Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0694650 | XP_003608060.1 | 93.665 | 663 | 26 | 5 | 1 | 657 | 1 | 653 | 0.0 | 1131 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0694650 | sp|Q8L3P4|THAL_ARATH | 42.158 | 695 | 321 | 19 | 1 | 655 | 1 | 654 | 2.05e-121 | 378 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0694650 | G7JNK9 | 93.665 | 663 | 26 | 5 | 1 | 657 | 1 | 653 | 0.0 | 1131 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0072570 | Msa0694650 | 0.821102 | 4.826986e-53 | -8.615850e-47 |
| Msa0652090 | Msa0694650 | 0.996695 | 6.094314e-231 | -8.615850e-47 |
| Msa0694650 | Msa1054280 | 0.826739 | 2.299394e-54 | -8.615850e-47 |
| Msa0694650 | Msa1082170 | 0.811206 | 7.860980e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0694650 | MtrunA17_Chr4g0045541 | 93.665 | 663 | 26 | 5 | 1 | 657 | 1 | 653 | 0.0 | 1131 |
| Msa0694650 | MtrunA17_Chr5g0447351 | 61.826 | 241 | 63 | 4 | 423 | 657 | 12 | 229 | 3.73e-81 | 256 |
| Msa0694650 | MtrunA17_Chr3g0132641 | 31.193 | 109 | 74 | 1 | 224 | 332 | 16 | 123 | 8.01e-14 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0694650 | AT2G43650.1 | 42.158 | 695 | 321 | 19 | 1 | 655 | 1 | 654 | 2.09e-122 | 378 |
| Msa0694650 | AT3G28230.2 | 55.556 | 117 | 49 | 2 | 541 | 657 | 61 | 174 | 1.83e-27 | 109 |
| Msa0694650 | AT3G28230.1 | 55.556 | 117 | 49 | 2 | 541 | 657 | 60 | 173 | 2.06e-27 | 109 |
| Msa0694650 | AT1G07840.2 | 26.119 | 134 | 99 | 0 | 213 | 346 | 4 | 137 | 2.88e-15 | 77.8 |
| Msa0694650 | AT1G07840.1 | 26.119 | 134 | 99 | 0 | 213 | 346 | 4 | 137 | 2.88e-15 | 77.8 |
| Msa0694650 | AT1G07840.3 | 26.119 | 134 | 99 | 0 | 213 | 346 | 4 | 137 | 3.86e-15 | 76.6 |
Find 168 sgRNAs with CRISPR-Local
Find 569 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGCAGTTGGGAGGGGTATT+AGG | 0.124811 | 4_4:-63977774 | None:intergenic |
| ATCTCTTGTGAAGGTTAAAA+AGG | 0.178594 | 4_4:+63981227 | Msa0694650:intron |
| CAATTTCTTCCTCTTCCTTT+GGG | 0.184787 | 4_4:-63979023 | None:intergenic |
| AACATCTTTGGCATATTAAA+TGG | 0.208397 | 4_4:+63985938 | Msa0694650:three_prime_UTR |
| GACAACCAATCAACTAATTC+TGG | 0.211578 | 4_4:-63980447 | None:intergenic |
| GTATTAGGGTTTATGAATTA+TGG | 0.213123 | 4_4:-63977759 | None:intergenic |
| GGCAAGGAGAAGGGCTTTAT+TGG | 0.240030 | 4_4:+63978409 | Msa0694650:CDS |
| GATGATGCTGTGGTTGTTAA+TGG | 0.242057 | 4_4:+63983589 | Msa0694650:CDS |
| GCAATTTCTTCCTCTTCCTT+TGG | 0.261826 | 4_4:-63979024 | None:intergenic |
| AACCTCATCACCTGCTTAGA+TGG | 0.265694 | 4_4:+63985881 | Msa0694650:three_prime_UTR |
| AGCACCTTGTAGTTCTTTCT+AGG | 0.266803 | 4_4:-63985573 | None:intergenic |
| CGCAGTTGGGAGGGGTATTA+GGG | 0.269025 | 4_4:-63977773 | None:intergenic |
| GGACTTGAGTAGAAGGTAAA+AGG | 0.290210 | 4_4:-63981328 | None:intergenic |
| GATTGGAAACTTAACATCTT+TGG | 0.300947 | 4_4:+63985926 | Msa0694650:three_prime_UTR |
| TTCTGTGTTAAGGTGGCTTC+TGG | 0.304844 | 4_4:+63985013 | Msa0694650:intron |
| CTGTCCCTTGCGATTCTTAA+CGG | 0.332149 | 4_4:-63985712 | None:intergenic |
| GTAAAATACCCGAGAGAAAC+TGG | 0.341689 | 4_4:+63977675 | None:intergenic |
| TCTTCAAGGCGAGCTATTAC+AGG | 0.346861 | 4_4:-63981375 | None:intergenic |
| TCACGAATAGCGTCTCTCTT+AGG | 0.351316 | 4_4:-63985049 | None:intergenic |
| GATCAAGGAATTAATGAATC+AGG | 0.364978 | 4_4:+63981398 | Msa0694650:CDS |
| ATCACTACCACTGCTTCTTC+TGG | 0.366961 | 4_4:-63983048 | None:intergenic |
| TCCCCGCCATAAGGTGCATT+TGG | 0.375526 | 4_4:-63985753 | None:intergenic |
| TCAGTCGAAGTATCAGATTC+AGG | 0.375688 | 4_4:+63985799 | Msa0694650:CDS |
| TTAATTCCTTGATCTCTTCA+AGG | 0.381679 | 4_4:-63981389 | None:intergenic |
| TAACTTGTATAATTATTGAT+TGG | 0.392558 | 4_4:+63985909 | Msa0694650:three_prime_UTR |
| AGAATGTCCTCAAGTTCAAC+TGG | 0.400387 | 4_4:-63982913 | None:intergenic |
| AGAAGGCCAAATGCACCTTA+TGG | 0.411416 | 4_4:+63985747 | Msa0694650:CDS |
| ATGATGCTGTGGTTGTTAAT+GGG | 0.413234 | 4_4:+63983590 | Msa0694650:CDS |
| GCCCTTCGGACTTGAGTAGA+AGG | 0.421509 | 4_4:-63981335 | None:intergenic |
| GCTACAGACTTCACTGCTCT+TGG | 0.442289 | 4_4:-63977711 | None:intergenic |
| CTGCCCCAGAATTAGTTGAT+TGG | 0.442694 | 4_4:+63980442 | Msa0694650:CDS |
| GTTGGAAGAAAGCACCGATA+TGG | 0.444169 | 4_4:+63978834 | Msa0694650:CDS |
| GCGATAGAATCGGCTGGCAT+TGG | 0.444797 | 4_4:-63982988 | None:intergenic |
| TTTCCGTCCACAGTCTCCTC+TGG | 0.445026 | 4_4:-63985391 | None:intergenic |
| TCACATTGGCGTGCAGAGTT+CGG | 0.445495 | 4_4:+63983346 | Msa0694650:CDS |
| AAGCGTTCGAGACCAGCTAA+TGG | 0.448914 | 4_4:+63983458 | Msa0694650:CDS |
| TGACCTACTCAACCTCTTCA+AGG | 0.452976 | 4_4:+63985269 | Msa0694650:CDS |
| GACGGCGGCGCAGTTGGGAG+GGG | 0.453532 | 4_4:-63977781 | None:intergenic |
| AAAGTTATAACGGTCGCGTC+GGG | 0.455333 | 4_4:-63977981 | None:intergenic |
| AAAGGTTATAGCTTGGCAAT+AGG | 0.455660 | 4_4:-63981310 | None:intergenic |
| CTTTCGTCTTCTTCAACCTC+CGG | 0.457947 | 4_4:+63977834 | Msa0694650:five_prime_UTR |
| TACGATTATCAGCACCATAT+CGG | 0.458890 | 4_4:-63978848 | None:intergenic |
| CGTAAGACGGCGGCGCAGTT+GGG | 0.459054 | 4_4:-63977786 | None:intergenic |
| TACCCGAGAGAAACTGGTTC+GGG | 0.462506 | 4_4:+63977681 | None:intergenic |
| GTTTGGTTTGTTTAGTAATG+AGG | 0.465212 | 4_4:+63978724 | Msa0694650:intron |
| AGGAAGAAAAGTAAAAGATC+AGG | 0.465275 | 4_4:+63983222 | Msa0694650:CDS |
| ACAACCAATCAACTAATTCT+GGG | 0.466223 | 4_4:-63980446 | None:intergenic |
| GGCCAAATGCACCTTATGGC+GGG | 0.470614 | 4_4:+63985751 | Msa0694650:CDS |
| ATAACCTTATCATTGAAAAC+AGG | 0.475949 | 4_4:-63978207 | None:intergenic |
| TGATGATGGTGATGATCAAA+TGG | 0.479990 | 4_4:+63985135 | Msa0694650:CDS |
| GTGGTTGTTAATGGGCCAGC+TGG | 0.481470 | 4_4:+63983598 | Msa0694650:CDS |
| AGCTGCAAAACGCTCTGCAA+AGG | 0.485631 | 4_4:+63985243 | Msa0694650:CDS |
| TTCATCTCAACTACATTGCT+AGG | 0.486326 | 4_4:-63983166 | None:intergenic |
| AGCGTTCGAGACCAGCTAAT+GGG | 0.494581 | 4_4:+63983459 | Msa0694650:CDS |
| AGCTCGCCTTGAAGAGATCA+AGG | 0.498098 | 4_4:+63981383 | Msa0694650:CDS |
| ATGATCGACTTGCTGCCCTT+CGG | 0.498169 | 4_4:-63981349 | None:intergenic |
| CCAGTGGATTCCCCGCCATA+AGG | 0.499092 | 4_4:-63985762 | None:intergenic |
| CCTTATGGCGGGGAATCCAC+TGG | 0.499825 | 4_4:+63985762 | Msa0694650:CDS |
| ACGTAAGACGGCGGCGCAGT+TGG | 0.500239 | 4_4:-63977787 | None:intergenic |
| TATGAATTATGGAGATAACT+AGG | 0.501868 | 4_4:-63977748 | None:intergenic |
| TTCAGATTAGCATTAACAAA+CGG | 0.507994 | 4_4:-63983643 | None:intergenic |
| TTCGTTTATAGCGATAGAAT+CGG | 0.508160 | 4_4:-63982998 | None:intergenic |
| AGACGGCGGCGCAGTTGGGA+GGG | 0.508923 | 4_4:-63977782 | None:intergenic |
| AGCAAATGAACGTTCTGTAT+AGG | 0.509672 | 4_4:+63979326 | Msa0694650:CDS |
| CGTTAAGAATCGCAAGGGAC+AGG | 0.510804 | 4_4:+63985713 | Msa0694650:CDS |
| CAGGTGATGAGGTTCAAAAT+TGG | 0.511895 | 4_4:-63985872 | None:intergenic |
| AATTGCAATAAAAGAACAAA+GGG | 0.514657 | 4_4:+63979041 | Msa0694650:CDS |
| AAGACGGCGGCGCAGTTGGG+AGG | 0.515511 | 4_4:-63977783 | None:intergenic |
| ATACCCGAGAGAAACTGGTT+CGG | 0.516975 | 4_4:+63977680 | None:intergenic |
| AATTTCTTCCTCTTCCTTTG+GGG | 0.517199 | 4_4:-63979022 | None:intergenic |
| GTGATGAGGTTCAAAATTGG+TGG | 0.517459 | 4_4:-63985869 | None:intergenic |
| AAAGCGCTATATCACTTCTC+AGG | 0.520939 | 4_4:+63985411 | Msa0694650:CDS |
| ACCTCATCACCTGCTTAGAT+GGG | 0.523545 | 4_4:+63985882 | Msa0694650:three_prime_UTR |
| ACAGTCTCCTCTGGCAAAGA+GGG | 0.525110 | 4_4:-63985382 | None:intergenic |
| CCTCCTCATCTTGAGATACA+AGG | 0.527251 | 4_4:-63985162 | None:intergenic |
| TAATACAGAATGGCGAAGAA+AGG | 0.532238 | 4_4:+63977911 | Msa0694650:exon |
| TACCTTCTACTCAAGTCCGA+AGG | 0.535029 | 4_4:+63981333 | Msa0694650:CDS |
| AGACGCTATTCGTGAACGAC+GGG | 0.535065 | 4_4:+63985057 | Msa0694650:CDS |
| TGAATATGATGGCAAGGAGA+AGG | 0.537122 | 4_4:+63978399 | Msa0694650:CDS |
| AAGACATGAGAAGCGGGTGA+TGG | 0.538557 | 4_4:+63985081 | Msa0694650:CDS |
| GAAGGTAAAAGGTTATAGCT+TGG | 0.545484 | 4_4:-63981317 | None:intergenic |
| CAGGGGAGTGCAACGTAAGA+CGG | 0.545771 | 4_4:-63977799 | None:intergenic |
| GTGAAGCTATACCCATTAGC+TGG | 0.546075 | 4_4:-63983470 | None:intergenic |
| TGACGAGGCCCCAAAGGAAG+AGG | 0.547359 | 4_4:+63979014 | Msa0694650:CDS |
| TATAAACGAAGAACAGCCTC+TGG | 0.547574 | 4_4:+63983011 | Msa0694650:CDS |
| GGTATTAAGAAAACTATCGT+TGG | 0.551126 | 4_4:+63978816 | Msa0694650:CDS |
| TGAGGAGGACATTGAAAGTG+GGG | 0.551266 | 4_4:+63985177 | Msa0694650:CDS |
| TCCAAAATTTCACCTTGAAG+AGG | 0.553082 | 4_4:-63985281 | None:intergenic |
| TCACCTTGAAGAGGTTGAGT+AGG | 0.554310 | 4_4:-63985272 | None:intergenic |
| CACAGTCTCCTCTGGCAAAG+AGG | 0.555482 | 4_4:-63985383 | None:intergenic |
| AGTTACACGCCCATCTAAGC+AGG | 0.558570 | 4_4:-63985891 | None:intergenic |
| GATAGTTGCATTAATTCCAG+TGG | 0.559627 | 4_4:-63985778 | None:intergenic |
| TAGAACGATATTGTAACGTA+AGG | 0.560055 | 4_4:-63985841 | None:intergenic |
| GAATCAGCATTAATGTCAAG+TGG | 0.560264 | 4_4:-63978156 | None:intergenic |
| CTTCAGTGGAAAAGTTATAA+CGG | 0.561135 | 4_4:-63977991 | None:intergenic |
| CAAGATGAAGAAGACGATGA+AGG | 0.563625 | 4_4:+63978795 | Msa0694650:CDS |
| GATGAGGAGGACATTGAAAG+TGG | 0.563927 | 4_4:+63985175 | Msa0694650:CDS |
| CTCTTTGCCAGAGGAGACTG+TGG | 0.565226 | 4_4:+63985384 | Msa0694650:CDS |
| AAGCGGGTGATGGATGGTGC+TGG | 0.566712 | 4_4:+63985091 | Msa0694650:CDS |
| CATTATCTTCGTCTTCCACA+AGG | 0.570008 | 4_4:-63979098 | None:intergenic |
| GAATATGATGGCAAGGAGAA+GGG | 0.570082 | 4_4:+63978400 | Msa0694650:CDS |
| TGAACTTCCAGTTGAACTTG+AGG | 0.572238 | 4_4:+63982906 | Msa0694650:CDS |
| ATTGAGGATGATAATGATGA+TGG | 0.574706 | 4_4:+63985121 | Msa0694650:CDS |
| ATTCGCAGTTCATAAGCAGA+GGG | 0.581409 | 4_4:+63978125 | Msa0694650:intron |
| GGATCTGAGTGCTTTGTCAA+AGG | 0.583517 | 4_4:+63979300 | Msa0694650:CDS |
| TTACTTGAGACAAGACCAGC+TGG | 0.585973 | 4_4:-63983613 | None:intergenic |
| TAATGTAACTTTCAATGTCG+AGG | 0.587478 | 4_4:+63979279 | Msa0694650:CDS |
| ATGAGGAGGACATTGAAAGT+GGG | 0.587619 | 4_4:+63985176 | Msa0694650:CDS |
| TCAGAATAGAGAGCAAATAC+CGG | 0.589160 | 4_4:-63977853 | None:intergenic |
| AAGTGATGACGAGGCCCCAA+AGG | 0.591250 | 4_4:+63979008 | Msa0694650:CDS |
| TTTATAGCGATAGAATCGGC+TGG | 0.591664 | 4_4:-63982994 | None:intergenic |
| AATCATCATATGTTGCAAGC+TGG | 0.591742 | 4_4:-63983564 | None:intergenic |
| ACCTTCTACTCAAGTCCGAA+GGG | 0.592215 | 4_4:+63981334 | Msa0694650:CDS |
| CTCGTCGTCCATGTCTTCAG+TGG | 0.594619 | 4_4:-63978005 | None:intergenic |
| ACGGGAAAGACATGAGAAGC+GGG | 0.595279 | 4_4:+63985075 | Msa0694650:CDS |
| AAATCAGATTCCTTAAAGGA+TGG | 0.597906 | 4_4:+63983190 | Msa0694650:CDS |
| GGATGATGAATATGATGGCA+AGG | 0.599227 | 4_4:+63978393 | Msa0694650:CDS |
| AGTACTATTCAAGATTTCGC+CGG | 0.601307 | 4_4:+63977879 | Msa0694650:five_prime_UTR |
| GCCAAATGCACCTTATGGCG+GGG | 0.602795 | 4_4:+63985752 | Msa0694650:CDS |
| AAATATTTGAAGTCGTTGCA+TGG | 0.603177 | 4_4:+63978753 | Msa0694650:CDS |
| GATTCGCAGTTCATAAGCAG+AGG | 0.607779 | 4_4:+63978124 | Msa0694650:intron |
| TACAGAATGGCGAAGAAAGG+AGG | 0.608179 | 4_4:+63977914 | Msa0694650:exon |
| ACGAAAGTGAGAAGTAACGC+AGG | 0.610501 | 4_4:-63977818 | None:intergenic |
| CGAAAGTGAGAAGTAACGCA+GGG | 0.611777 | 4_4:-63977817 | None:intergenic |
| TTGCCAGAGGAGACTGTGGA+CGG | 0.612436 | 4_4:+63985388 | Msa0694650:CDS |
| CATGAGAAGCGGGTGATGGA+TGG | 0.612446 | 4_4:+63985085 | Msa0694650:CDS |
| TGCTAATCTGAAGAAACTCA+AGG | 0.616115 | 4_4:+63983654 | Msa0694650:CDS |
| GACAGGTTCAGAGTATCAGA+AGG | 0.617166 | 4_4:+63985730 | Msa0694650:CDS |
| AAATTGCAATAAAAGAACAA+AGG | 0.617287 | 4_4:+63979040 | Msa0694650:CDS |
| CCTTGTATCTCAAGATGAGG+AGG | 0.619208 | 4_4:+63985162 | Msa0694650:CDS |
| TGATGAGGACGGCGACGAGG+AGG | 0.619817 | 4_4:+63978354 | Msa0694650:CDS |
| AAAAGTTATAACGGTCGCGT+CGG | 0.620460 | 4_4:-63977982 | None:intergenic |
| AGGCCAAATGCACCTTATGG+CGG | 0.622008 | 4_4:+63985750 | Msa0694650:CDS |
| AAAAGCCGTTAAGAATCGCA+AGG | 0.624113 | 4_4:+63985707 | Msa0694650:CDS |
| AGCTGTCCCCTCTTTGCCAG+AGG | 0.625555 | 4_4:+63985375 | Msa0694650:CDS |
| GGGGAAATAGTTATGGAAGG+AGG | 0.627308 | 4_4:+63981249 | Msa0694650:CDS |
| TAACTAGGTTGCTGTGTGCG+AGG | 0.627819 | 4_4:-63977733 | None:intergenic |
| GACGAGGATGATGAATATGA+TGG | 0.633701 | 4_4:+63978388 | Msa0694650:CDS |
| CACTGATGAGGACGGCGACG+AGG | 0.635380 | 4_4:+63978351 | Msa0694650:CDS |
| AGAATGGCGAAGAAAGGAGG+AGG | 0.635908 | 4_4:+63977917 | Msa0694650:exon |
| GCCCATCTAAGCAGGTGATG+AGG | 0.636843 | 4_4:-63985883 | None:intergenic |
| GACGGGAAAGACATGAGAAG+CGG | 0.637750 | 4_4:+63985074 | Msa0694650:CDS |
| TCTGAGTGCTTTGTCAAAGG+AGG | 0.637865 | 4_4:+63979303 | Msa0694650:CDS |
| CAACCAATCAACTAATTCTG+GGG | 0.649259 | 4_4:-63980445 | None:intergenic |
| CAGTCTCCTCTGGCAAAGAG+GGG | 0.652096 | 4_4:-63985381 | None:intergenic |
| AAAAGTTAGAGCTTCCCTTG+AGG | 0.652712 | 4_4:+63983376 | Msa0694650:CDS |
| TGACCTTGTATCTCAAGATG+AGG | 0.653742 | 4_4:+63985159 | Msa0694650:CDS |
| CTGTAGATGTCGAAGAACAG+AGG | 0.656488 | 4_4:+63985516 | Msa0694650:intron |
| GAGGAGGACATTGAAAGTGG+GGG | 0.657844 | 4_4:+63985178 | Msa0694650:CDS |
| GAGACGCTATTCGTGAACGA+CGG | 0.665395 | 4_4:+63985056 | Msa0694650:CDS |
| GAATAGAGAGCAAATACCGG+AGG | 0.665723 | 4_4:-63977850 | None:intergenic |
| GAAAGCAAAACAATATACAG+AGG | 0.665792 | 4_4:+63979065 | Msa0694650:CDS |
| GAATCCTAGAAAGAACTACA+AGG | 0.667921 | 4_4:+63985569 | Msa0694650:CDS |
| TTGCATGGTGGAGATGAAGA+CGG | 0.669329 | 4_4:+63978768 | Msa0694650:CDS |
| TGAATCACCAGAAGAAGCAG+TGG | 0.672149 | 4_4:+63983041 | Msa0694650:CDS |
| AAAGCCGTTAAGAATCGCAA+GGG | 0.675175 | 4_4:+63985708 | Msa0694650:CDS |
| ACTAACTCGTAGTCGCAACA+AGG | 0.675677 | 4_4:+63985539 | Msa0694650:CDS |
| GGTGATTCAGCAGAGACCAG+AGG | 0.679046 | 4_4:-63983027 | None:intergenic |
| ACATGGCAGAAGGATCACAT+TGG | 0.681753 | 4_4:+63983332 | Msa0694650:intron |
| GGAGGAAGACGATGATGACG+AGG | 0.686645 | 4_4:+63978372 | Msa0694650:CDS |
| TGGTGCTGGAGTTACAATTG+AGG | 0.686836 | 4_4:+63985105 | Msa0694650:CDS |
| TATTTGAAGTCGTTGCATGG+TGG | 0.689833 | 4_4:+63978756 | Msa0694650:CDS |
| GCTACAATCAAGTGATGACG+AGG | 0.691085 | 4_4:+63978999 | Msa0694650:intron |
| TGATAATGATGACACTGATG+AGG | 0.699842 | 4_4:+63978339 | Msa0694650:CDS |
| AATGATGACACTGATGAGGA+CGG | 0.705449 | 4_4:+63978343 | Msa0694650:CDS |
| GGGAGTGCAACGTAAGACGG+CGG | 0.709406 | 4_4:-63977796 | None:intergenic |
| GAAAGTGAGAAGTAACGCAG+GGG | 0.721608 | 4_4:-63977816 | None:intergenic |
| TTGGTTGTCAGAATTAAACG+AGG | 0.733976 | 4_4:+63980461 | Msa0694650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTAAATTAAATCATAAAAT+AGG | - | chr4_4:63981015-63981034 | None:intergenic | 10.0% |
| !! | TCTAAATTAAATCATAAAAT+AGG | - | chr4_4:63981015-63981034 | None:intergenic | 10.0% |
| !! | AAATAAGACATAAATATATA+AGG | - | chr4_4:63983089-63983108 | None:intergenic | 10.0% |
| !!! | ATAATCAAATTTTAATCATC+AGG | - | chr4_4:63978057-63978076 | None:intergenic | 15.0% |
| !! | TAAAAAAACAAAATCAGATT+TGG | - | chr4_4:63978240-63978259 | None:intergenic | 15.0% |
| !!! | AATGTTTTAGATATTAAACA+CGG | - | chr4_4:63978918-63978937 | None:intergenic | 15.0% |
| !!! | TAATGAGAAATTAACTTTTA+AGG | + | chr4_4:63979116-63979135 | Msa0694650:CDS | 15.0% |
| !!! | GTAATCTTTTATATTTTTAC+AGG | + | chr4_4:63979246-63979265 | Msa0694650:intron | 15.0% |
| !!! | TTTTCTTTTTCAATCAATTT+TGG | - | chr4_4:63979778-63979797 | None:intergenic | 15.0% |
| !! | ATAACATATTAAGAAACTAT+GGG | + | chr4_4:63981725-63981744 | Msa0694650:intron | 15.0% |
| !!! | TTTTTTTTATATCATAGCAT+TGG | + | chr4_4:63981757-63981776 | Msa0694650:intron | 15.0% |
| !! | AATTCATTAATGAAATAAAC+TGG | + | chr4_4:63982518-63982537 | Msa0694650:intron | 15.0% |
| !!! | ATTTTATTTATCGTTGTAAA+AGG | + | chr4_4:63983284-63983303 | Msa0694650:intron | 15.0% |
| !! | TAATGGTGTAAATTAAAATT+TGG | - | chr4_4:63984568-63984587 | None:intergenic | 15.0% |
| !!! | TAACTTGTATAATTATTGAT+TGG | + | chr4_4:63985909-63985928 | Msa0694650:three_prime_UTR | 15.0% |
| !!! | CATTTTGAAACAAATTTTTT+TGG | - | chr4_4:63986050-63986069 | None:intergenic | 15.0% |
| !!! | TGATTTTTTTTTCTCTTTAC+AGG | + | chr4_4:63978312-63978331 | Msa0694650:intron | 20.0% |
| !!! | TTAATTTCCTTTGTTACTTT+TGG | + | chr4_4:63978649-63978668 | Msa0694650:intron | 20.0% |
| !! | TAAAGTCGAATTTATTCAAA+AGG | + | chr4_4:63978679-63978698 | Msa0694650:intron | 20.0% |
| !! | TTCTGATAAATATACATGTT+TGG | + | chr4_4:63978707-63978726 | Msa0694650:intron | 20.0% |
| !! | TTTGAGCATAATATTTGTAA+AGG | + | chr4_4:63978886-63978905 | Msa0694650:intron | 20.0% |
| !! | AGAGAAACAATAAAAAGTAA+GGG | - | chr4_4:63978953-63978972 | None:intergenic | 20.0% |
| !! | AAGAGAAACAATAAAAAGTA+AGG | - | chr4_4:63978954-63978973 | None:intergenic | 20.0% |
| !! | AAATTGCAATAAAAGAACAA+AGG | + | chr4_4:63979040-63979059 | Msa0694650:CDS | 20.0% |
| !! | AATTGCAATAAAAGAACAAA+GGG | + | chr4_4:63979041-63979060 | Msa0694650:CDS | 20.0% |
| !!! | TCATTTTTTCAGTTTCAATT+TGG | - | chr4_4:63979524-63979543 | None:intergenic | 20.0% |
| !!! | TCTAAAATTCAAAGTTGTTT+AGG | - | chr4_4:63979557-63979576 | None:intergenic | 20.0% |
| !!! | TAAACAACTTTGAATTTTAG+AGG | + | chr4_4:63979556-63979575 | Msa0694650:intron | 20.0% |
| !! | TGTATATACTCAAGATATTA+AGG | + | chr4_4:63979696-63979715 | Msa0694650:intron | 20.0% |
| !!! | GTCATTTCTAATCATTTTTT+CGG | - | chr4_4:63979752-63979771 | None:intergenic | 20.0% |
| !! | AAAAAGAAAAGAATGTAAGA+AGG | + | chr4_4:63979788-63979807 | Msa0694650:intron | 20.0% |
| !!! | ATAATTTTCATTTTGTGAAG+CGG | + | chr4_4:63979994-63980013 | Msa0694650:intron | 20.0% |
| !! | AATTCAGCATAGAAAAATAT+GGG | - | chr4_4:63980339-63980358 | None:intergenic | 20.0% |
| !! | AAAAGAAAACTATTGTCTAT+AGG | - | chr4_4:63981135-63981154 | None:intergenic | 20.0% |
| !! | TTATTTATGTTGTTCTACTT+GGG | + | chr4_4:63981164-63981183 | Msa0694650:intron | 20.0% |
| !! | TAAATTGTAACACAACAATA+TGG | - | chr4_4:63981203-63981222 | None:intergenic | 20.0% |
| !! | CATAACATATTAAGAAACTA+TGG | + | chr4_4:63981724-63981743 | Msa0694650:intron | 20.0% |
| !!! | TTTTTAACTTTTTTGTACTG+TGG | + | chr4_4:63982407-63982426 | Msa0694650:intron | 20.0% |
| !!! | TAATTTTACAGTATTATTGC+CGG | + | chr4_4:63982573-63982592 | Msa0694650:intron | 20.0% |
| !! | AATGGTTCAACTTAATTTAT+TGG | + | chr4_4:63982620-63982639 | Msa0694650:intron | 20.0% |
| !!! | TAACTAAGCAATTTTAACAT+TGG | - | chr4_4:63982759-63982778 | None:intergenic | 20.0% |
| !!! | TTTGATATTTCTATGCAATT+AGG | - | chr4_4:63982808-63982827 | None:intergenic | 20.0% |
| !! | GGTGTATTTAGAAAAATTTA+AGG | + | chr4_4:63984435-63984454 | Msa0694650:intron | 20.0% |
| !!! | ATATCTTATTTCTAAGAACT+TGG | - | chr4_4:63984534-63984553 | None:intergenic | 20.0% |
| !! | AATAAGAATTATGTTGTGAA+GGG | - | chr4_4:63984629-63984648 | None:intergenic | 20.0% |
| !! | AAATAAGAATTATGTTGTGA+AGG | - | chr4_4:63984630-63984649 | None:intergenic | 20.0% |
| !! | AAACTAAAATCTAGATAAGT+TGG | + | chr4_4:63984686-63984705 | Msa0694650:intron | 20.0% |
| !! | GTCAAATTTAAATGTTCAAT+TGG | + | chr4_4:63985627-63985646 | Msa0694650:intron | 20.0% |
| ! | TATGAATTATGGAGATAACT+AGG | - | chr4_4:63977751-63977770 | None:intergenic | 25.0% |
| ! | GTATTAGGGTTTATGAATTA+TGG | - | chr4_4:63977762-63977781 | None:intergenic | 25.0% |
| !!! | TTCTGTATTAGTTTTTTCAC+CGG | - | chr4_4:63977901-63977920 | None:intergenic | 25.0% |
| ! | GTGAAAAAACTAATACAGAA+TGG | + | chr4_4:63977901-63977920 | Msa0694650:exon | 25.0% |
| !!! | ATTTTAATCATCAGGTGAAA+AGG | - | chr4_4:63978049-63978068 | None:intergenic | 25.0% |
| ! | ATAACCTTATCATTGAAAAC+AGG | - | chr4_4:63978210-63978229 | None:intergenic | 25.0% |
| ! | AATTAACCAAACAAAGTTGA+AGG | - | chr4_4:63978289-63978308 | None:intergenic | 25.0% |
| !! | TTTTATATGCATGTATAAGC+TGG | + | chr4_4:63978605-63978624 | Msa0694650:intron | 25.0% |
| ! | TTTATATGCATGTATAAGCT+GGG | + | chr4_4:63978606-63978625 | Msa0694650:intron | 25.0% |
| ! | AAAACTTCCAAAAGTAACAA+AGG | - | chr4_4:63978659-63978678 | None:intergenic | 25.0% |
| !! | CTTGAATAATTGTAACTTGT+TGG | + | chr4_4:63978971-63978990 | Msa0694650:intron | 25.0% |
| !!! | CATTTTTTCATCCATTAATG+TGG | - | chr4_4:63979192-63979211 | None:intergenic | 25.0% |
| ! | AATGGATGAAAAAATGCTTA+CGG | + | chr4_4:63979196-63979215 | Msa0694650:intron | 25.0% |
| !!! | TATATTTTTACAGGATGCAT+CGG | + | chr4_4:63979255-63979274 | Msa0694650:intron | 25.0% |
| ! | ACACAATCGATATATATCAA+TGG | - | chr4_4:63979375-63979394 | None:intergenic | 25.0% |
| !!! | AATCAGTTTTTTTCATCTGT+AGG | - | chr4_4:63979476-63979495 | None:intergenic | 25.0% |
| ! | TTTCAAGAGTAAGCATATAT+TGG | + | chr4_4:63979494-63979513 | Msa0694650:intron | 25.0% |
| ! | CAAGATATTAAGGACATAAA+TGG | + | chr4_4:63979706-63979725 | Msa0694650:intron | 25.0% |
| !!! | CTAATCATTTTTTCGGTTTT+GGG | - | chr4_4:63979745-63979764 | None:intergenic | 25.0% |
| !!! | TCTAATCATTTTTTCGGTTT+TGG | - | chr4_4:63979746-63979765 | None:intergenic | 25.0% |
| !!! | CTTTTTCAATCAATTTTGGT+AGG | - | chr4_4:63979774-63979793 | None:intergenic | 25.0% |
| ! | ACAAAAAAAATCATGCTGAA+TGG | - | chr4_4:63980033-63980052 | None:intergenic | 25.0% |
| !!! | CATGATTTTTTTTGTTTTGC+TGG | + | chr4_4:63980038-63980057 | Msa0694650:intron | 25.0% |
| ! | CAATTCAGCATAGAAAAATA+TGG | - | chr4_4:63980340-63980359 | None:intergenic | 25.0% |
| !!! | AATTAACCCATTTTTAAGCA+AGG | + | chr4_4:63980506-63980525 | Msa0694650:CDS | 25.0% |
| ! | GAAAAACCTTGCTTAAAAAT+GGG | - | chr4_4:63980515-63980534 | None:intergenic | 25.0% |
| ! | AGAAAAACCTTGCTTAAAAA+TGG | - | chr4_4:63980516-63980535 | None:intergenic | 25.0% |
| ! | CATTAAACTTCAATTACTGT+AGG | - | chr4_4:63980648-63980667 | None:intergenic | 25.0% |
| !! | CGTGGTTTTCATAATATTTT+TGG | - | chr4_4:63980684-63980703 | None:intergenic | 25.0% |
| ! | AAGAGAAAACTATTGTCTAT+AGG | - | chr4_4:63981060-63981079 | None:intergenic | 25.0% |
| ! | CTTATTTATGTTGTTCTACT+TGG | + | chr4_4:63981163-63981182 | Msa0694650:intron | 25.0% |
| ! | ATTTATTTCATCTCTTGTGA+AGG | + | chr4_4:63981218-63981237 | Msa0694650:intron | 25.0% |
| !!! | CAAAGCAATTTGTTAGAATT+CGG | - | chr4_4:63981546-63981565 | None:intergenic | 25.0% |
| ! | TTGTTCTGTAATACATTGTT+TGG | + | chr4_4:63981563-63981582 | Msa0694650:intron | 25.0% |
| ! | TACTAAATGTTGTCAAACAA+TGG | + | chr4_4:63981586-63981605 | Msa0694650:intron | 25.0% |
| ! | AAATGAAATCACTGTAAATC+GGG | - | chr4_4:63982044-63982063 | None:intergenic | 25.0% |
| ! | GAAATGAAATCACTGTAAAT+CGG | - | chr4_4:63982045-63982064 | None:intergenic | 25.0% |
| !!! | TTTCTTCATGTTCAAGTTTT+TGG | + | chr4_4:63982061-63982080 | Msa0694650:intron | 25.0% |
| !! | TGATGATAACGATATTAAAC+TGG | - | chr4_4:63982167-63982186 | None:intergenic | 25.0% |
| ! | CCAAAGATATTCAAATAAGA+TGG | - | chr4_4:63982438-63982457 | None:intergenic | 25.0% |
| !! | CCATCTTATTTGAATATCTT+TGG | + | chr4_4:63982435-63982454 | Msa0694650:intron | 25.0% |
| !! | ATCTTTGGTTTCTTGTATTA+TGG | + | chr4_4:63982450-63982469 | Msa0694650:intron | 25.0% |
| !!! | TCCATTTTATTTGAAGTCTT+CGG | + | chr4_4:63982477-63982496 | Msa0694650:intron | 25.0% |
| !! | CCATTGATTATTGTAAATAC+AGG | - | chr4_4:63982605-63982624 | None:intergenic | 25.0% |
| ! | CCTGTATTTACAATAATCAA+TGG | + | chr4_4:63982602-63982621 | Msa0694650:intron | 25.0% |
| ! | TGCATAAAAATTAACTGTTG+AGG | - | chr4_4:63983137-63983156 | None:intergenic | 25.0% |
| ! | GAAAAAATCAGATTCCTTAA+AGG | + | chr4_4:63983186-63983205 | Msa0694650:CDS | 25.0% |
| !! | TTGTTTCAATTTTTCCTCAA+GGG | - | chr4_4:63983393-63983412 | None:intergenic | 25.0% |
| !! | TTTGTTTCAATTTTTCCTCA+AGG | - | chr4_4:63983394-63983413 | None:intergenic | 25.0% |
| ! | TGAGGAAAAATTGAAACAAA+AGG | + | chr4_4:63983394-63983413 | Msa0694650:CDS | 25.0% |
| ! | GAGGAAAAATTGAAACAAAA+GGG | + | chr4_4:63983395-63983414 | Msa0694650:CDS | 25.0% |
| ! | TTCAGATTAGCATTAACAAA+CGG | - | chr4_4:63983646-63983665 | None:intergenic | 25.0% |
| !! | ACTCATTGAGATTTTATTGA+TGG | + | chr4_4:63983678-63983697 | Msa0694650:intron | 25.0% |
| !! | TTTTTGAACTCGAGATTAAA+AGG | - | chr4_4:63983771-63983790 | None:intergenic | 25.0% |
| !! | TAGAGTTGTCTTTTATATTG+AGG | - | chr4_4:63983923-63983942 | None:intergenic | 25.0% |
| ! | AAAAAATGTCTGACCAAAAT+TGG | - | chr4_4:63983956-63983975 | None:intergenic | 25.0% |
| ! | CACATATATACATCCAATAT+GGG | + | chr4_4:63984151-63984170 | Msa0694650:intron | 25.0% |
| ! | ACACCATTATAACTACAATT+TGG | + | chr4_4:63984579-63984598 | Msa0694650:intron | 25.0% |
| ! | CAACCAAATTGTAGTTATAA+TGG | - | chr4_4:63984585-63984604 | None:intergenic | 25.0% |
| ! | AGAAGCGAATTATCTTAAAA+TGG | + | chr4_4:63984732-63984751 | Msa0694650:intron | 25.0% |
| ! | CAAATTTGTAAGTGTTAACT+TGG | + | chr4_4:63985482-63985501 | Msa0694650:intron | 25.0% |
| ! | AACATCTTTGGCATATTAAA+TGG | + | chr4_4:63985938-63985957 | Msa0694650:three_prime_UTR | 25.0% |
| CTTCAGTGGAAAAGTTATAA+CGG | - | chr4_4:63977994-63978013 | None:intergenic | 30.0% | |
| ! | AATGCCTGTTTTCAATGATA+AGG | + | chr4_4:63978203-63978222 | Msa0694650:CDS | 30.0% |
| !! | GTTTGGTTTGTTTAGTAATG+AGG | + | chr4_4:63978724-63978743 | Msa0694650:intron | 30.0% |
| ! | AAATATTTGAAGTCGTTGCA+TGG | + | chr4_4:63978753-63978772 | Msa0694650:CDS | 30.0% |
| GGTATTAAGAAAACTATCGT+TGG | + | chr4_4:63978816-63978835 | Msa0694650:CDS | 30.0% | |
| ! | TGCTGATAATCGTAATTTTG+AGG | + | chr4_4:63978857-63978876 | Msa0694650:CDS | 30.0% |
| !!! | ATAATCGTAATTTTGAGGTG+AGG | + | chr4_4:63978862-63978881 | Msa0694650:intron | 30.0% |
| GAAAGCAAAACAATATACAG+AGG | + | chr4_4:63979065-63979084 | Msa0694650:CDS | 30.0% | |
| ATGGATGAAAAAATGCTTAC+GGG | + | chr4_4:63979197-63979216 | Msa0694650:intron | 30.0% | |
| TAATGTAACTTTCAATGTCG+AGG | + | chr4_4:63979279-63979298 | Msa0694650:CDS | 30.0% | |
| AATCGATATATATCAATGGC+AGG | - | chr4_4:63979371-63979390 | None:intergenic | 30.0% | |
| ! | TTATCTGGTTTAGTAGCAAA+GGG | - | chr4_4:63979417-63979436 | None:intergenic | 30.0% |
| ! | ATTATCTGGTTTAGTAGCAA+AGG | - | chr4_4:63979418-63979437 | None:intergenic | 30.0% |
| ATTCACAGCTATGAATGAAA+TGG | - | chr4_4:63979451-63979470 | None:intergenic | 30.0% | |
| ! | ATTACAAAACTGATTAGCCA+AGG | + | chr4_4:63979614-63979633 | Msa0694650:intron | 30.0% |
| ! | TTACAAAACTGATTAGCCAA+GGG | + | chr4_4:63979615-63979634 | Msa0694650:intron | 30.0% |
| TATGTTTCTCTATTCACCAA+TGG | - | chr4_4:63979668-63979687 | None:intergenic | 30.0% | |
| TTGTCCTACTTTAGATGAAA+AGG | + | chr4_4:63979815-63979834 | Msa0694650:intron | 30.0% | |
| TCATTGTTTACCCTCAAATT+GGG | - | chr4_4:63979841-63979860 | None:intergenic | 30.0% | |
| TTCATTGTTTACCCTCAAAT+TGG | - | chr4_4:63979842-63979861 | None:intergenic | 30.0% | |
| TGAGGGTAAACAATGAAATA+AGG | + | chr4_4:63979845-63979864 | Msa0694650:intron | 30.0% | |
| GAGGGTAAACAATGAAATAA+GGG | + | chr4_4:63979846-63979865 | Msa0694650:intron | 30.0% | |
| ACTAATTATCCTCAAAGCAA+TGG | - | chr4_4:63979964-63979983 | None:intergenic | 30.0% | |
| ! | AATATGGGTTGAAAAGAAGA+GGG | - | chr4_4:63980324-63980343 | None:intergenic | 30.0% |
| ! | AAATATGGGTTGAAAAGAAG+AGG | - | chr4_4:63980325-63980344 | None:intergenic | 30.0% |
| ACAACCAATCAACTAATTCT+GGG | - | chr4_4:63980449-63980468 | None:intergenic | 30.0% | |
| GAACTACTCATGGAAAAAAT+GGG | - | chr4_4:63980567-63980586 | None:intergenic | 30.0% | |
| ! | GACTGATTCTAATATTCTAG+AGG | - | chr4_4:63980782-63980801 | None:intergenic | 30.0% |
| CATCAAAAATATATCTAGCG+AGG | + | chr4_4:63980820-63980839 | Msa0694650:intron | 30.0% | |
| AAAGAGACGCAAAAAATGAA+AGG | - | chr4_4:63980875-63980894 | None:intergenic | 30.0% | |
| TTTGCGTCTCTTTAAACTTT+AGG | + | chr4_4:63980882-63980901 | Msa0694650:intron | 30.0% | |
| TAACACTATAATTCCTCACA+GGG | - | chr4_4:63980946-63980965 | None:intergenic | 30.0% | |
| ATAACACTATAATTCCTCAC+AGG | - | chr4_4:63980947-63980966 | None:intergenic | 30.0% | |
| ACAGATACACTTAAAAACAG+TGG | - | chr4_4:63980980-63980999 | None:intergenic | 30.0% | |
| ATCTCTTGTGAAGGTTAAAA+AGG | + | chr4_4:63981227-63981246 | Msa0694650:intron | 30.0% | |
| TCTCTTGTGAAGGTTAAAAA+GGG | + | chr4_4:63981228-63981247 | Msa0694650:intron | 30.0% | |
| TAAAAAGGGGGAAATAGTTA+TGG | + | chr4_4:63981242-63981261 | Msa0694650:CDS | 30.0% | |
| TTAATTCCTTGATCTCTTCA+AGG | - | chr4_4:63981392-63981411 | None:intergenic | 30.0% | |
| GATCAAGGAATTAATGAATC+AGG | + | chr4_4:63981398-63981417 | Msa0694650:CDS | 30.0% | |
| ! | TGAACATTGCTGTTAAATAG+CGG | + | chr4_4:63981498-63981517 | Msa0694650:intron | 30.0% |
| ! | AATATTTTCTAACAGTGACC+AGG | - | chr4_4:63981704-63981723 | None:intergenic | 30.0% |
| ACATATTAAGAAACTATGGG+AGG | + | chr4_4:63981728-63981747 | Msa0694650:intron | 30.0% | |
| GATGAATGACTTGATGTAAT+GGG | - | chr4_4:63981837-63981856 | None:intergenic | 30.0% | |
| ACACTGTCAAAAAATGTAGA+CGG | - | chr4_4:63981911-63981930 | None:intergenic | 30.0% | |
| AATGAAATCACTGTAAATCG+GGG | - | chr4_4:63982043-63982062 | None:intergenic | 30.0% | |
| !!! | TTTTTGGTTGCTTTTCTTTC+TGG | + | chr4_4:63982077-63982096 | Msa0694650:intron | 30.0% |
| ACACAATCCAATATAAGCAT+AGG | - | chr4_4:63982651-63982670 | None:intergenic | 30.0% | |
| ! | TATCAAATCTGAGATGTACT+CGG | + | chr4_4:63982821-63982840 | Msa0694650:intron | 30.0% |
| TTCGTTTATAGCGATAGAAT+CGG | - | chr4_4:63983001-63983020 | None:intergenic | 30.0% | |
| AAATCAGATTCCTTAAAGGA+TGG | + | chr4_4:63983190-63983209 | Msa0694650:CDS | 30.0% | |
| !!! | TTTTTTTGCACCATCCTTTA+AGG | - | chr4_4:63983203-63983222 | None:intergenic | 30.0% |
| TTAAAGGATGGTGCAAAAAA+AGG | + | chr4_4:63983202-63983221 | Msa0694650:CDS | 30.0% | |
| AGGAAGAAAAGTAAAAGATC+AGG | + | chr4_4:63983222-63983241 | Msa0694650:CDS | 30.0% | |
| !! | TTTTGAGAATTACTAGGCTT+TGG | - | chr4_4:63983440-63983459 | None:intergenic | 30.0% |
| TGTAAGTATCTTACAAATGC+AGG | - | chr4_4:63983740-63983759 | None:intergenic | 30.0% | |
| TCGAGTTCAAAAAATGTCAT+TGG | + | chr4_4:63983778-63983797 | Msa0694650:intron | 30.0% | |
| CGAGTTCAAAAAATGTCATT+GGG | + | chr4_4:63983779-63983798 | Msa0694650:intron | 30.0% | |
| TTCAAAAAATGTCATTGGGA+CGG | + | chr4_4:63983783-63983802 | Msa0694650:intron | 30.0% | |
| ! | CTAGAAGTAACTACCAATTT+TGG | + | chr4_4:63983940-63983959 | Msa0694650:intron | 30.0% |
| ACAACACTGTTAAATGAGTT+TGG | + | chr4_4:63983996-63984015 | Msa0694650:intron | 30.0% | |
| AAAAGATAGTTCATGAGTTG+AGG | + | chr4_4:63984030-63984049 | Msa0694650:intron | 30.0% | |
| ! | AAAGATAGTTCATGAGTTGA+GGG | + | chr4_4:63984031-63984050 | Msa0694650:intron | 30.0% |
| !! | TATGGGTATTGAAGTTGTAT+TGG | - | chr4_4:63984117-63984136 | None:intergenic | 30.0% |
| ATTGGATGTATATATGTGGT+TGG | - | chr4_4:63984149-63984168 | None:intergenic | 30.0% | |
| CCATATTGGATGTATATATG+TGG | - | chr4_4:63984153-63984172 | None:intergenic | 30.0% | |
| CCACATATATACATCCAATA+TGG | + | chr4_4:63984150-63984169 | Msa0694650:intron | 30.0% | |
| ACTCTTCATAAACTCATTTC+AGG | - | chr4_4:63984461-63984480 | None:intergenic | 30.0% | |
| TGAAATGAGTTTATGAAGAG+TGG | + | chr4_4:63984460-63984479 | Msa0694650:intron | 30.0% | |
| GGGCAAATTTATACAGAAAA+AGG | - | chr4_4:63984609-63984628 | None:intergenic | 30.0% | |
| TATGGATAATAGCGAAAAGA+AGG | - | chr4_4:63984825-63984844 | None:intergenic | 30.0% | |
| ACTAAAGTTAGCAATAGTCA+GGG | - | chr4_4:63984886-63984905 | None:intergenic | 30.0% | |
| AACTAAAGTTAGCAATAGTC+AGG | - | chr4_4:63984887-63984906 | None:intergenic | 30.0% | |
| ! | ATTGAGGATGATAATGATGA+TGG | + | chr4_4:63985121-63985140 | Msa0694650:CDS | 30.0% |
| TAGTTTCATGTTGAAGAAGA+TGG | - | chr4_4:63985328-63985347 | None:intergenic | 30.0% | |
| !!! | AAAGTTTGTTTTGCTTTTGC+AGG | + | chr4_4:63985347-63985366 | Msa0694650:intron | 30.0% |
| TGACAAACAGTAAACAAGAA+AGG | - | chr4_4:63985655-63985674 | None:intergenic | 30.0% | |
| ! | TTTACTGTTTGTCATGCTTT+TGG | + | chr4_4:63985661-63985680 | Msa0694650:intron | 30.0% |
| TAGAACGATATTGTAACGTA+AGG | - | chr4_4:63985844-63985863 | None:intergenic | 30.0% | |
| GATTGGAAACTTAACATCTT+TGG | + | chr4_4:63985926-63985945 | Msa0694650:three_prime_UTR | 30.0% | |
| TCAGAATAGAGAGCAAATAC+CGG | - | chr4_4:63977856-63977875 | None:intergenic | 35.0% | |
| AGTACTATTCAAGATTTCGC+CGG | + | chr4_4:63977879-63977898 | Msa0694650:five_prime_UTR | 35.0% | |
| TAATACAGAATGGCGAAGAA+AGG | + | chr4_4:63977911-63977930 | Msa0694650:exon | 35.0% | |
| ! | TAACTTTTCCACTGAAGACA+TGG | + | chr4_4:63977997-63978016 | Msa0694650:CDS | 35.0% |
| GAATCAGCATTAATGTCAAG+TGG | - | chr4_4:63978159-63978178 | None:intergenic | 35.0% | |
| ! | GCTTTTCCTTCAACTTTGTT+TGG | + | chr4_4:63978280-63978299 | Msa0694650:intron | 35.0% |
| ! | TGATAATGATGACACTGATG+AGG | + | chr4_4:63978339-63978358 | Msa0694650:CDS | 35.0% |
| ATACAAAAAGACCCAAGCAT+TGG | + | chr4_4:63978539-63978558 | Msa0694650:intron | 35.0% | |
| TACGATTATCAGCACCATAT+CGG | - | chr4_4:63978851-63978870 | None:intergenic | 35.0% | |
| AATTTCTTCCTCTTCCTTTG+GGG | - | chr4_4:63979025-63979044 | None:intergenic | 35.0% | |
| CAATTTCTTCCTCTTCCTTT+GGG | - | chr4_4:63979026-63979045 | None:intergenic | 35.0% | |
| AATGTTATGTTGCCTAAGCA+TGG | + | chr4_4:63979159-63979178 | Msa0694650:intron | 35.0% | |
| TGGATGAAAAAATGCTTACG+GGG | + | chr4_4:63979198-63979217 | Msa0694650:intron | 35.0% | |
| AGCAAATGAACGTTCTGTAT+AGG | + | chr4_4:63979326-63979345 | Msa0694650:CDS | 35.0% | |
| TATATATCAATGGCAGGATG+AGG | - | chr4_4:63979365-63979384 | None:intergenic | 35.0% | |
| ATGGATGCAATGTCATTATC+TGG | - | chr4_4:63979432-63979451 | None:intergenic | 35.0% | |
| !! | TTGAATTTTAGAGGAGCGAA+TGG | + | chr4_4:63979565-63979584 | Msa0694650:intron | 35.0% |
| !! | AGATTACCTTCTGAAACCAT+TGG | + | chr4_4:63979649-63979668 | Msa0694650:intron | 35.0% |
| TATTCACCAATGGTTTCAGA+AGG | - | chr4_4:63979658-63979677 | None:intergenic | 35.0% | |
| CAATAGCTGAGATTTCTACT+GGG | - | chr4_4:63979884-63979903 | None:intergenic | 35.0% | |
| CTGCACATGTAAAATCATCA+AGG | - | chr4_4:63979907-63979926 | None:intergenic | 35.0% | |
| TGGCATATCAGACATCTAAA+AGG | - | chr4_4:63980072-63980091 | None:intergenic | 35.0% | |
| GTGTTGAATCCTGACAAAAT+TGG | + | chr4_4:63980258-63980277 | Msa0694650:intron | 35.0% | |
| AATCCTGACAAAATTGGATC+AGG | + | chr4_4:63980264-63980283 | Msa0694650:intron | 35.0% | |
| AAGGCCATAACAGCAATAAA+GGG | - | chr4_4:63980292-63980311 | None:intergenic | 35.0% | |
| TAAGGCCATAACAGCAATAA+AGG | - | chr4_4:63980293-63980312 | None:intergenic | 35.0% | |
| ! | AAGAAGAGGGTGTATATGTA+AGG | - | chr4_4:63980311-63980330 | None:intergenic | 35.0% |
| CAACCAATCAACTAATTCTG+GGG | - | chr4_4:63980448-63980467 | None:intergenic | 35.0% | |
| GACAACCAATCAACTAATTC+TGG | - | chr4_4:63980450-63980469 | None:intergenic | 35.0% | |
| TTGGTTGTCAGAATTAAACG+AGG | + | chr4_4:63980461-63980480 | Msa0694650:CDS | 35.0% | |
| GGAACTACTCATGGAAAAAA+TGG | - | chr4_4:63980568-63980587 | None:intergenic | 35.0% | |
| !!! | CATAGTTTTGGAACTACTCA+TGG | - | chr4_4:63980577-63980596 | None:intergenic | 35.0% |
| AGTTCCAAAACTATGTGAAG+AGG | + | chr4_4:63980582-63980601 | Msa0694650:intron | 35.0% | |
| ! | TCAACCTCTTCACATAGTTT+TGG | - | chr4_4:63980589-63980608 | None:intergenic | 35.0% |
| ACAATGAGCATGCTTTCATT+AGG | - | chr4_4:63980710-63980729 | None:intergenic | 35.0% | |
| ! | TCATTGTGAATGACTTGGAA+TGG | + | chr4_4:63980723-63980742 | Msa0694650:intron | 35.0% |
| TATTCTGTTTACCGAGACAT+TGG | + | chr4_4:63980917-63980936 | Msa0694650:intron | 35.0% | |
| ATTCTGTTTACCGAGACATT+GGG | + | chr4_4:63980918-63980937 | Msa0694650:intron | 35.0% | |
| CTCTTGTGAAGGTTAAAAAG+GGG | + | chr4_4:63981229-63981248 | Msa0694650:intron | 35.0% | |
| TCTTGTGAAGGTTAAAAAGG+GGG | + | chr4_4:63981230-63981249 | Msa0694650:intron | 35.0% | |
| AAAGGTTATAGCTTGGCAAT+AGG | - | chr4_4:63981313-63981332 | None:intergenic | 35.0% | |
| GAAGGTAAAAGGTTATAGCT+TGG | - | chr4_4:63981320-63981339 | None:intergenic | 35.0% | |
| AGAATTCGGCTAAGATATTG+CGG | - | chr4_4:63981532-63981551 | None:intergenic | 35.0% | |
| TTGTCAAACAATGGCTATAG+TGG | + | chr4_4:63981595-63981614 | Msa0694650:intron | 35.0% | |
| CATTGTGTTAAAAACCAGAC+CGG | + | chr4_4:63981627-63981646 | Msa0694650:intron | 35.0% | |
| ! | TGACTTGATGTAATGGGATT+GGG | - | chr4_4:63981831-63981850 | None:intergenic | 35.0% |
| ! | ATGACTTGATGTAATGGGAT+TGG | - | chr4_4:63981832-63981851 | None:intergenic | 35.0% |
| GGATGAATGACTTGATGTAA+TGG | - | chr4_4:63981838-63981857 | None:intergenic | 35.0% | |
| GGTCAAGGCATATAAAATCT+GGG | - | chr4_4:63981859-63981878 | None:intergenic | 35.0% | |
| TGGTCAAGGCATATAAAATC+TGG | - | chr4_4:63981860-63981879 | None:intergenic | 35.0% | |
| AAAAATGTAGACGGTCATCA+GGG | - | chr4_4:63981902-63981921 | None:intergenic | 35.0% | |
| AAAAAATGTAGACGGTCATC+AGG | - | chr4_4:63981903-63981922 | None:intergenic | 35.0% | |
| GAGAGAAGCAATAAAGGTTT+GGG | - | chr4_4:63981992-63982011 | None:intergenic | 35.0% | |
| AGAGAGAAGCAATAAAGGTT+TGG | - | chr4_4:63981993-63982012 | None:intergenic | 35.0% | |
| AAGCAAGAGAGAAGCAATAA+AGG | - | chr4_4:63981998-63982017 | None:intergenic | 35.0% | |
| ATGAAATCACTGTAAATCGG+GGG | - | chr4_4:63982042-63982061 | None:intergenic | 35.0% | |
| GTTGACGGTTATACTTCAAT+CGG | + | chr4_4:63982134-63982153 | Msa0694650:intron | 35.0% | |
| TATCGTTATCATCACCAGTT+TGG | + | chr4_4:63982173-63982192 | Msa0694650:intron | 35.0% | |
| !!! | AGGTCCTGGTTTTAAAACAA+GGG | + | chr4_4:63982240-63982259 | Msa0694650:intron | 35.0% |
| !!! | ATAGCCCTTGTTTTAAAACC+AGG | - | chr4_4:63982247-63982266 | None:intergenic | 35.0% |
| ! | TATGTTTAGCTTCTGCTAGA+TGG | + | chr4_4:63982361-63982380 | Msa0694650:intron | 35.0% |
| GCCGAAGACTTCAAATAAAA+TGG | - | chr4_4:63982481-63982500 | None:intergenic | 35.0% | |
| TCTTCGGCTTTCTTGTATTA+TGG | + | chr4_4:63982493-63982512 | Msa0694650:intron | 35.0% | |
| ! | TTACAGTATTATTGCCGGTT+TGG | + | chr4_4:63982578-63982597 | Msa0694650:intron | 35.0% |
| TTGTAAATACAGGACCAAAC+CGG | - | chr4_4:63982595-63982614 | None:intergenic | 35.0% | |
| GGAAATGCCTATGCTTATAT+TGG | + | chr4_4:63982641-63982660 | Msa0694650:intron | 35.0% | |
| TCTATGCAATTAGGCACAAA+TGG | - | chr4_4:63982799-63982818 | None:intergenic | 35.0% | |
| AATTAACTGTTGAGGACTTG+TGG | - | chr4_4:63983129-63983148 | None:intergenic | 35.0% | |
| TTCATCTCAACTACATTGCT+AGG | - | chr4_4:63983169-63983188 | None:intergenic | 35.0% | |
| TTAACTGTTGCACCTTAACA+TGG | + | chr4_4:63983315-63983334 | Msa0694650:intron | 35.0% | |
| !! | GAACGCTTTTGAGAATTACT+AGG | - | chr4_4:63983446-63983465 | None:intergenic | 35.0% |
| AATCATCATATGTTGCAAGC+TGG | - | chr4_4:63983567-63983586 | None:intergenic | 35.0% | |
| !!! | TGATGATTTTGATGATGCTG+TGG | + | chr4_4:63983579-63983598 | Msa0694650:CDS | 35.0% |
| ATGATGCTGTGGTTGTTAAT+GGG | + | chr4_4:63983590-63983609 | Msa0694650:CDS | 35.0% | |
| TGCTAATCTGAAGAAACTCA+AGG | + | chr4_4:63983654-63983673 | Msa0694650:CDS | 35.0% | |
| TCAAAAAATGTCATTGGGAC+GGG | + | chr4_4:63983784-63983803 | Msa0694650:intron | 35.0% | |
| GACAAGAGACTAATATCCTA+GGG | - | chr4_4:63983836-63983855 | None:intergenic | 35.0% | |
| AGACAAGAGACTAATATCCT+AGG | - | chr4_4:63983837-63983856 | None:intergenic | 35.0% | |
| AGTCTCTTGTCTATTGAAAG+AGG | + | chr4_4:63983845-63983864 | Msa0694650:intron | 35.0% | |
| GTCTCTTGTCTATTGAAAGA+GGG | + | chr4_4:63983846-63983865 | Msa0694650:intron | 35.0% | |
| AGATAACATGCAGTAAAAGC+AGG | - | chr4_4:63983897-63983916 | None:intergenic | 35.0% | |
| CATTGTTAAGGTTCCCATAT+TGG | - | chr4_4:63984167-63984186 | None:intergenic | 35.0% | |
| ATATGGGAACCTTAACAATG+TGG | + | chr4_4:63984167-63984186 | Msa0694650:intron | 35.0% | |
| TATGGGAACCTTAACAATGT+GGG | + | chr4_4:63984168-63984187 | Msa0694650:intron | 35.0% | |
| TGGTATCAGAGTCAGATTAA+GGG | - | chr4_4:63984262-63984281 | None:intergenic | 35.0% | |
| AACAACCACACAAGTGTTTA+AGG | - | chr4_4:63984306-63984325 | None:intergenic | 35.0% | |
| GAGGGAGGATATAAATTACA+CGG | + | chr4_4:63984391-63984410 | Msa0694650:intron | 35.0% | |
| !! | TCAGTTTCTAGGAAGCATTA+TGG | - | chr4_4:63984843-63984862 | None:intergenic | 35.0% |
| !! | TGATGATGGTGATGATCAAA+TGG | + | chr4_4:63985135-63985154 | Msa0694650:CDS | 35.0% |
| ! | ACCTCTTCAAGGTGAAATTT+TGG | + | chr4_4:63985280-63985299 | Msa0694650:intron | 35.0% |
| TCCAAAATTTCACCTTGAAG+AGG | - | chr4_4:63985284-63985303 | None:intergenic | 35.0% | |
| ! | TCTTCAAGGTGAAATTTTGG+AGG | + | chr4_4:63985283-63985302 | Msa0694650:intron | 35.0% |
| GAATCCTAGAAAGAACTACA+AGG | + | chr4_4:63985569-63985588 | Msa0694650:CDS | 35.0% | |
| GCTTTCACTTACTCTTAGAA+TGG | + | chr4_4:63985593-63985612 | Msa0694650:intron | 35.0% | |
| GATAGTTGCATTAATTCCAG+TGG | - | chr4_4:63985781-63985800 | None:intergenic | 35.0% | |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr4_4:63986024-63986043 | None:intergenic | 35.0% |
| AAAAGTTATAACGGTCGCGT+CGG | - | chr4_4:63977985-63978004 | None:intergenic | 40.0% | |
| ATTCGCAGTTCATAAGCAGA+GGG | + | chr4_4:63978125-63978144 | Msa0694650:intron | 40.0% | |
| AATGATGACACTGATGAGGA+CGG | + | chr4_4:63978343-63978362 | Msa0694650:CDS | 40.0% | |
| GACGAGGATGATGAATATGA+TGG | + | chr4_4:63978388-63978407 | Msa0694650:CDS | 40.0% | |
| GGATGATGAATATGATGGCA+AGG | + | chr4_4:63978393-63978412 | Msa0694650:CDS | 40.0% | |
| TGAATATGATGGCAAGGAGA+AGG | + | chr4_4:63978399-63978418 | Msa0694650:CDS | 40.0% | |
| GAATATGATGGCAAGGAGAA+GGG | + | chr4_4:63978400-63978419 | Msa0694650:CDS | 40.0% | |
| ! | GCTTGGGTCTTTTTGTATCT+CGG | - | chr4_4:63978537-63978556 | None:intergenic | 40.0% |
| TGCATGTATAAGCTGGGTTT+AGG | + | chr4_4:63978612-63978631 | Msa0694650:intron | 40.0% | |
| GCATGTATAAGCTGGGTTTA+GGG | + | chr4_4:63978613-63978632 | Msa0694650:intron | 40.0% | |
| ! | TATTTGAAGTCGTTGCATGG+TGG | + | chr4_4:63978756-63978775 | Msa0694650:CDS | 40.0% |
| CAAGATGAAGAAGACGATGA+AGG | + | chr4_4:63978795-63978814 | Msa0694650:CDS | 40.0% | |
| GCAATTTCTTCCTCTTCCTT+TGG | - | chr4_4:63979027-63979046 | None:intergenic | 40.0% | |
| !! | AGAGGAAGATTTTGACCTTG+TGG | + | chr4_4:63979083-63979102 | Msa0694650:CDS | 40.0% |
| CATTATCTTCGTCTTCCACA+AGG | - | chr4_4:63979101-63979120 | None:intergenic | 40.0% | |
| TTATGTTGCCTAAGCATGGT+CGG | + | chr4_4:63979163-63979182 | Msa0694650:intron | 40.0% | |
| ! | ATGGTCGGTTTCCACATTAA+TGG | + | chr4_4:63979178-63979197 | Msa0694650:intron | 40.0% |
| !! | AATTTTAGAGGAGCGAATGG+AGG | + | chr4_4:63979568-63979587 | Msa0694650:intron | 40.0% |
| !! | TGGAGGAAATTTGGTGTTCA+CGG | + | chr4_4:63979585-63979604 | Msa0694650:intron | 40.0% |
| !! | AATCTTGACTAGTCTTCCCT+TGG | - | chr4_4:63979634-63979653 | None:intergenic | 40.0% |
| !! | TGGGCCTTTTCATCTAAAGT+AGG | - | chr4_4:63979822-63979841 | None:intergenic | 40.0% |
| AGATGAAAAGGCCCAATTTG+AGG | + | chr4_4:63979827-63979846 | Msa0694650:intron | 40.0% | |
| GATGAAAAGGCCCAATTTGA+GGG | + | chr4_4:63979828-63979847 | Msa0694650:intron | 40.0% | |
| GCAATAGCTGAGATTTCTAC+TGG | - | chr4_4:63979885-63979904 | None:intergenic | 40.0% | |
| AGCAATATTCAGCAGAGATG+TGG | + | chr4_4:63980212-63980231 | Msa0694650:intron | 40.0% | |
| AGTGACTATCTTCTCTTTGC+AGG | + | chr4_4:63980418-63980437 | Msa0694650:intron | 40.0% | |
| TACTCATGGAAAAAATGGGC+AGG | - | chr4_4:63980563-63980582 | None:intergenic | 40.0% | |
| CATGCTTTCATTAGGTTACG+TGG | - | chr4_4:63980702-63980721 | None:intergenic | 40.0% | |
| CATGCTCATTGTGAATGACT+TGG | + | chr4_4:63980718-63980737 | Msa0694650:intron | 40.0% | |
| AATGGCATATTGCCGGAAAA+TGG | + | chr4_4:63980741-63980760 | Msa0694650:intron | 40.0% | |
| ATATTGCCGGAAAATGGTTC+CGG | + | chr4_4:63980747-63980766 | Msa0694650:intron | 40.0% | |
| GAGACGCAAAAAATGAAAGG+AGG | - | chr4_4:63980872-63980891 | None:intergenic | 40.0% | |
| TTCTGTTTACCGAGACATTG+GGG | + | chr4_4:63980919-63980938 | Msa0694650:intron | 40.0% | |
| AAGGGGGAAATAGTTATGGA+AGG | + | chr4_4:63981246-63981265 | Msa0694650:CDS | 40.0% | |
| GGACTTGAGTAGAAGGTAAA+AGG | - | chr4_4:63981331-63981350 | None:intergenic | 40.0% | |
| ! | TTCAACCCAATCAAAGCACT+GGG | + | chr4_4:63981652-63981671 | Msa0694650:intron | 40.0% |
| GAAGATGACAACACACTGTT+TGG | - | chr4_4:63981880-63981899 | None:intergenic | 40.0% | |
| !!! | TTTTAGCTTCAGTAGCAACC+TGG | + | chr4_4:63982111-63982130 | Msa0694650:intron | 40.0% |
| ! | TTTAGCTTCAGTAGCAACCT+GGG | + | chr4_4:63982112-63982131 | Msa0694650:intron | 40.0% |
| !!! | CAGGTCCTGGTTTTAAAACA+AGG | + | chr4_4:63982239-63982258 | Msa0694650:intron | 40.0% |
| !! | GTTGTTTTGTCTGTTGAGTG+AGG | - | chr4_4:63982879-63982898 | None:intergenic | 40.0% |
| TGAACTTCCAGTTGAACTTG+AGG | + | chr4_4:63982906-63982925 | Msa0694650:CDS | 40.0% | |
| AGAATGTCCTCAAGTTCAAC+TGG | - | chr4_4:63982916-63982935 | None:intergenic | 40.0% | |
| TTTATAGCGATAGAATCGGC+TGG | - | chr4_4:63982997-63983016 | None:intergenic | 40.0% | |
| TATAAACGAAGAACAGCCTC+TGG | + | chr4_4:63983011-63983030 | Msa0694650:CDS | 40.0% | |
| AAAAGTTAGAGCTTCCCTTG+AGG | + | chr4_4:63983376-63983395 | Msa0694650:CDS | 40.0% | |
| GCAGATGTTGGAAACAAGAA+AGG | - | chr4_4:63983512-63983531 | None:intergenic | 40.0% | |
| GTCAGTAAGTTTGCAGATGT+TGG | - | chr4_4:63983524-63983543 | None:intergenic | 40.0% | |
| GATGATGCTGTGGTTGTTAA+TGG | + | chr4_4:63983589-63983608 | Msa0694650:CDS | 40.0% | |
| GTAAAAGCAGGACTTCATGT+TGG | - | chr4_4:63983885-63983904 | None:intergenic | 40.0% | |
| GTGTTAAGTGTTTGTCTGGT+TGG | - | chr4_4:63984060-63984079 | None:intergenic | 40.0% | |
| !! | GGAAGTGTTAAGTGTTTGTC+TGG | - | chr4_4:63984064-63984083 | None:intergenic | 40.0% |
| TCCCACATTGATAAGGTTTC+CGG | - | chr4_4:63984092-63984111 | None:intergenic | 40.0% | |
| ATTGGAGTCCCACATTGATA+AGG | - | chr4_4:63984099-63984118 | None:intergenic | 40.0% | |
| ACAACTTCAATACCCATACG+AGG | + | chr4_4:63984119-63984138 | Msa0694650:intron | 40.0% | |
| CAACTTCAATACCCATACGA+GGG | + | chr4_4:63984120-63984139 | Msa0694650:intron | 40.0% | |
| AATGAGGTCCCACATTGTTA+AGG | - | chr4_4:63984179-63984198 | None:intergenic | 40.0% | |
| !! | CGGGTATTGAATTCGTAATG+AGG | - | chr4_4:63984195-63984214 | None:intergenic | 40.0% |
| AAAATCCACGCTAAGTGTGT+AGG | - | chr4_4:63984218-63984237 | None:intergenic | 40.0% | |
| AGATTAAGGGTAGCAATGTG+GGG | - | chr4_4:63984249-63984268 | None:intergenic | 40.0% | |
| CAGATTAAGGGTAGCAATGT+GGG | - | chr4_4:63984250-63984269 | None:intergenic | 40.0% | |
| TCAGATTAAGGGTAGCAATG+TGG | - | chr4_4:63984251-63984270 | None:intergenic | 40.0% | |
| GTGGTATCAGAGTCAGATTA+AGG | - | chr4_4:63984263-63984282 | None:intergenic | 40.0% | |
| TCTTTGTCCAATGTTACCGT+TGG | + | chr4_4:63984325-63984344 | Msa0694650:intron | 40.0% | |
| TGTTCTCATGTTGATGCCAA+CGG | - | chr4_4:63984344-63984363 | None:intergenic | 40.0% | |
| AATTACACGGTTGTTGAGCT+AGG | + | chr4_4:63984404-63984423 | Msa0694650:intron | 40.0% | |
| TAATTCAACCCTTACCACGT+CGG | - | chr4_4:63984504-63984523 | None:intergenic | 40.0% | |
| TAGTCAGGGTAATAGTTCAG+TGG | - | chr4_4:63984872-63984891 | None:intergenic | 40.0% | |
| ACCTTAACACAGAAAGGGAT+CGG | - | chr4_4:63985007-63985026 | None:intergenic | 40.0% | |
| AAGCCACCTTAACACAGAAA+GGG | - | chr4_4:63985012-63985031 | None:intergenic | 40.0% | |
| TGACCTTGTATCTCAAGATG+AGG | + | chr4_4:63985159-63985178 | Msa0694650:CDS | 40.0% | |
| ATGAGGAGGACATTGAAAGT+GGG | + | chr4_4:63985176-63985195 | Msa0694650:CDS | 40.0% | |
| ATGGAAATATCCCAGGCAAA+CGG | - | chr4_4:63985309-63985328 | None:intergenic | 40.0% | |
| GAAGAAGATGGAAATATCCC+AGG | - | chr4_4:63985316-63985335 | None:intergenic | 40.0% | |
| ! | AAAGCGCTATATCACTTCTC+AGG | + | chr4_4:63985411-63985430 | Msa0694650:CDS | 40.0% |
| GGTTCTTACTTGATCTCATC+AGG | + | chr4_4:63985432-63985451 | Msa0694650:intron | 40.0% | |
| AGCACCTTGTAGTTCTTTCT+AGG | - | chr4_4:63985576-63985595 | None:intergenic | 40.0% | |
| AAAAGCCGTTAAGAATCGCA+AGG | + | chr4_4:63985707-63985726 | Msa0694650:CDS | 40.0% | |
| AAAGCCGTTAAGAATCGCAA+GGG | + | chr4_4:63985708-63985727 | Msa0694650:CDS | 40.0% | |
| ! | TCAGTCGAAGTATCAGATTC+AGG | + | chr4_4:63985799-63985818 | Msa0694650:CDS | 40.0% |
| GTGATGAGGTTCAAAATTGG+TGG | - | chr4_4:63985872-63985891 | None:intergenic | 40.0% | |
| CAGGTGATGAGGTTCAAAAT+TGG | - | chr4_4:63985875-63985894 | None:intergenic | 40.0% | |
| GAAAGTGAGAAGTAACGCAG+GGG | - | chr4_4:63977819-63977838 | None:intergenic | 45.0% | |
| CGAAAGTGAGAAGTAACGCA+GGG | - | chr4_4:63977820-63977839 | None:intergenic | 45.0% | |
| ACGAAAGTGAGAAGTAACGC+AGG | - | chr4_4:63977821-63977840 | None:intergenic | 45.0% | |
| CTTTCGTCTTCTTCAACCTC+CGG | + | chr4_4:63977834-63977853 | Msa0694650:five_prime_UTR | 45.0% | |
| GAATAGAGAGCAAATACCGG+AGG | - | chr4_4:63977853-63977872 | None:intergenic | 45.0% | |
| TACAGAATGGCGAAGAAAGG+AGG | + | chr4_4:63977914-63977933 | Msa0694650:exon | 45.0% | |
| AAAGTTATAACGGTCGCGTC+GGG | - | chr4_4:63977984-63978003 | None:intergenic | 45.0% | |
| GATTCGCAGTTCATAAGCAG+AGG | + | chr4_4:63978124-63978143 | Msa0694650:intron | 45.0% | |
| ! | GGGTCTTTTTGTATCTCGGA+GGG | - | chr4_4:63978533-63978552 | None:intergenic | 45.0% |
| ! | TGGGTCTTTTTGTATCTCGG+AGG | - | chr4_4:63978534-63978553 | None:intergenic | 45.0% |
| ACAGAACACTGCCAATGCTT+GGG | - | chr4_4:63978553-63978572 | None:intergenic | 45.0% | |
| AACAGAACACTGCCAATGCT+TGG | - | chr4_4:63978554-63978573 | None:intergenic | 45.0% | |
| ! | TTGCATGGTGGAGATGAAGA+CGG | + | chr4_4:63978768-63978787 | Msa0694650:CDS | 45.0% |
| !! | GTTGGAAGAAAGCACCGATA+TGG | + | chr4_4:63978834-63978853 | Msa0694650:CDS | 45.0% |
| ! | GCTACAATCAAGTGATGACG+AGG | + | chr4_4:63978999-63979018 | Msa0694650:intron | 45.0% |
| GGATCTGAGTGCTTTGTCAA+AGG | + | chr4_4:63979300-63979319 | Msa0694650:CDS | 45.0% | |
| TCTGAGTGCTTTGTCAAAGG+AGG | + | chr4_4:63979303-63979322 | Msa0694650:CDS | 45.0% | |
| AGGAGCGAATGGAGGAAATT+TGG | + | chr4_4:63979576-63979595 | Msa0694650:intron | 45.0% | |
| !! | GGAGGAAATTTGGTGTTCAC+GGG | + | chr4_4:63979586-63979605 | Msa0694650:intron | 45.0% |
| !! | GAGGAAATTTGGTGTTCACG+GGG | + | chr4_4:63979587-63979606 | Msa0694650:intron | 45.0% |
| !! | AGATTTCTACTGGGTTGGTC+AGG | - | chr4_4:63979875-63979894 | None:intergenic | 45.0% |
| AGCTGAGATTTCTACTGGGT+TGG | - | chr4_4:63979880-63979899 | None:intergenic | 45.0% | |
| ! | TGCTGATTGCCATTGCTTTG+AGG | + | chr4_4:63979952-63979971 | Msa0694650:intron | 45.0% |
| CATCGTGACTATCTTGGCAA+TGG | - | chr4_4:63980092-63980111 | None:intergenic | 45.0% | |
| TCCTAGCATCGTGACTATCT+TGG | - | chr4_4:63980098-63980117 | None:intergenic | 45.0% | |
| TGGATGCATGTCTACCTTGA+GGG | + | chr4_4:63980232-63980251 | Msa0694650:intron | 45.0% | |
| ! | GAGCCTGATCCAATTTTGTC+AGG | - | chr4_4:63980270-63980289 | None:intergenic | 45.0% |
| ! | GGCTCCCTTTATTGCTGTTA+TGG | + | chr4_4:63980285-63980304 | Msa0694650:intron | 45.0% |
| CTGCCCCAGAATTAGTTGAT+TGG | + | chr4_4:63980442-63980461 | Msa0694650:CDS | 45.0% | |
| GACTTGGAATGGCATATTGC+CGG | + | chr4_4:63980734-63980753 | Msa0694650:intron | 45.0% | |
| TATTGCCGGAAAATGGTTCC+GGG | + | chr4_4:63980748-63980767 | Msa0694650:intron | 45.0% | |
| GGGGAAATAGTTATGGAAGG+AGG | + | chr4_4:63981249-63981268 | Msa0694650:CDS | 45.0% | |
| TACCTTCTACTCAAGTCCGA+AGG | + | chr4_4:63981333-63981352 | Msa0694650:CDS | 45.0% | |
| ACCTTCTACTCAAGTCCGAA+GGG | + | chr4_4:63981334-63981353 | Msa0694650:CDS | 45.0% | |
| TCTTCAAGGCGAGCTATTAC+AGG | - | chr4_4:63981378-63981397 | None:intergenic | 45.0% | |
| ! | GCTAGCATCTGTGACTTGTA+AGG | + | chr4_4:63981439-63981458 | Msa0694650:intron | 45.0% |
| !! | CAGTGCTTTGATTGGGTTGA+AGG | - | chr4_4:63981653-63981672 | None:intergenic | 45.0% |
| CTTCAACCCAATCAAAGCAC+TGG | + | chr4_4:63981651-63981670 | Msa0694650:intron | 45.0% | |
| GCTAACCCAGTGCTTTGATT+GGG | - | chr4_4:63981660-63981679 | None:intergenic | 45.0% | |
| !! | CAATCAAAGCACTGGGTTAG+CGG | + | chr4_4:63981659-63981678 | Msa0694650:intron | 45.0% |
| GACAACACACTGTTTGGTCA+AGG | - | chr4_4:63981874-63981893 | None:intergenic | 45.0% | |
| AAATCACTGTAAATCGGGGG+TGG | - | chr4_4:63982039-63982058 | None:intergenic | 45.0% | |
| TGAAGTATAACCGTCAACCC+AGG | - | chr4_4:63982132-63982151 | None:intergenic | 45.0% | |
| GATCAGCTATGCATCCAAAC+TGG | - | chr4_4:63982190-63982209 | None:intergenic | 45.0% | |
| TGGTAGCCATGCTTACACTA+TGG | + | chr4_4:63982694-63982713 | Msa0694650:intron | 45.0% | |
| TAGCCATGCTTACACTATGG+AGG | + | chr4_4:63982697-63982716 | Msa0694650:intron | 45.0% | |
| AGTCCTCCATAGTGTAAGCA+TGG | - | chr4_4:63982703-63982722 | None:intergenic | 45.0% | |
| TGAATCACCAGAAGAAGCAG+TGG | + | chr4_4:63983041-63983060 | Msa0694650:CDS | 45.0% | |
| ATCACTACCACTGCTTCTTC+TGG | - | chr4_4:63983051-63983070 | None:intergenic | 45.0% | |
| TTGCACCTTAACATGGCAGA+AGG | + | chr4_4:63983322-63983341 | Msa0694650:intron | 45.0% | |
| GTGATCCTTCTGCCATGTTA+AGG | - | chr4_4:63983330-63983349 | None:intergenic | 45.0% | |
| ACATGGCAGAAGGATCACAT+TGG | + | chr4_4:63983332-63983351 | Msa0694650:intron | 45.0% | |
| GTGAAGCTATACCCATTAGC+TGG | - | chr4_4:63983473-63983492 | None:intergenic | 45.0% | |
| TTACTTGAGACAAGACCAGC+TGG | - | chr4_4:63983616-63983635 | None:intergenic | 45.0% | |
| ! | TCGGTGTTTGATTGTACCCT+AGG | + | chr4_4:63983817-63983836 | Msa0694650:intron | 45.0% |
| !! | GGACTTCATGTTGGTTTCTC+AGG | - | chr4_4:63983876-63983895 | None:intergenic | 45.0% |
| ACATTGATAAGGTTTCCGGC+AGG | - | chr4_4:63984088-63984107 | None:intergenic | 45.0% | |
| TGCCGGAAACCTTATCAATG+TGG | + | chr4_4:63984087-63984106 | Msa0694650:intron | 45.0% | |
| GCCGGAAACCTTATCAATGT+GGG | + | chr4_4:63984088-63984107 | Msa0694650:intron | 45.0% | |
| TCTGACTCTGATACCACTGT+TGG | + | chr4_4:63984266-63984285 | Msa0694650:intron | 45.0% | |
| CTGACTCTGATACCACTGTT+GGG | + | chr4_4:63984267-63984286 | Msa0694650:intron | 45.0% | |
| GTTGATGCCAACGGTAACAT+TGG | - | chr4_4:63984335-63984354 | None:intergenic | 45.0% | |
| AACAACGTAGTGAAGAGCAG+TGG | + | chr4_4:63984360-63984379 | Msa0694650:intron | 45.0% | |
| ACAACGTAGTGAAGAGCAGT+GGG | + | chr4_4:63984361-63984380 | Msa0694650:intron | 45.0% | |
| GACGTGGTAAGGGTTGAATT+AGG | + | chr4_4:63984503-63984522 | Msa0694650:intron | 45.0% | |
| AGTGGTCAGCATCAGTTTCT+AGG | - | chr4_4:63984854-63984873 | None:intergenic | 45.0% | |
| TCCGATCCCTTTCTGTGTTA+AGG | + | chr4_4:63985003-63985022 | Msa0694650:intron | 45.0% | |
| GATCCCTTTCTGTGTTAAGG+TGG | + | chr4_4:63985006-63985025 | Msa0694650:intron | 45.0% | |
| GAAGCCACCTTAACACAGAA+AGG | - | chr4_4:63985013-63985032 | None:intergenic | 45.0% | |
| TTCTGTGTTAAGGTGGCTTC+TGG | + | chr4_4:63985013-63985032 | Msa0694650:intron | 45.0% | |
| TCACGAATAGCGTCTCTCTT+AGG | - | chr4_4:63985052-63985071 | None:intergenic | 45.0% | |
| ! | TGGTGCTGGAGTTACAATTG+AGG | + | chr4_4:63985105-63985124 | Msa0694650:CDS | 45.0% |
| CCTCCTCATCTTGAGATACA+AGG | - | chr4_4:63985165-63985184 | None:intergenic | 45.0% | |
| CCTTGTATCTCAAGATGAGG+AGG | + | chr4_4:63985162-63985181 | Msa0694650:CDS | 45.0% | |
| GATGAGGAGGACATTGAAAG+TGG | + | chr4_4:63985175-63985194 | Msa0694650:CDS | 45.0% | |
| TGAGGAGGACATTGAAAGTG+GGG | + | chr4_4:63985177-63985196 | Msa0694650:CDS | 45.0% | |
| TGACCTACTCAACCTCTTCA+AGG | + | chr4_4:63985269-63985288 | Msa0694650:CDS | 45.0% | |
| TCACCTTGAAGAGGTTGAGT+AGG | - | chr4_4:63985275-63985294 | None:intergenic | 45.0% | |
| CTTCGACATCTACAGCACAT+TGG | - | chr4_4:63985511-63985530 | None:intergenic | 45.0% | |
| CTGTAGATGTCGAAGAACAG+AGG | + | chr4_4:63985516-63985535 | Msa0694650:intron | 45.0% | |
| ACTAACTCGTAGTCGCAACA+AGG | + | chr4_4:63985539-63985558 | Msa0694650:CDS | 45.0% | |
| CTGTCCCTTGCGATTCTTAA+CGG | - | chr4_4:63985715-63985734 | None:intergenic | 45.0% | |
| ! | GACAGGTTCAGAGTATCAGA+AGG | + | chr4_4:63985730-63985749 | Msa0694650:CDS | 45.0% |
| AGAAGGCCAAATGCACCTTA+TGG | + | chr4_4:63985747-63985766 | Msa0694650:CDS | 45.0% | |
| AACCTCATCACCTGCTTAGA+TGG | + | chr4_4:63985881-63985900 | Msa0694650:three_prime_UTR | 45.0% | |
| ACCTCATCACCTGCTTAGAT+GGG | + | chr4_4:63985882-63985901 | Msa0694650:three_prime_UTR | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr4_4:63986021-63986040 | None:intergenic | 45.0% |
| GCTACAGACTTCACTGCTCT+TGG | - | chr4_4:63977714-63977733 | None:intergenic | 50.0% | |
| TAACTAGGTTGCTGTGTGCG+AGG | - | chr4_4:63977736-63977755 | None:intergenic | 50.0% | |
| AGAATGGCGAAGAAAGGAGG+AGG | + | chr4_4:63977917-63977936 | Msa0694650:exon | 50.0% | |
| ! | GGCAAGGAGAAGGGCTTTAT+TGG | + | chr4_4:63978409-63978428 | Msa0694650:CDS | 50.0% |
| TGTGGAAACCGACCATGCTT+AGG | - | chr4_4:63979174-63979193 | None:intergenic | 50.0% | |
| GCCAAGATAGTCACGATGCT+AGG | + | chr4_4:63980094-63980113 | Msa0694650:intron | 50.0% | |
| GTGGATGCATGTCTACCTTG+AGG | + | chr4_4:63980231-63980250 | Msa0694650:intron | 50.0% | |
| ATTGCCGGAAAATGGTTCCG+GGG | + | chr4_4:63980749-63980768 | Msa0694650:intron | 50.0% | |
| !! | ATGATCGACTTGCTGCCCTT+CGG | - | chr4_4:63981352-63981371 | None:intergenic | 50.0% |
| AGCTCGCCTTGAAGAGATCA+AGG | + | chr4_4:63981383-63981402 | Msa0694650:CDS | 50.0% | |
| !! | GCTTTGATTGGGTTGAAGGC+CGG | - | chr4_4:63981649-63981668 | None:intergenic | 50.0% |
| CGCTAACCCAGTGCTTTGAT+TGG | - | chr4_4:63981661-63981680 | None:intergenic | 50.0% | |
| CTAACAGTGACCAGGTCATG+CGG | - | chr4_4:63981696-63981715 | None:intergenic | 50.0% | |
| ! | TCAGTAGCAACCTGGGTTGA+CGG | + | chr4_4:63982119-63982138 | Msa0694650:intron | 50.0% |
| AGCTGATCCGATGACTGTAC+CGG | + | chr4_4:63982202-63982221 | Msa0694650:intron | 50.0% | |
| TCACATTGGCGTGCAGAGTT+CGG | + | chr4_4:63983346-63983365 | Msa0694650:CDS | 50.0% | |
| AAGCGTTCGAGACCAGCTAA+TGG | + | chr4_4:63983458-63983477 | Msa0694650:CDS | 50.0% | |
| AGCGTTCGAGACCAGCTAAT+GGG | + | chr4_4:63983459-63983478 | Msa0694650:CDS | 50.0% | |
| TGGGACGGGTCTTCTTCTTT+CGG | + | chr4_4:63983798-63983817 | Msa0694650:intron | 50.0% | |
| CACTTAACACTTCCACCTGC+CGG | + | chr4_4:63984070-63984089 | Msa0694650:intron | 50.0% | |
| TTGATAAGGTTTCCGGCAGG+TGG | - | chr4_4:63984085-63984104 | None:intergenic | 50.0% | |
| ATCCACGCTAAGTGTGTAGG+CGG | - | chr4_4:63984215-63984234 | None:intergenic | 50.0% | |
| TAAGGGTAGCAATGTGGGGA+TGG | - | chr4_4:63984245-63984264 | None:intergenic | 50.0% | |
| GATACCACTGTTGGGACTTC+CGG | + | chr4_4:63984275-63984294 | Msa0694650:intron | 50.0% | |
| ATACCACTGTTGGGACTTCC+GGG | + | chr4_4:63984276-63984295 | Msa0694650:intron | 50.0% | |
| ! | ACAAGTGTTTAAGGCTCCCC+CGG | - | chr4_4:63984297-63984316 | None:intergenic | 50.0% |
| GGGAGCCTTAAACACTTGTG+TGG | + | chr4_4:63984298-63984317 | Msa0694650:intron | 50.0% | |
| CAACGTAGTGAAGAGCAGTG+GGG | + | chr4_4:63984362-63984381 | Msa0694650:intron | 50.0% | |
| GAGACGCTATTCGTGAACGA+CGG | + | chr4_4:63985056-63985075 | Msa0694650:CDS | 50.0% | |
| AGACGCTATTCGTGAACGAC+GGG | + | chr4_4:63985057-63985076 | Msa0694650:CDS | 50.0% | |
| GACGGGAAAGACATGAGAAG+CGG | + | chr4_4:63985074-63985093 | Msa0694650:CDS | 50.0% | |
| ACGGGAAAGACATGAGAAGC+GGG | + | chr4_4:63985075-63985094 | Msa0694650:CDS | 50.0% | |
| AAGACATGAGAAGCGGGTGA+TGG | + | chr4_4:63985081-63985100 | Msa0694650:CDS | 50.0% | |
| GAGGAGGACATTGAAAGTGG+GGG | + | chr4_4:63985178-63985197 | Msa0694650:CDS | 50.0% | |
| AGCTGCAAAACGCTCTGCAA+AGG | + | chr4_4:63985243-63985262 | Msa0694650:CDS | 50.0% | |
| !! | AATTTTGGAGGCCGTTTGCC+TGG | + | chr4_4:63985295-63985314 | Msa0694650:intron | 50.0% |
| !! | ATTTTGGAGGCCGTTTGCCT+GGG | + | chr4_4:63985296-63985315 | Msa0694650:intron | 50.0% |
| ACAGTCTCCTCTGGCAAAGA+GGG | - | chr4_4:63985385-63985404 | None:intergenic | 50.0% | |
| CGTTAAGAATCGCAAGGGAC+AGG | + | chr4_4:63985713-63985732 | Msa0694650:CDS | 50.0% | |
| AGGCCAAATGCACCTTATGG+CGG | + | chr4_4:63985750-63985769 | Msa0694650:CDS | 50.0% | |
| AGTTACACGCCCATCTAAGC+AGG | - | chr4_4:63985894-63985913 | None:intergenic | 50.0% | |
| !! | CGCAGTTGGGAGGGGTATTA+GGG | - | chr4_4:63977776-63977795 | None:intergenic | 55.0% |
| ! | CAGGGGAGTGCAACGTAAGA+CGG | - | chr4_4:63977802-63977821 | None:intergenic | 55.0% |
| CTCGTCGTCCATGTCTTCAG+TGG | - | chr4_4:63978008-63978027 | None:intergenic | 55.0% | |
| ! | GGAGGAAGACGATGATGACG+AGG | + | chr4_4:63978372-63978391 | Msa0694650:CDS | 55.0% |
| ! | AAGTGATGACGAGGCCCCAA+AGG | + | chr4_4:63979008-63979027 | Msa0694650:CDS | 55.0% |
| TGCATGTCTACCTTGAGGGC+AGG | + | chr4_4:63980236-63980255 | Msa0694650:intron | 55.0% | |
| GGATTCAACACCTGCCCTCA+AGG | - | chr4_4:63980249-63980268 | None:intergenic | 55.0% | |
| TCACAGGGTCCCCAATGTCT+CGG | - | chr4_4:63980931-63980950 | None:intergenic | 55.0% | |
| GCCCTTCGGACTTGAGTAGA+AGG | - | chr4_4:63981338-63981357 | None:intergenic | 55.0% | |
| AATCGGGGGTGGAAGAATGC+AGG | - | chr4_4:63982028-63982047 | None:intergenic | 55.0% | |
| ATCCGATGACTGTACCGGAC+CGG | + | chr4_4:63982207-63982226 | Msa0694650:intron | 55.0% | |
| ACCTGACATAACTGCCGGTC+CGG | - | chr4_4:63982224-63982243 | None:intergenic | 55.0% | |
| CCAGGACCTGACATAACTGC+CGG | - | chr4_4:63982229-63982248 | None:intergenic | 55.0% | |
| GCGATAGAATCGGCTGGCAT+TGG | - | chr4_4:63982991-63983010 | None:intergenic | 55.0% | |
| GGTGATTCAGCAGAGACCAG+AGG | - | chr4_4:63983030-63983049 | None:intergenic | 55.0% | |
| ! | GTGGTTGTTAATGGGCCAGC+TGG | + | chr4_4:63983598-63983617 | Msa0694650:CDS | 55.0% |
| GTGGTTGGACACCCTCGTAT+GGG | - | chr4_4:63984134-63984153 | None:intergenic | 55.0% | |
| TGTGGTTGGACACCCTCGTA+TGG | - | chr4_4:63984135-63984154 | None:intergenic | 55.0% | |
| TCCACGCTAAGTGTGTAGGC+GGG | - | chr4_4:63984214-63984233 | None:intergenic | 55.0% | |
| TACCACTGTTGGGACTTCCG+GGG | + | chr4_4:63984277-63984296 | Msa0694650:intron | 55.0% | |
| TTGTTGAGCTAGGTGCGAGG+AGG | + | chr4_4:63984414-63984433 | Msa0694650:intron | 55.0% | |
| CTTACAGGCCGACGTGGTAA+GGG | + | chr4_4:63984493-63984512 | Msa0694650:intron | 55.0% | |
| !! | CATGAGAAGCGGGTGATGGA+TGG | + | chr4_4:63985085-63985104 | Msa0694650:CDS | 55.0% |
| CAGTCTCCTCTGGCAAAGAG+GGG | - | chr4_4:63985384-63985403 | None:intergenic | 55.0% | |
| CACAGTCTCCTCTGGCAAAG+AGG | - | chr4_4:63985386-63985405 | None:intergenic | 55.0% | |
| CTCTTTGCCAGAGGAGACTG+TGG | + | chr4_4:63985384-63985403 | Msa0694650:CDS | 55.0% | |
| TTGCCAGAGGAGACTGTGGA+CGG | + | chr4_4:63985388-63985407 | Msa0694650:CDS | 55.0% | |
| TTTCCGTCCACAGTCTCCTC+TGG | - | chr4_4:63985394-63985413 | None:intergenic | 55.0% | |
| GGCCAAATGCACCTTATGGC+GGG | + | chr4_4:63985751-63985770 | Msa0694650:CDS | 55.0% | |
| GCCAAATGCACCTTATGGCG+GGG | + | chr4_4:63985752-63985771 | Msa0694650:CDS | 55.0% | |
| TCCCCGCCATAAGGTGCATT+TGG | - | chr4_4:63985756-63985775 | None:intergenic | 55.0% | |
| GCCCATCTAAGCAGGTGATG+AGG | - | chr4_4:63985886-63985905 | None:intergenic | 55.0% | |
| !! | GCGCAGTTGGGAGGGGTATT+AGG | - | chr4_4:63977777-63977796 | None:intergenic | 60.0% |
| ! | GGGAGTGCAACGTAAGACGG+CGG | - | chr4_4:63977799-63977818 | None:intergenic | 60.0% |
| TGACGAGGCCCCAAAGGAAG+AGG | + | chr4_4:63979014-63979033 | Msa0694650:CDS | 60.0% | |
| ! | CCGACCCCGGAACCATTTTC+CGG | - | chr4_4:63980756-63980775 | None:intergenic | 60.0% |
| CCGGAAAATGGTTCCGGGGT+CGG | + | chr4_4:63980753-63980772 | Msa0694650:intron | 60.0% | |
| GAAAATGGTTCCGGGGTCGG+TGG | + | chr4_4:63980756-63980775 | Msa0694650:intron | 60.0% | |
| ! | ATTCTAGAGGCCACCGACCC+CGG | - | chr4_4:63980769-63980788 | None:intergenic | 60.0% |
| GAGACATTGGGGACCCTGTG+AGG | + | chr4_4:63980930-63980949 | Msa0694650:intron | 60.0% | |
| !! | GATTGGGTTGAAGGCCGGTC+TGG | - | chr4_4:63981644-63981663 | None:intergenic | 60.0% |
| !! | AAGCACTGGGTTAGCGGCTG+CGG | + | chr4_4:63981665-63981684 | Msa0694650:intron | 60.0% |
| TGCCGGTCCGGTACAGTCAT+CGG | - | chr4_4:63982212-63982231 | None:intergenic | 60.0% | |
| ACCGGACCGGCAGTTATGTC+AGG | + | chr4_4:63982220-63982239 | Msa0694650:intron | 60.0% | |
| CCGGCAGTTATGTCAGGTCC+TGG | + | chr4_4:63982226-63982245 | Msa0694650:intron | 60.0% | |
| ACCCGCCTACACACTTAGCG+TGG | + | chr4_4:63984210-63984229 | Msa0694650:intron | 60.0% | |
| ACCACTGTTGGGACTTCCGG+GGG | + | chr4_4:63984278-63984297 | Msa0694650:intron | 60.0% | |
| CGTAGTGAAGAGCAGTGGGG+CGG | + | chr4_4:63984365-63984384 | Msa0694650:intron | 60.0% | |
| GTAGTGAAGAGCAGTGGGGC+GGG | + | chr4_4:63984366-63984385 | Msa0694650:intron | 60.0% | |
| CGGTTGTTGAGCTAGGTGCG+AGG | + | chr4_4:63984411-63984430 | Msa0694650:intron | 60.0% | |
| AGTGGCCCACCTCACCTTAC+AGG | + | chr4_4:63984478-63984497 | Msa0694650:intron | 60.0% | |
| GTCGGCCTGTAAGGTGAGGT+GGG | - | chr4_4:63984486-63984505 | None:intergenic | 60.0% | |
| CCTTACCACGTCGGCCTGTA+AGG | - | chr4_4:63984495-63984514 | None:intergenic | 60.0% | |
| CCTTACAGGCCGACGTGGTA+AGG | + | chr4_4:63984492-63984511 | Msa0694650:intron | 60.0% | |
| !! | AAGCGGGTGATGGATGGTGC+TGG | + | chr4_4:63985091-63985110 | Msa0694650:CDS | 60.0% |
| AGCTGTCCCCTCTTTGCCAG+AGG | + | chr4_4:63985375-63985394 | Msa0694650:CDS | 60.0% | |
| ! | CCAGTGGATTCCCCGCCATA+AGG | - | chr4_4:63985765-63985784 | None:intergenic | 60.0% |
| ! | CCTTATGGCGGGGAATCCAC+TGG | + | chr4_4:63985762-63985781 | Msa0694650:CDS | 60.0% |
| CGTAAGACGGCGGCGCAGTT+GGG | - | chr4_4:63977789-63977808 | None:intergenic | 65.0% | |
| ACGTAAGACGGCGGCGCAGT+TGG | - | chr4_4:63977790-63977809 | None:intergenic | 65.0% | |
| CACTGATGAGGACGGCGACG+AGG | + | chr4_4:63978351-63978370 | Msa0694650:CDS | 65.0% | |
| TGATGAGGACGGCGACGAGG+AGG | + | chr4_4:63978354-63978373 | Msa0694650:CDS | 65.0% | |
| TGCGGTCACACCGCATGACC+TGG | + | chr4_4:63981683-63981702 | Msa0694650:intron | 65.0% | |
| TCCCCCGGAAGTCCCAACAG+TGG | - | chr4_4:63984282-63984301 | None:intergenic | 65.0% | |
| CGTCGGCCTGTAAGGTGAGG+TGG | - | chr4_4:63984487-63984506 | None:intergenic | 65.0% | |
| CCACGTCGGCCTGTAAGGTG+AGG | - | chr4_4:63984490-63984509 | None:intergenic | 65.0% | |
| CCTCACCTTACAGGCCGACG+TGG | + | chr4_4:63984487-63984506 | Msa0694650:intron | 65.0% | |
| AGACGGCGGCGCAGTTGGGA+GGG | - | chr4_4:63977785-63977804 | None:intergenic | 70.0% | |
| AAGACGGCGGCGCAGTTGGG+AGG | - | chr4_4:63977786-63977805 | None:intergenic | 70.0% | |
| GTGAAGAGCAGTGGGGCGGG+AGG | + | chr4_4:63984369-63984388 | Msa0694650:intron | 70.0% | |
| AAGAGCAGTGGGGCGGGAGG+AGG | + | chr4_4:63984372-63984391 | Msa0694650:intron | 70.0% | |
| AGAGCAGTGGGGCGGGAGGA+GGG | + | chr4_4:63984373-63984392 | Msa0694650:intron | 70.0% | |
| GACGGCGGCGCAGTTGGGAG+GGG | - | chr4_4:63977784-63977803 | None:intergenic | 75.0% | |
| ! | GCAGTGGGGCGGGAGGAGGG+AGG | + | chr4_4:63984376-63984395 | Msa0694650:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 63977690 | 63986088 | 63977690 | ID=Msa0694650;Name=Msa0694650 |
| chr4_4 | mRNA | 63977690 | 63986088 | 63977690 | ID=Msa0694650-mRNA-1;Parent=Msa0694650;Name=Msa0694650-mRNA-1;_AED=0.07;_eAED=0.07;_QI=230|1|1|1|1|1|16|261|657 |
| chr4_4 | exon | 63977690 | 63978037 | 63977690 | ID=Msa0694650-mRNA-1:exon:18153;Parent=Msa0694650-mRNA-1 |
| chr4_4 | exon | 63978133 | 63978224 | 63978133 | ID=Msa0694650-mRNA-1:exon:18154;Parent=Msa0694650-mRNA-1 |
| chr4_4 | exon | 63978334 | 63978436 | 63978334 | ID=Msa0694650-mRNA-1:exon:18155;Parent=Msa0694650-mRNA-1 |
| chr4_4 | exon | 63978739 | 63978878 | 63978739 | ID=Msa0694650-mRNA-1:exon:18156;Parent=Msa0694650-mRNA-1 |
| chr4_4 | exon | 63979000 | 63979137 | 63979000 | ID=Msa0694650-mRNA-1:exon:18157;Parent=Msa0694650-mRNA-1 |
| chr4_4 | exon | 63979268 | 63979347 | 63979268 | ID=Msa0694650-mRNA-1:exon:18158;Parent=Msa0694650-mRNA-1 |
| chr4_4 | exon | 63980440 | 63980527 | 63980440 | ID=Msa0694650-mRNA-1:exon:18159;Parent=Msa0694650-mRNA-1 |
| chr4_4 | exon | 63981240 | 63981419 | 63981240 | ID=Msa0694650-mRNA-1:exon:18160;Parent=Msa0694650-mRNA-1 |
| chr4_4 | exon | 63982889 | 63983062 | 63982889 | ID=Msa0694650-mRNA-1:exon:18161;Parent=Msa0694650-mRNA-1 |
| chr4_4 | exon | 63983166 | 63983243 | 63983166 | ID=Msa0694650-mRNA-1:exon:18162;Parent=Msa0694650-mRNA-1 |
| chr4_4 | exon | 63983341 | 63983480 | 63983341 | ID=Msa0694650-mRNA-1:exon:18163;Parent=Msa0694650-mRNA-1 |
| chr4_4 | exon | 63983564 | 63983675 | 63983564 | ID=Msa0694650-mRNA-1:exon:18164;Parent=Msa0694650-mRNA-1 |
| chr4_4 | exon | 63985025 | 63985290 | 63985025 | ID=Msa0694650-mRNA-1:exon:18165;Parent=Msa0694650-mRNA-1 |
| chr4_4 | exon | 63985369 | 63985432 | 63985369 | ID=Msa0694650-mRNA-1:exon:18166;Parent=Msa0694650-mRNA-1 |
| chr4_4 | exon | 63985522 | 63985590 | 63985522 | ID=Msa0694650-mRNA-1:exon:18167;Parent=Msa0694650-mRNA-1 |
| chr4_4 | exon | 63985696 | 63986088 | 63985696 | ID=Msa0694650-mRNA-1:exon:18168;Parent=Msa0694650-mRNA-1 |
| chr4_4 | five_prime_UTR | 63977690 | 63977919 | 63977690 | ID=Msa0694650-mRNA-1:five_prime_utr;Parent=Msa0694650-mRNA-1 |
| chr4_4 | CDS | 63977920 | 63978037 | 63977920 | ID=Msa0694650-mRNA-1:cds;Parent=Msa0694650-mRNA-1 |
| chr4_4 | CDS | 63978133 | 63978224 | 63978133 | ID=Msa0694650-mRNA-1:cds;Parent=Msa0694650-mRNA-1 |
| chr4_4 | CDS | 63978334 | 63978436 | 63978334 | ID=Msa0694650-mRNA-1:cds;Parent=Msa0694650-mRNA-1 |
| chr4_4 | CDS | 63978739 | 63978878 | 63978739 | ID=Msa0694650-mRNA-1:cds;Parent=Msa0694650-mRNA-1 |
| chr4_4 | CDS | 63979000 | 63979137 | 63979000 | ID=Msa0694650-mRNA-1:cds;Parent=Msa0694650-mRNA-1 |
| chr4_4 | CDS | 63979268 | 63979347 | 63979268 | ID=Msa0694650-mRNA-1:cds;Parent=Msa0694650-mRNA-1 |
| chr4_4 | CDS | 63980440 | 63980527 | 63980440 | ID=Msa0694650-mRNA-1:cds;Parent=Msa0694650-mRNA-1 |
| chr4_4 | CDS | 63981240 | 63981419 | 63981240 | ID=Msa0694650-mRNA-1:cds;Parent=Msa0694650-mRNA-1 |
| chr4_4 | CDS | 63982889 | 63983062 | 63982889 | ID=Msa0694650-mRNA-1:cds;Parent=Msa0694650-mRNA-1 |
| chr4_4 | CDS | 63983166 | 63983243 | 63983166 | ID=Msa0694650-mRNA-1:cds;Parent=Msa0694650-mRNA-1 |
| chr4_4 | CDS | 63983341 | 63983480 | 63983341 | ID=Msa0694650-mRNA-1:cds;Parent=Msa0694650-mRNA-1 |
| chr4_4 | CDS | 63983564 | 63983675 | 63983564 | ID=Msa0694650-mRNA-1:cds;Parent=Msa0694650-mRNA-1 |
| chr4_4 | CDS | 63985025 | 63985290 | 63985025 | ID=Msa0694650-mRNA-1:cds;Parent=Msa0694650-mRNA-1 |
| chr4_4 | CDS | 63985369 | 63985432 | 63985369 | ID=Msa0694650-mRNA-1:cds;Parent=Msa0694650-mRNA-1 |
| chr4_4 | CDS | 63985522 | 63985590 | 63985522 | ID=Msa0694650-mRNA-1:cds;Parent=Msa0694650-mRNA-1 |
| chr4_4 | CDS | 63985696 | 63985827 | 63985696 | ID=Msa0694650-mRNA-1:cds;Parent=Msa0694650-mRNA-1 |
| chr4_4 | three_prime_UTR | 63985828 | 63986088 | 63985828 | ID=Msa0694650-mRNA-1:three_prime_utr;Parent=Msa0694650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
