AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0610330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0610330 MtrunA17_Chr4g0043371 93.585 265 17 0 1 265 1 265 0.0 527
Msa0610330 MtrunA17_Chr3g0115621 50.628 239 112 4 29 263 6 242 1.02e-79 240
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0610330 AT4G38260.1 56.884 276 105 7 1 265 1 273 1.69e-106 310
Msa0610330 AT1G20740.2 33.094 278 148 15 1 261 1 257 7.24e-28 107
Msa0610330 AT1G20730.1 33.205 259 140 12 1 246 1 239 2.76e-27 106
Msa0610330 AT1G20680.2 28.571 273 172 11 1 261 1 262 8.64e-25 99.8
Msa0610330 AT1G20740.1 33.466 251 130 14 28 261 35 265 4.10e-24 98.2
Msa0610330 AT1G20680.1 28.049 246 154 11 28 261 36 270 3.23e-18 82.4

Find 103 sgRNAs with CRISPR-Local

Find 300 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGCTATGCAGAACTTTAT+AGG 0.199781 4_2:-58032789 None:intergenic
TGGGAGATCGCCTCTAGTTT+TGG 0.223738 4_2:-58031257 None:intergenic
ATCTTGGAGTTCTCTAAAAT+TGG 0.229435 4_2:-58031224 None:intergenic
TCAGATTGTCACATCTGATT+TGG 0.243610 4_2:+58032635 Msa0610330:three_prime_UTR
TCTCCCACTTCGATTTATTC+AGG 0.281725 4_2:+58031273 Msa0610330:CDS
CTCAAAGGAAATTCAAATTC+TGG 0.291452 4_2:-58031937 None:intergenic
AAAGAGCTTATTGATGAGTA+TGG 0.307520 4_2:+58031820 Msa0610330:CDS
CAATAAGCTCTTTGAAACTA+TGG 0.309883 4_2:-58031810 None:intergenic
CAGATTGTCACATCTGATTT+GGG 0.316989 4_2:+58032636 Msa0610330:three_prime_UTR
AAGAGGAGGAAAGGATATTT+CGG 0.340336 4_2:-58030976 None:intergenic
TGATCCAATCCTCACTAAAC+AGG 0.340954 4_2:-58032361 None:intergenic
CAATGGTTTATGTCTTCAAT+AGG 0.356326 4_2:+58031601 Msa0610330:CDS
GGTATCACTATAACGTATAA+AGG 0.377921 4_2:-58032451 None:intergenic
ACAGAAAGATAACCATGATT+TGG 0.383345 4_2:-58031624 None:intergenic
TGAATTTCCTATAAAAGAAA+TGG 0.389311 4_2:+58031849 Msa0610330:CDS
AATGAGCACATGCTCACCTT+GGG 0.414957 4_2:+58032495 Msa0610330:three_prime_UTR
TTAGTCAAGACGTGAATTCC+AGG 0.415005 4_2:-58031651 None:intergenic
AAAGTGAAATTTCCCTCAAA+AGG 0.416191 4_2:-58032758 None:intergenic
GGTTATCTTTCTGTTACCCC+TGG 0.432020 4_2:+58031633 Msa0610330:CDS
ATTCGTCTCTGTTGAGTAAG+AGG 0.443519 4_2:-58030993 None:intergenic
TTACCCTGTTTAGTGAGGAT+TGG 0.451636 4_2:+58032357 Msa0610330:three_prime_UTR
TGGGACGGCGAAACAATCTT+AGG 0.452901 4_2:+58031133 Msa0610330:CDS
CAAGAGTCCCGAGGAGTTTG+CGG 0.456257 4_2:+58031509 Msa0610330:CDS
CACATTCTATGAGAAACATC+TGG 0.464669 4_2:+58032140 Msa0610330:CDS
ACAGAGACGAATTTCATTCT+CGG 0.465466 4_2:+58031004 Msa0610330:CDS
CACTTCCTCCGCAAACTCCT+CGG 0.469339 4_2:-58031517 None:intergenic
TGATATTTGCACCTCCTCAA+TGG 0.469875 4_2:+58031584 Msa0610330:CDS
CTTAGGGGCCGTATGGTACT+AGG 0.472770 4_2:+58032079 Msa0610330:intron
CGTCTTGACTAATGCACCAT+TGG 0.481062 4_2:+58031662 Msa0610330:CDS
CTGAAACCGGTGCATGGTGC+AGG 0.482539 4_2:-58032472 None:intergenic
CTCACTAAACAGGGTAAGAC+TGG 0.484155 4_2:-58032351 None:intergenic
GTCTTCAATAGGCCAAATCA+TGG 0.490436 4_2:+58031612 Msa0610330:CDS
TGTCGACACACAATTTCCTT+CGG 0.494369 4_2:+58031969 Msa0610330:CDS
GATGAAAAGTGCTTGCTACC+AGG 0.494938 4_2:+58031904 Msa0610330:CDS
ACTTCCTCCGCAAACTCCTC+GGG 0.500852 4_2:-58031516 None:intergenic
TGGTTACACTATTTATTACA+AGG 0.503107 4_2:+58030855 None:intergenic
GAATGAGCACATGCTCACCT+TGG 0.510868 4_2:+58032494 Msa0610330:three_prime_UTR
GCATGTGCTCATTCTGAAAC+CGG 0.521386 4_2:-58032485 None:intergenic
TTAGTCGTGTAGAACATTGC+GGG 0.521483 4_2:+58032706 Msa0610330:three_prime_UTR
TCGCCGTCCCACCATGCCAA+TGG 0.523136 4_2:-58031121 None:intergenic
ACTAAAATACGACGGTCAGT+GGG 0.524749 4_2:+58030887 Msa0610330:five_prime_UTR
GTTTAGTTAGTTAGATACAA+TGG 0.527879 4_2:+58032258 Msa0610330:three_prime_UTR
CACCATGCCAATGGTTCTGT+AGG 0.531172 4_2:-58031112 None:intergenic
AACTAAAATACGACGGTCAG+TGG 0.531242 4_2:+58030886 Msa0610330:five_prime_UTR
ATGCACCATTGGATGCTCCT+TGG 0.531423 4_2:+58031673 Msa0610330:CDS
CGACACACAATTTCCTTCGG+TGG 0.533528 4_2:+58031972 Msa0610330:CDS
AACATCTGGATCAGAAGCAA+TGG 0.535521 4_2:+58032154 Msa0610330:CDS
GCTTGTGCTTAGGGGCCGTA+TGG 0.536592 4_2:+58032072 Msa0610330:intron
AAGCTCAGCTATGTGTATAA+CGG 0.547357 4_2:+58030933 Msa0610330:exon
AATTCTGGAGGACGAATCCC+TGG 0.548820 4_2:-58031922 None:intergenic
GCGGTAGAGATATACTCTGC+GGG 0.548843 4_2:+58031155 Msa0610330:CDS
GATCAGTGAGACACAGTGAA+TGG 0.554589 4_2:+58032200 Msa0610330:exon
ATGAAAAGTGCTTGCTACCA+GGG 0.555789 4_2:+58031905 Msa0610330:CDS
ACAAAGGCCTACAGAACCAT+TGG 0.556864 4_2:+58031105 Msa0610330:intron
CTGTTGAGTAAGAGGAGGAA+AGG 0.558432 4_2:-58030985 None:intergenic
CAGTCTTACCCTGTTTAGTG+AGG 0.567192 4_2:+58032352 Msa0610330:three_prime_UTR
TACAGAACCATTGGCATGGT+GGG 0.567524 4_2:+58031114 Msa0610330:CDS
TTAGTGAGGATTGGATCAGT+TGG 0.573193 4_2:+58032366 Msa0610330:three_prime_UTR
TGCAAATATCAGCTAATACA+AGG 0.587286 4_2:-58031572 None:intergenic
GTGATACCTGCACCATGCAC+CGG 0.588039 4_2:+58032466 Msa0610330:three_prime_UTR
GAACCATTGGCATGGTGGGA+CGG 0.589400 4_2:+58031118 Msa0610330:CDS
CTCATTCTGAAACCGGTGCA+TGG 0.591335 4_2:-58032478 None:intergenic
AACAACAAAATAATCCAAGA+GGG 0.596674 4_2:-58032420 None:intergenic
ATTGGATGCTCCTTGGCCAA+AGG 0.597415 4_2:+58031680 Msa0610330:CDS
CTTAGTCGTGTAGAACATTG+CGG 0.599587 4_2:+58032705 Msa0610330:three_prime_UTR
CATGTGTATACCTTTGGCCA+AGG 0.607377 4_2:-58031690 None:intergenic
TAGTCAAGACGTGAATTCCA+GGG 0.609514 4_2:-58031650 None:intergenic
TAAACAGGGTAAGACTGGAC+TGG 0.613878 4_2:-58032346 None:intergenic
TGTTAATTAGTTACCACCGA+AGG 0.614939 4_2:-58031985 None:intergenic
TCGACAAATATCGAACTCAA+AGG 0.618961 4_2:-58031952 None:intergenic
TTTGGCCAAGGAGCATCCAA+TGG 0.623802 4_2:-58031678 None:intergenic
ATTGACAAGGTGCTAGTGAG+TGG 0.628021 4_2:-58032286 None:intergenic
ATTCCACAGCCCAAAACTAG+AGG 0.629616 4_2:+58031247 Msa0610330:CDS
ATTGAAGACATAAACCATTG+AGG 0.630572 4_2:-58031598 None:intergenic
CTATAAAGTTCTGCATAGCA+AGG 0.630966 4_2:+58032790 Msa0610330:three_prime_UTR
GAAGCAATGGAAAGAGAACA+TGG 0.634459 4_2:+58032167 Msa0610330:CDS
TTATAAATAAAAGTTCAGCA+TGG 0.635820 4_2:+58032575 Msa0610330:three_prime_UTR
CAACAACAAAATAATCCAAG+AGG 0.636564 4_2:-58032421 None:intergenic
ACTGGTTGATTAAATTCGTG+AGG 0.636764 4_2:-58032328 None:intergenic
GAGTCCCGAGGAGTTTGCGG+AGG 0.637048 4_2:+58031512 Msa0610330:CDS
AAAGGAAATTCAAATTCTGG+AGG 0.638483 4_2:-58031934 None:intergenic
CGTCTCTGTTGAGTAAGAGG+AGG 0.638986 4_2:-58030990 None:intergenic
TGACCTGAATAAATCGAAGT+GGG 0.641166 4_2:-58031276 None:intergenic
GGCCTACAGAACCATTGGCA+TGG 0.641777 4_2:+58031110 Msa0610330:intron
ATGAGCACATGCTCACCTTG+GGG 0.649404 4_2:+58032496 Msa0610330:three_prime_UTR
GATCCAATCCTCACTAAACA+GGG 0.653669 4_2:-58032360 None:intergenic
CGGTAGAGATATACTCTGCG+GGG 0.659645 4_2:+58031156 Msa0610330:CDS
ATGACCTGAATAAATCGAAG+TGG 0.662417 4_2:-58031277 None:intergenic
GAGGTGCTCCTAGTACCATA+CGG 0.663675 4_2:-58032087 None:intergenic
TGTGTATAACGGTGTTCATG+TGG 0.667575 4_2:+58030944 Msa0610330:CDS
GGCGGTAGAGATATACTCTG+CGG 0.672664 4_2:+58031154 Msa0610330:CDS
TGATGTAACAAACAAAGCAG+AGG 0.675989 4_2:-58032106 None:intergenic
ATAAAAGCAAGCTAGCCCCA+AGG 0.676555 4_2:-58032511 None:intergenic
TGCGGAGGAAGTGCTCAAAG+AGG 0.679372 4_2:+58031527 Msa0610330:CDS
ACAGAGCGACAAGAGTCCCG+AGG 0.680141 4_2:+58031500 Msa0610330:intron
GAAGACATAAACCATTGAGG+AGG 0.681667 4_2:-58031595 None:intergenic
CTACAGAACCATTGGCATGG+TGG 0.682886 4_2:+58031113 Msa0610330:CDS
CTAAAATACGACGGTCAGTG+GGG 0.692689 4_2:+58030888 Msa0610330:five_prime_UTR
AGTCAAGACGTGAATTCCAG+GGG 0.696129 4_2:-58031649 None:intergenic
ACAACAAAATAATCCAAGAG+GGG 0.699752 4_2:-58032419 None:intergenic
AAAGAGGCTCATCTATACAA+CGG 0.707692 4_2:+58031543 Msa0610330:CDS
GACGGCGAAACAATCTTAGG+CGG 0.730697 4_2:+58031136 Msa0610330:CDS
GGTAGAGATATACTCTGCGG+GGG 0.739093 4_2:+58031157 Msa0610330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGGTTTTTTTTTAATATGTT+AGG + chr4_2:58031336-58031355 Msa0610330:intron 15.0%
!!! TGAACTTTTATTTATAAGAA+GGG - chr4_2:58032572-58032591 None:intergenic 15.0%
!!! TGGTTTTTTTTTAATATGTT+AGG + chr4_2:58031336-58031355 Msa0610330:intron 15.0%
!!! TGAACTTTTATTTATAAGAA+GGG - chr4_2:58032572-58032591 None:intergenic 15.0%
!!! ACTAAGTACATTTTTCATTA+AGG + chr4_2:58031774-58031793 Msa0610330:intron 20.0%
!! TGAATTTCCTATAAAAGAAA+TGG + chr4_2:58031849-58031868 Msa0610330:CDS 20.0%
!!! ACATTTTATTCATATTGACA+AGG - chr4_2:58032302-58032321 None:intergenic 20.0%
!!! CTGAACTTTTATTTATAAGA+AGG - chr4_2:58032573-58032592 None:intergenic 20.0%
!! TTATAAATAAAAGTTCAGCA+TGG + chr4_2:58032575-58032594 Msa0610330:three_prime_UTR 20.0%
!!! ACTAAGTACATTTTTCATTA+AGG + chr4_2:58031774-58031793 Msa0610330:intron 20.0%
!! TGAATTTCCTATAAAAGAAA+TGG + chr4_2:58031849-58031868 Msa0610330:CDS 20.0%
!!! ACATTTTATTCATATTGACA+AGG - chr4_2:58032302-58032321 None:intergenic 20.0%
!!! CTGAACTTTTATTTATAAGA+AGG - chr4_2:58032573-58032592 None:intergenic 20.0%
!! TTATAAATAAAAGTTCAGCA+TGG + chr4_2:58032575-58032594 Msa0610330:three_prime_UTR 20.0%
!! TTTTCCAAACTAAAATACGA+CGG + chr4_2:58030879-58030898 Msa0610330:five_prime_UTR 25.0%
!! TGTTTTACTCTTGAATACAA+AGG + chr4_2:58031089-58031108 Msa0610330:intron 25.0%
! TACTTAATATGACAAACAGA+TGG - chr4_2:58031308-58031327 None:intergenic 25.0%
!!! ACATATGCTTTTGTTATCTT+TGG + chr4_2:58031373-58031392 Msa0610330:intron 25.0%
!!! CATATGCTTTTGTTATCTTT+GGG + chr4_2:58031374-58031393 Msa0610330:intron 25.0%
! ATTAGTGGTTTATATGTTGT+TGG + chr4_2:58031475-58031494 Msa0610330:intron 25.0%
!! TTCTCAACCATTTCTTTTAT+AGG - chr4_2:58031859-58031878 None:intergenic 25.0%
! GTTTAGTTAGTTAGATACAA+TGG + chr4_2:58032258-58032277 Msa0610330:three_prime_UTR 25.0%
! AACAACAAAATAATCCAAGA+GGG - chr4_2:58032423-58032442 None:intergenic 25.0%
!! TTTTCCAAACTAAAATACGA+CGG + chr4_2:58030879-58030898 Msa0610330:five_prime_UTR 25.0%
!! TGTTTTACTCTTGAATACAA+AGG + chr4_2:58031089-58031108 Msa0610330:intron 25.0%
! TACTTAATATGACAAACAGA+TGG - chr4_2:58031308-58031327 None:intergenic 25.0%
!!! ACATATGCTTTTGTTATCTT+TGG + chr4_2:58031373-58031392 Msa0610330:intron 25.0%
!!! CATATGCTTTTGTTATCTTT+GGG + chr4_2:58031374-58031393 Msa0610330:intron 25.0%
! ATTAGTGGTTTATATGTTGT+TGG + chr4_2:58031475-58031494 Msa0610330:intron 25.0%
!! TTCTCAACCATTTCTTTTAT+AGG - chr4_2:58031859-58031878 None:intergenic 25.0%
! GTTTAGTTAGTTAGATACAA+TGG + chr4_2:58032258-58032277 Msa0610330:three_prime_UTR 25.0%
! AACAACAAAATAATCCAAGA+GGG - chr4_2:58032423-58032442 None:intergenic 25.0%
! ATAAAGTGTTTGCGTGAAAA+AGG - chr4_2:58031065-58031084 None:intergenic 30.0%
! AAAAGCTAACCTACCATTTT+TGG - chr4_2:58031200-58031219 None:intergenic 30.0%
!! ATCTTGGAGTTCTCTAAAAT+TGG - chr4_2:58031227-58031246 None:intergenic 30.0%
TCATATTAAGTAGTCTCTAC+TGG + chr4_2:58031316-58031335 Msa0610330:intron 30.0%
TGCAAATATCAGCTAATACA+AGG - chr4_2:58031575-58031594 None:intergenic 30.0%
ATTGAAGACATAAACCATTG+AGG - chr4_2:58031601-58031620 None:intergenic 30.0%
CAATGGTTTATGTCTTCAAT+AGG + chr4_2:58031601-58031620 Msa0610330:CDS 30.0%
ACAGAAAGATAACCATGATT+TGG - chr4_2:58031627-58031646 None:intergenic 30.0%
!! GTGTAAATTAATTTGCATGC+AGG - chr4_2:58031736-58031755 None:intergenic 30.0%
GCATGCAAATTAATTTACAC+CGG + chr4_2:58031736-58031755 Msa0610330:intron 30.0%
! CATTTTTCATTAAGGCTGAA+CGG + chr4_2:58031782-58031801 Msa0610330:intron 30.0%
!! CAATAAGCTCTTTGAAACTA+TGG - chr4_2:58031813-58031832 None:intergenic 30.0%
AAAGAGCTTATTGATGAGTA+TGG + chr4_2:58031820-58031839 Msa0610330:CDS 30.0%
AAAGGAAATTCAAATTCTGG+AGG - chr4_2:58031937-58031956 None:intergenic 30.0%
CTCAAAGGAAATTCAAATTC+TGG - chr4_2:58031940-58031959 None:intergenic 30.0%
TCAAATGTAAAATCCAGGTT+AGG - chr4_2:58032036-58032055 None:intergenic 30.0%
CAATGTCAAATGTAAAATCC+AGG - chr4_2:58032041-58032060 None:intergenic 30.0%
! CTGGATTTTACATTTGACAT+TGG + chr4_2:58032039-58032058 Msa0610330:intron 30.0%
! TGAAAATTTGCTTGTGCTTA+GGG + chr4_2:58032063-58032082 Msa0610330:intron 30.0%
ACAACAAAATAATCCAAGAG+GGG - chr4_2:58032422-58032441 None:intergenic 30.0%
CAACAACAAAATAATCCAAG+AGG - chr4_2:58032424-58032443 None:intergenic 30.0%
GGTATCACTATAACGTATAA+AGG - chr4_2:58032454-58032473 None:intergenic 30.0%
CAAAAGGTTAAATTCCAGTA+GGG - chr4_2:58032745-58032764 None:intergenic 30.0%
TCAAAAGGTTAAATTCCAGT+AGG - chr4_2:58032746-58032765 None:intergenic 30.0%
! TACTGGAATTTAACCTTTTG+AGG + chr4_2:58032745-58032764 Msa0610330:intron 30.0%
! ACTGGAATTTAACCTTTTGA+GGG + chr4_2:58032746-58032765 Msa0610330:intron 30.0%
AAAGTGAAATTTCCCTCAAA+AGG - chr4_2:58032761-58032780 None:intergenic 30.0%
! ATAAAGTGTTTGCGTGAAAA+AGG - chr4_2:58031065-58031084 None:intergenic 30.0%
! AAAAGCTAACCTACCATTTT+TGG - chr4_2:58031200-58031219 None:intergenic 30.0%
!! ATCTTGGAGTTCTCTAAAAT+TGG - chr4_2:58031227-58031246 None:intergenic 30.0%
TCATATTAAGTAGTCTCTAC+TGG + chr4_2:58031316-58031335 Msa0610330:intron 30.0%
TGCAAATATCAGCTAATACA+AGG - chr4_2:58031575-58031594 None:intergenic 30.0%
ATTGAAGACATAAACCATTG+AGG - chr4_2:58031601-58031620 None:intergenic 30.0%
CAATGGTTTATGTCTTCAAT+AGG + chr4_2:58031601-58031620 Msa0610330:CDS 30.0%
ACAGAAAGATAACCATGATT+TGG - chr4_2:58031627-58031646 None:intergenic 30.0%
!! GTGTAAATTAATTTGCATGC+AGG - chr4_2:58031736-58031755 None:intergenic 30.0%
GCATGCAAATTAATTTACAC+CGG + chr4_2:58031736-58031755 Msa0610330:intron 30.0%
! CATTTTTCATTAAGGCTGAA+CGG + chr4_2:58031782-58031801 Msa0610330:intron 30.0%
!! CAATAAGCTCTTTGAAACTA+TGG - chr4_2:58031813-58031832 None:intergenic 30.0%
AAAGAGCTTATTGATGAGTA+TGG + chr4_2:58031820-58031839 Msa0610330:CDS 30.0%
AAAGGAAATTCAAATTCTGG+AGG - chr4_2:58031937-58031956 None:intergenic 30.0%
CTCAAAGGAAATTCAAATTC+TGG - chr4_2:58031940-58031959 None:intergenic 30.0%
TCAAATGTAAAATCCAGGTT+AGG - chr4_2:58032036-58032055 None:intergenic 30.0%
CAATGTCAAATGTAAAATCC+AGG - chr4_2:58032041-58032060 None:intergenic 30.0%
! CTGGATTTTACATTTGACAT+TGG + chr4_2:58032039-58032058 Msa0610330:intron 30.0%
! TGAAAATTTGCTTGTGCTTA+GGG + chr4_2:58032063-58032082 Msa0610330:intron 30.0%
ACAACAAAATAATCCAAGAG+GGG - chr4_2:58032422-58032441 None:intergenic 30.0%
CAACAACAAAATAATCCAAG+AGG - chr4_2:58032424-58032443 None:intergenic 30.0%
GGTATCACTATAACGTATAA+AGG - chr4_2:58032454-58032473 None:intergenic 30.0%
CAAAAGGTTAAATTCCAGTA+GGG - chr4_2:58032745-58032764 None:intergenic 30.0%
TCAAAAGGTTAAATTCCAGT+AGG - chr4_2:58032746-58032765 None:intergenic 30.0%
! TACTGGAATTTAACCTTTTG+AGG + chr4_2:58032745-58032764 Msa0610330:intron 30.0%
! ACTGGAATTTAACCTTTTGA+GGG + chr4_2:58032746-58032765 Msa0610330:intron 30.0%
AAAGTGAAATTTCCCTCAAA+AGG - chr4_2:58032761-58032780 None:intergenic 30.0%
AAGCTCAGCTATGTGTATAA+CGG + chr4_2:58030933-58030952 Msa0610330:exon 35.0%
AAGAGGAGGAAAGGATATTT+CGG - chr4_2:58030979-58030998 None:intergenic 35.0%
ACAGAGACGAATTTCATTCT+CGG + chr4_2:58031004-58031023 Msa0610330:CDS 35.0%
TGACCTGAATAAATCGAAGT+GGG - chr4_2:58031279-58031298 None:intergenic 35.0%
ATGACCTGAATAAATCGAAG+TGG - chr4_2:58031280-58031299 None:intergenic 35.0%
CTTCTTGAAAACTCAGTATC+CGG - chr4_2:58031400-58031419 None:intergenic 35.0%
!!! CTGTTTGTTAGTTTTGTCCT+TGG + chr4_2:58031442-58031461 Msa0610330:intron 35.0%
AAAGAGGCTCATCTATACAA+CGG + chr4_2:58031543-58031562 Msa0610330:CDS 35.0%
AGTAACCATGTGTATACCTT+TGG - chr4_2:58031699-58031718 None:intergenic 35.0%
TAGTAGCGTCAAAATTCATC+CGG - chr4_2:58031758-58031777 None:intergenic 35.0%
TCGACAAATATCGAACTCAA+AGG - chr4_2:58031955-58031974 None:intergenic 35.0%
TGTTAATTAGTTACCACCGA+AGG - chr4_2:58031988-58032007 None:intergenic 35.0%
! CTGAAAATTTGCTTGTGCTT+AGG + chr4_2:58032062-58032081 Msa0610330:intron 35.0%
! GAAAATTTGCTTGTGCTTAG+GGG + chr4_2:58032064-58032083 Msa0610330:intron 35.0%
TGATGTAACAAACAAAGCAG+AGG - chr4_2:58032109-58032128 None:intergenic 35.0%
CACATTCTATGAGAAACATC+TGG + chr4_2:58032140-58032159 Msa0610330:CDS 35.0%
ACTGGTTGATTAAATTCGTG+AGG - chr4_2:58032331-58032350 None:intergenic 35.0%
! TTTTTCACATTTTCCCCTCT+TGG + chr4_2:58032406-58032425 Msa0610330:three_prime_UTR 35.0%
TCAGATTGTCACATCTGATT+TGG + chr4_2:58032635-58032654 Msa0610330:three_prime_UTR 35.0%
CAGATTGTCACATCTGATTT+GGG + chr4_2:58032636-58032655 Msa0610330:three_prime_UTR 35.0%
! GTAAGATACATTTTCCCTAC+TGG + chr4_2:58032728-58032747 Msa0610330:intron 35.0%
! CTTGCTATGCAGAACTTTAT+AGG - chr4_2:58032792-58032811 None:intergenic 35.0%
CTATAAAGTTCTGCATAGCA+AGG + chr4_2:58032790-58032809 Msa0610330:three_prime_UTR 35.0%
AAGCTCAGCTATGTGTATAA+CGG + chr4_2:58030933-58030952 Msa0610330:exon 35.0%
AAGAGGAGGAAAGGATATTT+CGG - chr4_2:58030979-58030998 None:intergenic 35.0%
ACAGAGACGAATTTCATTCT+CGG + chr4_2:58031004-58031023 Msa0610330:CDS 35.0%
TGACCTGAATAAATCGAAGT+GGG - chr4_2:58031279-58031298 None:intergenic 35.0%
ATGACCTGAATAAATCGAAG+TGG - chr4_2:58031280-58031299 None:intergenic 35.0%
CTTCTTGAAAACTCAGTATC+CGG - chr4_2:58031400-58031419 None:intergenic 35.0%
!!! CTGTTTGTTAGTTTTGTCCT+TGG + chr4_2:58031442-58031461 Msa0610330:intron 35.0%
AAAGAGGCTCATCTATACAA+CGG + chr4_2:58031543-58031562 Msa0610330:CDS 35.0%
AGTAACCATGTGTATACCTT+TGG - chr4_2:58031699-58031718 None:intergenic 35.0%
TAGTAGCGTCAAAATTCATC+CGG - chr4_2:58031758-58031777 None:intergenic 35.0%
TCGACAAATATCGAACTCAA+AGG - chr4_2:58031955-58031974 None:intergenic 35.0%
TGTTAATTAGTTACCACCGA+AGG - chr4_2:58031988-58032007 None:intergenic 35.0%
! CTGAAAATTTGCTTGTGCTT+AGG + chr4_2:58032062-58032081 Msa0610330:intron 35.0%
! GAAAATTTGCTTGTGCTTAG+GGG + chr4_2:58032064-58032083 Msa0610330:intron 35.0%
TGATGTAACAAACAAAGCAG+AGG - chr4_2:58032109-58032128 None:intergenic 35.0%
CACATTCTATGAGAAACATC+TGG + chr4_2:58032140-58032159 Msa0610330:CDS 35.0%
ACTGGTTGATTAAATTCGTG+AGG - chr4_2:58032331-58032350 None:intergenic 35.0%
! TTTTTCACATTTTCCCCTCT+TGG + chr4_2:58032406-58032425 Msa0610330:three_prime_UTR 35.0%
TCAGATTGTCACATCTGATT+TGG + chr4_2:58032635-58032654 Msa0610330:three_prime_UTR 35.0%
CAGATTGTCACATCTGATTT+GGG + chr4_2:58032636-58032655 Msa0610330:three_prime_UTR 35.0%
! GTAAGATACATTTTCCCTAC+TGG + chr4_2:58032728-58032747 Msa0610330:intron 35.0%
! CTTGCTATGCAGAACTTTAT+AGG - chr4_2:58032792-58032811 None:intergenic 35.0%
CTATAAAGTTCTGCATAGCA+AGG + chr4_2:58032790-58032809 Msa0610330:three_prime_UTR 35.0%
!!! CTGACCGTCGTATTTTAGTT+TGG - chr4_2:58030886-58030905 None:intergenic 40.0%
AACTAAAATACGACGGTCAG+TGG + chr4_2:58030886-58030905 Msa0610330:five_prime_UTR 40.0%
ACTAAAATACGACGGTCAGT+GGG + chr4_2:58030887-58030906 Msa0610330:five_prime_UTR 40.0%
TGTGTATAACGGTGTTCATG+TGG + chr4_2:58030944-58030963 Msa0610330:CDS 40.0%
ATTCGTCTCTGTTGAGTAAG+AGG - chr4_2:58030996-58031015 None:intergenic 40.0%
!! TGGTTGGCTTCTTCCAAAAA+TGG + chr4_2:58031184-58031203 Msa0610330:CDS 40.0%
TGGCTTCTTCCAAAAATGGT+AGG + chr4_2:58031188-58031207 Msa0610330:CDS 40.0%
! TTTTGGGCTGTGGAATATCT+TGG - chr4_2:58031243-58031262 None:intergenic 40.0%
TCTCCCACTTCGATTTATTC+AGG + chr4_2:58031273-58031292 Msa0610330:CDS 40.0%
!! TGCTTTTGTTATCTTTGGGC+CGG + chr4_2:58031378-58031397 Msa0610330:intron 40.0%
CACTAATGAATGCACATCCA+AGG - chr4_2:58031462-58031481 None:intergenic 40.0%
CTTGGATGTGCATTCATTAG+TGG + chr4_2:58031460-58031479 Msa0610330:intron 40.0%
TGATATTTGCACCTCCTCAA+TGG + chr4_2:58031584-58031603 Msa0610330:CDS 40.0%
GAAGACATAAACCATTGAGG+AGG - chr4_2:58031598-58031617 None:intergenic 40.0%
GTCTTCAATAGGCCAAATCA+TGG + chr4_2:58031612-58031631 Msa0610330:CDS 40.0%
TAGTCAAGACGTGAATTCCA+GGG - chr4_2:58031653-58031672 None:intergenic 40.0%
TTAGTCAAGACGTGAATTCC+AGG - chr4_2:58031654-58031673 None:intergenic 40.0%
!! ATGAAAAGTGCTTGCTACCA+GGG + chr4_2:58031905-58031924 Msa0610330:CDS 40.0%
TGTCGACACACAATTTCCTT+CGG + chr4_2:58031969-58031988 Msa0610330:CDS 40.0%
GGCTTAAGCATGCAAAAAAG+TGG - chr4_2:58032015-58032034 None:intergenic 40.0%
AACATCTGGATCAGAAGCAA+TGG + chr4_2:58032154-58032173 Msa0610330:CDS 40.0%
GAAGCAATGGAAAGAGAACA+TGG + chr4_2:58032167-58032186 Msa0610330:CDS 40.0%
TTACCCTGTTTAGTGAGGAT+TGG + chr4_2:58032357-58032376 Msa0610330:three_prime_UTR 40.0%
GATCCAATCCTCACTAAACA+GGG - chr4_2:58032363-58032382 None:intergenic 40.0%
TGATCCAATCCTCACTAAAC+AGG - chr4_2:58032364-58032383 None:intergenic 40.0%
TTAGTGAGGATTGGATCAGT+TGG + chr4_2:58032366-58032385 Msa0610330:three_prime_UTR 40.0%
CTTAGTCGTGTAGAACATTG+CGG + chr4_2:58032705-58032724 Msa0610330:three_prime_UTR 40.0%
TTAGTCGTGTAGAACATTGC+GGG + chr4_2:58032706-58032725 Msa0610330:three_prime_UTR 40.0%
!!! CTGACCGTCGTATTTTAGTT+TGG - chr4_2:58030886-58030905 None:intergenic 40.0%
AACTAAAATACGACGGTCAG+TGG + chr4_2:58030886-58030905 Msa0610330:five_prime_UTR 40.0%
ACTAAAATACGACGGTCAGT+GGG + chr4_2:58030887-58030906 Msa0610330:five_prime_UTR 40.0%
TGTGTATAACGGTGTTCATG+TGG + chr4_2:58030944-58030963 Msa0610330:CDS 40.0%
ATTCGTCTCTGTTGAGTAAG+AGG - chr4_2:58030996-58031015 None:intergenic 40.0%
!! TGGTTGGCTTCTTCCAAAAA+TGG + chr4_2:58031184-58031203 Msa0610330:CDS 40.0%
TGGCTTCTTCCAAAAATGGT+AGG + chr4_2:58031188-58031207 Msa0610330:CDS 40.0%
! TTTTGGGCTGTGGAATATCT+TGG - chr4_2:58031243-58031262 None:intergenic 40.0%
TCTCCCACTTCGATTTATTC+AGG + chr4_2:58031273-58031292 Msa0610330:CDS 40.0%
!! TGCTTTTGTTATCTTTGGGC+CGG + chr4_2:58031378-58031397 Msa0610330:intron 40.0%
CACTAATGAATGCACATCCA+AGG - chr4_2:58031462-58031481 None:intergenic 40.0%
CTTGGATGTGCATTCATTAG+TGG + chr4_2:58031460-58031479 Msa0610330:intron 40.0%
TGATATTTGCACCTCCTCAA+TGG + chr4_2:58031584-58031603 Msa0610330:CDS 40.0%
GAAGACATAAACCATTGAGG+AGG - chr4_2:58031598-58031617 None:intergenic 40.0%
GTCTTCAATAGGCCAAATCA+TGG + chr4_2:58031612-58031631 Msa0610330:CDS 40.0%
TAGTCAAGACGTGAATTCCA+GGG - chr4_2:58031653-58031672 None:intergenic 40.0%
TTAGTCAAGACGTGAATTCC+AGG - chr4_2:58031654-58031673 None:intergenic 40.0%
!! ATGAAAAGTGCTTGCTACCA+GGG + chr4_2:58031905-58031924 Msa0610330:CDS 40.0%
TGTCGACACACAATTTCCTT+CGG + chr4_2:58031969-58031988 Msa0610330:CDS 40.0%
GGCTTAAGCATGCAAAAAAG+TGG - chr4_2:58032015-58032034 None:intergenic 40.0%
AACATCTGGATCAGAAGCAA+TGG + chr4_2:58032154-58032173 Msa0610330:CDS 40.0%
GAAGCAATGGAAAGAGAACA+TGG + chr4_2:58032167-58032186 Msa0610330:CDS 40.0%
TTACCCTGTTTAGTGAGGAT+TGG + chr4_2:58032357-58032376 Msa0610330:three_prime_UTR 40.0%
GATCCAATCCTCACTAAACA+GGG - chr4_2:58032363-58032382 None:intergenic 40.0%
TGATCCAATCCTCACTAAAC+AGG - chr4_2:58032364-58032383 None:intergenic 40.0%
TTAGTGAGGATTGGATCAGT+TGG + chr4_2:58032366-58032385 Msa0610330:three_prime_UTR 40.0%
CTTAGTCGTGTAGAACATTG+CGG + chr4_2:58032705-58032724 Msa0610330:three_prime_UTR 40.0%
TTAGTCGTGTAGAACATTGC+GGG + chr4_2:58032706-58032725 Msa0610330:three_prime_UTR 40.0%
CTAAAATACGACGGTCAGTG+GGG + chr4_2:58030888-58030907 Msa0610330:five_prime_UTR 45.0%
CTGTTGAGTAAGAGGAGGAA+AGG - chr4_2:58030988-58031007 None:intergenic 45.0%
ACAAAGGCCTACAGAACCAT+TGG + chr4_2:58031105-58031124 Msa0610330:intron 45.0%
TACAGAACCATTGGCATGGT+GGG + chr4_2:58031114-58031133 Msa0610330:CDS 45.0%
ATTCCACAGCCCAAAACTAG+AGG + chr4_2:58031247-58031266 Msa0610330:CDS 45.0%
GGTTATCTTTCTGTTACCCC+TGG + chr4_2:58031633-58031652 Msa0610330:CDS 45.0%
AGTCAAGACGTGAATTCCAG+GGG - chr4_2:58031652-58031671 None:intergenic 45.0%
CGTCTTGACTAATGCACCAT+TGG + chr4_2:58031662-58031681 Msa0610330:CDS 45.0%
CATGTGTATACCTTTGGCCA+AGG - chr4_2:58031693-58031712 None:intergenic 45.0%
! CTTGGCCAAAGGTATACACA+TGG + chr4_2:58031691-58031710 Msa0610330:intron 45.0%
!! GATGAAAAGTGCTTGCTACC+AGG + chr4_2:58031904-58031923 Msa0610330:CDS 45.0%
TTGCATGCTTAAGCCTAACC+TGG + chr4_2:58032020-58032039 Msa0610330:intron 45.0%
GATCAGTGAGACACAGTGAA+TGG + chr4_2:58032200-58032219 Msa0610330:exon 45.0%
! ATTGACAAGGTGCTAGTGAG+TGG - chr4_2:58032289-58032308 None:intergenic 45.0%
TAAACAGGGTAAGACTGGAC+TGG - chr4_2:58032349-58032368 None:intergenic 45.0%
CTCACTAAACAGGGTAAGAC+TGG - chr4_2:58032354-58032373 None:intergenic 45.0%
CAGTCTTACCCTGTTTAGTG+AGG + chr4_2:58032352-58032371 Msa0610330:three_prime_UTR 45.0%
!! GCATGTGCTCATTCTGAAAC+CGG - chr4_2:58032488-58032507 None:intergenic 45.0%
AATGAGCACATGCTCACCTT+GGG + chr4_2:58032495-58032514 Msa0610330:three_prime_UTR 45.0%
ATAAAAGCAAGCTAGCCCCA+AGG - chr4_2:58032514-58032533 None:intergenic 45.0%
CTAAAATACGACGGTCAGTG+GGG + chr4_2:58030888-58030907 Msa0610330:five_prime_UTR 45.0%
CTGTTGAGTAAGAGGAGGAA+AGG - chr4_2:58030988-58031007 None:intergenic 45.0%
ACAAAGGCCTACAGAACCAT+TGG + chr4_2:58031105-58031124 Msa0610330:intron 45.0%
TACAGAACCATTGGCATGGT+GGG + chr4_2:58031114-58031133 Msa0610330:CDS 45.0%
ATTCCACAGCCCAAAACTAG+AGG + chr4_2:58031247-58031266 Msa0610330:CDS 45.0%
GGTTATCTTTCTGTTACCCC+TGG + chr4_2:58031633-58031652 Msa0610330:CDS 45.0%
AGTCAAGACGTGAATTCCAG+GGG - chr4_2:58031652-58031671 None:intergenic 45.0%
CGTCTTGACTAATGCACCAT+TGG + chr4_2:58031662-58031681 Msa0610330:CDS 45.0%
CATGTGTATACCTTTGGCCA+AGG - chr4_2:58031693-58031712 None:intergenic 45.0%
! CTTGGCCAAAGGTATACACA+TGG + chr4_2:58031691-58031710 Msa0610330:intron 45.0%
!! GATGAAAAGTGCTTGCTACC+AGG + chr4_2:58031904-58031923 Msa0610330:CDS 45.0%
TTGCATGCTTAAGCCTAACC+TGG + chr4_2:58032020-58032039 Msa0610330:intron 45.0%
GATCAGTGAGACACAGTGAA+TGG + chr4_2:58032200-58032219 Msa0610330:exon 45.0%
! ATTGACAAGGTGCTAGTGAG+TGG - chr4_2:58032289-58032308 None:intergenic 45.0%
TAAACAGGGTAAGACTGGAC+TGG - chr4_2:58032349-58032368 None:intergenic 45.0%
CTCACTAAACAGGGTAAGAC+TGG - chr4_2:58032354-58032373 None:intergenic 45.0%
CAGTCTTACCCTGTTTAGTG+AGG + chr4_2:58032352-58032371 Msa0610330:three_prime_UTR 45.0%
!! GCATGTGCTCATTCTGAAAC+CGG - chr4_2:58032488-58032507 None:intergenic 45.0%
AATGAGCACATGCTCACCTT+GGG + chr4_2:58032495-58032514 Msa0610330:three_prime_UTR 45.0%
ATAAAAGCAAGCTAGCCCCA+AGG - chr4_2:58032514-58032533 None:intergenic 45.0%
CGTCTCTGTTGAGTAAGAGG+AGG - chr4_2:58030993-58031012 None:intergenic 50.0%
! CACCATGCCAATGGTTCTGT+AGG - chr4_2:58031115-58031134 None:intergenic 50.0%
CTACAGAACCATTGGCATGG+TGG + chr4_2:58031113-58031132 Msa0610330:CDS 50.0%
TGGGACGGCGAAACAATCTT+AGG + chr4_2:58031133-58031152 Msa0610330:CDS 50.0%
GACGGCGAAACAATCTTAGG+CGG + chr4_2:58031136-58031155 Msa0610330:CDS 50.0%
GGCGGTAGAGATATACTCTG+CGG + chr4_2:58031154-58031173 Msa0610330:CDS 50.0%
GCGGTAGAGATATACTCTGC+GGG + chr4_2:58031155-58031174 Msa0610330:CDS 50.0%
CGGTAGAGATATACTCTGCG+GGG + chr4_2:58031156-58031175 Msa0610330:CDS 50.0%
GGTAGAGATATACTCTGCGG+GGG + chr4_2:58031157-58031176 Msa0610330:CDS 50.0%
!!! GGGAGATCGCCTCTAGTTTT+GGG - chr4_2:58031259-58031278 None:intergenic 50.0%
!! TGGGAGATCGCCTCTAGTTT+TGG - chr4_2:58031260-58031279 None:intergenic 50.0%
ATGCACCATTGGATGCTCCT+TGG + chr4_2:58031673-58031692 Msa0610330:CDS 50.0%
!! TTTGGCCAAGGAGCATCCAA+TGG - chr4_2:58031681-58031700 None:intergenic 50.0%
ATTGGATGCTCCTTGGCCAA+AGG + chr4_2:58031680-58031699 Msa0610330:CDS 50.0%
! AATTCTGGAGGACGAATCCC+TGG - chr4_2:58031925-58031944 None:intergenic 50.0%
CGACACACAATTTCCTTCGG+TGG + chr4_2:58031972-58031991 Msa0610330:CDS 50.0%
! GAGGTGCTCCTAGTACCATA+CGG - chr4_2:58032090-58032109 None:intergenic 50.0%
!! CTCATTCTGAAACCGGTGCA+TGG - chr4_2:58032481-58032500 None:intergenic 50.0%
GAATGAGCACATGCTCACCT+TGG + chr4_2:58032494-58032513 Msa0610330:three_prime_UTR 50.0%
ATGAGCACATGCTCACCTTG+GGG + chr4_2:58032496-58032515 Msa0610330:three_prime_UTR 50.0%
CGTCTCTGTTGAGTAAGAGG+AGG - chr4_2:58030993-58031012 None:intergenic 50.0%
! CACCATGCCAATGGTTCTGT+AGG - chr4_2:58031115-58031134 None:intergenic 50.0%
CTACAGAACCATTGGCATGG+TGG + chr4_2:58031113-58031132 Msa0610330:CDS 50.0%
TGGGACGGCGAAACAATCTT+AGG + chr4_2:58031133-58031152 Msa0610330:CDS 50.0%
GACGGCGAAACAATCTTAGG+CGG + chr4_2:58031136-58031155 Msa0610330:CDS 50.0%
GGCGGTAGAGATATACTCTG+CGG + chr4_2:58031154-58031173 Msa0610330:CDS 50.0%
GCGGTAGAGATATACTCTGC+GGG + chr4_2:58031155-58031174 Msa0610330:CDS 50.0%
CGGTAGAGATATACTCTGCG+GGG + chr4_2:58031156-58031175 Msa0610330:CDS 50.0%
GGTAGAGATATACTCTGCGG+GGG + chr4_2:58031157-58031176 Msa0610330:CDS 50.0%
!!! GGGAGATCGCCTCTAGTTTT+GGG - chr4_2:58031259-58031278 None:intergenic 50.0%
!! TGGGAGATCGCCTCTAGTTT+TGG - chr4_2:58031260-58031279 None:intergenic 50.0%
ATGCACCATTGGATGCTCCT+TGG + chr4_2:58031673-58031692 Msa0610330:CDS 50.0%
!! TTTGGCCAAGGAGCATCCAA+TGG - chr4_2:58031681-58031700 None:intergenic 50.0%
ATTGGATGCTCCTTGGCCAA+AGG + chr4_2:58031680-58031699 Msa0610330:CDS 50.0%
! AATTCTGGAGGACGAATCCC+TGG - chr4_2:58031925-58031944 None:intergenic 50.0%
CGACACACAATTTCCTTCGG+TGG + chr4_2:58031972-58031991 Msa0610330:CDS 50.0%
! GAGGTGCTCCTAGTACCATA+CGG - chr4_2:58032090-58032109 None:intergenic 50.0%
!! CTCATTCTGAAACCGGTGCA+TGG - chr4_2:58032481-58032500 None:intergenic 50.0%
GAATGAGCACATGCTCACCT+TGG + chr4_2:58032494-58032513 Msa0610330:three_prime_UTR 50.0%
ATGAGCACATGCTCACCTTG+GGG + chr4_2:58032496-58032515 Msa0610330:three_prime_UTR 50.0%
GGCCTACAGAACCATTGGCA+TGG + chr4_2:58031110-58031129 Msa0610330:intron 55.0%
! GAACCATTGGCATGGTGGGA+CGG + chr4_2:58031118-58031137 Msa0610330:CDS 55.0%
! ATATACTCTGCGGGGGTACG+TGG + chr4_2:58031164-58031183 Msa0610330:CDS 55.0%
!!! TCGCCTCTAGTTTTGGGCTG+TGG - chr4_2:58031253-58031272 None:intergenic 55.0%
CAAGAGTCCCGAGGAGTTTG+CGG + chr4_2:58031509-58031528 Msa0610330:CDS 55.0%
ACTTCCTCCGCAAACTCCTC+GGG - chr4_2:58031519-58031538 None:intergenic 55.0%
CACTTCCTCCGCAAACTCCT+CGG - chr4_2:58031520-58031539 None:intergenic 55.0%
!! TGCGGAGGAAGTGCTCAAAG+AGG + chr4_2:58031527-58031546 Msa0610330:CDS 55.0%
CTTAGGGGCCGTATGGTACT+AGG + chr4_2:58032079-58032098 Msa0610330:intron 55.0%
GTGATACCTGCACCATGCAC+CGG + chr4_2:58032466-58032485 Msa0610330:three_prime_UTR 55.0%
GGCCTACAGAACCATTGGCA+TGG + chr4_2:58031110-58031129 Msa0610330:intron 55.0%
! GAACCATTGGCATGGTGGGA+CGG + chr4_2:58031118-58031137 Msa0610330:CDS 55.0%
! ATATACTCTGCGGGGGTACG+TGG + chr4_2:58031164-58031183 Msa0610330:CDS 55.0%
!!! TCGCCTCTAGTTTTGGGCTG+TGG - chr4_2:58031253-58031272 None:intergenic 55.0%
CAAGAGTCCCGAGGAGTTTG+CGG + chr4_2:58031509-58031528 Msa0610330:CDS 55.0%
ACTTCCTCCGCAAACTCCTC+GGG - chr4_2:58031519-58031538 None:intergenic 55.0%
CACTTCCTCCGCAAACTCCT+CGG - chr4_2:58031520-58031539 None:intergenic 55.0%
!! TGCGGAGGAAGTGCTCAAAG+AGG + chr4_2:58031527-58031546 Msa0610330:CDS 55.0%
CTTAGGGGCCGTATGGTACT+AGG + chr4_2:58032079-58032098 Msa0610330:intron 55.0%
GTGATACCTGCACCATGCAC+CGG + chr4_2:58032466-58032485 Msa0610330:three_prime_UTR 55.0%
ACAGAGCGACAAGAGTCCCG+AGG + chr4_2:58031500-58031519 Msa0610330:intron 60.0%
GCTTGTGCTTAGGGGCCGTA+TGG + chr4_2:58032072-58032091 Msa0610330:intron 60.0%
CTGAAACCGGTGCATGGTGC+AGG - chr4_2:58032475-58032494 None:intergenic 60.0%
ACAGAGCGACAAGAGTCCCG+AGG + chr4_2:58031500-58031519 Msa0610330:intron 60.0%
GCTTGTGCTTAGGGGCCGTA+TGG + chr4_2:58032072-58032091 Msa0610330:intron 60.0%
CTGAAACCGGTGCATGGTGC+AGG - chr4_2:58032475-58032494 None:intergenic 60.0%
TCGCCGTCCCACCATGCCAA+TGG - chr4_2:58031124-58031143 None:intergenic 65.0%
! ACTCTGCGGGGGTACGTGGT+TGG + chr4_2:58031168-58031187 Msa0610330:CDS 65.0%
GAGTCCCGAGGAGTTTGCGG+AGG + chr4_2:58031512-58031531 Msa0610330:CDS 65.0%
TCGCCGTCCCACCATGCCAA+TGG - chr4_2:58031124-58031143 None:intergenic 65.0%
! ACTCTGCGGGGGTACGTGGT+TGG + chr4_2:58031168-58031187 Msa0610330:CDS 65.0%
GAGTCCCGAGGAGTTTGCGG+AGG + chr4_2:58031512-58031531 Msa0610330:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 58030865 58032820 58030865 ID=Msa0610330;Name=Msa0610330
chr4_2 mRNA 58030865 58032820 58030865 ID=Msa0610330-mRNA-1;Parent=Msa0610330;Name=Msa0610330-mRNA-1;_AED=0.11;_eAED=0.11;_QI=78|1|1|1|0.8|0.66|6|580|265
chr4_2 exon 58030865 58031025 58030865 ID=Msa0610330-mRNA-1:exon:15176;Parent=Msa0610330-mRNA-1
chr4_2 exon 58031111 58031294 58031111 ID=Msa0610330-mRNA-1:exon:15177;Parent=Msa0610330-mRNA-1
chr4_2 exon 58031504 58031701 58031504 ID=Msa0610330-mRNA-1:exon:15178;Parent=Msa0610330-mRNA-1
chr4_2 exon 58031796 58031993 58031796 ID=Msa0610330-mRNA-1:exon:15179;Parent=Msa0610330-mRNA-1
chr4_2 exon 58032084 58032727 58032084 ID=Msa0610330-mRNA-1:exon:15180;Parent=Msa0610330-mRNA-1
chr4_2 exon 58032750 58032820 58032750 ID=Msa0610330-mRNA-1:exon:15181;Parent=Msa0610330-mRNA-1
chr4_2 five_prime_UTR 58030865 58030942 58030865 ID=Msa0610330-mRNA-1:five_prime_utr;Parent=Msa0610330-mRNA-1
chr4_2 CDS 58030943 58031025 58030943 ID=Msa0610330-mRNA-1:cds;Parent=Msa0610330-mRNA-1
chr4_2 CDS 58031111 58031294 58031111 ID=Msa0610330-mRNA-1:cds;Parent=Msa0610330-mRNA-1
chr4_2 CDS 58031504 58031701 58031504 ID=Msa0610330-mRNA-1:cds;Parent=Msa0610330-mRNA-1
chr4_2 CDS 58031796 58031993 58031796 ID=Msa0610330-mRNA-1:cds;Parent=Msa0610330-mRNA-1
chr4_2 CDS 58032084 58032218 58032084 ID=Msa0610330-mRNA-1:cds;Parent=Msa0610330-mRNA-1
chr4_2 three_prime_UTR 58032219 58032727 58032219 ID=Msa0610330-mRNA-1:three_prime_utr;Parent=Msa0610330-mRNA-1
chr4_2 three_prime_UTR 58032750 58032820 58032750 ID=Msa0610330-mRNA-1:three_prime_utr;Parent=Msa0610330-mRNA-1
Gene Sequence

>Msa0610330

ATGTGTATAACGGTGTTCATGTGGCAAGCTCATCCGAAATATCCTTTCCTCCTCTTACTCAACAGAGACGAATTTCATTCTCGGCCTACAGAACCATTGGCATGGTGGGACGGCGAAACAATCTTAGGCGGTAGAGATATACTCTGCGGGGGTACGTGGTTGGCTTCTTCCAAAAATGGTAGGTTAGCTTTTCTCACCAATTTTAGAGAACTCCAAGATATTCCACAGCCCAAAACTAGAGGCGATCTCCCACTTCGATTTATTCAGAGCGACAAGAGTCCCGAGGAGTTTGCGGAGGAAGTGCTCAAAGAGGCTCATCTATACAACGGTTTCAACCTTGTATTAGCTGATATTTGCACCTCCTCAATGGTTTATGTCTTCAATAGGCCAAATCATGGTTATCTTTCTGTTACCCCTGGAATTCACGTCTTGACTAATGCACCATTGGATGCTCCTTGGCCAAAGGCTGAACGGTTGCGCCATAGTTTCAAAGAGCTTATTGATGAGTATGGTGAACGTGAATTTCCTATAAAAGAAATGGTTGAGAAACTAATGACAAACACAGTTAAAGATGATGAAAAGTGCTTGCTACCAGGGATTCGTCCTCCAGAATTTGAATTTCCTTTGAGTTCGATATTTGTCGACACACAATTTCCTTCGGTGGGGCCGTATGGTACTAGGAGCACCTCTGCTTTGTTTGTTACATCAAACAAAAAAGTCACATTCTATGAGAAACATCTGGATCAGAAGCAATGGAAAGAGAACATGGTAACTTATCAGATCAGTGAGACACAGTGA
Protein sequence

>Msa0610330

MCITVFMWQAHPKYPFLLLLNRDEFHSRPTEPLAWWDGETILGGRDILCGGTWLASSKNGRLAFLTNFRELQDIPQPKTRGDLPLRFIQSDKSPEEFAEEVLKEAHLYNGFNLVLADICTSSMVYVFNRPNHGYLSVTPGIHVLTNAPLDAPWPKAERLRHSFKELIDEYGEREFPIKEMVEKLMTNTVKDDEKCLLPGIRPPEFEFPLSSIFVDTQFPSVGPYGTRSTSALFVTSNKKVTFYEKHLDQKQWKENMVTYQISETQ*