Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0652090 | XP_003608060.1 | 93.665 | 663 | 26 | 5 | 1 | 657 | 1 | 653 | 0.0 | 1131 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0652090 | sp|Q8L3P4|THAL_ARATH | 42.158 | 695 | 321 | 19 | 1 | 655 | 1 | 654 | 2.05e-121 | 378 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0652090 | G7JNK9 | 93.665 | 663 | 26 | 5 | 1 | 657 | 1 | 653 | 0.0 | 1131 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0072570 | Msa0652090 | 0.811851 | 5.693093e-51 | -8.615850e-47 |
| Msa0652090 | Msa0694650 | 0.996695 | 6.094314e-231 | -8.615850e-47 |
| Msa0652090 | Msa1054280 | 0.826734 | 2.305771e-54 | -8.615850e-47 |
| Msa0652090 | Msa1082170 | 0.808764 | 2.638251e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0652090 | MtrunA17_Chr4g0045541 | 93.665 | 663 | 26 | 5 | 1 | 657 | 1 | 653 | 0.0 | 1131 |
| Msa0652090 | MtrunA17_Chr5g0447351 | 61.826 | 241 | 63 | 4 | 423 | 657 | 12 | 229 | 3.73e-81 | 256 |
| Msa0652090 | MtrunA17_Chr3g0132641 | 31.193 | 109 | 74 | 1 | 224 | 332 | 16 | 123 | 8.01e-14 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0652090 | AT2G43650.1 | 42.158 | 695 | 321 | 19 | 1 | 655 | 1 | 654 | 2.09e-122 | 378 |
| Msa0652090 | AT3G28230.2 | 55.556 | 117 | 49 | 2 | 541 | 657 | 61 | 174 | 1.83e-27 | 109 |
| Msa0652090 | AT3G28230.1 | 55.556 | 117 | 49 | 2 | 541 | 657 | 60 | 173 | 2.06e-27 | 109 |
| Msa0652090 | AT1G07840.2 | 26.119 | 134 | 99 | 0 | 213 | 346 | 4 | 137 | 2.88e-15 | 77.8 |
| Msa0652090 | AT1G07840.1 | 26.119 | 134 | 99 | 0 | 213 | 346 | 4 | 137 | 2.88e-15 | 77.8 |
| Msa0652090 | AT1G07840.3 | 26.119 | 134 | 99 | 0 | 213 | 346 | 4 | 137 | 3.86e-15 | 76.6 |
Find 168 sgRNAs with CRISPR-Local
Find 568 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGCAGTTGGGAGGGGTATT+AGG | 0.124811 | 4_3:-59792280 | None:intergenic |
| ATCTCTTGTGAAGGTTAAAA+AGG | 0.178594 | 4_3:+59795734 | Msa0652090:intron |
| CAATTTCTTCCTCTTCCTTT+GGG | 0.184787 | 4_3:-59793530 | None:intergenic |
| AACATCTTTGGCATATTAAA+TGG | 0.208397 | 4_3:+59800445 | Msa0652090:three_prime_UTR |
| GACAACCAATCAACTAATTC+TGG | 0.211578 | 4_3:-59794954 | None:intergenic |
| GTATTAGGGTTTATGAATTA+TGG | 0.213123 | 4_3:-59792265 | None:intergenic |
| GGCAAGGAGAAGGGCTTTAT+TGG | 0.240030 | 4_3:+59792916 | Msa0652090:CDS |
| GATGATGCTGTGGTTGTTAA+TGG | 0.242057 | 4_3:+59798096 | Msa0652090:CDS |
| GCAATTTCTTCCTCTTCCTT+TGG | 0.261826 | 4_3:-59793531 | None:intergenic |
| AACCTCATCACCTGCTTAGA+TGG | 0.265694 | 4_3:+59800388 | Msa0652090:three_prime_UTR |
| AGCACCTTGTAGTTCTTTCT+AGG | 0.266803 | 4_3:-59800080 | None:intergenic |
| CGCAGTTGGGAGGGGTATTA+GGG | 0.269025 | 4_3:-59792279 | None:intergenic |
| GGACTTGAGTAGAAGGTAAA+AGG | 0.290210 | 4_3:-59795835 | None:intergenic |
| GATTGGAAACTTAACATCTT+TGG | 0.300947 | 4_3:+59800433 | Msa0652090:three_prime_UTR |
| CTGTCCCTTGCGATTCTTAA+CGG | 0.332149 | 4_3:-59800219 | None:intergenic |
| GTAAAATACCCGAGAGAAAC+TGG | 0.341689 | 4_3:+59792181 | None:intergenic |
| TCTTCAAGGCGAGCTATTAC+AGG | 0.346861 | 4_3:-59795882 | None:intergenic |
| TCACGAATAGCGTCTCTCTT+AGG | 0.351316 | 4_3:-59799556 | None:intergenic |
| GATCAAGGAATTAATGAATC+AGG | 0.364978 | 4_3:+59795905 | Msa0652090:CDS |
| ATCACTACCACTGCTTCTTC+TGG | 0.366961 | 4_3:-59797555 | None:intergenic |
| TCCCCGCCATAAGGTGCATT+TGG | 0.375526 | 4_3:-59800260 | None:intergenic |
| TCAGTCGAAGTATCAGATTC+AGG | 0.375688 | 4_3:+59800306 | Msa0652090:CDS |
| TTAATTCCTTGATCTCTTCA+AGG | 0.381679 | 4_3:-59795896 | None:intergenic |
| TAACTTGTATAATTATTGAT+TGG | 0.392558 | 4_3:+59800416 | Msa0652090:three_prime_UTR |
| AGAATGTCCTCAAGTTCAAC+TGG | 0.400387 | 4_3:-59797420 | None:intergenic |
| AGAAGGCCAAATGCACCTTA+TGG | 0.411416 | 4_3:+59800254 | Msa0652090:CDS |
| ATGATGCTGTGGTTGTTAAT+GGG | 0.413234 | 4_3:+59798097 | Msa0652090:CDS |
| GCCCTTCGGACTTGAGTAGA+AGG | 0.421509 | 4_3:-59795842 | None:intergenic |
| GCTACAGACTTCACTGCTCT+TGG | 0.442289 | 4_3:-59792217 | None:intergenic |
| CTGCCCCAGAATTAGTTGAT+TGG | 0.442694 | 4_3:+59794949 | Msa0652090:CDS |
| GTTGGAAGAAAGCACCGATA+TGG | 0.444169 | 4_3:+59793341 | Msa0652090:CDS |
| GCGATAGAATCGGCTGGCAT+TGG | 0.444797 | 4_3:-59797495 | None:intergenic |
| TTTCCGTCCACAGTCTCCTC+TGG | 0.445026 | 4_3:-59799898 | None:intergenic |
| TCACATTGGCGTGCAGAGTT+CGG | 0.445495 | 4_3:+59797853 | Msa0652090:CDS |
| AAGCGTTCGAGACCAGCTAA+TGG | 0.448914 | 4_3:+59797965 | Msa0652090:CDS |
| TGACCTACTCAACCTCTTCA+AGG | 0.452976 | 4_3:+59799776 | Msa0652090:CDS |
| GACGGCGGCGCAGTTGGGAG+GGG | 0.453532 | 4_3:-59792287 | None:intergenic |
| AAAGTTATAACGGTCGCGTC+GGG | 0.455333 | 4_3:-59792487 | None:intergenic |
| AAAGGTTATAGCTTGGCAAT+AGG | 0.455660 | 4_3:-59795817 | None:intergenic |
| CTTTCGTCTTCTTCAACCTC+CGG | 0.457947 | 4_3:+59792340 | Msa0652090:five_prime_UTR |
| TACGATTATCAGCACCATAT+CGG | 0.458890 | 4_3:-59793355 | None:intergenic |
| CGTAAGACGGCGGCGCAGTT+GGG | 0.459054 | 4_3:-59792292 | None:intergenic |
| TACCCGAGAGAAACTGGTTC+GGG | 0.462506 | 4_3:+59792187 | None:intergenic |
| GTTTGGTTTGTTTAGTAATG+AGG | 0.465212 | 4_3:+59793231 | Msa0652090:intron |
| AGGAAGAAAAGTAAAAGATC+AGG | 0.465275 | 4_3:+59797729 | Msa0652090:CDS |
| ACAACCAATCAACTAATTCT+GGG | 0.466223 | 4_3:-59794953 | None:intergenic |
| GGCCAAATGCACCTTATGGC+GGG | 0.470614 | 4_3:+59800258 | Msa0652090:CDS |
| ATAACCTTATCATTGAAAAC+AGG | 0.475949 | 4_3:-59792713 | None:intergenic |
| TGATGATGGTGATGATCAAA+TGG | 0.479990 | 4_3:+59799642 | Msa0652090:CDS |
| GTGGTTGTTAATGGGCCAGC+TGG | 0.481470 | 4_3:+59798105 | Msa0652090:CDS |
| AGCTGCAAAACGCTCTGCAA+AGG | 0.485631 | 4_3:+59799750 | Msa0652090:CDS |
| TTCATCTCAACTACATTGCT+AGG | 0.486326 | 4_3:-59797673 | None:intergenic |
| AGCGTTCGAGACCAGCTAAT+GGG | 0.494581 | 4_3:+59797966 | Msa0652090:CDS |
| AGCTCGCCTTGAAGAGATCA+AGG | 0.498098 | 4_3:+59795890 | Msa0652090:CDS |
| ATGATCGACTTGCTGCCCTT+CGG | 0.498169 | 4_3:-59795856 | None:intergenic |
| CCAGTGGATTCCCCGCCATA+AGG | 0.499092 | 4_3:-59800269 | None:intergenic |
| CCTTATGGCGGGGAATCCAC+TGG | 0.499825 | 4_3:+59800269 | Msa0652090:CDS |
| ACGTAAGACGGCGGCGCAGT+TGG | 0.500239 | 4_3:-59792293 | None:intergenic |
| TATGAATTATGGAGATAACT+AGG | 0.501868 | 4_3:-59792254 | None:intergenic |
| TTCAGATTAGCATTAACAAA+CGG | 0.507994 | 4_3:-59798150 | None:intergenic |
| TTCGTTTATAGCGATAGAAT+CGG | 0.508160 | 4_3:-59797505 | None:intergenic |
| AGACGGCGGCGCAGTTGGGA+GGG | 0.508923 | 4_3:-59792288 | None:intergenic |
| AGCAAATGAACGTTCTGTAT+AGG | 0.509672 | 4_3:+59793833 | Msa0652090:CDS |
| CGTTAAGAATCGCAAGGGAC+AGG | 0.510804 | 4_3:+59800220 | Msa0652090:CDS |
| GGCATATTAAATGGTTGTCA+AGG | 0.510871 | 4_3:+59800454 | Msa0652090:three_prime_UTR |
| CAGGTGATGAGGTTCAAAAT+TGG | 0.511895 | 4_3:-59800379 | None:intergenic |
| AATTGCAATAAAAGAACAAA+GGG | 0.514657 | 4_3:+59793548 | Msa0652090:CDS |
| AAGACGGCGGCGCAGTTGGG+AGG | 0.515511 | 4_3:-59792289 | None:intergenic |
| ATACCCGAGAGAAACTGGTT+CGG | 0.516975 | 4_3:+59792186 | None:intergenic |
| AATTTCTTCCTCTTCCTTTG+GGG | 0.517199 | 4_3:-59793529 | None:intergenic |
| GTGATGAGGTTCAAAATTGG+TGG | 0.517459 | 4_3:-59800376 | None:intergenic |
| AAAGCGCTATATCACTTCTC+AGG | 0.520939 | 4_3:+59799918 | Msa0652090:CDS |
| ACCTCATCACCTGCTTAGAT+GGG | 0.523545 | 4_3:+59800389 | Msa0652090:three_prime_UTR |
| ACAGTCTCCTCTGGCAAAGA+GGG | 0.525110 | 4_3:-59799889 | None:intergenic |
| CCTCCTCATCTTGAGATACA+AGG | 0.527251 | 4_3:-59799669 | None:intergenic |
| TAATACAGAATGGCGAAGAA+AGG | 0.532238 | 4_3:+59792417 | Msa0652090:exon |
| TACCTTCTACTCAAGTCCGA+AGG | 0.535029 | 4_3:+59795840 | Msa0652090:CDS |
| AGACGCTATTCGTGAACGAC+GGG | 0.535065 | 4_3:+59799564 | Msa0652090:CDS |
| TGAATATGATGGCAAGGAGA+AGG | 0.537122 | 4_3:+59792906 | Msa0652090:CDS |
| AAGACATGAGAAGCGGGTGA+TGG | 0.538557 | 4_3:+59799588 | Msa0652090:CDS |
| GAAGGTAAAAGGTTATAGCT+TGG | 0.545484 | 4_3:-59795824 | None:intergenic |
| CAGGGGAGTGCAACGTAAGA+CGG | 0.545771 | 4_3:-59792305 | None:intergenic |
| GTGAAGCTATACCCATTAGC+TGG | 0.546075 | 4_3:-59797977 | None:intergenic |
| TGACGAGGCCCCAAAGGAAG+AGG | 0.547359 | 4_3:+59793521 | Msa0652090:CDS |
| TATAAACGAAGAACAGCCTC+TGG | 0.547574 | 4_3:+59797518 | Msa0652090:CDS |
| GGTATTAAGAAAACTATCGT+TGG | 0.551126 | 4_3:+59793323 | Msa0652090:CDS |
| TGAGGAGGACATTGAAAGTG+GGG | 0.551266 | 4_3:+59799684 | Msa0652090:CDS |
| TCCAAAATTTCACCTTGAAG+AGG | 0.553082 | 4_3:-59799788 | None:intergenic |
| TCACCTTGAAGAGGTTGAGT+AGG | 0.554310 | 4_3:-59799779 | None:intergenic |
| CACAGTCTCCTCTGGCAAAG+AGG | 0.555482 | 4_3:-59799890 | None:intergenic |
| AGTTACACGCCCATCTAAGC+AGG | 0.558570 | 4_3:-59800398 | None:intergenic |
| GATAGTTGCATTAATTCCAG+TGG | 0.559627 | 4_3:-59800285 | None:intergenic |
| TAGAACGATATTGTAACGTA+AGG | 0.560055 | 4_3:-59800348 | None:intergenic |
| GAATCAGCATTAATGTCAAG+TGG | 0.560264 | 4_3:-59792662 | None:intergenic |
| CTTCAGTGGAAAAGTTATAA+CGG | 0.561135 | 4_3:-59792497 | None:intergenic |
| CAAGATGAAGAAGACGATGA+AGG | 0.563625 | 4_3:+59793302 | Msa0652090:CDS |
| GATGAGGAGGACATTGAAAG+TGG | 0.563927 | 4_3:+59799682 | Msa0652090:CDS |
| CTCTTTGCCAGAGGAGACTG+TGG | 0.565226 | 4_3:+59799891 | Msa0652090:CDS |
| AAGCGGGTGATGGATGGTGC+TGG | 0.566712 | 4_3:+59799598 | Msa0652090:CDS |
| CATTATCTTCGTCTTCCACA+AGG | 0.570008 | 4_3:-59793605 | None:intergenic |
| GAATATGATGGCAAGGAGAA+GGG | 0.570082 | 4_3:+59792907 | Msa0652090:CDS |
| TGAACTTCCAGTTGAACTTG+AGG | 0.572238 | 4_3:+59797413 | Msa0652090:CDS |
| ATTGAGGATGATAATGATGA+TGG | 0.574706 | 4_3:+59799628 | Msa0652090:CDS |
| ATTCGCAGTTCATAAGCAGA+GGG | 0.581409 | 4_3:+59792631 | Msa0652090:intron |
| GGATCTGAGTGCTTTGTCAA+AGG | 0.583517 | 4_3:+59793807 | Msa0652090:CDS |
| TTACTTGAGACAAGACCAGC+TGG | 0.585973 | 4_3:-59798120 | None:intergenic |
| TAATGTAACTTTCAATGTCG+AGG | 0.587478 | 4_3:+59793786 | Msa0652090:CDS |
| ATGAGGAGGACATTGAAAGT+GGG | 0.587619 | 4_3:+59799683 | Msa0652090:CDS |
| TCAGAATAGAGAGCAAATAC+CGG | 0.589160 | 4_3:-59792359 | None:intergenic |
| AAGTGATGACGAGGCCCCAA+AGG | 0.591250 | 4_3:+59793515 | Msa0652090:CDS |
| TTTATAGCGATAGAATCGGC+TGG | 0.591664 | 4_3:-59797501 | None:intergenic |
| AATCATCATATGTTGCAAGC+TGG | 0.591742 | 4_3:-59798071 | None:intergenic |
| ACCTTCTACTCAAGTCCGAA+GGG | 0.592215 | 4_3:+59795841 | Msa0652090:CDS |
| CTCGTCGTCCATGTCTTCAG+TGG | 0.594619 | 4_3:-59792511 | None:intergenic |
| ACGGGAAAGACATGAGAAGC+GGG | 0.595279 | 4_3:+59799582 | Msa0652090:CDS |
| AAATCAGATTCCTTAAAGGA+TGG | 0.597906 | 4_3:+59797697 | Msa0652090:CDS |
| GGATGATGAATATGATGGCA+AGG | 0.599227 | 4_3:+59792900 | Msa0652090:CDS |
| AGTACTATTCAAGATTTCGC+CGG | 0.601307 | 4_3:+59792385 | Msa0652090:five_prime_UTR |
| GCCAAATGCACCTTATGGCG+GGG | 0.602795 | 4_3:+59800259 | Msa0652090:CDS |
| AAATATTTGAAGTCGTTGCA+TGG | 0.603177 | 4_3:+59793260 | Msa0652090:CDS |
| GATTCGCAGTTCATAAGCAG+AGG | 0.607779 | 4_3:+59792630 | Msa0652090:intron |
| TACAGAATGGCGAAGAAAGG+AGG | 0.608179 | 4_3:+59792420 | Msa0652090:exon |
| ACGAAAGTGAGAAGTAACGC+AGG | 0.610501 | 4_3:-59792324 | None:intergenic |
| CGAAAGTGAGAAGTAACGCA+GGG | 0.611777 | 4_3:-59792323 | None:intergenic |
| TTGCCAGAGGAGACTGTGGA+CGG | 0.612436 | 4_3:+59799895 | Msa0652090:CDS |
| CATGAGAAGCGGGTGATGGA+TGG | 0.612446 | 4_3:+59799592 | Msa0652090:CDS |
| TGCTAATCTGAAGAAACTCA+AGG | 0.616115 | 4_3:+59798161 | Msa0652090:CDS |
| GACAGGTTCAGAGTATCAGA+AGG | 0.617166 | 4_3:+59800237 | Msa0652090:CDS |
| AAATTGCAATAAAAGAACAA+AGG | 0.617287 | 4_3:+59793547 | Msa0652090:CDS |
| CCTTGTATCTCAAGATGAGG+AGG | 0.619208 | 4_3:+59799669 | Msa0652090:CDS |
| TGATGAGGACGGCGACGAGG+AGG | 0.619817 | 4_3:+59792861 | Msa0652090:CDS |
| AAAAGTTATAACGGTCGCGT+CGG | 0.620460 | 4_3:-59792488 | None:intergenic |
| AGGCCAAATGCACCTTATGG+CGG | 0.622008 | 4_3:+59800257 | Msa0652090:CDS |
| AAAAGCCGTTAAGAATCGCA+AGG | 0.624113 | 4_3:+59800214 | Msa0652090:CDS |
| AGCTGTCCCCTCTTTGCCAG+AGG | 0.625555 | 4_3:+59799882 | Msa0652090:CDS |
| GGGGAAATAGTTATGGAAGG+AGG | 0.627308 | 4_3:+59795756 | Msa0652090:CDS |
| TAACTAGGTTGCTGTGTGCG+AGG | 0.627819 | 4_3:-59792239 | None:intergenic |
| GACGAGGATGATGAATATGA+TGG | 0.633701 | 4_3:+59792895 | Msa0652090:CDS |
| CACTGATGAGGACGGCGACG+AGG | 0.635380 | 4_3:+59792858 | Msa0652090:CDS |
| AGAATGGCGAAGAAAGGAGG+AGG | 0.635908 | 4_3:+59792423 | Msa0652090:exon |
| GCCCATCTAAGCAGGTGATG+AGG | 0.636843 | 4_3:-59800390 | None:intergenic |
| GACGGGAAAGACATGAGAAG+CGG | 0.637750 | 4_3:+59799581 | Msa0652090:CDS |
| TCTGAGTGCTTTGTCAAAGG+AGG | 0.637865 | 4_3:+59793810 | Msa0652090:CDS |
| CAACCAATCAACTAATTCTG+GGG | 0.649259 | 4_3:-59794952 | None:intergenic |
| CAGTCTCCTCTGGCAAAGAG+GGG | 0.652096 | 4_3:-59799888 | None:intergenic |
| AAAAGTTAGAGCTTCCCTTG+AGG | 0.652712 | 4_3:+59797883 | Msa0652090:CDS |
| TGACCTTGTATCTCAAGATG+AGG | 0.653742 | 4_3:+59799666 | Msa0652090:CDS |
| CTGTAGATGTCGAAGAACAG+AGG | 0.656488 | 4_3:+59800023 | Msa0652090:intron |
| GAGGAGGACATTGAAAGTGG+GGG | 0.657844 | 4_3:+59799685 | Msa0652090:CDS |
| GAGACGCTATTCGTGAACGA+CGG | 0.665395 | 4_3:+59799563 | Msa0652090:CDS |
| GAATAGAGAGCAAATACCGG+AGG | 0.665723 | 4_3:-59792356 | None:intergenic |
| GAAAGCAAAACAATATACAG+AGG | 0.665792 | 4_3:+59793572 | Msa0652090:CDS |
| GAATCCTAGAAAGAACTACA+AGG | 0.667921 | 4_3:+59800076 | Msa0652090:CDS |
| TTGCATGGTGGAGATGAAGA+CGG | 0.669329 | 4_3:+59793275 | Msa0652090:CDS |
| TGAATCACCAGAAGAAGCAG+TGG | 0.672149 | 4_3:+59797548 | Msa0652090:CDS |
| AAAGCCGTTAAGAATCGCAA+GGG | 0.675175 | 4_3:+59800215 | Msa0652090:CDS |
| ACTAACTCGTAGTCGCAACA+AGG | 0.675677 | 4_3:+59800046 | Msa0652090:CDS |
| GGTGATTCAGCAGAGACCAG+AGG | 0.679046 | 4_3:-59797534 | None:intergenic |
| ACATGGCAGAAGGATCACAT+TGG | 0.681753 | 4_3:+59797839 | Msa0652090:intron |
| GGAGGAAGACGATGATGACG+AGG | 0.686645 | 4_3:+59792879 | Msa0652090:CDS |
| TGGTGCTGGAGTTACAATTG+AGG | 0.686836 | 4_3:+59799612 | Msa0652090:CDS |
| TATTTGAAGTCGTTGCATGG+TGG | 0.689833 | 4_3:+59793263 | Msa0652090:CDS |
| GCTACAATCAAGTGATGACG+AGG | 0.691085 | 4_3:+59793506 | Msa0652090:intron |
| TGATAATGATGACACTGATG+AGG | 0.699842 | 4_3:+59792846 | Msa0652090:CDS |
| AATGATGACACTGATGAGGA+CGG | 0.705449 | 4_3:+59792850 | Msa0652090:CDS |
| GGGAGTGCAACGTAAGACGG+CGG | 0.709406 | 4_3:-59792302 | None:intergenic |
| GAAAGTGAGAAGTAACGCAG+GGG | 0.721608 | 4_3:-59792322 | None:intergenic |
| TTGGTTGTCAGAATTAAACG+AGG | 0.733976 | 4_3:+59794968 | Msa0652090:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTAAATTAAATCATAAAAT+AGG | - | chr4_3:59795522-59795541 | None:intergenic | 10.0% |
| !! | TCTAAATTAAATCATAAAAT+AGG | - | chr4_3:59795522-59795541 | None:intergenic | 10.0% |
| !! | AAATAAGACATAAATATATA+AGG | - | chr4_3:59797596-59797615 | None:intergenic | 10.0% |
| !!! | ATAATCAAATTTTAATCATC+AGG | - | chr4_3:59792563-59792582 | None:intergenic | 15.0% |
| !! | TAAAAAAACAAAATCAGATT+TGG | - | chr4_3:59792746-59792765 | None:intergenic | 15.0% |
| !!! | TAATGAGAAATTAACTTTTA+AGG | + | chr4_3:59793623-59793642 | Msa0652090:CDS | 15.0% |
| !!! | GTAATCTTTTATATTTTTAC+AGG | + | chr4_3:59793753-59793772 | Msa0652090:intron | 15.0% |
| !!! | TTTTCTTTTTCAATCAATTT+TGG | - | chr4_3:59794285-59794304 | None:intergenic | 15.0% |
| !! | ATAACATATTAAGAAACTAT+GGG | + | chr4_3:59796232-59796251 | Msa0652090:intron | 15.0% |
| !!! | TTTTTTTTATATCATAGCAT+TGG | + | chr4_3:59796264-59796283 | Msa0652090:intron | 15.0% |
| !! | AATTCATTAATGAAATAAAC+TGG | + | chr4_3:59797025-59797044 | Msa0652090:intron | 15.0% |
| !!! | ATTTTATTTATCGTTGTAAA+AGG | + | chr4_3:59797791-59797810 | Msa0652090:intron | 15.0% |
| !! | TAATGGTGTAAATTAAAATT+TGG | - | chr4_3:59799075-59799094 | None:intergenic | 15.0% |
| !!! | TAACTTGTATAATTATTGAT+TGG | + | chr4_3:59800416-59800435 | Msa0652090:three_prime_UTR | 15.0% |
| !!! | CATTTTGAAACAAATTTTTT+TGG | - | chr4_3:59800557-59800576 | None:intergenic | 15.0% |
| !!! | GATTTTTTTTTTCTGTTTAC+AGG | + | chr4_3:59792819-59792838 | Msa0652090:intron | 20.0% |
| !!! | TTAATTTCCTTTGTTACTTT+TGG | + | chr4_3:59793156-59793175 | Msa0652090:intron | 20.0% |
| !! | TAAAGTCGAATTTATTCAAA+AGG | + | chr4_3:59793186-59793205 | Msa0652090:intron | 20.0% |
| !! | TTCTGATAAATATACATGTT+TGG | + | chr4_3:59793214-59793233 | Msa0652090:intron | 20.0% |
| !! | TTTGAGCATAATATTTGTAA+AGG | + | chr4_3:59793393-59793412 | Msa0652090:intron | 20.0% |
| !!! | AATGTTTTAGATATTACACA+CGG | - | chr4_3:59793425-59793444 | None:intergenic | 20.0% |
| !! | AGAGAAACAATAAAAAGTAA+GGG | - | chr4_3:59793460-59793479 | None:intergenic | 20.0% |
| !! | AAGAGAAACAATAAAAAGTA+AGG | - | chr4_3:59793461-59793480 | None:intergenic | 20.0% |
| !! | AAATTGCAATAAAAGAACAA+AGG | + | chr4_3:59793547-59793566 | Msa0652090:CDS | 20.0% |
| !! | AATTGCAATAAAAGAACAAA+GGG | + | chr4_3:59793548-59793567 | Msa0652090:CDS | 20.0% |
| !!! | TCATTTTTTCAGTTTCAATT+TGG | - | chr4_3:59794031-59794050 | None:intergenic | 20.0% |
| !!! | TCTAAAATTCAAAGTTGTTT+AGG | - | chr4_3:59794064-59794083 | None:intergenic | 20.0% |
| !!! | TAAACAACTTTGAATTTTAG+AGG | + | chr4_3:59794063-59794082 | Msa0652090:intron | 20.0% |
| !! | TGTATATACTCAAGATATTA+AGG | + | chr4_3:59794203-59794222 | Msa0652090:intron | 20.0% |
| !!! | GTCATTTCTAATCATTTTTT+CGG | - | chr4_3:59794259-59794278 | None:intergenic | 20.0% |
| !! | AAAAAGAAAAGAATGTAAGA+AGG | + | chr4_3:59794295-59794314 | Msa0652090:intron | 20.0% |
| !!! | ATAATTTTCATTTTGTGAAG+CGG | + | chr4_3:59794501-59794520 | Msa0652090:intron | 20.0% |
| !! | AATTCAGCATAGAAAAATAT+GGG | - | chr4_3:59794846-59794865 | None:intergenic | 20.0% |
| !! | AAAAGAAAACTATTGTCTAT+AGG | - | chr4_3:59795642-59795661 | None:intergenic | 20.0% |
| !! | TTATTTATGTTGTTCTACTT+GGG | + | chr4_3:59795671-59795690 | Msa0652090:intron | 20.0% |
| !! | TAAATTGTAACACAACAATA+TGG | - | chr4_3:59795710-59795729 | None:intergenic | 20.0% |
| !! | CATAACATATTAAGAAACTA+TGG | + | chr4_3:59796231-59796250 | Msa0652090:intron | 20.0% |
| !!! | TTTTTAACTTTTTTGTACTG+TGG | + | chr4_3:59796914-59796933 | Msa0652090:intron | 20.0% |
| !!! | TAATTTTACAGTATTATTGC+CGG | + | chr4_3:59797080-59797099 | Msa0652090:intron | 20.0% |
| !! | AATGGTTCAACTTAATTTAT+TGG | + | chr4_3:59797127-59797146 | Msa0652090:intron | 20.0% |
| !!! | TAACTAAGCAATTTTAACAT+TGG | - | chr4_3:59797266-59797285 | None:intergenic | 20.0% |
| !!! | TTTGATATTTCTATGCAATT+AGG | - | chr4_3:59797315-59797334 | None:intergenic | 20.0% |
| !! | GGTGTATTTAGAAAAATTTA+AGG | + | chr4_3:59798942-59798961 | Msa0652090:intron | 20.0% |
| !!! | ATATCTTATTTCTAAGAACT+TGG | - | chr4_3:59799041-59799060 | None:intergenic | 20.0% |
| !! | AATAAGAATTATGTTGTGAA+GGG | - | chr4_3:59799136-59799155 | None:intergenic | 20.0% |
| !! | AAATAAGAATTATGTTGTGA+AGG | - | chr4_3:59799137-59799156 | None:intergenic | 20.0% |
| !! | AAACTAAAATCTAGATAAGT+TGG | + | chr4_3:59799193-59799212 | Msa0652090:intron | 20.0% |
| !! | GTCAAATTTAAATGTTCAAT+TGG | + | chr4_3:59800134-59800153 | Msa0652090:intron | 20.0% |
| ! | TATGAATTATGGAGATAACT+AGG | - | chr4_3:59792257-59792276 | None:intergenic | 25.0% |
| ! | GTATTAGGGTTTATGAATTA+TGG | - | chr4_3:59792268-59792287 | None:intergenic | 25.0% |
| !!! | TTCTGTATTAGTTTTTTCAC+CGG | - | chr4_3:59792407-59792426 | None:intergenic | 25.0% |
| ! | GTGAAAAAACTAATACAGAA+TGG | + | chr4_3:59792407-59792426 | Msa0652090:exon | 25.0% |
| !!! | ATTTTAATCATCAGGTGAAA+AGG | - | chr4_3:59792555-59792574 | None:intergenic | 25.0% |
| ! | ATAACCTTATCATTGAAAAC+AGG | - | chr4_3:59792716-59792735 | None:intergenic | 25.0% |
| ! | AATTAACCAAACAAAGTTGA+AGG | - | chr4_3:59792795-59792814 | None:intergenic | 25.0% |
| !! | TTTTATATGCATGTATAAGC+TGG | + | chr4_3:59793112-59793131 | Msa0652090:intron | 25.0% |
| ! | TTTATATGCATGTATAAGCT+GGG | + | chr4_3:59793113-59793132 | Msa0652090:intron | 25.0% |
| ! | AAAACTTCCAAAAGTAACAA+AGG | - | chr4_3:59793166-59793185 | None:intergenic | 25.0% |
| !! | CTTGAATAATTGTAACTTGT+TGG | + | chr4_3:59793478-59793497 | Msa0652090:intron | 25.0% |
| !!! | CATTTTTTCATCCATTAATG+TGG | - | chr4_3:59793699-59793718 | None:intergenic | 25.0% |
| ! | AATGGATGAAAAAATGCTTA+CGG | + | chr4_3:59793703-59793722 | Msa0652090:intron | 25.0% |
| !!! | TATATTTTTACAGGATGCAT+CGG | + | chr4_3:59793762-59793781 | Msa0652090:intron | 25.0% |
| ! | ACACAATCGATATATATCAA+TGG | - | chr4_3:59793882-59793901 | None:intergenic | 25.0% |
| !!! | AATCAGTTTTTTTCATCTGT+AGG | - | chr4_3:59793983-59794002 | None:intergenic | 25.0% |
| ! | TTTCAAGAGTAAGCATATAT+TGG | + | chr4_3:59794001-59794020 | Msa0652090:intron | 25.0% |
| ! | CAAGATATTAAGGACATAAA+TGG | + | chr4_3:59794213-59794232 | Msa0652090:intron | 25.0% |
| !!! | CTAATCATTTTTTCGGTTTT+GGG | - | chr4_3:59794252-59794271 | None:intergenic | 25.0% |
| !!! | TCTAATCATTTTTTCGGTTT+TGG | - | chr4_3:59794253-59794272 | None:intergenic | 25.0% |
| !!! | CTTTTTCAATCAATTTTGGT+AGG | - | chr4_3:59794281-59794300 | None:intergenic | 25.0% |
| ! | ACAAAAAAAATCATGCTGAA+TGG | - | chr4_3:59794540-59794559 | None:intergenic | 25.0% |
| !!! | CATGATTTTTTTTGTTTTGC+TGG | + | chr4_3:59794545-59794564 | Msa0652090:intron | 25.0% |
| ! | CAATTCAGCATAGAAAAATA+TGG | - | chr4_3:59794847-59794866 | None:intergenic | 25.0% |
| !!! | AATTAACCCATTTTTAAGCA+AGG | + | chr4_3:59795013-59795032 | Msa0652090:CDS | 25.0% |
| ! | GAAAAACCTTGCTTAAAAAT+GGG | - | chr4_3:59795022-59795041 | None:intergenic | 25.0% |
| ! | AGAAAAACCTTGCTTAAAAA+TGG | - | chr4_3:59795023-59795042 | None:intergenic | 25.0% |
| ! | CATTAAACTTCAATTACTGT+AGG | - | chr4_3:59795155-59795174 | None:intergenic | 25.0% |
| !! | CGTGGTTTTCATAATATTTT+TGG | - | chr4_3:59795191-59795210 | None:intergenic | 25.0% |
| ! | AAGAGAAAACTATTGTCTAT+AGG | - | chr4_3:59795567-59795586 | None:intergenic | 25.0% |
| ! | CTTATTTATGTTGTTCTACT+TGG | + | chr4_3:59795670-59795689 | Msa0652090:intron | 25.0% |
| ! | ATTTATTTCATCTCTTGTGA+AGG | + | chr4_3:59795725-59795744 | Msa0652090:intron | 25.0% |
| !!! | CAAAGCAATTTGTTAGAATT+CGG | - | chr4_3:59796053-59796072 | None:intergenic | 25.0% |
| ! | TTGTTCTGTAATACATTGTT+TGG | + | chr4_3:59796070-59796089 | Msa0652090:intron | 25.0% |
| ! | TACTAAATGTTGTCAAACAA+TGG | + | chr4_3:59796093-59796112 | Msa0652090:intron | 25.0% |
| ! | CCAAAGATATTCAAATAAGA+TGG | - | chr4_3:59796945-59796964 | None:intergenic | 25.0% |
| !! | CCATCTTATTTGAATATCTT+TGG | + | chr4_3:59796942-59796961 | Msa0652090:intron | 25.0% |
| !! | ATCTTTGGTTTCTTGTATTA+TGG | + | chr4_3:59796957-59796976 | Msa0652090:intron | 25.0% |
| !!! | TCCATTTTATTTGAAGTCTT+CGG | + | chr4_3:59796984-59797003 | Msa0652090:intron | 25.0% |
| !! | CCATTGATTATTGTAAATAC+AGG | - | chr4_3:59797112-59797131 | None:intergenic | 25.0% |
| ! | CCTGTATTTACAATAATCAA+TGG | + | chr4_3:59797109-59797128 | Msa0652090:intron | 25.0% |
| ! | TGCATAAAAATTAACTGTTG+AGG | - | chr4_3:59797644-59797663 | None:intergenic | 25.0% |
| ! | GAAAAAATCAGATTCCTTAA+AGG | + | chr4_3:59797693-59797712 | Msa0652090:CDS | 25.0% |
| !! | TTGTTTCAATTTTTCCTCAA+GGG | - | chr4_3:59797900-59797919 | None:intergenic | 25.0% |
| !! | TTTGTTTCAATTTTTCCTCA+AGG | - | chr4_3:59797901-59797920 | None:intergenic | 25.0% |
| ! | TGAGGAAAAATTGAAACAAA+AGG | + | chr4_3:59797901-59797920 | Msa0652090:CDS | 25.0% |
| ! | GAGGAAAAATTGAAACAAAA+GGG | + | chr4_3:59797902-59797921 | Msa0652090:CDS | 25.0% |
| ! | TTCAGATTAGCATTAACAAA+CGG | - | chr4_3:59798153-59798172 | None:intergenic | 25.0% |
| !! | ACTCATTGAGATTTTATTGA+TGG | + | chr4_3:59798185-59798204 | Msa0652090:intron | 25.0% |
| !! | TTTTTGAACTCGAGATTAAA+AGG | - | chr4_3:59798278-59798297 | None:intergenic | 25.0% |
| !! | TAGAGTTGTCTTTTATATTG+AGG | - | chr4_3:59798430-59798449 | None:intergenic | 25.0% |
| ! | AAAAAATGTCTGACCAAAAT+TGG | - | chr4_3:59798463-59798482 | None:intergenic | 25.0% |
| ! | CACATATATACATCCAATAT+GGG | + | chr4_3:59798658-59798677 | Msa0652090:intron | 25.0% |
| ! | ACACCATTATAACTACAATT+TGG | + | chr4_3:59799086-59799105 | Msa0652090:intron | 25.0% |
| ! | CAACCAAATTGTAGTTATAA+TGG | - | chr4_3:59799092-59799111 | None:intergenic | 25.0% |
| ! | AGAAGCGAATTATCTTAAAA+TGG | + | chr4_3:59799239-59799258 | Msa0652090:intron | 25.0% |
| ! | TAGTTTCATATTGAAGAAGA+TGG | - | chr4_3:59799835-59799854 | None:intergenic | 25.0% |
| ! | CAAATTTGTAAGTGTTAACT+TGG | + | chr4_3:59799989-59800008 | Msa0652090:intron | 25.0% |
| ! | AACATCTTTGGCATATTAAA+TGG | + | chr4_3:59800445-59800464 | Msa0652090:three_prime_UTR | 25.0% |
| CTTCAGTGGAAAAGTTATAA+CGG | - | chr4_3:59792500-59792519 | None:intergenic | 30.0% | |
| ! | AATGCCTGTTTTCAATGATA+AGG | + | chr4_3:59792709-59792728 | Msa0652090:CDS | 30.0% |
| !! | GTTTGGTTTGTTTAGTAATG+AGG | + | chr4_3:59793231-59793250 | Msa0652090:intron | 30.0% |
| ! | AAATATTTGAAGTCGTTGCA+TGG | + | chr4_3:59793260-59793279 | Msa0652090:CDS | 30.0% |
| GGTATTAAGAAAACTATCGT+TGG | + | chr4_3:59793323-59793342 | Msa0652090:CDS | 30.0% | |
| ! | TGCTGATAATCGTAATTTTG+AGG | + | chr4_3:59793364-59793383 | Msa0652090:CDS | 30.0% |
| !!! | ATAATCGTAATTTTGAGGTG+AGG | + | chr4_3:59793369-59793388 | Msa0652090:intron | 30.0% |
| GAAAGCAAAACAATATACAG+AGG | + | chr4_3:59793572-59793591 | Msa0652090:CDS | 30.0% | |
| ATGGATGAAAAAATGCTTAC+GGG | + | chr4_3:59793704-59793723 | Msa0652090:intron | 30.0% | |
| TAATGTAACTTTCAATGTCG+AGG | + | chr4_3:59793786-59793805 | Msa0652090:CDS | 30.0% | |
| AATCGATATATATCAATGGC+AGG | - | chr4_3:59793878-59793897 | None:intergenic | 30.0% | |
| ! | TTATCTGGTTTAGTAGCAAA+GGG | - | chr4_3:59793924-59793943 | None:intergenic | 30.0% |
| ! | ATTATCTGGTTTAGTAGCAA+AGG | - | chr4_3:59793925-59793944 | None:intergenic | 30.0% |
| ATTCACAGCTATGAATGAAA+TGG | - | chr4_3:59793958-59793977 | None:intergenic | 30.0% | |
| ! | ATTACAAAACTGATTAGCCA+AGG | + | chr4_3:59794121-59794140 | Msa0652090:intron | 30.0% |
| ! | TTACAAAACTGATTAGCCAA+GGG | + | chr4_3:59794122-59794141 | Msa0652090:intron | 30.0% |
| TATGTTTCTCTATTCACCAA+TGG | - | chr4_3:59794175-59794194 | None:intergenic | 30.0% | |
| TTGTCCTACTTTAGATGAAA+AGG | + | chr4_3:59794322-59794341 | Msa0652090:intron | 30.0% | |
| TCATTGTTTACCCTCAAATT+GGG | - | chr4_3:59794348-59794367 | None:intergenic | 30.0% | |
| TTCATTGTTTACCCTCAAAT+TGG | - | chr4_3:59794349-59794368 | None:intergenic | 30.0% | |
| TGAGGGTAAACAATGAAATA+AGG | + | chr4_3:59794352-59794371 | Msa0652090:intron | 30.0% | |
| GAGGGTAAACAATGAAATAA+GGG | + | chr4_3:59794353-59794372 | Msa0652090:intron | 30.0% | |
| ACTAATTATCCTCAAAGCAA+TGG | - | chr4_3:59794471-59794490 | None:intergenic | 30.0% | |
| ! | AATATGGGTTGAAAAGAAGA+GGG | - | chr4_3:59794831-59794850 | None:intergenic | 30.0% |
| ! | AAATATGGGTTGAAAAGAAG+AGG | - | chr4_3:59794832-59794851 | None:intergenic | 30.0% |
| ACAACCAATCAACTAATTCT+GGG | - | chr4_3:59794956-59794975 | None:intergenic | 30.0% | |
| GAACTACTCATGGAAAAAAT+GGG | - | chr4_3:59795074-59795093 | None:intergenic | 30.0% | |
| ! | GACTGATTCTAATATTCTAG+AGG | - | chr4_3:59795289-59795308 | None:intergenic | 30.0% |
| CATCAAAAATATATCTAGCG+AGG | + | chr4_3:59795327-59795346 | Msa0652090:intron | 30.0% | |
| AAAGAGACGCAAAAAATGAA+AGG | - | chr4_3:59795382-59795401 | None:intergenic | 30.0% | |
| TTTGCGTCTCTTTAAACTTT+AGG | + | chr4_3:59795389-59795408 | Msa0652090:intron | 30.0% | |
| TAACACTATAATTCCTCACA+GGG | - | chr4_3:59795453-59795472 | None:intergenic | 30.0% | |
| ATAACACTATAATTCCTCAC+AGG | - | chr4_3:59795454-59795473 | None:intergenic | 30.0% | |
| ACAGATACACTTAAAAACAG+TGG | - | chr4_3:59795487-59795506 | None:intergenic | 30.0% | |
| ATCTCTTGTGAAGGTTAAAA+AGG | + | chr4_3:59795734-59795753 | Msa0652090:intron | 30.0% | |
| TCTCTTGTGAAGGTTAAAAA+GGG | + | chr4_3:59795735-59795754 | Msa0652090:intron | 30.0% | |
| TAAAAAGGGGGAAATAGTTA+TGG | + | chr4_3:59795749-59795768 | Msa0652090:CDS | 30.0% | |
| TTAATTCCTTGATCTCTTCA+AGG | - | chr4_3:59795899-59795918 | None:intergenic | 30.0% | |
| GATCAAGGAATTAATGAATC+AGG | + | chr4_3:59795905-59795924 | Msa0652090:CDS | 30.0% | |
| ! | TGAACATTGCTGTTAAATAG+CGG | + | chr4_3:59796005-59796024 | Msa0652090:intron | 30.0% |
| ! | AATATTTTCTAACAGTGACC+AGG | - | chr4_3:59796211-59796230 | None:intergenic | 30.0% |
| ACATATTAAGAAACTATGGG+AGG | + | chr4_3:59796235-59796254 | Msa0652090:intron | 30.0% | |
| GATGAATGACTTGATGTAAT+GGG | - | chr4_3:59796344-59796363 | None:intergenic | 30.0% | |
| ACACTGTCAAAAAATGTAGA+CGG | - | chr4_3:59796418-59796437 | None:intergenic | 30.0% | |
| TACTGAAATCACTGTAAATC+GGG | - | chr4_3:59796551-59796570 | None:intergenic | 30.0% | |
| GTACTGAAATCACTGTAAAT+CGG | - | chr4_3:59796552-59796571 | None:intergenic | 30.0% | |
| !! | GTACTTCATGTTCAAGTTTT+TGG | + | chr4_3:59796568-59796587 | Msa0652090:intron | 30.0% |
| !!! | TTTTTGGTTGCTTTTCTTTC+TGG | + | chr4_3:59796584-59796603 | Msa0652090:intron | 30.0% |
| ! | TGATGATGACGATATTAAAC+TGG | - | chr4_3:59796674-59796693 | None:intergenic | 30.0% |
| ACACAATCCAATATAAGCAT+AGG | - | chr4_3:59797158-59797177 | None:intergenic | 30.0% | |
| ! | TATCAAATCTGAGATGTACT+CGG | + | chr4_3:59797328-59797347 | Msa0652090:intron | 30.0% |
| TTCGTTTATAGCGATAGAAT+CGG | - | chr4_3:59797508-59797527 | None:intergenic | 30.0% | |
| AAATCAGATTCCTTAAAGGA+TGG | + | chr4_3:59797697-59797716 | Msa0652090:CDS | 30.0% | |
| !!! | TTTTTTTGCACCATCCTTTA+AGG | - | chr4_3:59797710-59797729 | None:intergenic | 30.0% |
| TTAAAGGATGGTGCAAAAAA+AGG | + | chr4_3:59797709-59797728 | Msa0652090:CDS | 30.0% | |
| AGGAAGAAAAGTAAAAGATC+AGG | + | chr4_3:59797729-59797748 | Msa0652090:CDS | 30.0% | |
| !! | TTTTGAGAATTACTAGGCTT+TGG | - | chr4_3:59797947-59797966 | None:intergenic | 30.0% |
| TGTAAGTATCTTACAAATGC+AGG | - | chr4_3:59798247-59798266 | None:intergenic | 30.0% | |
| TCGAGTTCAAAAAATGTCAT+TGG | + | chr4_3:59798285-59798304 | Msa0652090:intron | 30.0% | |
| CGAGTTCAAAAAATGTCATT+GGG | + | chr4_3:59798286-59798305 | Msa0652090:intron | 30.0% | |
| TTCAAAAAATGTCATTGGGA+CGG | + | chr4_3:59798290-59798309 | Msa0652090:intron | 30.0% | |
| ! | CTAGAAGTAACTACCAATTT+TGG | + | chr4_3:59798447-59798466 | Msa0652090:intron | 30.0% |
| ACAACACTGTTAAATGAGTT+TGG | + | chr4_3:59798503-59798522 | Msa0652090:intron | 30.0% | |
| AAAAGATAGTTCATGAGTTG+AGG | + | chr4_3:59798537-59798556 | Msa0652090:intron | 30.0% | |
| ! | AAAGATAGTTCATGAGTTGA+GGG | + | chr4_3:59798538-59798557 | Msa0652090:intron | 30.0% |
| !! | TATGGGTATTGAAGTTGTAT+TGG | - | chr4_3:59798624-59798643 | None:intergenic | 30.0% |
| ATTGGATGTATATATGTGGT+TGG | - | chr4_3:59798656-59798675 | None:intergenic | 30.0% | |
| CCATATTGGATGTATATATG+TGG | - | chr4_3:59798660-59798679 | None:intergenic | 30.0% | |
| CCACATATATACATCCAATA+TGG | + | chr4_3:59798657-59798676 | Msa0652090:intron | 30.0% | |
| ACTCTTCATAAACTCATTTC+AGG | - | chr4_3:59798968-59798987 | None:intergenic | 30.0% | |
| TGAAATGAGTTTATGAAGAG+TGG | + | chr4_3:59798967-59798986 | Msa0652090:intron | 30.0% | |
| GGGCAAATTTATACAGAAAA+AGG | - | chr4_3:59799116-59799135 | None:intergenic | 30.0% | |
| TATGGATAATAGCGAAAAGA+AGG | - | chr4_3:59799332-59799351 | None:intergenic | 30.0% | |
| ACTAAAGTTAGCAATAGTCA+GGG | - | chr4_3:59799393-59799412 | None:intergenic | 30.0% | |
| AACTAAAGTTAGCAATAGTC+AGG | - | chr4_3:59799394-59799413 | None:intergenic | 30.0% | |
| ! | ATTGAGGATGATAATGATGA+TGG | + | chr4_3:59799628-59799647 | Msa0652090:CDS | 30.0% |
| !!! | AAAGTTTGTTTTGCTTTTGC+AGG | + | chr4_3:59799854-59799873 | Msa0652090:intron | 30.0% |
| TGACAAACAGTAAACAAGAA+AGG | - | chr4_3:59800162-59800181 | None:intergenic | 30.0% | |
| ! | TTTACTGTTTGTCATGCTTT+TGG | + | chr4_3:59800168-59800187 | Msa0652090:intron | 30.0% |
| TAGAACGATATTGTAACGTA+AGG | - | chr4_3:59800351-59800370 | None:intergenic | 30.0% | |
| GATTGGAAACTTAACATCTT+TGG | + | chr4_3:59800433-59800452 | Msa0652090:three_prime_UTR | 30.0% | |
| TCAGAATAGAGAGCAAATAC+CGG | - | chr4_3:59792362-59792381 | None:intergenic | 35.0% | |
| AGTACTATTCAAGATTTCGC+CGG | + | chr4_3:59792385-59792404 | Msa0652090:five_prime_UTR | 35.0% | |
| TAATACAGAATGGCGAAGAA+AGG | + | chr4_3:59792417-59792436 | Msa0652090:exon | 35.0% | |
| ! | TAACTTTTCCACTGAAGACA+TGG | + | chr4_3:59792503-59792522 | Msa0652090:CDS | 35.0% |
| GAATCAGCATTAATGTCAAG+TGG | - | chr4_3:59792665-59792684 | None:intergenic | 35.0% | |
| ! | GCTTTTCCTTCAACTTTGTT+TGG | + | chr4_3:59792786-59792805 | Msa0652090:intron | 35.0% |
| ! | TGATAATGATGACACTGATG+AGG | + | chr4_3:59792846-59792865 | Msa0652090:CDS | 35.0% |
| ATACAAAAAGACCCAAGCAT+TGG | + | chr4_3:59793046-59793065 | Msa0652090:intron | 35.0% | |
| TACGATTATCAGCACCATAT+CGG | - | chr4_3:59793358-59793377 | None:intergenic | 35.0% | |
| AATTTCTTCCTCTTCCTTTG+GGG | - | chr4_3:59793532-59793551 | None:intergenic | 35.0% | |
| CAATTTCTTCCTCTTCCTTT+GGG | - | chr4_3:59793533-59793552 | None:intergenic | 35.0% | |
| AATGTTATGTTGCCTAAGCA+TGG | + | chr4_3:59793666-59793685 | Msa0652090:intron | 35.0% | |
| TGGATGAAAAAATGCTTACG+GGG | + | chr4_3:59793705-59793724 | Msa0652090:intron | 35.0% | |
| AGCAAATGAACGTTCTGTAT+AGG | + | chr4_3:59793833-59793852 | Msa0652090:CDS | 35.0% | |
| TATATATCAATGGCAGGATG+AGG | - | chr4_3:59793872-59793891 | None:intergenic | 35.0% | |
| ATGGATGCAATGTCATTATC+TGG | - | chr4_3:59793939-59793958 | None:intergenic | 35.0% | |
| !! | TTGAATTTTAGAGGAGCGAA+TGG | + | chr4_3:59794072-59794091 | Msa0652090:intron | 35.0% |
| !! | AGATTACCTTCTGAAACCAT+TGG | + | chr4_3:59794156-59794175 | Msa0652090:intron | 35.0% |
| TATTCACCAATGGTTTCAGA+AGG | - | chr4_3:59794165-59794184 | None:intergenic | 35.0% | |
| CAATAGCTGAGATTTCTACT+GGG | - | chr4_3:59794391-59794410 | None:intergenic | 35.0% | |
| CTGCACATGTAAAATCATCA+AGG | - | chr4_3:59794414-59794433 | None:intergenic | 35.0% | |
| TGGCATATCAGACATCTAAA+AGG | - | chr4_3:59794579-59794598 | None:intergenic | 35.0% | |
| GTGTTGAATCCTGACAAAAT+TGG | + | chr4_3:59794765-59794784 | Msa0652090:intron | 35.0% | |
| AATCCTGACAAAATTGGATC+AGG | + | chr4_3:59794771-59794790 | Msa0652090:intron | 35.0% | |
| AAGGCCATAACAGCAATAAA+GGG | - | chr4_3:59794799-59794818 | None:intergenic | 35.0% | |
| TAAGGCCATAACAGCAATAA+AGG | - | chr4_3:59794800-59794819 | None:intergenic | 35.0% | |
| ! | AAGAAGAGGGTGTATATGTA+AGG | - | chr4_3:59794818-59794837 | None:intergenic | 35.0% |
| CAACCAATCAACTAATTCTG+GGG | - | chr4_3:59794955-59794974 | None:intergenic | 35.0% | |
| GACAACCAATCAACTAATTC+TGG | - | chr4_3:59794957-59794976 | None:intergenic | 35.0% | |
| TTGGTTGTCAGAATTAAACG+AGG | + | chr4_3:59794968-59794987 | Msa0652090:CDS | 35.0% | |
| GGAACTACTCATGGAAAAAA+TGG | - | chr4_3:59795075-59795094 | None:intergenic | 35.0% | |
| !!! | CATAGTTTTGGAACTACTCA+TGG | - | chr4_3:59795084-59795103 | None:intergenic | 35.0% |
| AGTTCCAAAACTATGTGAAG+AGG | + | chr4_3:59795089-59795108 | Msa0652090:intron | 35.0% | |
| ! | TCAACCTCTTCACATAGTTT+TGG | - | chr4_3:59795096-59795115 | None:intergenic | 35.0% |
| ACAATGAGCATGCTTTCATT+AGG | - | chr4_3:59795217-59795236 | None:intergenic | 35.0% | |
| ! | TCATTGTGAATGACTTGGAA+TGG | + | chr4_3:59795230-59795249 | Msa0652090:intron | 35.0% |
| TATTCTGTTTACCGAGACAT+TGG | + | chr4_3:59795424-59795443 | Msa0652090:intron | 35.0% | |
| ATTCTGTTTACCGAGACATT+GGG | + | chr4_3:59795425-59795444 | Msa0652090:intron | 35.0% | |
| CTCTTGTGAAGGTTAAAAAG+GGG | + | chr4_3:59795736-59795755 | Msa0652090:intron | 35.0% | |
| TCTTGTGAAGGTTAAAAAGG+GGG | + | chr4_3:59795737-59795756 | Msa0652090:intron | 35.0% | |
| AAAGGTTATAGCTTGGCAAT+AGG | - | chr4_3:59795820-59795839 | None:intergenic | 35.0% | |
| GAAGGTAAAAGGTTATAGCT+TGG | - | chr4_3:59795827-59795846 | None:intergenic | 35.0% | |
| AGAATTCGGCTAAGATATTG+CGG | - | chr4_3:59796039-59796058 | None:intergenic | 35.0% | |
| TTGTCAAACAATGGCTATAG+TGG | + | chr4_3:59796102-59796121 | Msa0652090:intron | 35.0% | |
| CATTGTGTTAAAAACCAGAC+CGG | + | chr4_3:59796134-59796153 | Msa0652090:intron | 35.0% | |
| ! | TGACTTGATGTAATGGGATT+GGG | - | chr4_3:59796338-59796357 | None:intergenic | 35.0% |
| ! | ATGACTTGATGTAATGGGAT+TGG | - | chr4_3:59796339-59796358 | None:intergenic | 35.0% |
| GGATGAATGACTTGATGTAA+TGG | - | chr4_3:59796345-59796364 | None:intergenic | 35.0% | |
| GGTCAAGGCATATAAAATCT+GGG | - | chr4_3:59796366-59796385 | None:intergenic | 35.0% | |
| TGGTCAAGGCATATAAAATC+TGG | - | chr4_3:59796367-59796386 | None:intergenic | 35.0% | |
| AAAAATGTAGACGGTCATCA+GGG | - | chr4_3:59796409-59796428 | None:intergenic | 35.0% | |
| AAAAAATGTAGACGGTCATC+AGG | - | chr4_3:59796410-59796429 | None:intergenic | 35.0% | |
| GAGAGAAGCAATAAAGGTTT+GGG | - | chr4_3:59796499-59796518 | None:intergenic | 35.0% | |
| AGAGAGAAGCAATAAAGGTT+TGG | - | chr4_3:59796500-59796519 | None:intergenic | 35.0% | |
| AAGCAAGAGAGAAGCAATAA+AGG | - | chr4_3:59796505-59796524 | None:intergenic | 35.0% | |
| ACTGAAATCACTGTAAATCG+GGG | - | chr4_3:59796550-59796569 | None:intergenic | 35.0% | |
| GTTGACGGTTATACTTCAAT+CGG | + | chr4_3:59796641-59796660 | Msa0652090:intron | 35.0% | |
| !!! | AGGTCCTGGTTTTAAAACAA+GGG | + | chr4_3:59796747-59796766 | Msa0652090:intron | 35.0% |
| !!! | ATAGCCCTTGTTTTAAAACC+AGG | - | chr4_3:59796754-59796773 | None:intergenic | 35.0% |
| ! | TATGTTTAGCTTCTGCTAGA+TGG | + | chr4_3:59796868-59796887 | Msa0652090:intron | 35.0% |
| GCCGAAGACTTCAAATAAAA+TGG | - | chr4_3:59796988-59797007 | None:intergenic | 35.0% | |
| TCTTCGGCTTTCTTGTATTA+TGG | + | chr4_3:59797000-59797019 | Msa0652090:intron | 35.0% | |
| ! | TTACAGTATTATTGCCGGTT+TGG | + | chr4_3:59797085-59797104 | Msa0652090:intron | 35.0% |
| TTGTAAATACAGGACCAAAC+CGG | - | chr4_3:59797102-59797121 | None:intergenic | 35.0% | |
| GGAAATGCCTATGCTTATAT+TGG | + | chr4_3:59797148-59797167 | Msa0652090:intron | 35.0% | |
| TCTATGCAATTAGGCACAAA+TGG | - | chr4_3:59797306-59797325 | None:intergenic | 35.0% | |
| AATTAACTGTTGAGGACTTG+TGG | - | chr4_3:59797636-59797655 | None:intergenic | 35.0% | |
| TTCATCTCAACTACATTGCT+AGG | - | chr4_3:59797676-59797695 | None:intergenic | 35.0% | |
| TTAACTGTTGCACCTTAACA+TGG | + | chr4_3:59797822-59797841 | Msa0652090:intron | 35.0% | |
| !! | GAACGCTTTTGAGAATTACT+AGG | - | chr4_3:59797953-59797972 | None:intergenic | 35.0% |
| AATCATCATATGTTGCAAGC+TGG | - | chr4_3:59798074-59798093 | None:intergenic | 35.0% | |
| !!! | TGATGATTTTGATGATGCTG+TGG | + | chr4_3:59798086-59798105 | Msa0652090:CDS | 35.0% |
| ATGATGCTGTGGTTGTTAAT+GGG | + | chr4_3:59798097-59798116 | Msa0652090:CDS | 35.0% | |
| TGCTAATCTGAAGAAACTCA+AGG | + | chr4_3:59798161-59798180 | Msa0652090:CDS | 35.0% | |
| TCAAAAAATGTCATTGGGAC+GGG | + | chr4_3:59798291-59798310 | Msa0652090:intron | 35.0% | |
| GACAAGAGACTAATATCCTA+GGG | - | chr4_3:59798343-59798362 | None:intergenic | 35.0% | |
| AGACAAGAGACTAATATCCT+AGG | - | chr4_3:59798344-59798363 | None:intergenic | 35.0% | |
| AGTCTCTTGTCTATTGAAAG+AGG | + | chr4_3:59798352-59798371 | Msa0652090:intron | 35.0% | |
| GTCTCTTGTCTATTGAAAGA+GGG | + | chr4_3:59798353-59798372 | Msa0652090:intron | 35.0% | |
| AGATAACATGCAGTAAAAGC+AGG | - | chr4_3:59798404-59798423 | None:intergenic | 35.0% | |
| CATTGTTAAGGTTCCCATAT+TGG | - | chr4_3:59798674-59798693 | None:intergenic | 35.0% | |
| ATATGGGAACCTTAACAATG+TGG | + | chr4_3:59798674-59798693 | Msa0652090:intron | 35.0% | |
| TATGGGAACCTTAACAATGT+GGG | + | chr4_3:59798675-59798694 | Msa0652090:intron | 35.0% | |
| TGGTATCAGAGTCAGATTAA+GGG | - | chr4_3:59798769-59798788 | None:intergenic | 35.0% | |
| AACAACCACACAAGTGTTTA+AGG | - | chr4_3:59798813-59798832 | None:intergenic | 35.0% | |
| GAGGGAGGATATAAATTACA+CGG | + | chr4_3:59798898-59798917 | Msa0652090:intron | 35.0% | |
| !! | TCAGTTTCTAGGAAGCATTA+TGG | - | chr4_3:59799350-59799369 | None:intergenic | 35.0% |
| ACCTTAACACAAAAAGGGAT+CGG | - | chr4_3:59799514-59799533 | None:intergenic | 35.0% | |
| AAGCCACCTTAACACAAAAA+GGG | - | chr4_3:59799519-59799538 | None:intergenic | 35.0% | |
| !! | TGATGATGGTGATGATCAAA+TGG | + | chr4_3:59799642-59799661 | Msa0652090:CDS | 35.0% |
| ! | ACCTCTTCAAGGTGAAATTT+TGG | + | chr4_3:59799787-59799806 | Msa0652090:intron | 35.0% |
| TCCAAAATTTCACCTTGAAG+AGG | - | chr4_3:59799791-59799810 | None:intergenic | 35.0% | |
| ! | TCTTCAAGGTGAAATTTTGG+AGG | + | chr4_3:59799790-59799809 | Msa0652090:intron | 35.0% |
| GAATCCTAGAAAGAACTACA+AGG | + | chr4_3:59800076-59800095 | Msa0652090:CDS | 35.0% | |
| GCTTTCACTTACTCTTAGAA+TGG | + | chr4_3:59800100-59800119 | Msa0652090:intron | 35.0% | |
| GATAGTTGCATTAATTCCAG+TGG | - | chr4_3:59800288-59800307 | None:intergenic | 35.0% | |
| GGCATATTAAATGGTTGTCA+AGG | + | chr4_3:59800454-59800473 | Msa0652090:three_prime_UTR | 35.0% | |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr4_3:59800531-59800550 | None:intergenic | 35.0% |
| AAAAGTTATAACGGTCGCGT+CGG | - | chr4_3:59792491-59792510 | None:intergenic | 40.0% | |
| ATTCGCAGTTCATAAGCAGA+GGG | + | chr4_3:59792631-59792650 | Msa0652090:intron | 40.0% | |
| AATGATGACACTGATGAGGA+CGG | + | chr4_3:59792850-59792869 | Msa0652090:CDS | 40.0% | |
| GACGAGGATGATGAATATGA+TGG | + | chr4_3:59792895-59792914 | Msa0652090:CDS | 40.0% | |
| GGATGATGAATATGATGGCA+AGG | + | chr4_3:59792900-59792919 | Msa0652090:CDS | 40.0% | |
| TGAATATGATGGCAAGGAGA+AGG | + | chr4_3:59792906-59792925 | Msa0652090:CDS | 40.0% | |
| GAATATGATGGCAAGGAGAA+GGG | + | chr4_3:59792907-59792926 | Msa0652090:CDS | 40.0% | |
| ! | GCTTGGGTCTTTTTGTATCT+CGG | - | chr4_3:59793044-59793063 | None:intergenic | 40.0% |
| TGCATGTATAAGCTGGGTTT+AGG | + | chr4_3:59793119-59793138 | Msa0652090:intron | 40.0% | |
| GCATGTATAAGCTGGGTTTA+GGG | + | chr4_3:59793120-59793139 | Msa0652090:intron | 40.0% | |
| ! | TATTTGAAGTCGTTGCATGG+TGG | + | chr4_3:59793263-59793282 | Msa0652090:CDS | 40.0% |
| CAAGATGAAGAAGACGATGA+AGG | + | chr4_3:59793302-59793321 | Msa0652090:CDS | 40.0% | |
| GCAATTTCTTCCTCTTCCTT+TGG | - | chr4_3:59793534-59793553 | None:intergenic | 40.0% | |
| !! | AGAGGAAGATTTTGACCTTG+TGG | + | chr4_3:59793590-59793609 | Msa0652090:CDS | 40.0% |
| CATTATCTTCGTCTTCCACA+AGG | - | chr4_3:59793608-59793627 | None:intergenic | 40.0% | |
| TTATGTTGCCTAAGCATGGT+CGG | + | chr4_3:59793670-59793689 | Msa0652090:intron | 40.0% | |
| ! | ATGGTCGGTTTCCACATTAA+TGG | + | chr4_3:59793685-59793704 | Msa0652090:intron | 40.0% |
| !! | AATTTTAGAGGAGCGAATGG+AGG | + | chr4_3:59794075-59794094 | Msa0652090:intron | 40.0% |
| !! | TGGAGGAAATTTGGTGTTCA+CGG | + | chr4_3:59794092-59794111 | Msa0652090:intron | 40.0% |
| !! | AATCTTGACTAGTCTTCCCT+TGG | - | chr4_3:59794141-59794160 | None:intergenic | 40.0% |
| !! | TGGGCCTTTTCATCTAAAGT+AGG | - | chr4_3:59794329-59794348 | None:intergenic | 40.0% |
| AGATGAAAAGGCCCAATTTG+AGG | + | chr4_3:59794334-59794353 | Msa0652090:intron | 40.0% | |
| GATGAAAAGGCCCAATTTGA+GGG | + | chr4_3:59794335-59794354 | Msa0652090:intron | 40.0% | |
| GCAATAGCTGAGATTTCTAC+TGG | - | chr4_3:59794392-59794411 | None:intergenic | 40.0% | |
| AGCAATATTCAGCAGAGATG+TGG | + | chr4_3:59794719-59794738 | Msa0652090:intron | 40.0% | |
| AGTGACTATCTTCTCTTTGC+AGG | + | chr4_3:59794925-59794944 | Msa0652090:intron | 40.0% | |
| TACTCATGGAAAAAATGGGC+AGG | - | chr4_3:59795070-59795089 | None:intergenic | 40.0% | |
| CATGCTTTCATTAGGTTACG+TGG | - | chr4_3:59795209-59795228 | None:intergenic | 40.0% | |
| CATGCTCATTGTGAATGACT+TGG | + | chr4_3:59795225-59795244 | Msa0652090:intron | 40.0% | |
| AATGGCATATTGCCGGAAAA+TGG | + | chr4_3:59795248-59795267 | Msa0652090:intron | 40.0% | |
| GAGACGCAAAAAATGAAAGG+AGG | - | chr4_3:59795379-59795398 | None:intergenic | 40.0% | |
| TTCTGTTTACCGAGACATTG+GGG | + | chr4_3:59795426-59795445 | Msa0652090:intron | 40.0% | |
| AAGGGGGAAATAGTTATGGA+AGG | + | chr4_3:59795753-59795772 | Msa0652090:CDS | 40.0% | |
| GGACTTGAGTAGAAGGTAAA+AGG | - | chr4_3:59795838-59795857 | None:intergenic | 40.0% | |
| ! | TTCAACCCAATCAAAGCACT+GGG | + | chr4_3:59796159-59796178 | Msa0652090:intron | 40.0% |
| GAAGATGACAACACACTGTT+TGG | - | chr4_3:59796387-59796406 | None:intergenic | 40.0% | |
| CTGAAATCACTGTAAATCGG+GGG | - | chr4_3:59796549-59796568 | None:intergenic | 40.0% | |
| !!! | TTTTAGCTTCAGTAGCAACC+TGG | + | chr4_3:59796618-59796637 | Msa0652090:intron | 40.0% |
| ! | TTTAGCTTCAGTAGCAACCT+GGG | + | chr4_3:59796619-59796638 | Msa0652090:intron | 40.0% |
| TATCGTCATCATCACCAGTT+TGG | + | chr4_3:59796680-59796699 | Msa0652090:intron | 40.0% | |
| !!! | CAGGTCCTGGTTTTAAAACA+AGG | + | chr4_3:59796746-59796765 | Msa0652090:intron | 40.0% |
| !! | GTTGTTTTGTCTGTTGAGTG+AGG | - | chr4_3:59797386-59797405 | None:intergenic | 40.0% |
| TGAACTTCCAGTTGAACTTG+AGG | + | chr4_3:59797413-59797432 | Msa0652090:CDS | 40.0% | |
| AGAATGTCCTCAAGTTCAAC+TGG | - | chr4_3:59797423-59797442 | None:intergenic | 40.0% | |
| TTTATAGCGATAGAATCGGC+TGG | - | chr4_3:59797504-59797523 | None:intergenic | 40.0% | |
| TATAAACGAAGAACAGCCTC+TGG | + | chr4_3:59797518-59797537 | Msa0652090:CDS | 40.0% | |
| AAAAGTTAGAGCTTCCCTTG+AGG | + | chr4_3:59797883-59797902 | Msa0652090:CDS | 40.0% | |
| GCAGATGTTGGAAACAAGAA+AGG | - | chr4_3:59798019-59798038 | None:intergenic | 40.0% | |
| GTCAGTAAGTTTGCAGATGT+TGG | - | chr4_3:59798031-59798050 | None:intergenic | 40.0% | |
| GATGATGCTGTGGTTGTTAA+TGG | + | chr4_3:59798096-59798115 | Msa0652090:CDS | 40.0% | |
| GTAAAAGCAGGACTTCATGT+TGG | - | chr4_3:59798392-59798411 | None:intergenic | 40.0% | |
| GTGTTAAGTGTTTGTCTGGT+TGG | - | chr4_3:59798567-59798586 | None:intergenic | 40.0% | |
| !! | GGAAGTGTTAAGTGTTTGTC+TGG | - | chr4_3:59798571-59798590 | None:intergenic | 40.0% |
| TCCCACATTGATAAGGTTTC+CGG | - | chr4_3:59798599-59798618 | None:intergenic | 40.0% | |
| ATTGGAGTCCCACATTGATA+AGG | - | chr4_3:59798606-59798625 | None:intergenic | 40.0% | |
| ACAACTTCAATACCCATACG+AGG | + | chr4_3:59798626-59798645 | Msa0652090:intron | 40.0% | |
| CAACTTCAATACCCATACGA+GGG | + | chr4_3:59798627-59798646 | Msa0652090:intron | 40.0% | |
| AATGAGGTCCCACATTGTTA+AGG | - | chr4_3:59798686-59798705 | None:intergenic | 40.0% | |
| !! | CGGGTATTGAATTCGTAATG+AGG | - | chr4_3:59798702-59798721 | None:intergenic | 40.0% |
| AAAATCCACGCTAAGTGTGT+AGG | - | chr4_3:59798725-59798744 | None:intergenic | 40.0% | |
| AGATTAAGGGTAGCAATGTG+GGG | - | chr4_3:59798756-59798775 | None:intergenic | 40.0% | |
| CAGATTAAGGGTAGCAATGT+GGG | - | chr4_3:59798757-59798776 | None:intergenic | 40.0% | |
| TCAGATTAAGGGTAGCAATG+TGG | - | chr4_3:59798758-59798777 | None:intergenic | 40.0% | |
| GTGGTATCAGAGTCAGATTA+AGG | - | chr4_3:59798770-59798789 | None:intergenic | 40.0% | |
| TCTTTGTCCAATGTTACCGT+TGG | + | chr4_3:59798832-59798851 | Msa0652090:intron | 40.0% | |
| TGTTCTCATGTTGATGCCAA+CGG | - | chr4_3:59798851-59798870 | None:intergenic | 40.0% | |
| AATTACACGGTTGTTGAGCT+AGG | + | chr4_3:59798911-59798930 | Msa0652090:intron | 40.0% | |
| TAATTCAACCCTTACCACGT+CGG | - | chr4_3:59799011-59799030 | None:intergenic | 40.0% | |
| TAGTCAGGGTAATAGTTCAG+TGG | - | chr4_3:59799379-59799398 | None:intergenic | 40.0% | |
| ! | TCCGATCCCTTTTTGTGTTA+AGG | + | chr4_3:59799510-59799529 | Msa0652090:intron | 40.0% |
| ! | GATCCCTTTTTGTGTTAAGG+TGG | + | chr4_3:59799513-59799532 | Msa0652090:intron | 40.0% |
| GAAGCCACCTTAACACAAAA+AGG | - | chr4_3:59799520-59799539 | None:intergenic | 40.0% | |
| ! | TTTTGTGTTAAGGTGGCTTC+TGG | + | chr4_3:59799520-59799539 | Msa0652090:intron | 40.0% |
| TGACCTTGTATCTCAAGATG+AGG | + | chr4_3:59799666-59799685 | Msa0652090:CDS | 40.0% | |
| ATGAGGAGGACATTGAAAGT+GGG | + | chr4_3:59799683-59799702 | Msa0652090:CDS | 40.0% | |
| ATGGAAATATCCCAGGCAAA+CGG | - | chr4_3:59799816-59799835 | None:intergenic | 40.0% | |
| GAAGAAGATGGAAATATCCC+AGG | - | chr4_3:59799823-59799842 | None:intergenic | 40.0% | |
| ! | AAAGCGCTATATCACTTCTC+AGG | + | chr4_3:59799918-59799937 | Msa0652090:CDS | 40.0% |
| GGTTCTTACTTGATCTCATC+AGG | + | chr4_3:59799939-59799958 | Msa0652090:intron | 40.0% | |
| AGCACCTTGTAGTTCTTTCT+AGG | - | chr4_3:59800083-59800102 | None:intergenic | 40.0% | |
| AAAAGCCGTTAAGAATCGCA+AGG | + | chr4_3:59800214-59800233 | Msa0652090:CDS | 40.0% | |
| AAAGCCGTTAAGAATCGCAA+GGG | + | chr4_3:59800215-59800234 | Msa0652090:CDS | 40.0% | |
| ! | TCAGTCGAAGTATCAGATTC+AGG | + | chr4_3:59800306-59800325 | Msa0652090:CDS | 40.0% |
| GTGATGAGGTTCAAAATTGG+TGG | - | chr4_3:59800379-59800398 | None:intergenic | 40.0% | |
| CAGGTGATGAGGTTCAAAAT+TGG | - | chr4_3:59800382-59800401 | None:intergenic | 40.0% | |
| GAAAGTGAGAAGTAACGCAG+GGG | - | chr4_3:59792325-59792344 | None:intergenic | 45.0% | |
| CGAAAGTGAGAAGTAACGCA+GGG | - | chr4_3:59792326-59792345 | None:intergenic | 45.0% | |
| ACGAAAGTGAGAAGTAACGC+AGG | - | chr4_3:59792327-59792346 | None:intergenic | 45.0% | |
| CTTTCGTCTTCTTCAACCTC+CGG | + | chr4_3:59792340-59792359 | Msa0652090:five_prime_UTR | 45.0% | |
| GAATAGAGAGCAAATACCGG+AGG | - | chr4_3:59792359-59792378 | None:intergenic | 45.0% | |
| TACAGAATGGCGAAGAAAGG+AGG | + | chr4_3:59792420-59792439 | Msa0652090:exon | 45.0% | |
| AAAGTTATAACGGTCGCGTC+GGG | - | chr4_3:59792490-59792509 | None:intergenic | 45.0% | |
| GATTCGCAGTTCATAAGCAG+AGG | + | chr4_3:59792630-59792649 | Msa0652090:intron | 45.0% | |
| ! | GGGTCTTTTTGTATCTCGGA+GGG | - | chr4_3:59793040-59793059 | None:intergenic | 45.0% |
| ! | TGGGTCTTTTTGTATCTCGG+AGG | - | chr4_3:59793041-59793060 | None:intergenic | 45.0% |
| ACAGAACACTGCCAATGCTT+GGG | - | chr4_3:59793060-59793079 | None:intergenic | 45.0% | |
| AACAGAACACTGCCAATGCT+TGG | - | chr4_3:59793061-59793080 | None:intergenic | 45.0% | |
| ! | TTGCATGGTGGAGATGAAGA+CGG | + | chr4_3:59793275-59793294 | Msa0652090:CDS | 45.0% |
| !! | GTTGGAAGAAAGCACCGATA+TGG | + | chr4_3:59793341-59793360 | Msa0652090:CDS | 45.0% |
| ! | GCTACAATCAAGTGATGACG+AGG | + | chr4_3:59793506-59793525 | Msa0652090:intron | 45.0% |
| GGATCTGAGTGCTTTGTCAA+AGG | + | chr4_3:59793807-59793826 | Msa0652090:CDS | 45.0% | |
| TCTGAGTGCTTTGTCAAAGG+AGG | + | chr4_3:59793810-59793829 | Msa0652090:CDS | 45.0% | |
| AGGAGCGAATGGAGGAAATT+TGG | + | chr4_3:59794083-59794102 | Msa0652090:intron | 45.0% | |
| !! | GGAGGAAATTTGGTGTTCAC+GGG | + | chr4_3:59794093-59794112 | Msa0652090:intron | 45.0% |
| !! | GAGGAAATTTGGTGTTCACG+GGG | + | chr4_3:59794094-59794113 | Msa0652090:intron | 45.0% |
| !! | AGATTTCTACTGGGTTGGTC+AGG | - | chr4_3:59794382-59794401 | None:intergenic | 45.0% |
| AGCTGAGATTTCTACTGGGT+TGG | - | chr4_3:59794387-59794406 | None:intergenic | 45.0% | |
| ! | TGCTGATTGCCATTGCTTTG+AGG | + | chr4_3:59794459-59794478 | Msa0652090:intron | 45.0% |
| CATCGTGACTATCTTGGCAA+TGG | - | chr4_3:59794599-59794618 | None:intergenic | 45.0% | |
| TCCTAGCATCGTGACTATCT+TGG | - | chr4_3:59794605-59794624 | None:intergenic | 45.0% | |
| TGGATGCATGTCTACCTTGA+GGG | + | chr4_3:59794739-59794758 | Msa0652090:intron | 45.0% | |
| ! | GAGCCTGATCCAATTTTGTC+AGG | - | chr4_3:59794777-59794796 | None:intergenic | 45.0% |
| ! | GGCTCCCTTTATTGCTGTTA+TGG | + | chr4_3:59794792-59794811 | Msa0652090:intron | 45.0% |
| CTGCCCCAGAATTAGTTGAT+TGG | + | chr4_3:59794949-59794968 | Msa0652090:CDS | 45.0% | |
| GACTTGGAATGGCATATTGC+CGG | + | chr4_3:59795241-59795260 | Msa0652090:intron | 45.0% | |
| GGGGAAATAGTTATGGAAGG+AGG | + | chr4_3:59795756-59795775 | Msa0652090:CDS | 45.0% | |
| TACCTTCTACTCAAGTCCGA+AGG | + | chr4_3:59795840-59795859 | Msa0652090:CDS | 45.0% | |
| ACCTTCTACTCAAGTCCGAA+GGG | + | chr4_3:59795841-59795860 | Msa0652090:CDS | 45.0% | |
| TCTTCAAGGCGAGCTATTAC+AGG | - | chr4_3:59795885-59795904 | None:intergenic | 45.0% | |
| ! | GCTAGCATCTGTGACTTGTA+AGG | + | chr4_3:59795946-59795965 | Msa0652090:intron | 45.0% |
| !! | CAGTGCTTTGATTGGGTTGA+AGG | - | chr4_3:59796160-59796179 | None:intergenic | 45.0% |
| CTTCAACCCAATCAAAGCAC+TGG | + | chr4_3:59796158-59796177 | Msa0652090:intron | 45.0% | |
| GCTAACCCAGTGCTTTGATT+GGG | - | chr4_3:59796167-59796186 | None:intergenic | 45.0% | |
| !! | CAATCAAAGCACTGGGTTAG+CGG | + | chr4_3:59796166-59796185 | Msa0652090:intron | 45.0% |
| GACAACACACTGTTTGGTCA+AGG | - | chr4_3:59796381-59796400 | None:intergenic | 45.0% | |
| AAATCACTGTAAATCGGGGG+TGG | - | chr4_3:59796546-59796565 | None:intergenic | 45.0% | |
| TGAAGTATAACCGTCAACCC+AGG | - | chr4_3:59796639-59796658 | None:intergenic | 45.0% | |
| GATCAGCTATGCATCCAAAC+TGG | - | chr4_3:59796697-59796716 | None:intergenic | 45.0% | |
| TGGTAGCCATGCTTACACTA+TGG | + | chr4_3:59797201-59797220 | Msa0652090:intron | 45.0% | |
| TAGCCATGCTTACACTATGG+AGG | + | chr4_3:59797204-59797223 | Msa0652090:intron | 45.0% | |
| AGTCCTCCATAGTGTAAGCA+TGG | - | chr4_3:59797210-59797229 | None:intergenic | 45.0% | |
| TGAATCACCAGAAGAAGCAG+TGG | + | chr4_3:59797548-59797567 | Msa0652090:CDS | 45.0% | |
| ATCACTACCACTGCTTCTTC+TGG | - | chr4_3:59797558-59797577 | None:intergenic | 45.0% | |
| TTGCACCTTAACATGGCAGA+AGG | + | chr4_3:59797829-59797848 | Msa0652090:intron | 45.0% | |
| GTGATCCTTCTGCCATGTTA+AGG | - | chr4_3:59797837-59797856 | None:intergenic | 45.0% | |
| ACATGGCAGAAGGATCACAT+TGG | + | chr4_3:59797839-59797858 | Msa0652090:intron | 45.0% | |
| GTGAAGCTATACCCATTAGC+TGG | - | chr4_3:59797980-59797999 | None:intergenic | 45.0% | |
| TTACTTGAGACAAGACCAGC+TGG | - | chr4_3:59798123-59798142 | None:intergenic | 45.0% | |
| ! | TCGGTGTTTGATTGTACCCT+AGG | + | chr4_3:59798324-59798343 | Msa0652090:intron | 45.0% |
| !! | GGACTTCATGTTGGTTTCTC+AGG | - | chr4_3:59798383-59798402 | None:intergenic | 45.0% |
| ACATTGATAAGGTTTCCGGC+AGG | - | chr4_3:59798595-59798614 | None:intergenic | 45.0% | |
| TGCCGGAAACCTTATCAATG+TGG | + | chr4_3:59798594-59798613 | Msa0652090:intron | 45.0% | |
| GCCGGAAACCTTATCAATGT+GGG | + | chr4_3:59798595-59798614 | Msa0652090:intron | 45.0% | |
| TCTGACTCTGATACCACTGT+TGG | + | chr4_3:59798773-59798792 | Msa0652090:intron | 45.0% | |
| CTGACTCTGATACCACTGTT+GGG | + | chr4_3:59798774-59798793 | Msa0652090:intron | 45.0% | |
| GTTGATGCCAACGGTAACAT+TGG | - | chr4_3:59798842-59798861 | None:intergenic | 45.0% | |
| AACAACGTAGTGAAGAGCAG+TGG | + | chr4_3:59798867-59798886 | Msa0652090:intron | 45.0% | |
| ACAACGTAGTGAAGAGCAGT+GGG | + | chr4_3:59798868-59798887 | Msa0652090:intron | 45.0% | |
| GACGTGGTAAGGGTTGAATT+AGG | + | chr4_3:59799010-59799029 | Msa0652090:intron | 45.0% | |
| AGTGGTCAGCATCAGTTTCT+AGG | - | chr4_3:59799361-59799380 | None:intergenic | 45.0% | |
| TCACGAATAGCGTCTCTCTT+AGG | - | chr4_3:59799559-59799578 | None:intergenic | 45.0% | |
| ! | TGGTGCTGGAGTTACAATTG+AGG | + | chr4_3:59799612-59799631 | Msa0652090:CDS | 45.0% |
| CCTCCTCATCTTGAGATACA+AGG | - | chr4_3:59799672-59799691 | None:intergenic | 45.0% | |
| CCTTGTATCTCAAGATGAGG+AGG | + | chr4_3:59799669-59799688 | Msa0652090:CDS | 45.0% | |
| GATGAGGAGGACATTGAAAG+TGG | + | chr4_3:59799682-59799701 | Msa0652090:CDS | 45.0% | |
| TGAGGAGGACATTGAAAGTG+GGG | + | chr4_3:59799684-59799703 | Msa0652090:CDS | 45.0% | |
| TGACCTACTCAACCTCTTCA+AGG | + | chr4_3:59799776-59799795 | Msa0652090:CDS | 45.0% | |
| TCACCTTGAAGAGGTTGAGT+AGG | - | chr4_3:59799782-59799801 | None:intergenic | 45.0% | |
| CTTCGACATCTACAGCACAT+TGG | - | chr4_3:59800018-59800037 | None:intergenic | 45.0% | |
| CTGTAGATGTCGAAGAACAG+AGG | + | chr4_3:59800023-59800042 | Msa0652090:intron | 45.0% | |
| ACTAACTCGTAGTCGCAACA+AGG | + | chr4_3:59800046-59800065 | Msa0652090:CDS | 45.0% | |
| CTGTCCCTTGCGATTCTTAA+CGG | - | chr4_3:59800222-59800241 | None:intergenic | 45.0% | |
| ! | GACAGGTTCAGAGTATCAGA+AGG | + | chr4_3:59800237-59800256 | Msa0652090:CDS | 45.0% |
| AGAAGGCCAAATGCACCTTA+TGG | + | chr4_3:59800254-59800273 | Msa0652090:CDS | 45.0% | |
| AACCTCATCACCTGCTTAGA+TGG | + | chr4_3:59800388-59800407 | Msa0652090:three_prime_UTR | 45.0% | |
| ACCTCATCACCTGCTTAGAT+GGG | + | chr4_3:59800389-59800408 | Msa0652090:three_prime_UTR | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr4_3:59800528-59800547 | None:intergenic | 45.0% |
| GCTACAGACTTCACTGCTCT+TGG | - | chr4_3:59792220-59792239 | None:intergenic | 50.0% | |
| TAACTAGGTTGCTGTGTGCG+AGG | - | chr4_3:59792242-59792261 | None:intergenic | 50.0% | |
| AGAATGGCGAAGAAAGGAGG+AGG | + | chr4_3:59792423-59792442 | Msa0652090:exon | 50.0% | |
| ! | GGCAAGGAGAAGGGCTTTAT+TGG | + | chr4_3:59792916-59792935 | Msa0652090:CDS | 50.0% |
| TGTGGAAACCGACCATGCTT+AGG | - | chr4_3:59793681-59793700 | None:intergenic | 50.0% | |
| GCCAAGATAGTCACGATGCT+AGG | + | chr4_3:59794601-59794620 | Msa0652090:intron | 50.0% | |
| GTGGATGCATGTCTACCTTG+AGG | + | chr4_3:59794738-59794757 | Msa0652090:intron | 50.0% | |
| ATTGCCGGAAAATGGTTCCG+AGG | + | chr4_3:59795256-59795275 | Msa0652090:intron | 50.0% | |
| !! | ATGATCGACTTGCTGCCCTT+CGG | - | chr4_3:59795859-59795878 | None:intergenic | 50.0% |
| AGCTCGCCTTGAAGAGATCA+AGG | + | chr4_3:59795890-59795909 | Msa0652090:CDS | 50.0% | |
| !! | GCTTTGATTGGGTTGAAGGC+CGG | - | chr4_3:59796156-59796175 | None:intergenic | 50.0% |
| CGCTAACCCAGTGCTTTGAT+TGG | - | chr4_3:59796168-59796187 | None:intergenic | 50.0% | |
| CTAACAGTGACCAGGTCATG+CGG | - | chr4_3:59796203-59796222 | None:intergenic | 50.0% | |
| ! | TCAGTAGCAACCTGGGTTGA+CGG | + | chr4_3:59796626-59796645 | Msa0652090:intron | 50.0% |
| AGCTGATCCGATGACTGTAC+CGG | + | chr4_3:59796709-59796728 | Msa0652090:intron | 50.0% | |
| TCACATTGGCGTGCAGAGTT+CGG | + | chr4_3:59797853-59797872 | Msa0652090:CDS | 50.0% | |
| AAGCGTTCGAGACCAGCTAA+TGG | + | chr4_3:59797965-59797984 | Msa0652090:CDS | 50.0% | |
| AGCGTTCGAGACCAGCTAAT+GGG | + | chr4_3:59797966-59797985 | Msa0652090:CDS | 50.0% | |
| TGGGACGGGTCTTCTTCTTT+CGG | + | chr4_3:59798305-59798324 | Msa0652090:intron | 50.0% | |
| CACTTAACACTTCCACCTGC+CGG | + | chr4_3:59798577-59798596 | Msa0652090:intron | 50.0% | |
| TTGATAAGGTTTCCGGCAGG+TGG | - | chr4_3:59798592-59798611 | None:intergenic | 50.0% | |
| ATCCACGCTAAGTGTGTAGG+CGG | - | chr4_3:59798722-59798741 | None:intergenic | 50.0% | |
| TAAGGGTAGCAATGTGGGGA+TGG | - | chr4_3:59798752-59798771 | None:intergenic | 50.0% | |
| GATACCACTGTTGGGACTTC+CGG | + | chr4_3:59798782-59798801 | Msa0652090:intron | 50.0% | |
| ATACCACTGTTGGGACTTCC+GGG | + | chr4_3:59798783-59798802 | Msa0652090:intron | 50.0% | |
| ! | ACAAGTGTTTAAGGCTCCCC+CGG | - | chr4_3:59798804-59798823 | None:intergenic | 50.0% |
| GGGAGCCTTAAACACTTGTG+TGG | + | chr4_3:59798805-59798824 | Msa0652090:intron | 50.0% | |
| CAACGTAGTGAAGAGCAGTG+GGG | + | chr4_3:59798869-59798888 | Msa0652090:intron | 50.0% | |
| GAGACGCTATTCGTGAACGA+CGG | + | chr4_3:59799563-59799582 | Msa0652090:CDS | 50.0% | |
| AGACGCTATTCGTGAACGAC+GGG | + | chr4_3:59799564-59799583 | Msa0652090:CDS | 50.0% | |
| GACGGGAAAGACATGAGAAG+CGG | + | chr4_3:59799581-59799600 | Msa0652090:CDS | 50.0% | |
| ACGGGAAAGACATGAGAAGC+GGG | + | chr4_3:59799582-59799601 | Msa0652090:CDS | 50.0% | |
| AAGACATGAGAAGCGGGTGA+TGG | + | chr4_3:59799588-59799607 | Msa0652090:CDS | 50.0% | |
| GAGGAGGACATTGAAAGTGG+GGG | + | chr4_3:59799685-59799704 | Msa0652090:CDS | 50.0% | |
| AGCTGCAAAACGCTCTGCAA+AGG | + | chr4_3:59799750-59799769 | Msa0652090:CDS | 50.0% | |
| !! | AATTTTGGAGGCCGTTTGCC+TGG | + | chr4_3:59799802-59799821 | Msa0652090:intron | 50.0% |
| !! | ATTTTGGAGGCCGTTTGCCT+GGG | + | chr4_3:59799803-59799822 | Msa0652090:intron | 50.0% |
| ACAGTCTCCTCTGGCAAAGA+GGG | - | chr4_3:59799892-59799911 | None:intergenic | 50.0% | |
| CGTTAAGAATCGCAAGGGAC+AGG | + | chr4_3:59800220-59800239 | Msa0652090:CDS | 50.0% | |
| AGGCCAAATGCACCTTATGG+CGG | + | chr4_3:59800257-59800276 | Msa0652090:CDS | 50.0% | |
| AGTTACACGCCCATCTAAGC+AGG | - | chr4_3:59800401-59800420 | None:intergenic | 50.0% | |
| !! | CGCAGTTGGGAGGGGTATTA+GGG | - | chr4_3:59792282-59792301 | None:intergenic | 55.0% |
| ! | CAGGGGAGTGCAACGTAAGA+CGG | - | chr4_3:59792308-59792327 | None:intergenic | 55.0% |
| CTCGTCGTCCATGTCTTCAG+TGG | - | chr4_3:59792514-59792533 | None:intergenic | 55.0% | |
| ! | GGAGGAAGACGATGATGACG+AGG | + | chr4_3:59792879-59792898 | Msa0652090:CDS | 55.0% |
| ! | AAGTGATGACGAGGCCCCAA+AGG | + | chr4_3:59793515-59793534 | Msa0652090:CDS | 55.0% |
| TGCATGTCTACCTTGAGGGC+AGG | + | chr4_3:59794743-59794762 | Msa0652090:intron | 55.0% | |
| GGATTCAACACCTGCCCTCA+AGG | - | chr4_3:59794756-59794775 | None:intergenic | 55.0% | |
| ! | CCGACCTCGGAACCATTTTC+CGG | - | chr4_3:59795263-59795282 | None:intergenic | 55.0% |
| CCGGAAAATGGTTCCGAGGT+CGG | + | chr4_3:59795260-59795279 | Msa0652090:intron | 55.0% | |
| GAAAATGGTTCCGAGGTCGG+TGG | + | chr4_3:59795263-59795282 | Msa0652090:intron | 55.0% | |
| ! | ATTCTAGAGGCCACCGACCT+CGG | - | chr4_3:59795276-59795295 | None:intergenic | 55.0% |
| TCACAGGGTCCCCAATGTCT+CGG | - | chr4_3:59795438-59795457 | None:intergenic | 55.0% | |
| GCCCTTCGGACTTGAGTAGA+AGG | - | chr4_3:59795845-59795864 | None:intergenic | 55.0% | |
| AATCGGGGGTGGAAGAATGC+AGG | - | chr4_3:59796535-59796554 | None:intergenic | 55.0% | |
| ATCCGATGACTGTACCGGAC+CGG | + | chr4_3:59796714-59796733 | Msa0652090:intron | 55.0% | |
| ACCTGACATAACTGCCGGTC+CGG | - | chr4_3:59796731-59796750 | None:intergenic | 55.0% | |
| CCAGGACCTGACATAACTGC+CGG | - | chr4_3:59796736-59796755 | None:intergenic | 55.0% | |
| GCGATAGAATCGGCTGGCAT+TGG | - | chr4_3:59797498-59797517 | None:intergenic | 55.0% | |
| GGTGATTCAGCAGAGACCAG+AGG | - | chr4_3:59797537-59797556 | None:intergenic | 55.0% | |
| ! | GTGGTTGTTAATGGGCCAGC+TGG | + | chr4_3:59798105-59798124 | Msa0652090:CDS | 55.0% |
| GTGGTTGGACACCCTCGTAT+GGG | - | chr4_3:59798641-59798660 | None:intergenic | 55.0% | |
| TGTGGTTGGACACCCTCGTA+TGG | - | chr4_3:59798642-59798661 | None:intergenic | 55.0% | |
| TCCACGCTAAGTGTGTAGGC+GGG | - | chr4_3:59798721-59798740 | None:intergenic | 55.0% | |
| TACCACTGTTGGGACTTCCG+GGG | + | chr4_3:59798784-59798803 | Msa0652090:intron | 55.0% | |
| TTGTTGAGCTAGGTGCGAGG+AGG | + | chr4_3:59798921-59798940 | Msa0652090:intron | 55.0% | |
| CTTACAGGCCGACGTGGTAA+GGG | + | chr4_3:59799000-59799019 | Msa0652090:intron | 55.0% | |
| !! | CATGAGAAGCGGGTGATGGA+TGG | + | chr4_3:59799592-59799611 | Msa0652090:CDS | 55.0% |
| CAGTCTCCTCTGGCAAAGAG+GGG | - | chr4_3:59799891-59799910 | None:intergenic | 55.0% | |
| CACAGTCTCCTCTGGCAAAG+AGG | - | chr4_3:59799893-59799912 | None:intergenic | 55.0% | |
| CTCTTTGCCAGAGGAGACTG+TGG | + | chr4_3:59799891-59799910 | Msa0652090:CDS | 55.0% | |
| TTGCCAGAGGAGACTGTGGA+CGG | + | chr4_3:59799895-59799914 | Msa0652090:CDS | 55.0% | |
| TTTCCGTCCACAGTCTCCTC+TGG | - | chr4_3:59799901-59799920 | None:intergenic | 55.0% | |
| GGCCAAATGCACCTTATGGC+GGG | + | chr4_3:59800258-59800277 | Msa0652090:CDS | 55.0% | |
| GCCAAATGCACCTTATGGCG+GGG | + | chr4_3:59800259-59800278 | Msa0652090:CDS | 55.0% | |
| TCCCCGCCATAAGGTGCATT+TGG | - | chr4_3:59800263-59800282 | None:intergenic | 55.0% | |
| GCCCATCTAAGCAGGTGATG+AGG | - | chr4_3:59800393-59800412 | None:intergenic | 55.0% | |
| !! | GCGCAGTTGGGAGGGGTATT+AGG | - | chr4_3:59792283-59792302 | None:intergenic | 60.0% |
| ! | GGGAGTGCAACGTAAGACGG+CGG | - | chr4_3:59792305-59792324 | None:intergenic | 60.0% |
| TGACGAGGCCCCAAAGGAAG+AGG | + | chr4_3:59793521-59793540 | Msa0652090:CDS | 60.0% | |
| GAGACATTGGGGACCCTGTG+AGG | + | chr4_3:59795437-59795456 | Msa0652090:intron | 60.0% | |
| !! | GATTGGGTTGAAGGCCGGTC+TGG | - | chr4_3:59796151-59796170 | None:intergenic | 60.0% |
| !! | AAGCACTGGGTTAGCGGCTG+CGG | + | chr4_3:59796172-59796191 | Msa0652090:intron | 60.0% |
| TGCCGGTCCGGTACAGTCAT+CGG | - | chr4_3:59796719-59796738 | None:intergenic | 60.0% | |
| ACCGGACCGGCAGTTATGTC+AGG | + | chr4_3:59796727-59796746 | Msa0652090:intron | 60.0% | |
| CCGGCAGTTATGTCAGGTCC+TGG | + | chr4_3:59796733-59796752 | Msa0652090:intron | 60.0% | |
| ACCCGCCTACACACTTAGCG+TGG | + | chr4_3:59798717-59798736 | Msa0652090:intron | 60.0% | |
| ACCACTGTTGGGACTTCCGG+GGG | + | chr4_3:59798785-59798804 | Msa0652090:intron | 60.0% | |
| CGTAGTGAAGAGCAGTGGGG+CGG | + | chr4_3:59798872-59798891 | Msa0652090:intron | 60.0% | |
| GTAGTGAAGAGCAGTGGGGC+GGG | + | chr4_3:59798873-59798892 | Msa0652090:intron | 60.0% | |
| CGGTTGTTGAGCTAGGTGCG+AGG | + | chr4_3:59798918-59798937 | Msa0652090:intron | 60.0% | |
| AGTGGCCCACCTCACCTTAC+AGG | + | chr4_3:59798985-59799004 | Msa0652090:intron | 60.0% | |
| GTCGGCCTGTAAGGTGAGGT+GGG | - | chr4_3:59798993-59799012 | None:intergenic | 60.0% | |
| CCTTACCACGTCGGCCTGTA+AGG | - | chr4_3:59799002-59799021 | None:intergenic | 60.0% | |
| CCTTACAGGCCGACGTGGTA+AGG | + | chr4_3:59798999-59799018 | Msa0652090:intron | 60.0% | |
| !! | AAGCGGGTGATGGATGGTGC+TGG | + | chr4_3:59799598-59799617 | Msa0652090:CDS | 60.0% |
| AGCTGTCCCCTCTTTGCCAG+AGG | + | chr4_3:59799882-59799901 | Msa0652090:CDS | 60.0% | |
| ! | CCAGTGGATTCCCCGCCATA+AGG | - | chr4_3:59800272-59800291 | None:intergenic | 60.0% |
| ! | CCTTATGGCGGGGAATCCAC+TGG | + | chr4_3:59800269-59800288 | Msa0652090:CDS | 60.0% |
| CGTAAGACGGCGGCGCAGTT+GGG | - | chr4_3:59792295-59792314 | None:intergenic | 65.0% | |
| ACGTAAGACGGCGGCGCAGT+TGG | - | chr4_3:59792296-59792315 | None:intergenic | 65.0% | |
| CACTGATGAGGACGGCGACG+AGG | + | chr4_3:59792858-59792877 | Msa0652090:CDS | 65.0% | |
| TGATGAGGACGGCGACGAGG+AGG | + | chr4_3:59792861-59792880 | Msa0652090:CDS | 65.0% | |
| TGCGGTCACACCGCATGACC+TGG | + | chr4_3:59796190-59796209 | Msa0652090:intron | 65.0% | |
| TCCCCCGGAAGTCCCAACAG+TGG | - | chr4_3:59798789-59798808 | None:intergenic | 65.0% | |
| CGTCGGCCTGTAAGGTGAGG+TGG | - | chr4_3:59798994-59799013 | None:intergenic | 65.0% | |
| CCACGTCGGCCTGTAAGGTG+AGG | - | chr4_3:59798997-59799016 | None:intergenic | 65.0% | |
| CCTCACCTTACAGGCCGACG+TGG | + | chr4_3:59798994-59799013 | Msa0652090:intron | 65.0% | |
| AGACGGCGGCGCAGTTGGGA+GGG | - | chr4_3:59792291-59792310 | None:intergenic | 70.0% | |
| AAGACGGCGGCGCAGTTGGG+AGG | - | chr4_3:59792292-59792311 | None:intergenic | 70.0% | |
| GTGAAGAGCAGTGGGGCGGG+AGG | + | chr4_3:59798876-59798895 | Msa0652090:intron | 70.0% | |
| AAGAGCAGTGGGGCGGGAGG+AGG | + | chr4_3:59798879-59798898 | Msa0652090:intron | 70.0% | |
| AGAGCAGTGGGGCGGGAGGA+GGG | + | chr4_3:59798880-59798899 | Msa0652090:intron | 70.0% | |
| GACGGCGGCGCAGTTGGGAG+GGG | - | chr4_3:59792290-59792309 | None:intergenic | 75.0% | |
| ! | GCAGTGGGGCGGGAGGAGGG+AGG | + | chr4_3:59798883-59798902 | Msa0652090:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 59792196 | 59800595 | 59792196 | ID=Msa0652090;Name=Msa0652090 |
| chr4_3 | mRNA | 59792196 | 59800595 | 59792196 | ID=Msa0652090-mRNA-1;Parent=Msa0652090;Name=Msa0652090-mRNA-1;_AED=0.07;_eAED=0.07;_QI=230|1|1|1|1|1|16|261|657 |
| chr4_3 | exon | 59792196 | 59792543 | 59792196 | ID=Msa0652090-mRNA-1:exon:16098;Parent=Msa0652090-mRNA-1 |
| chr4_3 | exon | 59792639 | 59792730 | 59792639 | ID=Msa0652090-mRNA-1:exon:16099;Parent=Msa0652090-mRNA-1 |
| chr4_3 | exon | 59792841 | 59792943 | 59792841 | ID=Msa0652090-mRNA-1:exon:16100;Parent=Msa0652090-mRNA-1 |
| chr4_3 | exon | 59793246 | 59793385 | 59793246 | ID=Msa0652090-mRNA-1:exon:16101;Parent=Msa0652090-mRNA-1 |
| chr4_3 | exon | 59793507 | 59793644 | 59793507 | ID=Msa0652090-mRNA-1:exon:16102;Parent=Msa0652090-mRNA-1 |
| chr4_3 | exon | 59793775 | 59793854 | 59793775 | ID=Msa0652090-mRNA-1:exon:16103;Parent=Msa0652090-mRNA-1 |
| chr4_3 | exon | 59794947 | 59795034 | 59794947 | ID=Msa0652090-mRNA-1:exon:16104;Parent=Msa0652090-mRNA-1 |
| chr4_3 | exon | 59795747 | 59795926 | 59795747 | ID=Msa0652090-mRNA-1:exon:16105;Parent=Msa0652090-mRNA-1 |
| chr4_3 | exon | 59797396 | 59797569 | 59797396 | ID=Msa0652090-mRNA-1:exon:16106;Parent=Msa0652090-mRNA-1 |
| chr4_3 | exon | 59797673 | 59797750 | 59797673 | ID=Msa0652090-mRNA-1:exon:16107;Parent=Msa0652090-mRNA-1 |
| chr4_3 | exon | 59797848 | 59797987 | 59797848 | ID=Msa0652090-mRNA-1:exon:16108;Parent=Msa0652090-mRNA-1 |
| chr4_3 | exon | 59798071 | 59798182 | 59798071 | ID=Msa0652090-mRNA-1:exon:16109;Parent=Msa0652090-mRNA-1 |
| chr4_3 | exon | 59799532 | 59799797 | 59799532 | ID=Msa0652090-mRNA-1:exon:16110;Parent=Msa0652090-mRNA-1 |
| chr4_3 | exon | 59799876 | 59799939 | 59799876 | ID=Msa0652090-mRNA-1:exon:16111;Parent=Msa0652090-mRNA-1 |
| chr4_3 | exon | 59800029 | 59800097 | 59800029 | ID=Msa0652090-mRNA-1:exon:16112;Parent=Msa0652090-mRNA-1 |
| chr4_3 | exon | 59800203 | 59800595 | 59800203 | ID=Msa0652090-mRNA-1:exon:16113;Parent=Msa0652090-mRNA-1 |
| chr4_3 | five_prime_UTR | 59792196 | 59792425 | 59792196 | ID=Msa0652090-mRNA-1:five_prime_utr;Parent=Msa0652090-mRNA-1 |
| chr4_3 | CDS | 59792426 | 59792543 | 59792426 | ID=Msa0652090-mRNA-1:cds;Parent=Msa0652090-mRNA-1 |
| chr4_3 | CDS | 59792639 | 59792730 | 59792639 | ID=Msa0652090-mRNA-1:cds;Parent=Msa0652090-mRNA-1 |
| chr4_3 | CDS | 59792841 | 59792943 | 59792841 | ID=Msa0652090-mRNA-1:cds;Parent=Msa0652090-mRNA-1 |
| chr4_3 | CDS | 59793246 | 59793385 | 59793246 | ID=Msa0652090-mRNA-1:cds;Parent=Msa0652090-mRNA-1 |
| chr4_3 | CDS | 59793507 | 59793644 | 59793507 | ID=Msa0652090-mRNA-1:cds;Parent=Msa0652090-mRNA-1 |
| chr4_3 | CDS | 59793775 | 59793854 | 59793775 | ID=Msa0652090-mRNA-1:cds;Parent=Msa0652090-mRNA-1 |
| chr4_3 | CDS | 59794947 | 59795034 | 59794947 | ID=Msa0652090-mRNA-1:cds;Parent=Msa0652090-mRNA-1 |
| chr4_3 | CDS | 59795747 | 59795926 | 59795747 | ID=Msa0652090-mRNA-1:cds;Parent=Msa0652090-mRNA-1 |
| chr4_3 | CDS | 59797396 | 59797569 | 59797396 | ID=Msa0652090-mRNA-1:cds;Parent=Msa0652090-mRNA-1 |
| chr4_3 | CDS | 59797673 | 59797750 | 59797673 | ID=Msa0652090-mRNA-1:cds;Parent=Msa0652090-mRNA-1 |
| chr4_3 | CDS | 59797848 | 59797987 | 59797848 | ID=Msa0652090-mRNA-1:cds;Parent=Msa0652090-mRNA-1 |
| chr4_3 | CDS | 59798071 | 59798182 | 59798071 | ID=Msa0652090-mRNA-1:cds;Parent=Msa0652090-mRNA-1 |
| chr4_3 | CDS | 59799532 | 59799797 | 59799532 | ID=Msa0652090-mRNA-1:cds;Parent=Msa0652090-mRNA-1 |
| chr4_3 | CDS | 59799876 | 59799939 | 59799876 | ID=Msa0652090-mRNA-1:cds;Parent=Msa0652090-mRNA-1 |
| chr4_3 | CDS | 59800029 | 59800097 | 59800029 | ID=Msa0652090-mRNA-1:cds;Parent=Msa0652090-mRNA-1 |
| chr4_3 | CDS | 59800203 | 59800334 | 59800203 | ID=Msa0652090-mRNA-1:cds;Parent=Msa0652090-mRNA-1 |
| chr4_3 | three_prime_UTR | 59800335 | 59800595 | 59800335 | ID=Msa0652090-mRNA-1:three_prime_utr;Parent=Msa0652090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
