AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1400800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1400800 MtrunA17_Chr4g0043371 93.585 265 17 0 1 265 1 265 0.0 527
Msa1400800 MtrunA17_Chr3g0115621 50.628 239 112 4 29 263 6 242 1.02e-79 240
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1400800 AT4G38260.1 56.884 276 105 7 1 265 1 273 1.69e-106 310
Msa1400800 AT1G20740.2 33.094 278 148 15 1 261 1 257 7.24e-28 107
Msa1400800 AT1G20730.1 33.205 259 140 12 1 246 1 239 2.76e-27 106
Msa1400800 AT1G20680.2 28.571 273 172 11 1 261 1 262 8.64e-25 99.8
Msa1400800 AT1G20740.1 33.466 251 130 14 28 261 35 265 4.10e-24 98.2
Msa1400800 AT1G20680.1 28.049 246 154 11 28 261 36 270 3.23e-18 82.4

Find 104 sgRNAs with CRISPR-Local

Find 300 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGCTATGCAGAACTTTAT+AGG 0.199781 tig0022477:+12334 None:intergenic
TGGGAGATCGCCTCTAGTTT+TGG 0.223738 tig0022477:+13865 None:intergenic
ATCTTGGAGTTCTCTAAAAT+TGG 0.229435 tig0022477:+13898 None:intergenic
TCAGATTGTCACATCTGATT+TGG 0.243610 tig0022477:-12488 Msa1400800:three_prime_UTR
TCTCCCACTTCGATTTATTC+AGG 0.281725 tig0022477:-13849 Msa1400800:intron
CTCAAAGGAAATTCAAATTC+TGG 0.291452 tig0022477:+13186 None:intergenic
AAAGAGCTTATTGATGAGTA+TGG 0.307520 tig0022477:-13303 Msa1400800:CDS
CAATAAGCTCTTTGAAACTA+TGG 0.309883 tig0022477:+13313 None:intergenic
CAGATTGTCACATCTGATTT+GGG 0.316989 tig0022477:-12487 Msa1400800:three_prime_UTR
AAGAGGAGGAAAGGGTATTT+CGG 0.323616 tig0022477:+14146 None:intergenic
TGATCCAATCCTCACTAAAC+AGG 0.340954 tig0022477:+12762 None:intergenic
CAATGGTTTATGTCTTCAAT+AGG 0.356326 tig0022477:-13522 Msa1400800:CDS
GGTATCACTATAACGTATAA+AGG 0.377921 tig0022477:+12672 None:intergenic
ACAGAAAGATAACCATGATT+TGG 0.383345 tig0022477:+13499 None:intergenic
TGAATTTCCTATAAAAGAAA+TGG 0.389311 tig0022477:-13274 Msa1400800:CDS
AATGAGCACATGCTCACCTT+GGG 0.414957 tig0022477:-12628 Msa1400800:three_prime_UTR
TTAGTCAAGACGTGAATTCC+AGG 0.415005 tig0022477:+13472 None:intergenic
AAAGTGAAATTTCCCTCAAA+AGG 0.416191 tig0022477:+12365 None:intergenic
GGTTATCTTTCTGTTACCCC+TGG 0.432020 tig0022477:-13490 Msa1400800:CDS
ATTCGTCTCTGTTGAGTAAG+AGG 0.443519 tig0022477:+14129 None:intergenic
TTACCCTGTTTAGTGAGGAT+TGG 0.451636 tig0022477:-12766 Msa1400800:three_prime_UTR
TGGGACGGCGAAACAATCTT+AGG 0.452901 tig0022477:-13989 Msa1400800:CDS
CAAGAGTCCCGAGGAGTTTG+CGG 0.456257 tig0022477:-13614 Msa1400800:CDS
CACATTCTATGAGAAACATC+TGG 0.464669 tig0022477:-12983 Msa1400800:CDS
ACAGAGACGAATTTCATTCT+CGG 0.465466 tig0022477:-14118 Msa1400800:intron
CACTTCCTCCGCAAACTCCT+CGG 0.469339 tig0022477:+13606 None:intergenic
TGATATTTGCACCTCCTCAA+TGG 0.469875 tig0022477:-13539 Msa1400800:CDS
CTTAGGGGCCGTATGGTACT+AGG 0.472770 tig0022477:-13044 Msa1400800:intron
CGTCTTGACTAATGCACCAT+TGG 0.481062 tig0022477:-13461 Msa1400800:CDS
CTGAAACCGGTGCATGGTGC+AGG 0.482539 tig0022477:+12651 None:intergenic
CTCACTAAACAGGGTAAGAC+TGG 0.484155 tig0022477:+12772 None:intergenic
GTCTTCAATAGGCCAAATCA+TGG 0.490436 tig0022477:-13511 Msa1400800:CDS
TGTCGACACACAATTTCCTT+CGG 0.494369 tig0022477:-13154 Msa1400800:CDS
GATGAAAAGTGCTTGCTACC+AGG 0.494938 tig0022477:-13219 Msa1400800:CDS
ACTTCCTCCGCAAACTCCTC+GGG 0.500852 tig0022477:+13607 None:intergenic
TGGTTACACTATTTATTACA+AGG 0.503107 tig0022477:-14267 None:intergenic
GAATGAGCACATGCTCACCT+TGG 0.510868 tig0022477:-12629 Msa1400800:three_prime_UTR
GCATGTGCTCATTCTGAAAC+CGG 0.521386 tig0022477:+12638 None:intergenic
TTAGTCGTGTAGAACATTGC+GGG 0.521483 tig0022477:-12417 Msa1400800:intron
TCGCCGTCCCACCATGCCAA+TGG 0.523136 tig0022477:+14001 None:intergenic
ACTAAAATACGACGGTCAGT+GGG 0.524749 tig0022477:-14235 Msa1400800:five_prime_UTR
GTTTAGTTAGTTAGATACAA+TGG 0.527879 tig0022477:-12865 Msa1400800:three_prime_UTR
CACCATGCCAATGGTTCTGT+AGG 0.531172 tig0022477:+14010 None:intergenic
AACTAAAATACGACGGTCAG+TGG 0.531242 tig0022477:-14236 Msa1400800:five_prime_UTR
ATGCACCATTGGATGCTCCT+TGG 0.531423 tig0022477:-13450 Msa1400800:CDS
CGACACACAATTTCCTTCGG+TGG 0.533528 tig0022477:-13151 Msa1400800:intron
AACATCTGGATCAGAAGCAA+TGG 0.535521 tig0022477:-12969 Msa1400800:CDS
GCTTGTGCTTAGGGGCCGTA+TGG 0.536592 tig0022477:-13051 Msa1400800:intron
CTGTTGAGTAAGAGGAGGAA+AGG 0.536600 tig0022477:+14137 None:intergenic
AAGCTCAGCTATGTGTATAA+CGG 0.547357 tig0022477:-14189 Msa1400800:exon
AATTCTGGAGGACGAATCCC+TGG 0.548820 tig0022477:+13201 None:intergenic
GCGGTAGAGATATACTCTGC+GGG 0.548843 tig0022477:-13967 Msa1400800:CDS
GATCAGTGAGACACAGTGAA+TGG 0.554589 tig0022477:-12923 Msa1400800:exon
ATGAAAAGTGCTTGCTACCA+GGG 0.555789 tig0022477:-13218 Msa1400800:CDS
ACAAAGGCCTACAGAACCAT+TGG 0.556864 tig0022477:-14017 Msa1400800:intron
TGTTGAGTAAGAGGAGGAAA+GGG 0.560808 tig0022477:+14138 None:intergenic
CAGTCTTACCCTGTTTAGTG+AGG 0.567192 tig0022477:-12771 Msa1400800:three_prime_UTR
TACAGAACCATTGGCATGGT+GGG 0.567524 tig0022477:-14008 Msa1400800:CDS
TTAGTGAGGATTGGATCAGT+TGG 0.573193 tig0022477:-12757 Msa1400800:three_prime_UTR
TGCAAATATCAGCTAATACA+AGG 0.587286 tig0022477:+13551 None:intergenic
GTGATACCTGCACCATGCAC+CGG 0.588039 tig0022477:-12657 Msa1400800:three_prime_UTR
GAACCATTGGCATGGTGGGA+CGG 0.589400 tig0022477:-14004 Msa1400800:CDS
CTCATTCTGAAACCGGTGCA+TGG 0.591335 tig0022477:+12645 None:intergenic
AACAACAAAATAATCCAAGA+GGG 0.596674 tig0022477:+12703 None:intergenic
ATTGGATGCTCCTTGGCCAA+AGG 0.597415 tig0022477:-13443 Msa1400800:intron
CTTAGTCGTGTAGAACATTG+CGG 0.599587 tig0022477:-12418 Msa1400800:three_prime_UTR
CATGTGTATACCTTTGGCCA+AGG 0.607377 tig0022477:+13433 None:intergenic
TAGTCAAGACGTGAATTCCA+GGG 0.609514 tig0022477:+13473 None:intergenic
TAAACAGGGTAAGACTGGAC+TGG 0.613878 tig0022477:+12777 None:intergenic
TGTTAATTAGTTACCACCGA+AGG 0.614939 tig0022477:+13138 None:intergenic
TCGACAAATATCGAACTCAA+AGG 0.618961 tig0022477:+13171 None:intergenic
TTTGGCCAAGGAGCATCCAA+TGG 0.623802 tig0022477:+13445 None:intergenic
ATTGACAAGGTGCTAGTGAG+TGG 0.628021 tig0022477:+12837 None:intergenic
ATTCCACAGCCCAAAACTAG+AGG 0.629616 tig0022477:-13875 Msa1400800:CDS
ATTGAAGACATAAACCATTG+AGG 0.630572 tig0022477:+13525 None:intergenic
CTATAAAGTTCTGCATAGCA+AGG 0.630966 tig0022477:-12333 Msa1400800:three_prime_UTR
GAAGCAATGGAAAGAGAACA+TGG 0.634459 tig0022477:-12956 Msa1400800:CDS
TTATAAATAAAAGTTCAGCA+TGG 0.635820 tig0022477:-12548 Msa1400800:three_prime_UTR
CAACAACAAAATAATCCAAG+AGG 0.636564 tig0022477:+12702 None:intergenic
ACTGGTTGATTAAATTCGTG+AGG 0.636764 tig0022477:+12795 None:intergenic
GAGTCCCGAGGAGTTTGCGG+AGG 0.637048 tig0022477:-13611 Msa1400800:CDS
AAAGGAAATTCAAATTCTGG+AGG 0.638483 tig0022477:+13189 None:intergenic
CGTCTCTGTTGAGTAAGAGG+AGG 0.638986 tig0022477:+14132 None:intergenic
TGACCTGAATAAATCGAAGT+GGG 0.641166 tig0022477:+13846 None:intergenic
GGCCTACAGAACCATTGGCA+TGG 0.641777 tig0022477:-14012 Msa1400800:CDS
ATGAGCACATGCTCACCTTG+GGG 0.649404 tig0022477:-12627 Msa1400800:three_prime_UTR
GATCCAATCCTCACTAAACA+GGG 0.653669 tig0022477:+12763 None:intergenic
CGGTAGAGATATACTCTGCG+GGG 0.659645 tig0022477:-13966 Msa1400800:CDS
ATGACCTGAATAAATCGAAG+TGG 0.662417 tig0022477:+13845 None:intergenic
GAGGTGCTCCTAGTACCATA+CGG 0.663675 tig0022477:+13036 None:intergenic
TGTGTATAACGGTGTTCATG+TGG 0.667575 tig0022477:-14178 Msa1400800:CDS
GGCGGTAGAGATATACTCTG+CGG 0.672664 tig0022477:-13968 Msa1400800:CDS
TGATGTAACAAACAAAGCAG+AGG 0.675989 tig0022477:+13017 None:intergenic
ATAAAAGCAAGCTAGCCCCA+AGG 0.676555 tig0022477:+12612 None:intergenic
TGCGGAGGAAGTGCTCAAAG+AGG 0.679372 tig0022477:-13596 Msa1400800:CDS
ACAGAGCGACAAGAGTCCCG+AGG 0.680141 tig0022477:-13623 Msa1400800:intron
GAAGACATAAACCATTGAGG+AGG 0.681667 tig0022477:+13528 None:intergenic
CTACAGAACCATTGGCATGG+TGG 0.682886 tig0022477:-14009 Msa1400800:CDS
CTAAAATACGACGGTCAGTG+GGG 0.692689 tig0022477:-14234 Msa1400800:five_prime_UTR
AGTCAAGACGTGAATTCCAG+GGG 0.696129 tig0022477:+13474 None:intergenic
ACAACAAAATAATCCAAGAG+GGG 0.699752 tig0022477:+12704 None:intergenic
AAAGAGGCTCATCTATACAA+CGG 0.707692 tig0022477:-13580 Msa1400800:CDS
GACGGCGAAACAATCTTAGG+CGG 0.730697 tig0022477:-13986 Msa1400800:CDS
GGTAGAGATATACTCTGCGG+GGG 0.739093 tig0022477:-13965 Msa1400800:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACTAAGTATATTTTTCATTA+AGG - tig0022477:13233-13252 Msa1400800:CDS 15.0%
!!! TGAACTTTTATTTATAAGAA+GGG + tig0022477:14031-14050 None:intergenic 15.0%
!!! ACTAAGTATATTTTTCATTA+AGG - tig0022477:13233-13252 Msa1400800:CDS 15.0%
!!! TGAACTTTTATTTATAAGAA+GGG + tig0022477:14031-14050 None:intergenic 15.0%
!! TGAATTTCCTATAAAAGAAA+TGG - tig0022477:13308-13327 Msa1400800:CDS 20.0%
!!! ACATTTTATTCATATTGACA+AGG + tig0022477:13761-13780 None:intergenic 20.0%
!!! CTGAACTTTTATTTATAAGA+AGG + tig0022477:14032-14051 None:intergenic 20.0%
!! TTATAAATAAAAGTTCAGCA+TGG - tig0022477:14034-14053 Msa1400800:intron 20.0%
!! TGAATTTCCTATAAAAGAAA+TGG - tig0022477:13308-13327 Msa1400800:CDS 20.0%
!!! ACATTTTATTCATATTGACA+AGG + tig0022477:13761-13780 None:intergenic 20.0%
!!! CTGAACTTTTATTTATAAGA+AGG + tig0022477:14032-14051 None:intergenic 20.0%
!! TTATAAATAAAAGTTCAGCA+TGG - tig0022477:14034-14053 Msa1400800:intron 20.0%
!! TTTTCCAAACTAAAATACGA+CGG - tig0022477:12339-12358 Msa1400800:three_prime_UTR 25.0%
!! TGTTTTACTCTTGAATACAA+AGG - tig0022477:12549-12568 Msa1400800:three_prime_UTR 25.0%
! TACTTAATATGACAAACAGA+TGG + tig0022477:12768-12787 None:intergenic 25.0%
!!! ACATATGCTTTTGTTATCTT+TGG - tig0022477:12833-12852 Msa1400800:three_prime_UTR 25.0%
!!! CATATGCTTTTGTTATCTTT+GGG - tig0022477:12834-12853 Msa1400800:three_prime_UTR 25.0%
! ATTAGTGGTTTATATGTTGT+TGG - tig0022477:12934-12953 Msa1400800:CDS 25.0%
!! TATTTTTCATTAAGGCTGAA+CGG - tig0022477:13241-13260 Msa1400800:CDS 25.0%
!! TTCTCAACCATTTCTTTTAT+AGG + tig0022477:13318-13337 None:intergenic 25.0%
! GTTTAGTTAGTTAGATACAA+TGG - tig0022477:13717-13736 Msa1400800:intron 25.0%
! AACAACAAAATAATCCAAGA+GGG + tig0022477:13882-13901 None:intergenic 25.0%
!! TTTTCCAAACTAAAATACGA+CGG - tig0022477:12339-12358 Msa1400800:three_prime_UTR 25.0%
!! TGTTTTACTCTTGAATACAA+AGG - tig0022477:12549-12568 Msa1400800:three_prime_UTR 25.0%
! TACTTAATATGACAAACAGA+TGG + tig0022477:12768-12787 None:intergenic 25.0%
!!! ACATATGCTTTTGTTATCTT+TGG - tig0022477:12833-12852 Msa1400800:three_prime_UTR 25.0%
!!! CATATGCTTTTGTTATCTTT+GGG - tig0022477:12834-12853 Msa1400800:three_prime_UTR 25.0%
! ATTAGTGGTTTATATGTTGT+TGG - tig0022477:12934-12953 Msa1400800:CDS 25.0%
!! TATTTTTCATTAAGGCTGAA+CGG - tig0022477:13241-13260 Msa1400800:CDS 25.0%
!! TTCTCAACCATTTCTTTTAT+AGG + tig0022477:13318-13337 None:intergenic 25.0%
! GTTTAGTTAGTTAGATACAA+TGG - tig0022477:13717-13736 Msa1400800:intron 25.0%
! AACAACAAAATAATCCAAGA+GGG + tig0022477:13882-13901 None:intergenic 25.0%
! ATAAAGTGTTTGCGTGAAAA+AGG + tig0022477:12525-12544 None:intergenic 30.0%
! AAAAGCTAACCTACCATTTT+TGG + tig0022477:12660-12679 None:intergenic 30.0%
!! ATCTTGGAGTTCTCTAAAAT+TGG + tig0022477:12687-12706 None:intergenic 30.0%
TCATATTAAGTAGTCTCTAC+TGG - tig0022477:12776-12795 Msa1400800:three_prime_UTR 30.0%
TGCAAATATCAGCTAATACA+AGG + tig0022477:13034-13053 None:intergenic 30.0%
ATTGAAGACATAAACCATTG+AGG + tig0022477:13060-13079 None:intergenic 30.0%
CAATGGTTTATGTCTTCAAT+AGG - tig0022477:13060-13079 Msa1400800:intron 30.0%
ACAGAAAGATAACCATGATT+TGG + tig0022477:13086-13105 None:intergenic 30.0%
!! GTGTAAATTAATTTGCATGC+AGG + tig0022477:13195-13214 None:intergenic 30.0%
GCATGCAAATTAATTTACAC+CGG - tig0022477:13195-13214 Msa1400800:CDS 30.0%
!! CAATAAGCTCTTTGAAACTA+TGG + tig0022477:13272-13291 None:intergenic 30.0%
AAAGAGCTTATTGATGAGTA+TGG - tig0022477:13279-13298 Msa1400800:CDS 30.0%
AAAGGAAATTCAAATTCTGG+AGG + tig0022477:13396-13415 None:intergenic 30.0%
CTCAAAGGAAATTCAAATTC+TGG + tig0022477:13399-13418 None:intergenic 30.0%
TCAAATGTAAAATCCAGGTT+AGG + tig0022477:13495-13514 None:intergenic 30.0%
CAATGTCAAATGTAAAATCC+AGG + tig0022477:13500-13519 None:intergenic 30.0%
! CTGGATTTTACATTTGACAT+TGG - tig0022477:13498-13517 Msa1400800:CDS 30.0%
! TGAAAATTTGCTTGTGCTTA+GGG - tig0022477:13522-13541 Msa1400800:CDS 30.0%
ACAACAAAATAATCCAAGAG+GGG + tig0022477:13881-13900 None:intergenic 30.0%
CAACAACAAAATAATCCAAG+AGG + tig0022477:13883-13902 None:intergenic 30.0%
GGTATCACTATAACGTATAA+AGG + tig0022477:13913-13932 None:intergenic 30.0%
CAAAAGGTTAAATTCCAGTA+GGG + tig0022477:14204-14223 None:intergenic 30.0%
TCAAAAGGTTAAATTCCAGT+AGG + tig0022477:14205-14224 None:intergenic 30.0%
! TACTGGAATTTAACCTTTTG+AGG - tig0022477:14204-14223 Msa1400800:five_prime_UTR 30.0%
! ACTGGAATTTAACCTTTTGA+GGG - tig0022477:14205-14224 Msa1400800:five_prime_UTR 30.0%
AAAGTGAAATTTCCCTCAAA+AGG + tig0022477:14220-14239 None:intergenic 30.0%
! ATAAAGTGTTTGCGTGAAAA+AGG + tig0022477:12525-12544 None:intergenic 30.0%
! AAAAGCTAACCTACCATTTT+TGG + tig0022477:12660-12679 None:intergenic 30.0%
!! ATCTTGGAGTTCTCTAAAAT+TGG + tig0022477:12687-12706 None:intergenic 30.0%
TCATATTAAGTAGTCTCTAC+TGG - tig0022477:12776-12795 Msa1400800:three_prime_UTR 30.0%
TGCAAATATCAGCTAATACA+AGG + tig0022477:13034-13053 None:intergenic 30.0%
ATTGAAGACATAAACCATTG+AGG + tig0022477:13060-13079 None:intergenic 30.0%
CAATGGTTTATGTCTTCAAT+AGG - tig0022477:13060-13079 Msa1400800:intron 30.0%
ACAGAAAGATAACCATGATT+TGG + tig0022477:13086-13105 None:intergenic 30.0%
!! GTGTAAATTAATTTGCATGC+AGG + tig0022477:13195-13214 None:intergenic 30.0%
GCATGCAAATTAATTTACAC+CGG - tig0022477:13195-13214 Msa1400800:CDS 30.0%
!! CAATAAGCTCTTTGAAACTA+TGG + tig0022477:13272-13291 None:intergenic 30.0%
AAAGAGCTTATTGATGAGTA+TGG - tig0022477:13279-13298 Msa1400800:CDS 30.0%
AAAGGAAATTCAAATTCTGG+AGG + tig0022477:13396-13415 None:intergenic 30.0%
CTCAAAGGAAATTCAAATTC+TGG + tig0022477:13399-13418 None:intergenic 30.0%
TCAAATGTAAAATCCAGGTT+AGG + tig0022477:13495-13514 None:intergenic 30.0%
CAATGTCAAATGTAAAATCC+AGG + tig0022477:13500-13519 None:intergenic 30.0%
! CTGGATTTTACATTTGACAT+TGG - tig0022477:13498-13517 Msa1400800:CDS 30.0%
! TGAAAATTTGCTTGTGCTTA+GGG - tig0022477:13522-13541 Msa1400800:CDS 30.0%
ACAACAAAATAATCCAAGAG+GGG + tig0022477:13881-13900 None:intergenic 30.0%
CAACAACAAAATAATCCAAG+AGG + tig0022477:13883-13902 None:intergenic 30.0%
GGTATCACTATAACGTATAA+AGG + tig0022477:13913-13932 None:intergenic 30.0%
CAAAAGGTTAAATTCCAGTA+GGG + tig0022477:14204-14223 None:intergenic 30.0%
TCAAAAGGTTAAATTCCAGT+AGG + tig0022477:14205-14224 None:intergenic 30.0%
! TACTGGAATTTAACCTTTTG+AGG - tig0022477:14204-14223 Msa1400800:five_prime_UTR 30.0%
! ACTGGAATTTAACCTTTTGA+GGG - tig0022477:14205-14224 Msa1400800:five_prime_UTR 30.0%
AAAGTGAAATTTCCCTCAAA+AGG + tig0022477:14220-14239 None:intergenic 30.0%
AAGCTCAGCTATGTGTATAA+CGG - tig0022477:12393-12412 Msa1400800:intron 35.0%
ACAGAGACGAATTTCATTCT+CGG - tig0022477:12464-12483 Msa1400800:three_prime_UTR 35.0%
TGACCTGAATAAATCGAAGT+GGG + tig0022477:12739-12758 None:intergenic 35.0%
ATGACCTGAATAAATCGAAG+TGG + tig0022477:12740-12759 None:intergenic 35.0%
CTTCTTGAAAACTCAGTATC+CGG + tig0022477:12860-12879 None:intergenic 35.0%
!!! CTGTTTGTTAGTTTTGTCCT+TGG - tig0022477:12901-12920 Msa1400800:three_prime_UTR 35.0%
AAAGAGGCTCATCTATACAA+CGG - tig0022477:13002-13021 Msa1400800:CDS 35.0%
AGTAACCATGTGTATACCTT+TGG + tig0022477:13158-13177 None:intergenic 35.0%
TAGTAGCGTCAAAATTCATC+CGG + tig0022477:13217-13236 None:intergenic 35.0%
TCGACAAATATCGAACTCAA+AGG + tig0022477:13414-13433 None:intergenic 35.0%
TGTTAATTAGTTACCACCGA+AGG + tig0022477:13447-13466 None:intergenic 35.0%
! CTGAAAATTTGCTTGTGCTT+AGG - tig0022477:13521-13540 Msa1400800:CDS 35.0%
! GAAAATTTGCTTGTGCTTAG+GGG - tig0022477:13523-13542 Msa1400800:CDS 35.0%
TGATGTAACAAACAAAGCAG+AGG + tig0022477:13568-13587 None:intergenic 35.0%
CACATTCTATGAGAAACATC+TGG - tig0022477:13599-13618 Msa1400800:CDS 35.0%
ACTGGTTGATTAAATTCGTG+AGG + tig0022477:13790-13809 None:intergenic 35.0%
! TTTTTCACATTTTCCCCTCT+TGG - tig0022477:13865-13884 Msa1400800:CDS 35.0%
TCAGATTGTCACATCTGATT+TGG - tig0022477:14094-14113 Msa1400800:intron 35.0%
CAGATTGTCACATCTGATTT+GGG - tig0022477:14095-14114 Msa1400800:intron 35.0%
! GTAAGATACATTTTCCCTAC+TGG - tig0022477:14187-14206 Msa1400800:exon 35.0%
! CTTGCTATGCAGAACTTTAT+AGG + tig0022477:14251-14270 None:intergenic 35.0%
CTATAAAGTTCTGCATAGCA+AGG - tig0022477:14249-14268 Msa1400800:five_prime_UTR 35.0%
AAGCTCAGCTATGTGTATAA+CGG - tig0022477:12393-12412 Msa1400800:intron 35.0%
ACAGAGACGAATTTCATTCT+CGG - tig0022477:12464-12483 Msa1400800:three_prime_UTR 35.0%
TGACCTGAATAAATCGAAGT+GGG + tig0022477:12739-12758 None:intergenic 35.0%
ATGACCTGAATAAATCGAAG+TGG + tig0022477:12740-12759 None:intergenic 35.0%
CTTCTTGAAAACTCAGTATC+CGG + tig0022477:12860-12879 None:intergenic 35.0%
!!! CTGTTTGTTAGTTTTGTCCT+TGG - tig0022477:12901-12920 Msa1400800:three_prime_UTR 35.0%
AAAGAGGCTCATCTATACAA+CGG - tig0022477:13002-13021 Msa1400800:CDS 35.0%
AGTAACCATGTGTATACCTT+TGG + tig0022477:13158-13177 None:intergenic 35.0%
TAGTAGCGTCAAAATTCATC+CGG + tig0022477:13217-13236 None:intergenic 35.0%
TCGACAAATATCGAACTCAA+AGG + tig0022477:13414-13433 None:intergenic 35.0%
TGTTAATTAGTTACCACCGA+AGG + tig0022477:13447-13466 None:intergenic 35.0%
! CTGAAAATTTGCTTGTGCTT+AGG - tig0022477:13521-13540 Msa1400800:CDS 35.0%
! GAAAATTTGCTTGTGCTTAG+GGG - tig0022477:13523-13542 Msa1400800:CDS 35.0%
TGATGTAACAAACAAAGCAG+AGG + tig0022477:13568-13587 None:intergenic 35.0%
CACATTCTATGAGAAACATC+TGG - tig0022477:13599-13618 Msa1400800:CDS 35.0%
ACTGGTTGATTAAATTCGTG+AGG + tig0022477:13790-13809 None:intergenic 35.0%
! TTTTTCACATTTTCCCCTCT+TGG - tig0022477:13865-13884 Msa1400800:CDS 35.0%
TCAGATTGTCACATCTGATT+TGG - tig0022477:14094-14113 Msa1400800:intron 35.0%
CAGATTGTCACATCTGATTT+GGG - tig0022477:14095-14114 Msa1400800:intron 35.0%
! GTAAGATACATTTTCCCTAC+TGG - tig0022477:14187-14206 Msa1400800:exon 35.0%
! CTTGCTATGCAGAACTTTAT+AGG + tig0022477:14251-14270 None:intergenic 35.0%
CTATAAAGTTCTGCATAGCA+AGG - tig0022477:14249-14268 Msa1400800:five_prime_UTR 35.0%
!!! CTGACCGTCGTATTTTAGTT+TGG + tig0022477:12346-12365 None:intergenic 40.0%
AACTAAAATACGACGGTCAG+TGG - tig0022477:12346-12365 Msa1400800:three_prime_UTR 40.0%
ACTAAAATACGACGGTCAGT+GGG - tig0022477:12347-12366 Msa1400800:three_prime_UTR 40.0%
TGTGTATAACGGTGTTCATG+TGG - tig0022477:12404-12423 Msa1400800:intron 40.0%
!! AAGAGGAGGAAAGGGTATTT+CGG + tig0022477:12439-12458 None:intergenic 40.0%
TGTTGAGTAAGAGGAGGAAA+GGG + tig0022477:12447-12466 None:intergenic 40.0%
ATTCGTCTCTGTTGAGTAAG+AGG + tig0022477:12456-12475 None:intergenic 40.0%
!! TGGTTGGCTTCTTCCAAAAA+TGG - tig0022477:12644-12663 Msa1400800:three_prime_UTR 40.0%
TGGCTTCTTCCAAAAATGGT+AGG - tig0022477:12648-12667 Msa1400800:three_prime_UTR 40.0%
! TTTTGGGCTGTGGAATATCT+TGG + tig0022477:12703-12722 None:intergenic 40.0%
TCTCCCACTTCGATTTATTC+AGG - tig0022477:12733-12752 Msa1400800:three_prime_UTR 40.0%
!! TGCTTTTGTTATCTTTGGGC+CGG - tig0022477:12838-12857 Msa1400800:three_prime_UTR 40.0%
CACTAATGAATGCACATCCA+AGG + tig0022477:12921-12940 None:intergenic 40.0%
CTTGGATGTGCATTCATTAG+TGG - tig0022477:12919-12938 Msa1400800:exon 40.0%
TGATATTTGCACCTCCTCAA+TGG - tig0022477:13043-13062 Msa1400800:intron 40.0%
GAAGACATAAACCATTGAGG+AGG + tig0022477:13057-13076 None:intergenic 40.0%
GTCTTCAATAGGCCAAATCA+TGG - tig0022477:13071-13090 Msa1400800:intron 40.0%
TAGTCAAGACGTGAATTCCA+GGG + tig0022477:13112-13131 None:intergenic 40.0%
TTAGTCAAGACGTGAATTCC+AGG + tig0022477:13113-13132 None:intergenic 40.0%
!! ATGAAAAGTGCTTGCTACCA+GGG - tig0022477:13364-13383 Msa1400800:intron 40.0%
TGTCGACACACAATTTCCTT+CGG - tig0022477:13428-13447 Msa1400800:intron 40.0%
GGCTTAAGCATGCAAAAAAG+TGG + tig0022477:13474-13493 None:intergenic 40.0%
AACATCTGGATCAGAAGCAA+TGG - tig0022477:13613-13632 Msa1400800:CDS 40.0%
GAAGCAATGGAAAGAGAACA+TGG - tig0022477:13626-13645 Msa1400800:intron 40.0%
TTACCCTGTTTAGTGAGGAT+TGG - tig0022477:13816-13835 Msa1400800:intron 40.0%
GATCCAATCCTCACTAAACA+GGG + tig0022477:13822-13841 None:intergenic 40.0%
TGATCCAATCCTCACTAAAC+AGG + tig0022477:13823-13842 None:intergenic 40.0%
TTAGTGAGGATTGGATCAGT+TGG - tig0022477:13825-13844 Msa1400800:intron 40.0%
CTTAGTCGTGTAGAACATTG+CGG - tig0022477:14164-14183 Msa1400800:CDS 40.0%
TTAGTCGTGTAGAACATTGC+GGG - tig0022477:14165-14184 Msa1400800:CDS 40.0%
!!! CTGACCGTCGTATTTTAGTT+TGG + tig0022477:12346-12365 None:intergenic 40.0%
AACTAAAATACGACGGTCAG+TGG - tig0022477:12346-12365 Msa1400800:three_prime_UTR 40.0%
ACTAAAATACGACGGTCAGT+GGG - tig0022477:12347-12366 Msa1400800:three_prime_UTR 40.0%
TGTGTATAACGGTGTTCATG+TGG - tig0022477:12404-12423 Msa1400800:intron 40.0%
!! AAGAGGAGGAAAGGGTATTT+CGG + tig0022477:12439-12458 None:intergenic 40.0%
TGTTGAGTAAGAGGAGGAAA+GGG + tig0022477:12447-12466 None:intergenic 40.0%
ATTCGTCTCTGTTGAGTAAG+AGG + tig0022477:12456-12475 None:intergenic 40.0%
!! TGGTTGGCTTCTTCCAAAAA+TGG - tig0022477:12644-12663 Msa1400800:three_prime_UTR 40.0%
TGGCTTCTTCCAAAAATGGT+AGG - tig0022477:12648-12667 Msa1400800:three_prime_UTR 40.0%
! TTTTGGGCTGTGGAATATCT+TGG + tig0022477:12703-12722 None:intergenic 40.0%
TCTCCCACTTCGATTTATTC+AGG - tig0022477:12733-12752 Msa1400800:three_prime_UTR 40.0%
!! TGCTTTTGTTATCTTTGGGC+CGG - tig0022477:12838-12857 Msa1400800:three_prime_UTR 40.0%
CACTAATGAATGCACATCCA+AGG + tig0022477:12921-12940 None:intergenic 40.0%
CTTGGATGTGCATTCATTAG+TGG - tig0022477:12919-12938 Msa1400800:exon 40.0%
TGATATTTGCACCTCCTCAA+TGG - tig0022477:13043-13062 Msa1400800:intron 40.0%
GAAGACATAAACCATTGAGG+AGG + tig0022477:13057-13076 None:intergenic 40.0%
GTCTTCAATAGGCCAAATCA+TGG - tig0022477:13071-13090 Msa1400800:intron 40.0%
TAGTCAAGACGTGAATTCCA+GGG + tig0022477:13112-13131 None:intergenic 40.0%
TTAGTCAAGACGTGAATTCC+AGG + tig0022477:13113-13132 None:intergenic 40.0%
!! ATGAAAAGTGCTTGCTACCA+GGG - tig0022477:13364-13383 Msa1400800:intron 40.0%
TGTCGACACACAATTTCCTT+CGG - tig0022477:13428-13447 Msa1400800:intron 40.0%
GGCTTAAGCATGCAAAAAAG+TGG + tig0022477:13474-13493 None:intergenic 40.0%
AACATCTGGATCAGAAGCAA+TGG - tig0022477:13613-13632 Msa1400800:CDS 40.0%
GAAGCAATGGAAAGAGAACA+TGG - tig0022477:13626-13645 Msa1400800:intron 40.0%
TTACCCTGTTTAGTGAGGAT+TGG - tig0022477:13816-13835 Msa1400800:intron 40.0%
GATCCAATCCTCACTAAACA+GGG + tig0022477:13822-13841 None:intergenic 40.0%
TGATCCAATCCTCACTAAAC+AGG + tig0022477:13823-13842 None:intergenic 40.0%
TTAGTGAGGATTGGATCAGT+TGG - tig0022477:13825-13844 Msa1400800:intron 40.0%
CTTAGTCGTGTAGAACATTG+CGG - tig0022477:14164-14183 Msa1400800:CDS 40.0%
TTAGTCGTGTAGAACATTGC+GGG - tig0022477:14165-14184 Msa1400800:CDS 40.0%
CTAAAATACGACGGTCAGTG+GGG - tig0022477:12348-12367 Msa1400800:three_prime_UTR 45.0%
CTGTTGAGTAAGAGGAGGAA+AGG + tig0022477:12448-12467 None:intergenic 45.0%
ACAAAGGCCTACAGAACCAT+TGG - tig0022477:12565-12584 Msa1400800:three_prime_UTR 45.0%
TACAGAACCATTGGCATGGT+GGG - tig0022477:12574-12593 Msa1400800:three_prime_UTR 45.0%
ATTCCACAGCCCAAAACTAG+AGG - tig0022477:12707-12726 Msa1400800:three_prime_UTR 45.0%
GGTTATCTTTCTGTTACCCC+TGG - tig0022477:13092-13111 Msa1400800:intron 45.0%
AGTCAAGACGTGAATTCCAG+GGG + tig0022477:13111-13130 None:intergenic 45.0%
CGTCTTGACTAATGCACCAT+TGG - tig0022477:13121-13140 Msa1400800:intron 45.0%
CATGTGTATACCTTTGGCCA+AGG + tig0022477:13152-13171 None:intergenic 45.0%
! CTTGGCCAAAGGTATACACA+TGG - tig0022477:13150-13169 Msa1400800:intron 45.0%
!! GATGAAAAGTGCTTGCTACC+AGG - tig0022477:13363-13382 Msa1400800:intron 45.0%
TTGCATGCTTAAGCCTAACC+TGG - tig0022477:13479-13498 Msa1400800:CDS 45.0%
GATCAGTGAGACACAGTGAA+TGG - tig0022477:13659-13678 Msa1400800:intron 45.0%
! ATTGACAAGGTGCTAGTGAG+TGG + tig0022477:13748-13767 None:intergenic 45.0%
TAAACAGGGTAAGACTGGAC+TGG + tig0022477:13808-13827 None:intergenic 45.0%
CTCACTAAACAGGGTAAGAC+TGG + tig0022477:13813-13832 None:intergenic 45.0%
CAGTCTTACCCTGTTTAGTG+AGG - tig0022477:13811-13830 Msa1400800:intron 45.0%
!! GCATGTGCTCATTCTGAAAC+CGG + tig0022477:13947-13966 None:intergenic 45.0%
AATGAGCACATGCTCACCTT+GGG - tig0022477:13954-13973 Msa1400800:CDS 45.0%
ATAAAAGCAAGCTAGCCCCA+AGG + tig0022477:13973-13992 None:intergenic 45.0%
CTAAAATACGACGGTCAGTG+GGG - tig0022477:12348-12367 Msa1400800:three_prime_UTR 45.0%
CTGTTGAGTAAGAGGAGGAA+AGG + tig0022477:12448-12467 None:intergenic 45.0%
ACAAAGGCCTACAGAACCAT+TGG - tig0022477:12565-12584 Msa1400800:three_prime_UTR 45.0%
TACAGAACCATTGGCATGGT+GGG - tig0022477:12574-12593 Msa1400800:three_prime_UTR 45.0%
ATTCCACAGCCCAAAACTAG+AGG - tig0022477:12707-12726 Msa1400800:three_prime_UTR 45.0%
GGTTATCTTTCTGTTACCCC+TGG - tig0022477:13092-13111 Msa1400800:intron 45.0%
AGTCAAGACGTGAATTCCAG+GGG + tig0022477:13111-13130 None:intergenic 45.0%
CGTCTTGACTAATGCACCAT+TGG - tig0022477:13121-13140 Msa1400800:intron 45.0%
CATGTGTATACCTTTGGCCA+AGG + tig0022477:13152-13171 None:intergenic 45.0%
! CTTGGCCAAAGGTATACACA+TGG - tig0022477:13150-13169 Msa1400800:intron 45.0%
!! GATGAAAAGTGCTTGCTACC+AGG - tig0022477:13363-13382 Msa1400800:intron 45.0%
TTGCATGCTTAAGCCTAACC+TGG - tig0022477:13479-13498 Msa1400800:CDS 45.0%
GATCAGTGAGACACAGTGAA+TGG - tig0022477:13659-13678 Msa1400800:intron 45.0%
! ATTGACAAGGTGCTAGTGAG+TGG + tig0022477:13748-13767 None:intergenic 45.0%
TAAACAGGGTAAGACTGGAC+TGG + tig0022477:13808-13827 None:intergenic 45.0%
CTCACTAAACAGGGTAAGAC+TGG + tig0022477:13813-13832 None:intergenic 45.0%
CAGTCTTACCCTGTTTAGTG+AGG - tig0022477:13811-13830 Msa1400800:intron 45.0%
!! GCATGTGCTCATTCTGAAAC+CGG + tig0022477:13947-13966 None:intergenic 45.0%
AATGAGCACATGCTCACCTT+GGG - tig0022477:13954-13973 Msa1400800:CDS 45.0%
ATAAAAGCAAGCTAGCCCCA+AGG + tig0022477:13973-13992 None:intergenic 45.0%
CGTCTCTGTTGAGTAAGAGG+AGG + tig0022477:12453-12472 None:intergenic 50.0%
! CACCATGCCAATGGTTCTGT+AGG + tig0022477:12575-12594 None:intergenic 50.0%
CTACAGAACCATTGGCATGG+TGG - tig0022477:12573-12592 Msa1400800:three_prime_UTR 50.0%
TGGGACGGCGAAACAATCTT+AGG - tig0022477:12593-12612 Msa1400800:three_prime_UTR 50.0%
GACGGCGAAACAATCTTAGG+CGG - tig0022477:12596-12615 Msa1400800:three_prime_UTR 50.0%
GGCGGTAGAGATATACTCTG+CGG - tig0022477:12614-12633 Msa1400800:three_prime_UTR 50.0%
GCGGTAGAGATATACTCTGC+GGG - tig0022477:12615-12634 Msa1400800:three_prime_UTR 50.0%
CGGTAGAGATATACTCTGCG+GGG - tig0022477:12616-12635 Msa1400800:three_prime_UTR 50.0%
GGTAGAGATATACTCTGCGG+GGG - tig0022477:12617-12636 Msa1400800:three_prime_UTR 50.0%
!!! GGGAGATCGCCTCTAGTTTT+GGG + tig0022477:12719-12738 None:intergenic 50.0%
!! TGGGAGATCGCCTCTAGTTT+TGG + tig0022477:12720-12739 None:intergenic 50.0%
ATGCACCATTGGATGCTCCT+TGG - tig0022477:13132-13151 Msa1400800:intron 50.0%
!! TTTGGCCAAGGAGCATCCAA+TGG + tig0022477:13140-13159 None:intergenic 50.0%
ATTGGATGCTCCTTGGCCAA+AGG - tig0022477:13139-13158 Msa1400800:intron 50.0%
! AATTCTGGAGGACGAATCCC+TGG + tig0022477:13384-13403 None:intergenic 50.0%
CGACACACAATTTCCTTCGG+TGG - tig0022477:13431-13450 Msa1400800:intron 50.0%
! GAGGTGCTCCTAGTACCATA+CGG + tig0022477:13549-13568 None:intergenic 50.0%
!! CTCATTCTGAAACCGGTGCA+TGG + tig0022477:13940-13959 None:intergenic 50.0%
GAATGAGCACATGCTCACCT+TGG - tig0022477:13953-13972 Msa1400800:CDS 50.0%
ATGAGCACATGCTCACCTTG+GGG - tig0022477:13955-13974 Msa1400800:CDS 50.0%
CGTCTCTGTTGAGTAAGAGG+AGG + tig0022477:12453-12472 None:intergenic 50.0%
! CACCATGCCAATGGTTCTGT+AGG + tig0022477:12575-12594 None:intergenic 50.0%
CTACAGAACCATTGGCATGG+TGG - tig0022477:12573-12592 Msa1400800:three_prime_UTR 50.0%
TGGGACGGCGAAACAATCTT+AGG - tig0022477:12593-12612 Msa1400800:three_prime_UTR 50.0%
GACGGCGAAACAATCTTAGG+CGG - tig0022477:12596-12615 Msa1400800:three_prime_UTR 50.0%
GGCGGTAGAGATATACTCTG+CGG - tig0022477:12614-12633 Msa1400800:three_prime_UTR 50.0%
GCGGTAGAGATATACTCTGC+GGG - tig0022477:12615-12634 Msa1400800:three_prime_UTR 50.0%
CGGTAGAGATATACTCTGCG+GGG - tig0022477:12616-12635 Msa1400800:three_prime_UTR 50.0%
GGTAGAGATATACTCTGCGG+GGG - tig0022477:12617-12636 Msa1400800:three_prime_UTR 50.0%
!!! GGGAGATCGCCTCTAGTTTT+GGG + tig0022477:12719-12738 None:intergenic 50.0%
!! TGGGAGATCGCCTCTAGTTT+TGG + tig0022477:12720-12739 None:intergenic 50.0%
ATGCACCATTGGATGCTCCT+TGG - tig0022477:13132-13151 Msa1400800:intron 50.0%
!! TTTGGCCAAGGAGCATCCAA+TGG + tig0022477:13140-13159 None:intergenic 50.0%
ATTGGATGCTCCTTGGCCAA+AGG - tig0022477:13139-13158 Msa1400800:intron 50.0%
! AATTCTGGAGGACGAATCCC+TGG + tig0022477:13384-13403 None:intergenic 50.0%
CGACACACAATTTCCTTCGG+TGG - tig0022477:13431-13450 Msa1400800:intron 50.0%
! GAGGTGCTCCTAGTACCATA+CGG + tig0022477:13549-13568 None:intergenic 50.0%
!! CTCATTCTGAAACCGGTGCA+TGG + tig0022477:13940-13959 None:intergenic 50.0%
GAATGAGCACATGCTCACCT+TGG - tig0022477:13953-13972 Msa1400800:CDS 50.0%
ATGAGCACATGCTCACCTTG+GGG - tig0022477:13955-13974 Msa1400800:CDS 50.0%
GGCCTACAGAACCATTGGCA+TGG - tig0022477:12570-12589 Msa1400800:three_prime_UTR 55.0%
! GAACCATTGGCATGGTGGGA+CGG - tig0022477:12578-12597 Msa1400800:three_prime_UTR 55.0%
! ATATACTCTGCGGGGGTACG+TGG - tig0022477:12624-12643 Msa1400800:three_prime_UTR 55.0%
!!! TCGCCTCTAGTTTTGGGCTG+TGG + tig0022477:12713-12732 None:intergenic 55.0%
CAAGAGTCCCGAGGAGTTTG+CGG - tig0022477:12968-12987 Msa1400800:CDS 55.0%
ACTTCCTCCGCAAACTCCTC+GGG + tig0022477:12978-12997 None:intergenic 55.0%
CACTTCCTCCGCAAACTCCT+CGG + tig0022477:12979-12998 None:intergenic 55.0%
!! TGCGGAGGAAGTGCTCAAAG+AGG - tig0022477:12986-13005 Msa1400800:CDS 55.0%
CTTAGGGGCCGTATGGTACT+AGG - tig0022477:13538-13557 Msa1400800:CDS 55.0%
GTGATACCTGCACCATGCAC+CGG - tig0022477:13925-13944 Msa1400800:CDS 55.0%
GGCCTACAGAACCATTGGCA+TGG - tig0022477:12570-12589 Msa1400800:three_prime_UTR 55.0%
! GAACCATTGGCATGGTGGGA+CGG - tig0022477:12578-12597 Msa1400800:three_prime_UTR 55.0%
! ATATACTCTGCGGGGGTACG+TGG - tig0022477:12624-12643 Msa1400800:three_prime_UTR 55.0%
!!! TCGCCTCTAGTTTTGGGCTG+TGG + tig0022477:12713-12732 None:intergenic 55.0%
CAAGAGTCCCGAGGAGTTTG+CGG - tig0022477:12968-12987 Msa1400800:CDS 55.0%
ACTTCCTCCGCAAACTCCTC+GGG + tig0022477:12978-12997 None:intergenic 55.0%
CACTTCCTCCGCAAACTCCT+CGG + tig0022477:12979-12998 None:intergenic 55.0%
!! TGCGGAGGAAGTGCTCAAAG+AGG - tig0022477:12986-13005 Msa1400800:CDS 55.0%
CTTAGGGGCCGTATGGTACT+AGG - tig0022477:13538-13557 Msa1400800:CDS 55.0%
GTGATACCTGCACCATGCAC+CGG - tig0022477:13925-13944 Msa1400800:CDS 55.0%
ACAGAGCGACAAGAGTCCCG+AGG - tig0022477:12959-12978 Msa1400800:CDS 60.0%
GCTTGTGCTTAGGGGCCGTA+TGG - tig0022477:13531-13550 Msa1400800:CDS 60.0%
CTGAAACCGGTGCATGGTGC+AGG + tig0022477:13934-13953 None:intergenic 60.0%
ACAGAGCGACAAGAGTCCCG+AGG - tig0022477:12959-12978 Msa1400800:CDS 60.0%
GCTTGTGCTTAGGGGCCGTA+TGG - tig0022477:13531-13550 Msa1400800:CDS 60.0%
CTGAAACCGGTGCATGGTGC+AGG + tig0022477:13934-13953 None:intergenic 60.0%
TCGCCGTCCCACCATGCCAA+TGG + tig0022477:12584-12603 None:intergenic 65.0%
! ACTCTGCGGGGGTACGTGGT+TGG - tig0022477:12628-12647 Msa1400800:three_prime_UTR 65.0%
GAGTCCCGAGGAGTTTGCGG+AGG - tig0022477:12971-12990 Msa1400800:CDS 65.0%
TCGCCGTCCCACCATGCCAA+TGG + tig0022477:12584-12603 None:intergenic 65.0%
! ACTCTGCGGGGGTACGTGGT+TGG - tig0022477:12628-12647 Msa1400800:three_prime_UTR 65.0%
GAGTCCCGAGGAGTTTGCGG+AGG - tig0022477:12971-12990 Msa1400800:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0022477 gene 12325 14279 12325 ID=Msa1400800;Name=Msa1400800
tig0022477 mRNA 12325 14279 12325 ID=Msa1400800-mRNA-1;Parent=Msa1400800;Name=Msa1400800-mRNA-1;_AED=0.11;_eAED=0.11;_QI=78|1|1|1|0.8|0.66|6|580|265
tig0022477 exon 12325 12395 12325 ID=Msa1400800-mRNA-1:exon:17980;Parent=Msa1400800-mRNA-1
tig0022477 exon 12418 13061 12418 ID=Msa1400800-mRNA-1:exon:17979;Parent=Msa1400800-mRNA-1
tig0022477 exon 13152 13349 13152 ID=Msa1400800-mRNA-1:exon:17978;Parent=Msa1400800-mRNA-1
tig0022477 exon 13444 13641 13444 ID=Msa1400800-mRNA-1:exon:17977;Parent=Msa1400800-mRNA-1
tig0022477 exon 13850 14033 13850 ID=Msa1400800-mRNA-1:exon:17976;Parent=Msa1400800-mRNA-1
tig0022477 exon 14119 14279 14119 ID=Msa1400800-mRNA-1:exon:17975;Parent=Msa1400800-mRNA-1
tig0022477 five_prime_UTR 14202 14279 14202 ID=Msa1400800-mRNA-1:five_prime_utr;Parent=Msa1400800-mRNA-1
tig0022477 CDS 14119 14201 14119 ID=Msa1400800-mRNA-1:cds;Parent=Msa1400800-mRNA-1
tig0022477 CDS 13850 14033 13850 ID=Msa1400800-mRNA-1:cds;Parent=Msa1400800-mRNA-1
tig0022477 CDS 13444 13641 13444 ID=Msa1400800-mRNA-1:cds;Parent=Msa1400800-mRNA-1
tig0022477 CDS 13152 13349 13152 ID=Msa1400800-mRNA-1:cds;Parent=Msa1400800-mRNA-1
tig0022477 CDS 12927 13061 12927 ID=Msa1400800-mRNA-1:cds;Parent=Msa1400800-mRNA-1
tig0022477 three_prime_UTR 12418 12926 12418 ID=Msa1400800-mRNA-1:three_prime_utr;Parent=Msa1400800-mRNA-1
tig0022477 three_prime_UTR 12325 12395 12325 ID=Msa1400800-mRNA-1:three_prime_utr;Parent=Msa1400800-mRNA-1
Gene Sequence

>Msa1400800

ATGTGTATAACGGTGTTCATGTGGCAAGCTCATCCGAAATACCCTTTCCTCCTCTTACTCAACAGAGACGAATTTCATTCTCGGCCTACAGAACCATTGGCATGGTGGGACGGCGAAACAATCTTAGGCGGTAGAGATATACTCTGCGGGGGTACGTGGTTGGCTTCTTCCAAAAATGGTAGGTTAGCTTTTCTCACCAATTTTAGAGAACTCCAAGATATTCCACAGCCCAAAACTAGAGGCGATCTCCCACTTCGATTTATTCAGAGCGACAAGAGTCCCGAGGAGTTTGCGGAGGAAGTGCTCAAAGAGGCTCATCTATACAACGGTTTCAACCTTGTATTAGCTGATATTTGCACCTCCTCAATGGTTTATGTCTTCAATAGGCCAAATCATGGTTATCTTTCTGTTACCCCTGGAATTCACGTCTTGACTAATGCACCATTGGATGCTCCTTGGCCAAAGGCTGAACGGTTGCGCCATAGTTTCAAAGAGCTTATTGATGAGTATGGTGAACGTGAATTTCCTATAAAAGAAATGGTTGAGAAACTAATGACAAACACAGTTAAAGATGATGAAAAGTGCTTGCTACCAGGGATTCGTCCTCCAGAATTTGAATTTCCTTTGAGTTCGATATTTGTCGACACACAATTTCCTTCGGTGGGGCCGTATGGTACTAGGAGCACCTCTGCTTTGTTTGTTACATCAAACAAAAAAGTCACATTCTATGAGAAACATCTGGATCAGAAGCAATGGAAAGAGAACATGGTAACTTATCAGATCAGTGAGACACAGTGA
Protein sequence

>Msa1400800

MCITVFMWQAHPKYPFLLLLNRDEFHSRPTEPLAWWDGETILGGRDILCGGTWLASSKNGRLAFLTNFRELQDIPQPKTRGDLPLRFIQSDKSPEEFAEEVLKEAHLYNGFNLVLADICTSSMVYVFNRPNHGYLSVTPGIHVLTNAPLDAPWPKAERLRHSFKELIDEYGEREFPIKEMVEKLMTNTVKDDEKCLLPGIRPPEFEFPLSSIFVDTQFPSVGPYGTRSTSALFVTSNKKVTFYEKHLDQKQWKENMVTYQISETQ*