1919495 None:intergenic
AGTAGTTCATAATGGTAGTT+TGG 0.339363 5_2:+1920118 Msa0748670:CDS
TCCGACAACTGCGACAATTT+CGG 0.339879 5_2:-1919538 None:intergenic
TCATCTTCATTGCTGCTTTG+TGG 0.344899 5_2:-1919300 None:intergenic
AGGCTCTTCTTCAATGTGTT+TGG 0.355489 5_2:+1921045 Msa0748670:CDS
AGAGGAGGAAGAAGGACTAA+TGG 0.357148 5_2:-1919355 None:intergenic
GTAAGGTTATGAAATGAAAA+AGG 0.362567 5_2:-1919459 None:intergenic
TCCGAAATTGTCGCAGTTGT+CGG 0.365221 5_2:+1919537 Msa0748670:CDS
TATTGAGCTTCTTTCTTCAA+TGG 0.373596 5_2:+1919998 Msa0748670:CDS
TGCTATTTGGTGCAAAGTTT+AGG 0.383875 5_2:+1919748 Msa0748670:CDS
ATAGAAAGTTTGTATGAAGT+TGG 0.398152 5_2:-1919396 None:intergenic
ATGAATGTGGGGATAATGTT+TGG 0.399232 5_2:+1921121 Msa0748670:CDS
TTGGTTCATACTTGCTAGAA+AGG 0.405357 5_2:+1921171 Msa0748670:CDS
GAGGAAAGAATATCTAGTTT+GGG 0.410082 5_2:+1920149 Msa0748670:CDS
GTCACTTTATAGGTACCCTT+TGG 0.413810 5_2:+1920970 Msa0748670:CDS
CATGGTTCAGTAGTTCATAA+TGG 0.414950 5_2:+1920110 Msa0748670:CDS
GTTCCTGTTTATTGGATTGT+TGG 0.415072 5_2:+1920728 Msa0748670:CDS
TTTATAAGGGTGCAAAGTAT+AGG 0.421068 5_2:-1919430 None:intergenic
TAATTTCCATTGAAAATTCA+AGG 0.423262 5_2:-1920199 None:intergenic
TTGAGTATGTTTACAGGATG+TGG 0.432375 5_2:-1919489 None:intergenic
AACTGAGATGGAGTACTCAT+AGG 0.433338 5_2:-1919657 None:intergenic
GAATTTCCTGAAATGAAATC+AGG 0.440802 5_2:-1920851 None:intergenic
TTTGTGTTATATTGTAGTCT+TGG 0.445088 5_2:-1921197 None:intergenic
AGTCCAACAATCCAATAAAC+AGG 0.447233 5_2:-1920731 None:intergenic
GCGCCAGAGGAAGAAAATAT+TGG 0.458120 5_2:+1920296 Msa0748670:CDS
CATTACTCACAAATGAGTAT+TGG 0.461523 5_2:+1920996 Msa0748670:CDS
GAAGAGTAGAGGAATTGAAA+AGG 0.462131 5_2:+1921087 Msa0748670:CDS
TTCTTCCTCTGGCGCCCACA+TGG 0.463384 5_2:-1920288 None:intergenic
ACAAATGAGTATTGGAATGT+TGG 0.467373 5_2:+1921004 Msa0748670:CDS
AGAAAACTTAATGCAAGAGT+TGG 0.471555 5_2:+1919809 Msa0748670:CDS
GATAATAGGTGGATGAATGT+GGG 0.494751 5_2:+1921109 Msa0748670:CDS
TGTTTGGCTCATTGTGCTGA+TGG 0.495651 5_2:+1920793 Msa0748670:CDS
AAGTTCTTGATCCTTTCTCA+TGG 0.500770 5_2:+1920092 Msa0748670:CDS
TGATGGAAAGAGGAGGAAGA+AGG 0.502269 5_2:-1919363 None:intergenic
GAAAACTTAATGCAAGAGTT+GGG 0.502738 5_2:+1919810 Msa0748670:CDS
AAGTTGGTGGTGGTGAATGA+TGG 0.509546 5_2:-1919380 None:intergenic
GTCTTGGATGAACCAACATC+AGG 0.510286 5_2:+1919948 Msa0748670:CDS
GCCCCGCGATTATTCTAAGA+AGG 0.513174 5_2:-1919584 None:intergenic
TATTGCAATATTCTATAGCT+AGG 0.515556 5_2:-1920062 None:intergenic
TCTTTGTTATGTAAACATGA+TGG 0.516504 5_2:+1920364 Msa0748670:CDS
GTGGATTTGCCTGTGCCACT+AGG 0.518548 5_2:-1919561 None:intergenic
GGATAATAGGTGGATGAATG+TGG 0.519604 5_2:+1921108 Msa0748670:CDS
GTTTCTTTCACTGTTAGAAG+TGG 0.520419 5_2:-1919723 None:intergenic
GAAGAGAATAGAGGTGTCTC+TGG 0.528157 5_2:+1919867 Msa0748670:CDS
GTTGGTGATGAAGAGAATAG+AGG 0.536648 5_2:+1919858 Msa0748670:CDS
AGAACAATGCAAGCATTAGT+TGG 0.538812 5_2:+1920452 Msa0748670:CDS
TCAAGGGCATTAAGTTGCAA+TGG 0.539923 5_2:-1920182 None:intergenic
ACTGAGATGGAGTACTCATA+GGG 0.540551 5_2:-1919656 None:intergenic
GACGGAATTGCAGAAAGGTT+AGG 0.541265 5_2:+1920521 Msa0748670:CDS
ACCCTTCTTAGAATAATCGC+GGG 0.541629 5_2:+1919582 Msa0748670:CDS
AATTTCCATTGAAAATTCAA+GGG 0.543217 5_2:-1920198 None:intergenic
GTTGTCGGACCTAGTGGCAC+AGG 0.545930 5_2:+1919552 Msa0748670:CDS
CGCGATTATTCTAAGAAGGG+TGG 0.548502 5_2:-1919580 None:intergenic
AAGTTCCATGTGGGCGCCAG+AGG 0.550753 5_2:+1920283 Msa0748670:CDS
TTTGATGTCTTGAAGAGTAG+AGG 0.550924 5_2:+1921076 Msa0748670:CDS
TCATCCAAGACTAAAATTGG+TGG 0.557739 5_2:-1919936 None:intergenic
GAACTACTGAACCATGAGAA+AGG 0.565110 5_2:-1920103 None:intergenic
AAAGTAAGAAAAGATGAAGA+CGG 0.565925 5_2:+1920503 Msa0748670:CDS
ACAATGCAAGCATTAGTTGG+TGG 0.573920 5_2:+1920455 Msa0748670:CDS
TGGTGGTGAATGATGGAAAG+AGG 0.577823 5_2:-1919373 None:intergenic
GTACTATCAAGTCCTGATGT+TGG 0.578825 5_2:-1919960 None:intergenic
GAAAGTTTGTATGAAGTTGG+TGG 0.588003 5_2:-1919393 None:intergenic
CACCCTTCTTAGAATAATCG+CGG 0.590184 5_2:+1919581 Msa0748670:CDS
TTGTGAGTAATGCATCCAAA+GGG 0.593834 5_2:-1920985 None:intergenic
CTCAATAACATGAAGAGCTG+AGG 0.595612 5_2:-1919982 None:intergenic
TTTGTGAGTAATGCATCCAA+AGG 0.595873 5_2:-1920986 None:intergenic
ATAATAGGTGGATGAATGTG+GGG 0.600146 5_2:+1921110 Msa0748670:CDS
ATGAAGACGGAATTGCAGAA+AGG 0.601418 5_2:+1920516 Msa0748670:CDS
GTCGCAGTTGTCGGACCTAG+TGG 0.601969 5_2:+1919546 Msa0748670:CDS
CCCCGCGATTATTCTAAGAA+GGG 0.609515 5_2:-1919583 None:intergenic
AAAGTGAAGGCACTGAGTGA+AGG 0.609914 5_2:-1920758 None:intergenic
GGAAATGAGTGTTTCTCACA+AGG 0.614406 5_2:+1921025 Msa0748670:CDS
AACAATCCAATAAACAGGAA+CGG 0.620051 5_2:-1920726 None:intergenic
TGGTAGTTTGGAATCACTAG+AGG 0.621461 5_2:+1920130 Msa0748670:CDS
CTAATGAAAGAAGCATCAAG+AGG 0.625034 5_2:+1920623 Msa0748670:CDS
AAGGGTGCAAAGTATAGGTG+AGG 0.627199 5_2:-1919425 None:intergenic
CAATGGTTAAATCAAAGCAA+AGG 0.631202 5_2:+1920015 Msa0748670:CDS
AGTTTGTATGAAGTTGGTGG+TGG 0.641153 5_2:-1919390 None:intergenic
AACAAAAGTGAAGAAAGTGA+AGG 0.663674 5_2:-1920771 None:intergenic
GAATTGAAAAGGATAATAGG+TGG 0.677565 5_2:+1921098 Msa0748670:CDS
GAGAATAGAGGTGTCTCTGG+TGG 0.691191 5_2:+1919870 Msa0748670:CDS
CCCTTCTTAGAATAATCGCG+GGG 0.704752 5_2:+1919583 Msa0748670:CDS
TGGTGAATGATGGAAAGAGG+AGG 0.707045 5_2:-1919370 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAGGAATGGTTTTATAA+GGG - chr5_2:1919446-1919465 None:intergenic 20.0%
!! AATTTCCATTGAAAATTCAA+GGG - chr5_2:1920201-1920220 None:intergenic 20.0%
!! TAATTTCCATTGAAAATTCA+AGG - chr5_2:1920202-1920221 None:intergenic 20.0%
!!! TTTCTTTTTCATATTGTGAT+TGG - chr5_2:1920334-1920353 None:intergenic 20.0%
!!! CAATATGAAAAAGAAAGTTT+TGG + chr5_2:1920338-1920357 Msa0748670:CDS 20.0%
!! AAAGATACTACAAACAAAAA+AGG - chr5_2:1920698-1920717 None:intergenic 20.0%
!!! TACATAAAAAGCCAATATTT+TGG - chr5_2:1920944-1920963 None:intergenic 20.0%
!!! AAAAAGGAATGGTTTTATAA+GGG - chr5_2:1919446-1919465 None:intergenic 20.0%
!! AATTTCCATTGAAAATTCAA+GGG - chr5_2:1920201-1920220 None:intergenic 20.0%
!! TAATTTCCATTGAAAATTCA+AGG - chr5_2:1920202-1920221 None:intergenic 20.0%
!!! TTTCTTTTTCATATTGTGAT+TGG - chr5_2:1920334-1920353 None:intergenic 20.0%
!!! CAATATGAAAAAGAAAGTTT+TGG + chr5_2:1920338-1920357 Msa0748670:CDS 20.0%
!! AAAGATACTACAAACAAAAA+AGG - chr5_2:1920698-1920717 None:intergenic 20.0%
!!! TACATAAAAAGCCAATATTT+TGG - chr5_2:1920944-1920963 None:intergenic 20.0%
! ATAGAAAGTTTGTATGAAGT+TGG - chr5_2:1919399-1919418 None:intergenic 25.0%
!!! GAAAAAGGAATGGTTTTATA+AGG - chr5_2:1919447-1919466 None:intergenic 25.0%
! GTTATGAAATGAAAAAGGAA+TGG - chr5_2:1919457-1919476 None:intergenic 25.0%
! GTAAGGTTATGAAATGAAAA+AGG - chr5_2:1919462-1919481 None:intergenic 25.0%
!!! TCATTGATTGAGATAGTTTT+GGG - chr5_2:1919633-1919652 None:intergenic 25.0%
!!! ATCATTGATTGAGATAGTTT+TGG - chr5_2:1919634-1919653 None:intergenic 25.0%
!! ACTCTTAATTCTCTTTCTTT+TGG - chr5_2:1919789-1919808 None:intergenic 25.0%
! TATTGCAATATTCTATAGCT+AGG - chr5_2:1920065-1920084 None:intergenic 25.0%
!! TCTTTGTTATGTAAACATGA+TGG + chr5_2:1920364-1920383 Msa0748670:CDS 25.0%
!!! TATTTCTGTGTTCAAGATTT+TGG + chr5_2:1920393-1920412 Msa0748670:CDS 25.0%
! AAAGTAAGAAAAGATGAAGA+CGG + chr5_2:1920503-1920522 Msa0748670:CDS 25.0%
!!! TATTTTGGAATACTCTCTTT+TGG - chr5_2:1920929-1920948 None:intergenic 25.0%
!!! AAGAGAGTATTCCAAAATAT+TGG + chr5_2:1920930-1920949 Msa0748670:CDS 25.0%
!!! TGTATTATGTGTCACTTTAT+AGG + chr5_2:1920960-1920979 Msa0748670:CDS 25.0%
! ATAGAAAGTTTGTATGAAGT+TGG - chr5_2:1919399-1919418 None:intergenic 25.0%
!!! GAAAAAGGAATGGTTTTATA+AGG - chr5_2:1919447-1919466 None:intergenic 25.0%
! GTTATGAAATGAAAAAGGAA+TGG - chr5_2:1919457-1919476 None:intergenic 25.0%
! GTAAGGTTATGAAATGAAAA+AGG - chr5_2:1919462-1919481 None:intergenic 25.0%
!!! TCATTGATTGAGATAGTTTT+GGG - chr5_2:1919633-1919652 None:intergenic 25.0%
!!! ATCATTGATTGAGATAGTTT+TGG - chr5_2:1919634-1919653 None:intergenic 25.0%
!! ACTCTTAATTCTCTTTCTTT+TGG - chr5_2:1919789-1919808 None:intergenic 25.0%
! TATTGCAATATTCTATAGCT+AGG - chr5_2:1920065-1920084 None:intergenic 25.0%
!! TCTTTGTTATGTAAACATGA+TGG + chr5_2:1920364-1920383 Msa0748670:CDS 25.0%
!!! TATTTCTGTGTTCAAGATTT+TGG + chr5_2:1920393-1920412 Msa0748670:CDS 25.0%
! AAAGTAAGAAAAGATGAAGA+CGG + chr5_2:1920503-1920522 Msa0748670:CDS 25.0%
!!! TATTTTGGAATACTCTCTTT+TGG - chr5_2:1920929-1920948 None:intergenic 25.0%
!!! AAGAGAGTATTCCAAAATAT+TGG + chr5_2:1920930-1920949 Msa0748670:CDS 25.0%
!!! TGTATTATGTGTCACTTTAT+AGG + chr5_2:1920960-1920979 Msa0748670:CDS 25.0%
! TTTATAAGGGTGCAAAGTAT+AGG - chr5_2:1919433-1919452 None:intergenic 30.0%
ACAGATTTGAGTATGTTTAC+AGG - chr5_2:1919498-1919517 None:intergenic 30.0%
! CATATTTTTCTCAACTGAGA+TGG - chr5_2:1919672-1919691 None:intergenic 30.0%
TCTCAGTTGAGAAAAATATG+TGG + chr5_2:1919672-1919691 Msa0748670:CDS 30.0%
!! GTGAAAGAAACTTTGCTATT+TGG + chr5_2:1919735-1919754 Msa0748670:CDS 30.0%
AGAAAACTTAATGCAAGAGT+TGG + chr5_2:1919809-1919828 Msa0748670:CDS 30.0%
GAAAACTTAATGCAAGAGTT+GGG + chr5_2:1919810-1919829 Msa0748670:CDS 30.0%
!! GAAAGAAAAAGGGTATCAAT+TGG + chr5_2:1919894-1919913 Msa0748670:CDS 30.0%
TATTGAGCTTCTTTCTTCAA+TGG + chr5_2:1919998-1920017 Msa0748670:CDS 30.0%
CAATGGTTAAATCAAAGCAA+AGG + chr5_2:1920015-1920034 Msa0748670:CDS 30.0%
AGTAGTTCATAATGGTAGTT+TGG + chr5_2:1920118-1920137 Msa0748670:CDS 30.0%
AGAGGAAAGAATATCTAGTT+TGG + chr5_2:1920148-1920167 Msa0748670:CDS 30.0%
! GAGGAAAGAATATCTAGTTT+GGG + chr5_2:1920149-1920168 Msa0748670:CDS 30.0%
! TAATGCCCTTGAATTTTCAA+TGG + chr5_2:1920193-1920212 Msa0748670:CDS 30.0%
GTTCTCTCTTGAAGATATAT+TGG - chr5_2:1920599-1920618 None:intergenic 30.0%
! AGGAAGAAAAACAAAAGTGT+TGG - chr5_2:1920678-1920697 None:intergenic 30.0%
AACAATCCAATAAACAGGAA+CGG - chr5_2:1920729-1920748 None:intergenic 30.0%
AACAAAAGTGAAGAAAGTGA+AGG - chr5_2:1920774-1920793 None:intergenic 30.0%
!!! CTTTCTTCACTTTTGTTGTT+TGG + chr5_2:1920777-1920796 Msa0748670:CDS 30.0%
GAATTTCCTGAAATGAAATC+AGG - chr5_2:1920854-1920873 None:intergenic 30.0%
GTATCCAGAGAATAGAAAAA+AGG - chr5_2:1920900-1920919 None:intergenic 30.0%
CATTACTCACAAATGAGTAT+TGG + chr5_2:1920996-1921015 Msa0748670:CDS 30.0%
!! ACAAATGAGTATTGGAATGT+TGG + chr5_2:1921004-1921023 Msa0748670:CDS 30.0%
GAGGAATTGAAAAGGATAAT+AGG + chr5_2:1921095-1921114 Msa0748670:CDS 30.0%
GAATTGAAAAGGATAATAGG+TGG + chr5_2:1921098-1921117 Msa0748670:CDS 30.0%
! TTTATAAGGGTGCAAAGTAT+AGG - chr5_2:1919433-1919452 None:intergenic 30.0%
ACAGATTTGAGTATGTTTAC+AGG - chr5_2:1919498-1919517 None:intergenic 30.0%
! CATATTTTTCTCAACTGAGA+TGG - chr5_2:1919672-1919691 None:intergenic 30.0%
TCTCAGTTGAGAAAAATATG+TGG + chr5_2:1919672-1919691 Msa0748670:CDS 30.0%
!! GTGAAAGAAACTTTGCTATT+TGG + chr5_2:1919735-1919754 Msa0748670:CDS 30.0%
AGAAAACTTAATGCAAGAGT+TGG + chr5_2:1919809-1919828 Msa0748670:CDS 30.0%
GAAAACTTAATGCAAGAGTT+GGG + chr5_2:1919810-1919829 Msa0748670:CDS 30.0%
!! GAAAGAAAAAGGGTATCAAT+TGG + chr5_2:1919894-1919913 Msa0748670:CDS 30.0%
TATTGAGCTTCTTTCTTCAA+TGG + chr5_2:1919998-1920017 Msa0748670:CDS 30.0%
CAATGGTTAAATCAAAGCAA+AGG + chr5_2:1920015-1920034 Msa0748670:CDS 30.0%
AGTAGTTCATAATGGTAGTT+TGG + chr5_2:1920118-1920137 Msa0748670:CDS 30.0%
AGAGGAAAGAATATCTAGTT+TGG + chr5_2:1920148-1920167 Msa0748670:CDS 30.0%
! GAGGAAAGAATATCTAGTTT+GGG + chr5_2:1920149-1920168 Msa0748670:CDS 30.0%
! TAATGCCCTTGAATTTTCAA+TGG + chr5_2:1920193-1920212 Msa0748670:CDS 30.0%
GTTCTCTCTTGAAGATATAT+TGG - chr5_2:1920599-1920618 None:intergenic 30.0%
! AGGAAGAAAAACAAAAGTGT+TGG - chr5_2:1920678-1920697 None:intergenic 30.0%
AACAATCCAATAAACAGGAA+CGG - chr5_2:1920729-1920748 None:intergenic 30.0%
AACAAAAGTGAAGAAAGTGA+AGG - chr5_2:1920774-1920793 None:intergenic 30.0%
!!! CTTTCTTCACTTTTGTTGTT+TGG + chr5_2:1920777-1920796 Msa0748670:CDS 30.0%
GAATTTCCTGAAATGAAATC+AGG - chr5_2:1920854-1920873 None:intergenic 30.0%
GTATCCAGAGAATAGAAAAA+AGG - chr5_2:1920900-1920919 None:intergenic 30.0%
CATTACTCACAAATGAGTAT+TGG + chr5_2:1920996-1921015 Msa0748670:CDS 30.0%
!! ACAAATGAGTATTGGAATGT+TGG + chr5_2:1921004-1921023 Msa0748670:CDS 30.0%
GAGGAATTGAAAAGGATAAT+AGG + chr5_2:1921095-1921114 Msa0748670:CDS 30.0%
GAATTGAAAAGGATAATAGG+TGG + chr5_2:1921098-1921117 Msa0748670:CDS 30.0%
GAAAGTTTGTATGAAGTTGG+TGG - chr5_2:1919396-1919415 None:intergenic 35.0%
TTGAGTATGTTTACAGGATG+TGG - chr5_2:1919492-1919511 None:intergenic 35.0%
GTTTCTTTCACTGTTAGAAG+TGG - chr5_2:1919726-1919745 None:intergenic 35.0%
!! TGCTATTTGGTGCAAAGTTT+AGG + chr5_2:1919748-1919767 Msa0748670:CDS 35.0%
!!! CATGTAGCACATAGTTTTGT+TGG + chr5_2:1919840-1919859 Msa0748670:CDS 35.0%
!! CAATCCACCAATTTTAGTCT+TGG + chr5_2:1919932-1919951 Msa0748670:CDS 35.0%
TCATCCAAGACTAAAATTGG+TGG - chr5_2:1919939-1919958 None:intergenic 35.0%
GGTTCATCCAAGACTAAAAT+TGG - chr5_2:1919942-1919961 None:intergenic 35.0%
AAGTTCTTGATCCTTTCTCA+TGG + chr5_2:1920092-1920111 Msa0748670:CDS 35.0%
CATGGTTCAGTAGTTCATAA+TGG + chr5_2:1920110-1920129 Msa0748670:CDS 35.0%
! TTCTTTTCCAAGTTCCATGT+GGG + chr5_2:1920274-1920293 Msa0748670:CDS 35.0%
! CTTCCAATATTTTCTTCCTC+TGG - chr5_2:1920302-1920321 None:intergenic 35.0%
AGAACAATGCAAGCATTAGT+TGG + chr5_2:1920452-1920471 Msa0748670:CDS 35.0%
!! CTAATGAAAGAAGCATCAAG+AGG + chr5_2:1920623-1920642 Msa0748670:CDS 35.0%
! TTTTTGCCGTTCCTGTTTAT+TGG + chr5_2:1920720-1920739 Msa0748670:CDS 35.0%
GTTCCTGTTTATTGGATTGT+TGG + chr5_2:1920728-1920747 Msa0748670:CDS 35.0%
AGTCCAACAATCCAATAAAC+AGG - chr5_2:1920734-1920753 None:intergenic 35.0%
TTGTGAGTAATGCATCCAAA+GGG - chr5_2:1920988-1921007 None:intergenic 35.0%
TTTGTGAGTAATGCATCCAA+AGG - chr5_2:1920989-1921008 None:intergenic 35.0%
TCTTCAATGTGTTTGGTTAC+TGG + chr5_2:1921052-1921071 Msa0748670:CDS 35.0%
TTTGATGTCTTGAAGAGTAG+AGG + chr5_2:1921076-1921095 Msa0748670:CDS 35.0%
GAAGAGTAGAGGAATTGAAA+AGG + chr5_2:1921087-1921106 Msa0748670:CDS 35.0%
GATAATAGGTGGATGAATGT+GGG + chr5_2:1921109-1921128 Msa0748670:CDS 35.0%
ATAATAGGTGGATGAATGTG+GGG + chr5_2:1921110-1921129 Msa0748670:CDS 35.0%
ATGAATGTGGGGATAATGTT+TGG + chr5_2:1921121-1921140 Msa0748670:CDS 35.0%
TGTTCTATCGTTTGCTTTGT+TGG + chr5_2:1921152-1921171 Msa0748670:CDS 35.0%
! TTGGTTCATACTTGCTAGAA+AGG + chr5_2:1921171-1921190 Msa0748670:CDS 35.0%
GAAAGTTTGTATGAAGTTGG+TGG - chr5_2:1919396-1919415 None:intergenic 35.0%
TTGAGTATGTTTACAGGATG+TGG - chr5_2:1919492-1919511 None:intergenic 35.0%
GTTTCTTTCACTGTTAGAAG+TGG - chr5_2:1919726-1919745 None:intergenic 35.0%
!! TGCTATTTGGTGCAAAGTTT+AGG + chr5_2:1919748-1919767 Msa0748670:CDS 35.0%
!!! CATGTAGCACATAGTTTTGT+TGG + chr5_2:1919840-1919859 Msa0748670:CDS 35.0%
!! CAATCCACCAATTTTAGTCT+TGG + chr5_2:1919932-1919951 Msa0748670:CDS 35.0%
TCATCCAAGACTAAAATTGG+TGG - chr5_2:1919939-1919958 None:intergenic 35.0%
GGTTCATCCAAGACTAAAAT+TGG - chr5_2:1919942-1919961 None:intergenic 35.0%
AAGTTCTTGATCCTTTCTCA+TGG + chr5_2:1920092-1920111 Msa0748670:CDS 35.0%
CATGGTTCAGTAGTTCATAA+TGG + chr5_2:1920110-1920129 Msa0748670:CDS 35.0%
! TTCTTTTCCAAGTTCCATGT+GGG + chr5_2:1920274-1920293 Msa0748670:CDS 35.0%
! CTTCCAATATTTTCTTCCTC+TGG - chr5_2:1920302-1920321 None:intergenic 35.0%
AGAACAATGCAAGCATTAGT+TGG + chr5_2:1920452-1920471 Msa0748670:CDS 35.0%
!! CTAATGAAAGAAGCATCAAG+AGG + chr5_2:1920623-1920642 Msa0748670:CDS 35.0%
! TTTTTGCCGTTCCTGTTTAT+TGG + chr5_2:1920720-1920739 Msa0748670:CDS 35.0%
GTTCCTGTTTATTGGATTGT+TGG + chr5_2:1920728-1920747 Msa0748670:CDS 35.0%
AGTCCAACAATCCAATAAAC+AGG - chr5_2:1920734-1920753 None:intergenic 35.0%
TTGTGAGTAATGCATCCAAA+GGG - chr5_2:1920988-1921007 None:intergenic 35.0%
TTTGTGAGTAATGCATCCAA+AGG - chr5_2:1920989-1921008 None:intergenic 35.0%
TCTTCAATGTGTTTGGTTAC+TGG + chr5_2:1921052-1921071 Msa0748670:CDS 35.0%
TTTGATGTCTTGAAGAGTAG+AGG + chr5_2:1921076-1921095 Msa0748670:CDS 35.0%
GAAGAGTAGAGGAATTGAAA+AGG + chr5_2:1921087-1921106 Msa0748670:CDS 35.0%
GATAATAGGTGGATGAATGT+GGG + chr5_2:1921109-1921128 Msa0748670:CDS 35.0%
ATAATAGGTGGATGAATGTG+GGG + chr5_2:1921110-1921129 Msa0748670:CDS 35.0%
ATGAATGTGGGGATAATGTT+TGG + chr5_2:1921121-1921140 Msa0748670:CDS 35.0%
TGTTCTATCGTTTGCTTTGT+TGG + chr5_2:1921152-1921171 Msa0748670:CDS 35.0%
! TTGGTTCATACTTGCTAGAA+AGG + chr5_2:1921171-1921190 Msa0748670:CDS 35.0%
!! TCATCTTCATTGCTGCTTTG+TGG - chr5_2:1919303-1919322 None:intergenic 40.0%
!! AGTTTGTATGAAGTTGGTGG+TGG - chr5_2:1919393-1919412 None:intergenic 40.0%
!!! CAGGATGTGGTTTTTGAGTA+AGG - chr5_2:1919479-1919498 None:intergenic 40.0%
CACCCTTCTTAGAATAATCG+CGG + chr5_2:1919581-1919600 Msa0748670:CDS 40.0%
ACCCTTCTTAGAATAATCGC+GGG + chr5_2:1919582-1919601 Msa0748670:CDS 40.0%
! ACTGAGATGGAGTACTCATA+GGG - chr5_2:1919659-1919678 None:intergenic 40.0%
! AACTGAGATGGAGTACTCAT+AGG - chr5_2:1919660-1919679 None:intergenic 40.0%
!! GTTGGTGATGAAGAGAATAG+AGG + chr5_2:1919858-1919877 Msa0748670:CDS 40.0%
! TCTCTGGTGGTGAAAGAAAA+AGG + chr5_2:1919883-1919902 Msa0748670:CDS 40.0%
! CTCTGGTGGTGAAAGAAAAA+GGG + chr5_2:1919884-1919903 Msa0748670:CDS 40.0%
GTACTATCAAGTCCTGATGT+TGG - chr5_2:1919963-1919982 None:intergenic 40.0%
CTCAATAACATGAAGAGCTG+AGG - chr5_2:1919985-1920004 None:intergenic 40.0%
GAACTACTGAACCATGAGAA+AGG - chr5_2:1920106-1920125 None:intergenic 40.0%
! TGGTAGTTTGGAATCACTAG+AGG + chr5_2:1920130-1920149 Msa0748670:CDS 40.0%
!! TCAAGGGCATTAAGTTGCAA+TGG - chr5_2:1920185-1920204 None:intergenic 40.0%
! GAAAAGAAGCTTCGTTTTCG+TGG - chr5_2:1920262-1920281 None:intergenic 40.0%
! CTTCTTTTCCAAGTTCCATG+TGG + chr5_2:1920273-1920292 Msa0748670:CDS 40.0%
ACAATGCAAGCATTAGTTGG+TGG + chr5_2:1920455-1920474 Msa0748670:CDS 40.0%
!! CAAGCATTAGTTGGTGGATT+TGG + chr5_2:1920461-1920480 Msa0748670:CDS 40.0%
ATGAAGACGGAATTGCAGAA+AGG + chr5_2:1920516-1920535 Msa0748670:CDS 40.0%
GTGTCTCCTGATTTCATTTC+AGG + chr5_2:1920845-1920864 Msa0748670:CDS 40.0%
TCACTCATATGCACAGTTCT+TGG + chr5_2:1920872-1920891 Msa0748670:CDS 40.0%
!!! GGAGCCTTTTTTCTATTCTC+TGG + chr5_2:1920893-1920912 Msa0748670:CDS 40.0%
! GTCACTTTATAGGTACCCTT+TGG + chr5_2:1920970-1920989 Msa0748670:CDS 40.0%
GGAAATGAGTGTTTCTCACA+AGG + chr5_2:1921025-1921044 Msa0748670:CDS 40.0%
AGGCTCTTCTTCAATGTGTT+TGG + chr5_2:1921045-1921064 Msa0748670:CDS 40.0%
GGATAATAGGTGGATGAATG+TGG + chr5_2:1921108-1921127 Msa0748670:CDS 40.0%
!! TCATCTTCATTGCTGCTTTG+TGG - chr5_2:1919303-1919322 None:intergenic 40.0%
!! AGTTTGTATGAAGTTGGTGG+TGG - chr5_2:1919393-1919412 None:intergenic 40.0%
!!! CAGGATGTGGTTTTTGAGTA+AGG - chr5_2:1919479-1919498 None:intergenic 40.0%
CACCCTTCTTAGAATAATCG+CGG + chr5_2:1919581-1919600 Msa0748670:CDS 40.0%
ACCCTTCTTAGAATAATCGC+GGG + chr5_2:1919582-1919601 Msa0748670:CDS 40.0%
! ACTGAGATGGAGTACTCATA+GGG - chr5_2:1919659-1919678 None:intergenic 40.0%
! AACTGAGATGGAGTACTCAT+AGG - chr5_2:1919660-1919679 None:intergenic 40.0%
!! GTTGGTGATGAAGAGAATAG+AGG + chr5_2:1919858-1919877 Msa0748670:CDS 40.0%
! TCTCTGGTGGTGAAAGAAAA+AGG + chr5_2:1919883-1919902 Msa0748670:CDS 40.0%
! CTCTGGTGGTGAAAGAAAAA+GGG + chr5_2:1919884-1919903 Msa0748670:CDS 40.0%
GTACTATCAAGTCCTGATGT+TGG - chr5_2:1919963-1919982 None:intergenic 40.0%
CTCAATAACATGAAGAGCTG+AGG - chr5_2:1919985-1920004 None:intergenic 40.0%
GAACTACTGAACCATGAGAA+AGG - chr5_2:1920106-1920125 None:intergenic 40.0%
! TGGTAGTTTGGAATCACTAG+AGG + chr5_2:1920130-1920149 Msa0748670:CDS 40.0%
!! TCAAGGGCATTAAGTTGCAA+TGG - chr5_2:1920185-1920204 None:intergenic 40.0%
! GAAAAGAAGCTTCGTTTTCG+TGG - chr5_2:1920262-1920281 None:intergenic 40.0%
! CTTCTTTTCCAAGTTCCATG+TGG + chr5_2:1920273-1920292 Msa0748670:CDS 40.0%
ACAATGCAAGCATTAGTTGG+TGG + chr5_2:1920455-1920474 Msa0748670:CDS 40.0%
!! CAAGCATTAGTTGGTGGATT+TGG + chr5_2:1920461-1920480 Msa0748670:CDS 40.0%
ATGAAGACGGAATTGCAGAA+AGG + chr5_2:1920516-1920535 Msa0748670:CDS 40.0%
GTGTCTCCTGATTTCATTTC+AGG + chr5_2:1920845-1920864 Msa0748670:CDS 40.0%
TCACTCATATGCACAGTTCT+TGG + chr5_2:1920872-1920891 Msa0748670:CDS 40.0%
!!! GGAGCCTTTTTTCTATTCTC+TGG + chr5_2:1920893-1920912 Msa0748670:CDS 40.0%
! GTCACTTTATAGGTACCCTT+TGG + chr5_2:1920970-1920989 Msa0748670:CDS 40.0%
GGAAATGAGTGTTTCTCACA+AGG + chr5_2:1921025-1921044 Msa0748670:CDS 40.0%
AGGCTCTTCTTCAATGTGTT+TGG + chr5_2:1921045-1921064 Msa0748670:CDS 40.0%
GGATAATAGGTGGATGAATG+TGG + chr5_2:1921108-1921127 Msa0748670:CDS 40.0%
AGAGGAGGAAGAAGGACTAA+TGG - chr5_2:1919358-1919377 None:intergenic 45.0%
TGATGGAAAGAGGAGGAAGA+AGG - chr5_2:1919366-1919385 None:intergenic 45.0%
! TGGTGAATGATGGAAAGAGG+AGG - chr5_2:1919373-1919392 None:intergenic 45.0%
! TGGTGGTGAATGATGGAAAG+AGG - chr5_2:1919376-1919395 None:intergenic 45.0%
!! AAGTTGGTGGTGGTGAATGA+TGG - chr5_2:1919383-1919402 None:intergenic 45.0%
! AAGGGTGCAAAGTATAGGTG+AGG - chr5_2:1919428-1919447 None:intergenic 45.0%
TGCGACAATTTCGGAAGTTC+TGG - chr5_2:1919532-1919551 None:intergenic 45.0%
TCCGAAATTGTCGCAGTTGT+CGG + chr5_2:1919537-1919556 Msa0748670:CDS 45.0%
TCCGACAACTGCGACAATTT+CGG - chr5_2:1919541-1919560 None:intergenic 45.0%
! CGCGATTATTCTAAGAAGGG+TGG - chr5_2:1919583-1919602 None:intergenic 45.0%
! CCCCGCGATTATTCTAAGAA+GGG - chr5_2:1919586-1919605 None:intergenic 45.0%
CCCTTCTTAGAATAATCGCG+GGG + chr5_2:1919583-1919602 Msa0748670:CDS 45.0%
!! GAAGAGAATAGAGGTGTCTC+TGG + chr5_2:1919867-1919886 Msa0748670:CDS 45.0%
GTCTTGGATGAACCAACATC+AGG + chr5_2:1919948-1919967 Msa0748670:CDS 45.0%
GCGCCAGAGGAAGAAAATAT+TGG + chr5_2:1920296-1920315 Msa0748670:CDS 45.0%
GACGGAATTGCAGAAAGGTT+AGG + chr5_2:1920521-1920540 Msa0748670:CDS 45.0%
!! AAAGTGAAGGCACTGAGTGA+AGG - chr5_2:1920761-1920780 None:intergenic 45.0%
! TGTTTGGCTCATTGTGCTGA+TGG + chr5_2:1920793-1920812 Msa0748670:CDS 45.0%
AGAGGAGGAAGAAGGACTAA+TGG - chr5_2:1919358-1919377 None:intergenic 45.0%
TGATGGAAAGAGGAGGAAGA+AGG - chr5_2:1919366-1919385 None:intergenic 45.0%
! TGGTGAATGATGGAAAGAGG+AGG - chr5_2:1919373-1919392 None:intergenic 45.0%
! TGGTGGTGAATGATGGAAAG+AGG - chr5_2:1919376-1919395 None:intergenic 45.0%
!! AAGTTGGTGGTGGTGAATGA+TGG - chr5_2:1919383-1919402 None:intergenic 45.0%
! AAGGGTGCAAAGTATAGGTG+AGG - chr5_2:1919428-1919447 None:intergenic 45.0%
TGCGACAATTTCGGAAGTTC+TGG - chr5_2:1919532-1919551 None:intergenic 45.0%
TCCGAAATTGTCGCAGTTGT+CGG + chr5_2:1919537-1919556 Msa0748670:CDS 45.0%
TCCGACAACTGCGACAATTT+CGG - chr5_2:1919541-1919560 None:intergenic 45.0%
! CGCGATTATTCTAAGAAGGG+TGG - chr5_2:1919583-1919602 None:intergenic 45.0%
! CCCCGCGATTATTCTAAGAA+GGG - chr5_2:1919586-1919605 None:intergenic 45.0%
CCCTTCTTAGAATAATCGCG+GGG + chr5_2:1919583-1919602 Msa0748670:CDS 45.0%
!! GAAGAGAATAGAGGTGTCTC+TGG + chr5_2:1919867-1919886 Msa0748670:CDS 45.0%
GTCTTGGATGAACCAACATC+AGG + chr5_2:1919948-1919967 Msa0748670:CDS 45.0%
GCGCCAGAGGAAGAAAATAT+TGG + chr5_2:1920296-1920315 Msa0748670:CDS 45.0%
GACGGAATTGCAGAAAGGTT+AGG + chr5_2:1920521-1920540 Msa0748670:CDS 45.0%
!! AAAGTGAAGGCACTGAGTGA+AGG - chr5_2:1920761-1920780 None:intergenic 45.0%
! TGTTTGGCTCATTGTGCTGA+TGG + chr5_2:1920793-1920812 Msa0748670:CDS 45.0%
! GCCCCGCGATTATTCTAAGA+AGG - chr5_2:1919587-1919606 None:intergenic 50.0%
!! GAGAATAGAGGTGTCTCTGG+TGG + chr5_2:1919870-1919889 Msa0748670:CDS 50.0%
! AGCTTCGTTTTCGTGGACGA+TGG - chr5_2:1920255-1920274 None:intergenic 50.0%
! GCCCCGCGATTATTCTAAGA+AGG - chr5_2:1919587-1919606 None:intergenic 50.0%
!! GAGAATAGAGGTGTCTCTGG+TGG + chr5_2:1919870-1919889 Msa0748670:CDS 50.0%
! AGCTTCGTTTTCGTGGACGA+TGG - chr5_2:1920255-1920274 None:intergenic 50.0%
! GTGGATTTGCCTGTGCCACT+AGG - chr5_2:1919564-1919583 None:intergenic 55.0%
! GTGGATTTGCCTGTGCCACT+AGG - chr5_2:1919564-1919583 None:intergenic 55.0%
GTCGCAGTTGTCGGACCTAG+TGG + chr5_2:1919546-1919565 Msa0748670:CDS 60.0%
GTTGTCGGACCTAGTGGCAC+AGG + chr5_2:1919552-1919571 Msa0748670:CDS 60.0%
TCTGGCGCCCACATGGAACT+TGG - chr5_2:1920284-1920303 None:intergenic 60.0%
AAGTTCCATGTGGGCGCCAG+AGG + chr5_2:1920283-1920302 Msa0748670:CDS 60.0%
TTCTTCCTCTGGCGCCCACA+TGG - chr5_2:1920291-1920310 None:intergenic 60.0%
GTCGCAGTTGTCGGACCTAG+TGG + chr5_2:1919546-1919565 Msa0748670:CDS 60.0%
GTTGTCGGACCTAGTGGCAC+AGG + chr5_2:1919552-1919571 Msa0748670:CDS 60.0%
TCTGGCGCCCACATGGAACT+TGG - chr5_2:1920284-1920303 None:intergenic 60.0%
AAGTTCCATGTGGGCGCCAG+AGG + chr5_2:1920283-1920302 Msa0748670:CDS 60.0%
TTCTTCCTCTGGCGCCCACA+TGG - chr5_2:1920291-1920310 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 1919282 1921213 1919282 ID=Msa0748670;Name=Msa0748670
chr5_2 mRNA 1919282 1921213 1919282 ID=Msa0748670-mRNA-1;Parent=Msa0748670;Name=Msa0748670-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|643
chr5_2 exon 1919282 1921213 1919282 ID=Msa0748670-mRNA-1:exon:560;Parent=Msa0748670-mRNA-1
chr5_2 CDS 1919282 1921213 1919282 ID=Msa0748670-mRNA-1:cds;Parent=Msa0748670-mRNA-1
Gene Sequence

>Msa0748670

ATGGCATCTTGCTTGAAACCACAAAGCAGCAATGAAGATGATTCTGTCATACTCTTTTCAACTTCTAATTCTTCCATTAGTCCTTCTTCCTCCTCTTTCCATCATTCACCACCACCAACTTCATACAAACTTTCTATTAAAAACCTCACCTATACTTTGCACCCTTATAAAACCATTCCTTTTTCATTTCATAACCTTACTCAAAAACCACATCCTGTAAACATACTCAAATCTGTTTCTTTTGTTGCCAGAACTTCCGAAATTGTCGCAGTTGTCGGACCTAGTGGCACAGGCAAATCCACCCTTCTTAGAATAATCGCGGGGCGAGTAAAAGACAAAGATTTCAATCCCAAAACTATCTCAATCAATGATCACCCTATGAGTACTCCATCTCAGTTGAGAAAAATATGTGGCTTTGTTTCACAAGAAGACAACTTGCTTCCACTTCTAACAGTGAAAGAAACTTTGCTATTTGGTGCAAAGTTTAGGCTAAAAGAAATGACACCAAAAGAAAGAGAATTAAGAGTAGAAAACTTAATGCAAGAGTTGGGACTTTTTCATGTAGCACATAGTTTTGTTGGTGATGAAGAGAATAGAGGTGTCTCTGGTGGTGAAAGAAAAAGGGTATCAATTGGTGTTGATATGATTCACAATCCACCAATTTTAGTCTTGGATGAACCAACATCAGGACTTGATAGTACCTCAGCTCTTCATGTTATTGAGCTTCTTTCTTCAATGGTTAAATCAAAGCAAAGGATAGTGATACTTTCAATTCATCAACCTAGCTATAGAATATTGCAATATATTTCTAAGTTCTTGATCCTTTCTCATGGTTCAGTAGTTCATAATGGTAGTTTGGAATCACTAGAGGAAAGAATATCTAGTTTGGGATTTCAAATTCCATTGCAACTTAATGCCCTTGAATTTTCAATGGAAATTATACAAAGTTTAGAAGATAATTCTAGTAGTTCCATCGTCCACGAAAACGAAGCTTCTTTTCCAAGTTCCATGTGGGCGCCAGAGGAAGAAAATATTGGAAGTGAAGTTTTCCAATCACAATATGAAAAAGAAAGTTTTGGATATCTTTGTTATGTAAACATGATGGAGATACTATTTCTGTGTTCAAGATTTTGGAAGATTATTTATAGAACAAAGCAACTTTTTTTAGCTAGAACAATGCAAGCATTAGTTGGTGGATTTGGTTTAGCAAGTGTTTATATAAAAGTAAGAAAAGATGAAGACGGAATTGCAGAAAGGTTAGGTCTGTTTGCATTTAGTCTCAGTTTTCTCTTGTCTTCAACAGTTGAAGCACTTCCAATATATCTTCAAGAGAGAACTGTTCTAATGAAAGAAGCATCAAGAGGAGCTTACAGAATCTCTTCTTACTTGATAGCCAACACTTTTGTTTTTCTTCCTTTTTTGTTTGTAGTATCTTTACTTTTTGCCGTTCCTGTTTATTGGATTGTTGGACTCAATCCTTCACTCAGTGCCTTCACTTTCTTCACTTTTGTTGTTTGGCTCATTGTGCTGATGGCAAGTTCTTTAGTTCTCTTTTTGAGTTCTGTGTCTCCTGATTTCATTTCAGGAAATTCACTCATATGCACAGTTCTTGGAGCCTTTTTTCTATTCTCTGGATACTTCATTCCAAAAGAGAGTATTCCAAAATATTGGCTTTTTATGTATTATGTGTCACTTTATAGGTACCCTTTGGATGCATTACTCACAAATGAGTATTGGAATGTTGGAAATGAGTGTTTCTCACAAGGCTCTTCTTCAATGTGTTTGGTTACTGGATTTGATGTCTTGAAGAGTAGAGGAATTGAAAAGGATAATAGGTGGATGAATGTGGGGATAATGTTTGGATTCTTTGTGTTCTATCGTTTGCTTTGTTGGTTCATACTTGCTAGAAAGGCTTCCAAGACTACAATATAA
Protein sequence

>Msa0748670

MASCLKPQSSNEDDSVILFSTSNSSISPSSSSFHHSPPPTSYKLSIKNLTYTLHPYKTIPFSFHNLTQKPHPVNILKSVSFVARTSEIVAVVGPSGTGKSTLLRIIAGRVKDKDFNPKTISINDHPMSTPSQLRKICGFVSQEDNLLPLLTVKETLLFGAKFRLKEMTPKERELRVENLMQELGLFHVAHSFVGDEENRGVSGGERKRVSIGVDMIHNPPILVLDEPTSGLDSTSALHVIELLSSMVKSKQRIVILSIHQPSYRILQYISKFLILSHGSVVHNGSLESLEERISSLGFQIPLQLNALEFSMEIIQSLEDNSSSSIVHENEASFPSSMWAPEEENIGSEVFQSQYEKESFGYLCYVNMMEILFLCSRFWKIIYRTKQLFLARTMQALVGGFGLASVYIKVRKDEDGIAERLGLFAFSLSFLLSSTVEALPIYLQERTVLMKEASRGAYRISSYLIANTFVFLPFLFVVSLLFAVPVYWIVGLNPSLSAFTFFTFVVWLIVLMASSLVLFLSSVSPDFISGNSLICTVLGAFFLFSGYFIPKESIPKYWLFMYYVSLYRYPLDALLTNEYWNVGNECFSQGSSSMCLVTGFDVLKSRGIEKDNRWMNVGIMFGFFVFYRLLCWFILARKASKTTI*