AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0651030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0651030 MtrunA17_Chr4g0043371 93.585 265 17 0 1 265 1 265 0.0 527
Msa0651030 MtrunA17_Chr3g0115621 50.628 239 112 4 29 263 6 242 1.02e-79 240
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0651030 AT4G38260.1 56.884 276 105 7 1 265 1 273 1.69e-106 310
Msa0651030 AT1G20740.2 33.094 278 148 15 1 261 1 257 7.24e-28 107
Msa0651030 AT1G20730.1 33.205 259 140 12 1 246 1 239 2.76e-27 106
Msa0651030 AT1G20680.2 28.571 273 172 11 1 261 1 262 8.64e-25 99.8
Msa0651030 AT1G20740.1 33.466 251 130 14 28 261 35 265 4.10e-24 98.2
Msa0651030 AT1G20680.1 28.049 246 154 11 28 261 36 270 3.23e-18 82.4

Find 105 sgRNAs with CRISPR-Local

Find 298 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGCTATGCAGAACTTTAT+AGG 0.199781 4_3:-58307144 None:intergenic
AAGAGGAGGAAAGGGTATTT+TGG 0.220988 4_3:-58305344 None:intergenic
TGGGAGATCGCCTCTAGTTT+TGG 0.223738 4_3:-58305625 None:intergenic
ATCTTGGAGTTCTCTAAAAT+TGG 0.229435 4_3:-58305592 None:intergenic
TCAGATTGTCACATCTGATT+TGG 0.243610 4_3:+58307005 Msa0651030:three_prime_UTR
TCTCCCACTTCGATTTATTC+AGG 0.281725 4_3:+58305641 Msa0651030:CDS
CTCAAAGGAAATTCAAATTC+TGG 0.291452 4_3:-58306307 None:intergenic
AAAGAGCTTATTGATGAGTA+TGG 0.307520 4_3:+58306190 Msa0651030:CDS
CAATAAGCTCTTTGAAACTA+TGG 0.309883 4_3:-58306180 None:intergenic
CAGATTGTCACATCTGATTT+GGG 0.316989 4_3:+58307006 Msa0651030:three_prime_UTR
TGATCCAATCCTCACTAAAC+AGG 0.340954 4_3:-58306731 None:intergenic
CAATGGTTTATGTCTTCAAT+AGG 0.356326 4_3:+58305971 Msa0651030:CDS
GGTATCACTATAACGTATAA+AGG 0.377921 4_3:-58306821 None:intergenic
ACAGAAAGATAACCATGATT+TGG 0.383345 4_3:-58305994 None:intergenic
TGAATTTCCTATAAAAGAAA+TGG 0.389311 4_3:+58306219 Msa0651030:CDS
AATGAGCACATGCTCACCTT+GGG 0.414957 4_3:+58306865 Msa0651030:three_prime_UTR
TTAGTCAAGACGTGAATTCC+AGG 0.415005 4_3:-58306021 None:intergenic
AAAGTGAAATTTCCCTCAAA+AGG 0.416191 4_3:-58307113 None:intergenic
TGTAGAACATTGCGGCCTAC+TGG 0.422844 4_3:+58307083 Msa0651030:three_prime_UTR
GGTTATCTTTCTGTTACCCC+TGG 0.432020 4_3:+58306003 Msa0651030:CDS
ATTCGTCTCTGTTGAGTAAG+AGG 0.443519 4_3:-58305361 None:intergenic
TTACCCTGTTTAGTGAGGAT+TGG 0.451636 4_3:+58306727 Msa0651030:three_prime_UTR
TGGGACGGCGAAACAATCTT+AGG 0.452901 4_3:+58305501 Msa0651030:CDS
CACATTCTATGAGAAACATC+TGG 0.464669 4_3:+58306510 Msa0651030:CDS
ACAGAGACGAATTTCATTCT+CGG 0.465466 4_3:+58305372 Msa0651030:CDS
CACTTCCTCCGCAAACTCCT+CGG 0.469339 4_3:-58305887 None:intergenic
TGATATTTGCACCTCCTCAA+TGG 0.469875 4_3:+58305954 Msa0651030:CDS
CTTAGGGGCCGTATGGTACT+AGG 0.472770 4_3:+58306449 Msa0651030:intron
CGTCTTGACTAATGCACCAT+TGG 0.481062 4_3:+58306032 Msa0651030:CDS
CTGAAACCGGTGCATGGTGC+AGG 0.482539 4_3:-58306842 None:intergenic
CTCACTAAACAGGGTAAGAC+TGG 0.484155 4_3:-58306721 None:intergenic
TAAGAGTCCCGAGGAGTTTG+CGG 0.487909 4_3:+58305879 Msa0651030:CDS
GTCTTCAATAGGCCAAATCA+TGG 0.490436 4_3:+58305982 Msa0651030:CDS
TGTCGACACACAATTTCCTT+CGG 0.494369 4_3:+58306339 Msa0651030:CDS
GATGAAAAGTGCTTGCTACC+AGG 0.494938 4_3:+58306274 Msa0651030:CDS
ACTTCCTCCGCAAACTCCTC+GGG 0.500852 4_3:-58305886 None:intergenic
TGGTTACACTATTTATTACA+AGG 0.503107 4_3:+58305223 None:intergenic
GAATGAGCACATGCTCACCT+TGG 0.510868 4_3:+58306864 Msa0651030:three_prime_UTR
GCATGTGCTCATTCTGAAAC+CGG 0.521386 4_3:-58306855 None:intergenic
TCGCCGTCCCACCATGCCAA+TGG 0.523136 4_3:-58305489 None:intergenic
ACTAAAATACGACGGTCAGT+GGG 0.524749 4_3:+58305255 Msa0651030:five_prime_UTR
GTTTAGTTAGTTAGATACAA+TGG 0.527879 4_3:+58306628 Msa0651030:three_prime_UTR
CACCATGCCAATGGTTCTGT+AGG 0.531172 4_3:-58305480 None:intergenic
AACTAAAATACGACGGTCAG+TGG 0.531242 4_3:+58305254 Msa0651030:five_prime_UTR
ATGCACCATTGGATGCTCCT+TGG 0.531423 4_3:+58306043 Msa0651030:CDS
CGACACACAATTTCCTTCGG+TGG 0.533528 4_3:+58306342 Msa0651030:CDS
AACATCTGGATCAGAAGCAA+TGG 0.535521 4_3:+58306524 Msa0651030:CDS
GCTTGTGCTTAGGGGCCGTA+TGG 0.536592 4_3:+58306442 Msa0651030:intron
CTGTTGAGTAAGAGGAGGAA+AGG 0.536600 4_3:-58305353 None:intergenic
AAGCTCAGCTATGTGTATAA+CGG 0.547357 4_3:+58305301 Msa0651030:exon
AATTCTGGAGGACGAATCCC+TGG 0.548820 4_3:-58306292 None:intergenic
GCGGTAGAGATATACTCTGC+GGG 0.548843 4_3:+58305523 Msa0651030:CDS
GATCAGTGAGACACAGTGAA+TGG 0.554589 4_3:+58306570 Msa0651030:exon
ATGAAAAGTGCTTGCTACCA+GGG 0.555789 4_3:+58306275 Msa0651030:CDS
ACAAAGGCCTACAGAACCAT+TGG 0.556864 4_3:+58305473 Msa0651030:intron
TGTTGAGTAAGAGGAGGAAA+GGG 0.560808 4_3:-58305352 None:intergenic
CAGTCTTACCCTGTTTAGTG+AGG 0.567192 4_3:+58306722 Msa0651030:three_prime_UTR
TACAGAACCATTGGCATGGT+GGG 0.567524 4_3:+58305482 Msa0651030:CDS
TTAGTGAGGATTGGATCAGT+TGG 0.573193 4_3:+58306736 Msa0651030:three_prime_UTR
TGCAAATATCAGCTAATACA+AGG 0.587286 4_3:-58305942 None:intergenic
GTGATACCTGCACCATGCAC+CGG 0.588039 4_3:+58306836 Msa0651030:three_prime_UTR
GAACCATTGGCATGGTGGGA+CGG 0.589400 4_3:+58305486 Msa0651030:CDS
CTCATTCTGAAACCGGTGCA+TGG 0.591335 4_3:-58306848 None:intergenic
AACAACAAAATAATCCAAGA+GGG 0.596674 4_3:-58306790 None:intergenic
ATTGGATGCTCCTTGGCCAA+AGG 0.597415 4_3:+58306050 Msa0651030:CDS
CATGTGTATACCTTTGGCCA+AGG 0.607377 4_3:-58306060 None:intergenic
TAGTCAAGACGTGAATTCCA+GGG 0.609514 4_3:-58306020 None:intergenic
CTTAGTCGTGTAGAACATTG+CGG 0.610684 4_3:+58307075 Msa0651030:three_prime_UTR
TAAACAGGGTAAGACTGGAC+TGG 0.613878 4_3:-58306716 None:intergenic
TGTTAATTAGTTACCACCGA+AGG 0.614939 4_3:-58306355 None:intergenic
TCGACAAATATCGAACTCAA+AGG 0.618961 4_3:-58306322 None:intergenic
TTTGGCCAAGGAGCATCCAA+TGG 0.623802 4_3:-58306048 None:intergenic
ATTGACAAGGTGCTAGTGAG+TGG 0.628021 4_3:-58306656 None:intergenic
TCAAAAGGTTAAATTCCAGT+AGG 0.628605 4_3:-58307098 None:intergenic
ATTCCACAGCCCAAAACTAG+AGG 0.629616 4_3:+58305615 Msa0651030:CDS
ATTGAAGACATAAACCATTG+AGG 0.630572 4_3:-58305968 None:intergenic
CTATAAAGTTCTGCATAGCA+AGG 0.630966 4_3:+58307145 Msa0651030:three_prime_UTR
GAAGCAATGGAAAGAGAACA+TGG 0.634459 4_3:+58306537 Msa0651030:CDS
TTATAAATAAAAGTTCAGCA+TGG 0.635820 4_3:+58306945 Msa0651030:three_prime_UTR
CAACAACAAAATAATCCAAG+AGG 0.636564 4_3:-58306791 None:intergenic
ACTGGTTGATTAAATTCGTG+AGG 0.636764 4_3:-58306698 None:intergenic
AAAGGAAATTCAAATTCTGG+AGG 0.638483 4_3:-58306304 None:intergenic
CGTCTCTGTTGAGTAAGAGG+AGG 0.638986 4_3:-58305358 None:intergenic
TGACCTGAATAAATCGAAGT+GGG 0.641166 4_3:-58305644 None:intergenic
GGCCTACAGAACCATTGGCA+TGG 0.641777 4_3:+58305478 Msa0651030:intron
GAGTCCCGAGGAGTTTGCGG+AGG 0.641786 4_3:+58305882 Msa0651030:CDS
ATGAGCACATGCTCACCTTG+GGG 0.649404 4_3:+58306866 Msa0651030:three_prime_UTR
GATCCAATCCTCACTAAACA+GGG 0.653669 4_3:-58306730 None:intergenic
CGGTAGAGATATACTCTGCG+GGG 0.659645 4_3:+58305524 Msa0651030:CDS
ATGACCTGAATAAATCGAAG+TGG 0.662417 4_3:-58305645 None:intergenic
GAGGTGCTCCTAGTACCATA+CGG 0.663675 4_3:-58306457 None:intergenic
TGTGTATAACGGTGTTCATG+TGG 0.667575 4_3:+58305312 Msa0651030:CDS
GGCGGTAGAGATATACTCTG+CGG 0.672664 4_3:+58305522 Msa0651030:CDS
TGATGTAACAAACAAAGCAG+AGG 0.675989 4_3:-58306476 None:intergenic
ATAAAAGCAAGCTAGCCCCA+AGG 0.676555 4_3:-58306881 None:intergenic
ACAGAGTGATAAGAGTCCCG+AGG 0.677848 4_3:+58305870 Msa0651030:intron
TGCGGAGGAAGTGCTCAAAG+AGG 0.679372 4_3:+58305897 Msa0651030:CDS
GAAGACATAAACCATTGAGG+AGG 0.681667 4_3:-58305965 None:intergenic
CTACAGAACCATTGGCATGG+TGG 0.682886 4_3:+58305481 Msa0651030:CDS
CTAAAATACGACGGTCAGTG+GGG 0.692689 4_3:+58305256 Msa0651030:five_prime_UTR
AGTCAAGACGTGAATTCCAG+GGG 0.696129 4_3:-58306019 None:intergenic
ACAACAAAATAATCCAAGAG+GGG 0.699752 4_3:-58306789 None:intergenic
AAAGAGGCTCATCTATACAA+CGG 0.707692 4_3:+58305913 Msa0651030:CDS
GACGGCGAAACAATCTTAGG+CGG 0.730697 4_3:+58305504 Msa0651030:CDS
GGTAGAGATATACTCTGCGG+GGG 0.739093 4_3:+58305525 Msa0651030:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGGTTTTTTTTTAATATGTT+AGG + chr4_3:58305707-58305726 Msa0651030:intron 15.0%
!!! TGAACTTTTATTTATAAGAA+GGG - chr4_3:58306942-58306961 None:intergenic 15.0%
!!! TGGTTTTTTTTTAATATGTT+AGG + chr4_3:58305707-58305726 Msa0651030:intron 15.0%
!!! TGAACTTTTATTTATAAGAA+GGG - chr4_3:58306942-58306961 None:intergenic 15.0%
!!! ACTAAGTACATTTTTCATTA+AGG + chr4_3:58306144-58306163 Msa0651030:intron 20.0%
!! TGAATTTCCTATAAAAGAAA+TGG + chr4_3:58306219-58306238 Msa0651030:CDS 20.0%
!!! ACATTTTATTCATATTGACA+AGG - chr4_3:58306672-58306691 None:intergenic 20.0%
!!! CTGAACTTTTATTTATAAGA+AGG - chr4_3:58306943-58306962 None:intergenic 20.0%
!! TTATAAATAAAAGTTCAGCA+TGG + chr4_3:58306945-58306964 Msa0651030:three_prime_UTR 20.0%
!!! ACTAAGTACATTTTTCATTA+AGG + chr4_3:58306144-58306163 Msa0651030:intron 20.0%
!! TGAATTTCCTATAAAAGAAA+TGG + chr4_3:58306219-58306238 Msa0651030:CDS 20.0%
!!! ACATTTTATTCATATTGACA+AGG - chr4_3:58306672-58306691 None:intergenic 20.0%
!!! CTGAACTTTTATTTATAAGA+AGG - chr4_3:58306943-58306962 None:intergenic 20.0%
!! TTATAAATAAAAGTTCAGCA+TGG + chr4_3:58306945-58306964 Msa0651030:three_prime_UTR 20.0%
!! TTTTCCAAACTAAAATACGA+CGG + chr4_3:58305247-58305266 Msa0651030:five_prime_UTR 25.0%
!! TGTTTTACTCTTGAATACAA+AGG + chr4_3:58305457-58305476 Msa0651030:intron 25.0%
! TACTTAATATGACAAACAGA+TGG - chr4_3:58305676-58305695 None:intergenic 25.0%
! ATTAGTGGTTTATATGTTGT+TGG + chr4_3:58305845-58305864 Msa0651030:intron 25.0%
!! TTCTCAACCATTTCTTTTAT+AGG - chr4_3:58306229-58306248 None:intergenic 25.0%
! GTTTAGTTAGTTAGATACAA+TGG + chr4_3:58306628-58306647 Msa0651030:three_prime_UTR 25.0%
! AACAACAAAATAATCCAAGA+GGG - chr4_3:58306793-58306812 None:intergenic 25.0%
!! TTTTCCAAACTAAAATACGA+CGG + chr4_3:58305247-58305266 Msa0651030:five_prime_UTR 25.0%
!! TGTTTTACTCTTGAATACAA+AGG + chr4_3:58305457-58305476 Msa0651030:intron 25.0%
! TACTTAATATGACAAACAGA+TGG - chr4_3:58305676-58305695 None:intergenic 25.0%
! ATTAGTGGTTTATATGTTGT+TGG + chr4_3:58305845-58305864 Msa0651030:intron 25.0%
!! TTCTCAACCATTTCTTTTAT+AGG - chr4_3:58306229-58306248 None:intergenic 25.0%
! GTTTAGTTAGTTAGATACAA+TGG + chr4_3:58306628-58306647 Msa0651030:three_prime_UTR 25.0%
! AACAACAAAATAATCCAAGA+GGG - chr4_3:58306793-58306812 None:intergenic 25.0%
! ATAAAGTGTTTGCGTGAAAA+AGG - chr4_3:58305433-58305452 None:intergenic 30.0%
! AAAAGCTAACCTACCATTTT+TGG - chr4_3:58305568-58305587 None:intergenic 30.0%
!! ATCTTGGAGTTCTCTAAAAT+TGG - chr4_3:58305595-58305614 None:intergenic 30.0%
TATTAAGTAGTCTCTACTAC+TGG + chr4_3:58305687-58305706 Msa0651030:intron 30.0%
!! ACATATGCTTTTGTTATCGT+TGG + chr4_3:58305744-58305763 Msa0651030:intron 30.0%
!! CATATGCTTTTGTTATCGTT+GGG + chr4_3:58305745-58305764 Msa0651030:intron 30.0%
TGCAAATATCAGCTAATACA+AGG - chr4_3:58305945-58305964 None:intergenic 30.0%
ATTGAAGACATAAACCATTG+AGG - chr4_3:58305971-58305990 None:intergenic 30.0%
CAATGGTTTATGTCTTCAAT+AGG + chr4_3:58305971-58305990 Msa0651030:CDS 30.0%
ACAGAAAGATAACCATGATT+TGG - chr4_3:58305997-58306016 None:intergenic 30.0%
!! GTGTAAATTAATTTGCATGC+AGG - chr4_3:58306106-58306125 None:intergenic 30.0%
GCATGCAAATTAATTTACAC+CGG + chr4_3:58306106-58306125 Msa0651030:intron 30.0%
! CATTTTTCATTAAGGCTGAA+CGG + chr4_3:58306152-58306171 Msa0651030:intron 30.0%
!! CAATAAGCTCTTTGAAACTA+TGG - chr4_3:58306183-58306202 None:intergenic 30.0%
AAAGAGCTTATTGATGAGTA+TGG + chr4_3:58306190-58306209 Msa0651030:CDS 30.0%
AAAGGAAATTCAAATTCTGG+AGG - chr4_3:58306307-58306326 None:intergenic 30.0%
CTCAAAGGAAATTCAAATTC+TGG - chr4_3:58306310-58306329 None:intergenic 30.0%
TCAAATGTAAAATCCAGGTT+AGG - chr4_3:58306406-58306425 None:intergenic 30.0%
CAATGTCAAATGTAAAATCC+AGG - chr4_3:58306411-58306430 None:intergenic 30.0%
! CTGGATTTTACATTTGACAT+TGG + chr4_3:58306409-58306428 Msa0651030:intron 30.0%
! TGAAAATTTGCTTGTGCTTA+GGG + chr4_3:58306433-58306452 Msa0651030:intron 30.0%
ACAACAAAATAATCCAAGAG+GGG - chr4_3:58306792-58306811 None:intergenic 30.0%
CAACAACAAAATAATCCAAG+AGG - chr4_3:58306794-58306813 None:intergenic 30.0%
GGTATCACTATAACGTATAA+AGG - chr4_3:58306824-58306843 None:intergenic 30.0%
TCAAAAGGTTAAATTCCAGT+AGG - chr4_3:58307101-58307120 None:intergenic 30.0%
! TACTGGAATTTAACCTTTTG+AGG + chr4_3:58307100-58307119 Msa0651030:three_prime_UTR 30.0%
! ACTGGAATTTAACCTTTTGA+GGG + chr4_3:58307101-58307120 Msa0651030:three_prime_UTR 30.0%
AAAGTGAAATTTCCCTCAAA+AGG - chr4_3:58307116-58307135 None:intergenic 30.0%
! ATAAAGTGTTTGCGTGAAAA+AGG - chr4_3:58305433-58305452 None:intergenic 30.0%
! AAAAGCTAACCTACCATTTT+TGG - chr4_3:58305568-58305587 None:intergenic 30.0%
!! ATCTTGGAGTTCTCTAAAAT+TGG - chr4_3:58305595-58305614 None:intergenic 30.0%
TATTAAGTAGTCTCTACTAC+TGG + chr4_3:58305687-58305706 Msa0651030:intron 30.0%
!! ACATATGCTTTTGTTATCGT+TGG + chr4_3:58305744-58305763 Msa0651030:intron 30.0%
!! CATATGCTTTTGTTATCGTT+GGG + chr4_3:58305745-58305764 Msa0651030:intron 30.0%
TGCAAATATCAGCTAATACA+AGG - chr4_3:58305945-58305964 None:intergenic 30.0%
ATTGAAGACATAAACCATTG+AGG - chr4_3:58305971-58305990 None:intergenic 30.0%
CAATGGTTTATGTCTTCAAT+AGG + chr4_3:58305971-58305990 Msa0651030:CDS 30.0%
ACAGAAAGATAACCATGATT+TGG - chr4_3:58305997-58306016 None:intergenic 30.0%
!! GTGTAAATTAATTTGCATGC+AGG - chr4_3:58306106-58306125 None:intergenic 30.0%
GCATGCAAATTAATTTACAC+CGG + chr4_3:58306106-58306125 Msa0651030:intron 30.0%
! CATTTTTCATTAAGGCTGAA+CGG + chr4_3:58306152-58306171 Msa0651030:intron 30.0%
!! CAATAAGCTCTTTGAAACTA+TGG - chr4_3:58306183-58306202 None:intergenic 30.0%
AAAGAGCTTATTGATGAGTA+TGG + chr4_3:58306190-58306209 Msa0651030:CDS 30.0%
AAAGGAAATTCAAATTCTGG+AGG - chr4_3:58306307-58306326 None:intergenic 30.0%
CTCAAAGGAAATTCAAATTC+TGG - chr4_3:58306310-58306329 None:intergenic 30.0%
TCAAATGTAAAATCCAGGTT+AGG - chr4_3:58306406-58306425 None:intergenic 30.0%
CAATGTCAAATGTAAAATCC+AGG - chr4_3:58306411-58306430 None:intergenic 30.0%
! CTGGATTTTACATTTGACAT+TGG + chr4_3:58306409-58306428 Msa0651030:intron 30.0%
! TGAAAATTTGCTTGTGCTTA+GGG + chr4_3:58306433-58306452 Msa0651030:intron 30.0%
ACAACAAAATAATCCAAGAG+GGG - chr4_3:58306792-58306811 None:intergenic 30.0%
CAACAACAAAATAATCCAAG+AGG - chr4_3:58306794-58306813 None:intergenic 30.0%
GGTATCACTATAACGTATAA+AGG - chr4_3:58306824-58306843 None:intergenic 30.0%
TCAAAAGGTTAAATTCCAGT+AGG - chr4_3:58307101-58307120 None:intergenic 30.0%
! TACTGGAATTTAACCTTTTG+AGG + chr4_3:58307100-58307119 Msa0651030:three_prime_UTR 30.0%
! ACTGGAATTTAACCTTTTGA+GGG + chr4_3:58307101-58307120 Msa0651030:three_prime_UTR 30.0%
AAAGTGAAATTTCCCTCAAA+AGG - chr4_3:58307116-58307135 None:intergenic 30.0%
AAGCTCAGCTATGTGTATAA+CGG + chr4_3:58305301-58305320 Msa0651030:exon 35.0%
ACAGAGACGAATTTCATTCT+CGG + chr4_3:58305372-58305391 Msa0651030:CDS 35.0%
TGACCTGAATAAATCGAAGT+GGG - chr4_3:58305647-58305666 None:intergenic 35.0%
ATGACCTGAATAAATCGAAG+TGG - chr4_3:58305648-58305667 None:intergenic 35.0%
CTTCTTGAAAACTCAGTATC+CGG - chr4_3:58305771-58305790 None:intergenic 35.0%
!!! CTGTTTGTTAGTTTTGTCCT+TGG + chr4_3:58305812-58305831 Msa0651030:intron 35.0%
AAAGAGGCTCATCTATACAA+CGG + chr4_3:58305913-58305932 Msa0651030:CDS 35.0%
AGTAACCATGTGTATACCTT+TGG - chr4_3:58306069-58306088 None:intergenic 35.0%
TAGTAGCGTCAAAATTCATC+CGG - chr4_3:58306128-58306147 None:intergenic 35.0%
TCGACAAATATCGAACTCAA+AGG - chr4_3:58306325-58306344 None:intergenic 35.0%
TGTTAATTAGTTACCACCGA+AGG - chr4_3:58306358-58306377 None:intergenic 35.0%
! CTGAAAATTTGCTTGTGCTT+AGG + chr4_3:58306432-58306451 Msa0651030:intron 35.0%
! GAAAATTTGCTTGTGCTTAG+GGG + chr4_3:58306434-58306453 Msa0651030:intron 35.0%
TGATGTAACAAACAAAGCAG+AGG - chr4_3:58306479-58306498 None:intergenic 35.0%
CACATTCTATGAGAAACATC+TGG + chr4_3:58306510-58306529 Msa0651030:CDS 35.0%
ACTGGTTGATTAAATTCGTG+AGG - chr4_3:58306701-58306720 None:intergenic 35.0%
! TTTTTCACATTTTCCCCTCT+TGG + chr4_3:58306776-58306795 Msa0651030:three_prime_UTR 35.0%
TCAGATTGTCACATCTGATT+TGG + chr4_3:58307005-58307024 Msa0651030:three_prime_UTR 35.0%
CAGATTGTCACATCTGATTT+GGG + chr4_3:58307006-58307025 Msa0651030:three_prime_UTR 35.0%
! CTTGCTATGCAGAACTTTAT+AGG - chr4_3:58307147-58307166 None:intergenic 35.0%
CTATAAAGTTCTGCATAGCA+AGG + chr4_3:58307145-58307164 Msa0651030:three_prime_UTR 35.0%
AAGCTCAGCTATGTGTATAA+CGG + chr4_3:58305301-58305320 Msa0651030:exon 35.0%
ACAGAGACGAATTTCATTCT+CGG + chr4_3:58305372-58305391 Msa0651030:CDS 35.0%
TGACCTGAATAAATCGAAGT+GGG - chr4_3:58305647-58305666 None:intergenic 35.0%
ATGACCTGAATAAATCGAAG+TGG - chr4_3:58305648-58305667 None:intergenic 35.0%
CTTCTTGAAAACTCAGTATC+CGG - chr4_3:58305771-58305790 None:intergenic 35.0%
!!! CTGTTTGTTAGTTTTGTCCT+TGG + chr4_3:58305812-58305831 Msa0651030:intron 35.0%
AAAGAGGCTCATCTATACAA+CGG + chr4_3:58305913-58305932 Msa0651030:CDS 35.0%
AGTAACCATGTGTATACCTT+TGG - chr4_3:58306069-58306088 None:intergenic 35.0%
TAGTAGCGTCAAAATTCATC+CGG - chr4_3:58306128-58306147 None:intergenic 35.0%
TCGACAAATATCGAACTCAA+AGG - chr4_3:58306325-58306344 None:intergenic 35.0%
TGTTAATTAGTTACCACCGA+AGG - chr4_3:58306358-58306377 None:intergenic 35.0%
! CTGAAAATTTGCTTGTGCTT+AGG + chr4_3:58306432-58306451 Msa0651030:intron 35.0%
! GAAAATTTGCTTGTGCTTAG+GGG + chr4_3:58306434-58306453 Msa0651030:intron 35.0%
TGATGTAACAAACAAAGCAG+AGG - chr4_3:58306479-58306498 None:intergenic 35.0%
CACATTCTATGAGAAACATC+TGG + chr4_3:58306510-58306529 Msa0651030:CDS 35.0%
ACTGGTTGATTAAATTCGTG+AGG - chr4_3:58306701-58306720 None:intergenic 35.0%
! TTTTTCACATTTTCCCCTCT+TGG + chr4_3:58306776-58306795 Msa0651030:three_prime_UTR 35.0%
TCAGATTGTCACATCTGATT+TGG + chr4_3:58307005-58307024 Msa0651030:three_prime_UTR 35.0%
CAGATTGTCACATCTGATTT+GGG + chr4_3:58307006-58307025 Msa0651030:three_prime_UTR 35.0%
! CTTGCTATGCAGAACTTTAT+AGG - chr4_3:58307147-58307166 None:intergenic 35.0%
CTATAAAGTTCTGCATAGCA+AGG + chr4_3:58307145-58307164 Msa0651030:three_prime_UTR 35.0%
!!! CTGACCGTCGTATTTTAGTT+TGG - chr4_3:58305254-58305273 None:intergenic 40.0%
AACTAAAATACGACGGTCAG+TGG + chr4_3:58305254-58305273 Msa0651030:five_prime_UTR 40.0%
ACTAAAATACGACGGTCAGT+GGG + chr4_3:58305255-58305274 Msa0651030:five_prime_UTR 40.0%
TGTGTATAACGGTGTTCATG+TGG + chr4_3:58305312-58305331 Msa0651030:CDS 40.0%
!!! AAGAGGAGGAAAGGGTATTT+TGG - chr4_3:58305347-58305366 None:intergenic 40.0%
TGTTGAGTAAGAGGAGGAAA+GGG - chr4_3:58305355-58305374 None:intergenic 40.0%
ATTCGTCTCTGTTGAGTAAG+AGG - chr4_3:58305364-58305383 None:intergenic 40.0%
!! TGGTTGGCTTCTTCCAAAAA+TGG + chr4_3:58305552-58305571 Msa0651030:CDS 40.0%
TGGCTTCTTCCAAAAATGGT+AGG + chr4_3:58305556-58305575 Msa0651030:CDS 40.0%
! TTTTGGGCTGTGGAATATCT+TGG - chr4_3:58305611-58305630 None:intergenic 40.0%
TCTCCCACTTCGATTTATTC+AGG + chr4_3:58305641-58305660 Msa0651030:CDS 40.0%
CACTAATGAATGCACATCCA+AGG - chr4_3:58305832-58305851 None:intergenic 40.0%
CTTGGATGTGCATTCATTAG+TGG + chr4_3:58305830-58305849 Msa0651030:intron 40.0%
TGATATTTGCACCTCCTCAA+TGG + chr4_3:58305954-58305973 Msa0651030:CDS 40.0%
GAAGACATAAACCATTGAGG+AGG - chr4_3:58305968-58305987 None:intergenic 40.0%
GTCTTCAATAGGCCAAATCA+TGG + chr4_3:58305982-58306001 Msa0651030:CDS 40.0%
TAGTCAAGACGTGAATTCCA+GGG - chr4_3:58306023-58306042 None:intergenic 40.0%
TTAGTCAAGACGTGAATTCC+AGG - chr4_3:58306024-58306043 None:intergenic 40.0%
!! ATGAAAAGTGCTTGCTACCA+GGG + chr4_3:58306275-58306294 Msa0651030:CDS 40.0%
TGTCGACACACAATTTCCTT+CGG + chr4_3:58306339-58306358 Msa0651030:CDS 40.0%
GGCTTAAGCATGCAAAAAAG+TGG - chr4_3:58306385-58306404 None:intergenic 40.0%
AACATCTGGATCAGAAGCAA+TGG + chr4_3:58306524-58306543 Msa0651030:CDS 40.0%
GAAGCAATGGAAAGAGAACA+TGG + chr4_3:58306537-58306556 Msa0651030:CDS 40.0%
TTACCCTGTTTAGTGAGGAT+TGG + chr4_3:58306727-58306746 Msa0651030:three_prime_UTR 40.0%
GATCCAATCCTCACTAAACA+GGG - chr4_3:58306733-58306752 None:intergenic 40.0%
TGATCCAATCCTCACTAAAC+AGG - chr4_3:58306734-58306753 None:intergenic 40.0%
TTAGTGAGGATTGGATCAGT+TGG + chr4_3:58306736-58306755 Msa0651030:three_prime_UTR 40.0%
CTTAGTCGTGTAGAACATTG+CGG + chr4_3:58307075-58307094 Msa0651030:three_prime_UTR 40.0%
!!! CTGACCGTCGTATTTTAGTT+TGG - chr4_3:58305254-58305273 None:intergenic 40.0%
AACTAAAATACGACGGTCAG+TGG + chr4_3:58305254-58305273 Msa0651030:five_prime_UTR 40.0%
ACTAAAATACGACGGTCAGT+GGG + chr4_3:58305255-58305274 Msa0651030:five_prime_UTR 40.0%
TGTGTATAACGGTGTTCATG+TGG + chr4_3:58305312-58305331 Msa0651030:CDS 40.0%
!!! AAGAGGAGGAAAGGGTATTT+TGG - chr4_3:58305347-58305366 None:intergenic 40.0%
TGTTGAGTAAGAGGAGGAAA+GGG - chr4_3:58305355-58305374 None:intergenic 40.0%
ATTCGTCTCTGTTGAGTAAG+AGG - chr4_3:58305364-58305383 None:intergenic 40.0%
!! TGGTTGGCTTCTTCCAAAAA+TGG + chr4_3:58305552-58305571 Msa0651030:CDS 40.0%
TGGCTTCTTCCAAAAATGGT+AGG + chr4_3:58305556-58305575 Msa0651030:CDS 40.0%
! TTTTGGGCTGTGGAATATCT+TGG - chr4_3:58305611-58305630 None:intergenic 40.0%
TCTCCCACTTCGATTTATTC+AGG + chr4_3:58305641-58305660 Msa0651030:CDS 40.0%
CACTAATGAATGCACATCCA+AGG - chr4_3:58305832-58305851 None:intergenic 40.0%
CTTGGATGTGCATTCATTAG+TGG + chr4_3:58305830-58305849 Msa0651030:intron 40.0%
TGATATTTGCACCTCCTCAA+TGG + chr4_3:58305954-58305973 Msa0651030:CDS 40.0%
GAAGACATAAACCATTGAGG+AGG - chr4_3:58305968-58305987 None:intergenic 40.0%
GTCTTCAATAGGCCAAATCA+TGG + chr4_3:58305982-58306001 Msa0651030:CDS 40.0%
TAGTCAAGACGTGAATTCCA+GGG - chr4_3:58306023-58306042 None:intergenic 40.0%
TTAGTCAAGACGTGAATTCC+AGG - chr4_3:58306024-58306043 None:intergenic 40.0%
!! ATGAAAAGTGCTTGCTACCA+GGG + chr4_3:58306275-58306294 Msa0651030:CDS 40.0%
TGTCGACACACAATTTCCTT+CGG + chr4_3:58306339-58306358 Msa0651030:CDS 40.0%
GGCTTAAGCATGCAAAAAAG+TGG - chr4_3:58306385-58306404 None:intergenic 40.0%
AACATCTGGATCAGAAGCAA+TGG + chr4_3:58306524-58306543 Msa0651030:CDS 40.0%
GAAGCAATGGAAAGAGAACA+TGG + chr4_3:58306537-58306556 Msa0651030:CDS 40.0%
TTACCCTGTTTAGTGAGGAT+TGG + chr4_3:58306727-58306746 Msa0651030:three_prime_UTR 40.0%
GATCCAATCCTCACTAAACA+GGG - chr4_3:58306733-58306752 None:intergenic 40.0%
TGATCCAATCCTCACTAAAC+AGG - chr4_3:58306734-58306753 None:intergenic 40.0%
TTAGTGAGGATTGGATCAGT+TGG + chr4_3:58306736-58306755 Msa0651030:three_prime_UTR 40.0%
CTTAGTCGTGTAGAACATTG+CGG + chr4_3:58307075-58307094 Msa0651030:three_prime_UTR 40.0%
CTAAAATACGACGGTCAGTG+GGG + chr4_3:58305256-58305275 Msa0651030:five_prime_UTR 45.0%
CTGTTGAGTAAGAGGAGGAA+AGG - chr4_3:58305356-58305375 None:intergenic 45.0%
ACAAAGGCCTACAGAACCAT+TGG + chr4_3:58305473-58305492 Msa0651030:intron 45.0%
TACAGAACCATTGGCATGGT+GGG + chr4_3:58305482-58305501 Msa0651030:CDS 45.0%
ATTCCACAGCCCAAAACTAG+AGG + chr4_3:58305615-58305634 Msa0651030:CDS 45.0%
!! TGCTTTTGTTATCGTTGGGC+CGG + chr4_3:58305749-58305768 Msa0651030:intron 45.0%
GGTTATCTTTCTGTTACCCC+TGG + chr4_3:58306003-58306022 Msa0651030:CDS 45.0%
AGTCAAGACGTGAATTCCAG+GGG - chr4_3:58306022-58306041 None:intergenic 45.0%
CGTCTTGACTAATGCACCAT+TGG + chr4_3:58306032-58306051 Msa0651030:CDS 45.0%
CATGTGTATACCTTTGGCCA+AGG - chr4_3:58306063-58306082 None:intergenic 45.0%
! CTTGGCCAAAGGTATACACA+TGG + chr4_3:58306061-58306080 Msa0651030:intron 45.0%
!! GATGAAAAGTGCTTGCTACC+AGG + chr4_3:58306274-58306293 Msa0651030:CDS 45.0%
TTGCATGCTTAAGCCTAACC+TGG + chr4_3:58306390-58306409 Msa0651030:intron 45.0%
GATCAGTGAGACACAGTGAA+TGG + chr4_3:58306570-58306589 Msa0651030:exon 45.0%
! ATTGACAAGGTGCTAGTGAG+TGG - chr4_3:58306659-58306678 None:intergenic 45.0%
TAAACAGGGTAAGACTGGAC+TGG - chr4_3:58306719-58306738 None:intergenic 45.0%
CTCACTAAACAGGGTAAGAC+TGG - chr4_3:58306724-58306743 None:intergenic 45.0%
CAGTCTTACCCTGTTTAGTG+AGG + chr4_3:58306722-58306741 Msa0651030:three_prime_UTR 45.0%
!! GCATGTGCTCATTCTGAAAC+CGG - chr4_3:58306858-58306877 None:intergenic 45.0%
AATGAGCACATGCTCACCTT+GGG + chr4_3:58306865-58306884 Msa0651030:three_prime_UTR 45.0%
ATAAAAGCAAGCTAGCCCCA+AGG - chr4_3:58306884-58306903 None:intergenic 45.0%
CTAAAATACGACGGTCAGTG+GGG + chr4_3:58305256-58305275 Msa0651030:five_prime_UTR 45.0%
CTGTTGAGTAAGAGGAGGAA+AGG - chr4_3:58305356-58305375 None:intergenic 45.0%
ACAAAGGCCTACAGAACCAT+TGG + chr4_3:58305473-58305492 Msa0651030:intron 45.0%
TACAGAACCATTGGCATGGT+GGG + chr4_3:58305482-58305501 Msa0651030:CDS 45.0%
ATTCCACAGCCCAAAACTAG+AGG + chr4_3:58305615-58305634 Msa0651030:CDS 45.0%
!! TGCTTTTGTTATCGTTGGGC+CGG + chr4_3:58305749-58305768 Msa0651030:intron 45.0%
GGTTATCTTTCTGTTACCCC+TGG + chr4_3:58306003-58306022 Msa0651030:CDS 45.0%
AGTCAAGACGTGAATTCCAG+GGG - chr4_3:58306022-58306041 None:intergenic 45.0%
CGTCTTGACTAATGCACCAT+TGG + chr4_3:58306032-58306051 Msa0651030:CDS 45.0%
CATGTGTATACCTTTGGCCA+AGG - chr4_3:58306063-58306082 None:intergenic 45.0%
! CTTGGCCAAAGGTATACACA+TGG + chr4_3:58306061-58306080 Msa0651030:intron 45.0%
!! GATGAAAAGTGCTTGCTACC+AGG + chr4_3:58306274-58306293 Msa0651030:CDS 45.0%
TTGCATGCTTAAGCCTAACC+TGG + chr4_3:58306390-58306409 Msa0651030:intron 45.0%
GATCAGTGAGACACAGTGAA+TGG + chr4_3:58306570-58306589 Msa0651030:exon 45.0%
! ATTGACAAGGTGCTAGTGAG+TGG - chr4_3:58306659-58306678 None:intergenic 45.0%
TAAACAGGGTAAGACTGGAC+TGG - chr4_3:58306719-58306738 None:intergenic 45.0%
CTCACTAAACAGGGTAAGAC+TGG - chr4_3:58306724-58306743 None:intergenic 45.0%
CAGTCTTACCCTGTTTAGTG+AGG + chr4_3:58306722-58306741 Msa0651030:three_prime_UTR 45.0%
!! GCATGTGCTCATTCTGAAAC+CGG - chr4_3:58306858-58306877 None:intergenic 45.0%
AATGAGCACATGCTCACCTT+GGG + chr4_3:58306865-58306884 Msa0651030:three_prime_UTR 45.0%
ATAAAAGCAAGCTAGCCCCA+AGG - chr4_3:58306884-58306903 None:intergenic 45.0%
CGTCTCTGTTGAGTAAGAGG+AGG - chr4_3:58305361-58305380 None:intergenic 50.0%
! CACCATGCCAATGGTTCTGT+AGG - chr4_3:58305483-58305502 None:intergenic 50.0%
CTACAGAACCATTGGCATGG+TGG + chr4_3:58305481-58305500 Msa0651030:CDS 50.0%
TGGGACGGCGAAACAATCTT+AGG + chr4_3:58305501-58305520 Msa0651030:CDS 50.0%
GACGGCGAAACAATCTTAGG+CGG + chr4_3:58305504-58305523 Msa0651030:CDS 50.0%
GGCGGTAGAGATATACTCTG+CGG + chr4_3:58305522-58305541 Msa0651030:CDS 50.0%
GCGGTAGAGATATACTCTGC+GGG + chr4_3:58305523-58305542 Msa0651030:CDS 50.0%
CGGTAGAGATATACTCTGCG+GGG + chr4_3:58305524-58305543 Msa0651030:CDS 50.0%
GGTAGAGATATACTCTGCGG+GGG + chr4_3:58305525-58305544 Msa0651030:CDS 50.0%
!!! GGGAGATCGCCTCTAGTTTT+GGG - chr4_3:58305627-58305646 None:intergenic 50.0%
!! TGGGAGATCGCCTCTAGTTT+TGG - chr4_3:58305628-58305647 None:intergenic 50.0%
ACAGAGTGATAAGAGTCCCG+AGG + chr4_3:58305870-58305889 Msa0651030:intron 50.0%
TAAGAGTCCCGAGGAGTTTG+CGG + chr4_3:58305879-58305898 Msa0651030:CDS 50.0%
ATGCACCATTGGATGCTCCT+TGG + chr4_3:58306043-58306062 Msa0651030:CDS 50.0%
!! TTTGGCCAAGGAGCATCCAA+TGG - chr4_3:58306051-58306070 None:intergenic 50.0%
ATTGGATGCTCCTTGGCCAA+AGG + chr4_3:58306050-58306069 Msa0651030:CDS 50.0%
! AATTCTGGAGGACGAATCCC+TGG - chr4_3:58306295-58306314 None:intergenic 50.0%
CGACACACAATTTCCTTCGG+TGG + chr4_3:58306342-58306361 Msa0651030:CDS 50.0%
! GAGGTGCTCCTAGTACCATA+CGG - chr4_3:58306460-58306479 None:intergenic 50.0%
!! CTCATTCTGAAACCGGTGCA+TGG - chr4_3:58306851-58306870 None:intergenic 50.0%
GAATGAGCACATGCTCACCT+TGG + chr4_3:58306864-58306883 Msa0651030:three_prime_UTR 50.0%
ATGAGCACATGCTCACCTTG+GGG + chr4_3:58306866-58306885 Msa0651030:three_prime_UTR 50.0%
TGTAGAACATTGCGGCCTAC+TGG + chr4_3:58307083-58307102 Msa0651030:three_prime_UTR 50.0%
CGTCTCTGTTGAGTAAGAGG+AGG - chr4_3:58305361-58305380 None:intergenic 50.0%
! CACCATGCCAATGGTTCTGT+AGG - chr4_3:58305483-58305502 None:intergenic 50.0%
CTACAGAACCATTGGCATGG+TGG + chr4_3:58305481-58305500 Msa0651030:CDS 50.0%
TGGGACGGCGAAACAATCTT+AGG + chr4_3:58305501-58305520 Msa0651030:CDS 50.0%
GACGGCGAAACAATCTTAGG+CGG + chr4_3:58305504-58305523 Msa0651030:CDS 50.0%
GGCGGTAGAGATATACTCTG+CGG + chr4_3:58305522-58305541 Msa0651030:CDS 50.0%
GCGGTAGAGATATACTCTGC+GGG + chr4_3:58305523-58305542 Msa0651030:CDS 50.0%
CGGTAGAGATATACTCTGCG+GGG + chr4_3:58305524-58305543 Msa0651030:CDS 50.0%
GGTAGAGATATACTCTGCGG+GGG + chr4_3:58305525-58305544 Msa0651030:CDS 50.0%
!!! GGGAGATCGCCTCTAGTTTT+GGG - chr4_3:58305627-58305646 None:intergenic 50.0%
!! TGGGAGATCGCCTCTAGTTT+TGG - chr4_3:58305628-58305647 None:intergenic 50.0%
ACAGAGTGATAAGAGTCCCG+AGG + chr4_3:58305870-58305889 Msa0651030:intron 50.0%
TAAGAGTCCCGAGGAGTTTG+CGG + chr4_3:58305879-58305898 Msa0651030:CDS 50.0%
ATGCACCATTGGATGCTCCT+TGG + chr4_3:58306043-58306062 Msa0651030:CDS 50.0%
!! TTTGGCCAAGGAGCATCCAA+TGG - chr4_3:58306051-58306070 None:intergenic 50.0%
ATTGGATGCTCCTTGGCCAA+AGG + chr4_3:58306050-58306069 Msa0651030:CDS 50.0%
! AATTCTGGAGGACGAATCCC+TGG - chr4_3:58306295-58306314 None:intergenic 50.0%
CGACACACAATTTCCTTCGG+TGG + chr4_3:58306342-58306361 Msa0651030:CDS 50.0%
! GAGGTGCTCCTAGTACCATA+CGG - chr4_3:58306460-58306479 None:intergenic 50.0%
!! CTCATTCTGAAACCGGTGCA+TGG - chr4_3:58306851-58306870 None:intergenic 50.0%
GAATGAGCACATGCTCACCT+TGG + chr4_3:58306864-58306883 Msa0651030:three_prime_UTR 50.0%
ATGAGCACATGCTCACCTTG+GGG + chr4_3:58306866-58306885 Msa0651030:three_prime_UTR 50.0%
TGTAGAACATTGCGGCCTAC+TGG + chr4_3:58307083-58307102 Msa0651030:three_prime_UTR 50.0%
GGCCTACAGAACCATTGGCA+TGG + chr4_3:58305478-58305497 Msa0651030:intron 55.0%
! GAACCATTGGCATGGTGGGA+CGG + chr4_3:58305486-58305505 Msa0651030:CDS 55.0%
! ATATACTCTGCGGGGGTACG+TGG + chr4_3:58305532-58305551 Msa0651030:CDS 55.0%
!!! TCGCCTCTAGTTTTGGGCTG+TGG - chr4_3:58305621-58305640 None:intergenic 55.0%
ACTTCCTCCGCAAACTCCTC+GGG - chr4_3:58305889-58305908 None:intergenic 55.0%
CACTTCCTCCGCAAACTCCT+CGG - chr4_3:58305890-58305909 None:intergenic 55.0%
!! TGCGGAGGAAGTGCTCAAAG+AGG + chr4_3:58305897-58305916 Msa0651030:CDS 55.0%
CTTAGGGGCCGTATGGTACT+AGG + chr4_3:58306449-58306468 Msa0651030:intron 55.0%
GTGATACCTGCACCATGCAC+CGG + chr4_3:58306836-58306855 Msa0651030:three_prime_UTR 55.0%
GGCCTACAGAACCATTGGCA+TGG + chr4_3:58305478-58305497 Msa0651030:intron 55.0%
! GAACCATTGGCATGGTGGGA+CGG + chr4_3:58305486-58305505 Msa0651030:CDS 55.0%
! ATATACTCTGCGGGGGTACG+TGG + chr4_3:58305532-58305551 Msa0651030:CDS 55.0%
!!! TCGCCTCTAGTTTTGGGCTG+TGG - chr4_3:58305621-58305640 None:intergenic 55.0%
ACTTCCTCCGCAAACTCCTC+GGG - chr4_3:58305889-58305908 None:intergenic 55.0%
CACTTCCTCCGCAAACTCCT+CGG - chr4_3:58305890-58305909 None:intergenic 55.0%
!! TGCGGAGGAAGTGCTCAAAG+AGG + chr4_3:58305897-58305916 Msa0651030:CDS 55.0%
CTTAGGGGCCGTATGGTACT+AGG + chr4_3:58306449-58306468 Msa0651030:intron 55.0%
GTGATACCTGCACCATGCAC+CGG + chr4_3:58306836-58306855 Msa0651030:three_prime_UTR 55.0%
GCTTGTGCTTAGGGGCCGTA+TGG + chr4_3:58306442-58306461 Msa0651030:intron 60.0%
CTGAAACCGGTGCATGGTGC+AGG - chr4_3:58306845-58306864 None:intergenic 60.0%
GCTTGTGCTTAGGGGCCGTA+TGG + chr4_3:58306442-58306461 Msa0651030:intron 60.0%
CTGAAACCGGTGCATGGTGC+AGG - chr4_3:58306845-58306864 None:intergenic 60.0%
TCGCCGTCCCACCATGCCAA+TGG - chr4_3:58305492-58305511 None:intergenic 65.0%
! ACTCTGCGGGGGTACGTGGT+TGG + chr4_3:58305536-58305555 Msa0651030:CDS 65.0%
GAGTCCCGAGGAGTTTGCGG+AGG + chr4_3:58305882-58305901 Msa0651030:CDS 65.0%
TCGCCGTCCCACCATGCCAA+TGG - chr4_3:58305492-58305511 None:intergenic 65.0%
! ACTCTGCGGGGGTACGTGGT+TGG + chr4_3:58305536-58305555 Msa0651030:CDS 65.0%
GAGTCCCGAGGAGTTTGCGG+AGG + chr4_3:58305882-58305901 Msa0651030:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 58305233 58307175 58305233 ID=Msa0651030;Name=Msa0651030
chr4_3 mRNA 58305233 58307175 58305233 ID=Msa0651030-mRNA-1;Parent=Msa0651030;Name=Msa0651030-mRNA-1;_AED=0.11;_eAED=0.11;_QI=78|1|1|1|1|1|5|587|265
chr4_3 exon 58305233 58305393 58305233 ID=Msa0651030-mRNA-1:exon:15422;Parent=Msa0651030-mRNA-1
chr4_3 exon 58305479 58305662 58305479 ID=Msa0651030-mRNA-1:exon:15423;Parent=Msa0651030-mRNA-1
chr4_3 exon 58305874 58306071 58305874 ID=Msa0651030-mRNA-1:exon:15424;Parent=Msa0651030-mRNA-1
chr4_3 exon 58306166 58306363 58306166 ID=Msa0651030-mRNA-1:exon:15425;Parent=Msa0651030-mRNA-1
chr4_3 exon 58306454 58307175 58306454 ID=Msa0651030-mRNA-1:exon:15426;Parent=Msa0651030-mRNA-1
chr4_3 five_prime_UTR 58305233 58305310 58305233 ID=Msa0651030-mRNA-1:five_prime_utr;Parent=Msa0651030-mRNA-1
chr4_3 CDS 58305311 58305393 58305311 ID=Msa0651030-mRNA-1:cds;Parent=Msa0651030-mRNA-1
chr4_3 CDS 58305479 58305662 58305479 ID=Msa0651030-mRNA-1:cds;Parent=Msa0651030-mRNA-1
chr4_3 CDS 58305874 58306071 58305874 ID=Msa0651030-mRNA-1:cds;Parent=Msa0651030-mRNA-1
chr4_3 CDS 58306166 58306363 58306166 ID=Msa0651030-mRNA-1:cds;Parent=Msa0651030-mRNA-1
chr4_3 CDS 58306454 58306588 58306454 ID=Msa0651030-mRNA-1:cds;Parent=Msa0651030-mRNA-1
chr4_3 three_prime_UTR 58306589 58307175 58306589 ID=Msa0651030-mRNA-1:three_prime_utr;Parent=Msa0651030-mRNA-1
Gene Sequence

>Msa0651030

ATGTGTATAACGGTGTTCATGTGGCAAGCTCATCCAAAATACCCTTTCCTCCTCTTACTCAACAGAGACGAATTTCATTCTCGGCCTACAGAACCATTGGCATGGTGGGACGGCGAAACAATCTTAGGCGGTAGAGATATACTCTGCGGGGGTACGTGGTTGGCTTCTTCCAAAAATGGTAGGTTAGCTTTTCTCACCAATTTTAGAGAACTCCAAGATATTCCACAGCCCAAAACTAGAGGCGATCTCCCACTTCGATTTATTCAGAGTGATAAGAGTCCCGAGGAGTTTGCGGAGGAAGTGCTCAAAGAGGCTCATCTATACAACGGTTTCAACCTTGTATTAGCTGATATTTGCACCTCCTCAATGGTTTATGTCTTCAATAGGCCAAATCATGGTTATCTTTCTGTTACCCCTGGAATTCACGTCTTGACTAATGCACCATTGGATGCTCCTTGGCCAAAGGCTGAACGGTTGCGCCATAGTTTCAAAGAGCTTATTGATGAGTATGGTGAACGTGAATTTCCTATAAAAGAAATGGTTGAGAAACTAATGACAAACACAGTTAAAGATGATGAAAAGTGCTTGCTACCAGGGATTCGTCCTCCAGAATTTGAATTTCCTTTGAGTTCGATATTTGTCGACACACAATTTCCTTCGGTGGGGCCGTATGGTACTAGGAGCACCTCTGCTTTGTTTGTTACATCAAACAAAAAAGTCACATTCTATGAGAAACATCTGGATCAGAAGCAATGGAAAGAGAACATGGTAACTTATCAGATCAGTGAGACACAGTGA
Protein sequence

>Msa0651030

MCITVFMWQAHPKYPFLLLLNRDEFHSRPTEPLAWWDGETILGGRDILCGGTWLASSKNGRLAFLTNFRELQDIPQPKTRGDLPLRFIQSDKSPEEFAEEVLKEAHLYNGFNLVLADICTSSMVYVFNRPNHGYLSVTPGIHVLTNAPLDAPWPKAERLRHSFKELIDEYGEREFPIKEMVEKLMTNTVKDDEKCLLPGIRPPEFEFPLSSIFVDTQFPSVGPYGTRSTSALFVTSNKKVTFYEKHLDQKQWKENMVTYQISETQ*