Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082170 | XP_013450385.1 | 99.543 | 219 | 1 | 0 | 1 | 219 | 1 | 219 | 1.91e-155 | 439 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082170 | sp|Q9LUQ6|RL192_ARATH | 84.466 | 206 | 29 | 1 | 1 | 203 | 1 | 206 | 8.35e-123 | 349 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082170 | I3SA92 | 99.543 | 219 | 1 | 0 | 1 | 219 | 1 | 219 | 9.11e-156 | 439 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa1082170 | 0.846827 | 1.700200e-59 | -8.615850e-47 |
| Msa0003330 | Msa1082170 | 0.867304 | 1.510925e-65 | -8.615850e-47 |
| Msa0003870 | Msa1082170 | 0.803963 | 2.712425e-49 | -8.615850e-47 |
| Msa0027590 | Msa1082170 | 0.890145 | 1.283327e-73 | -8.615850e-47 |
| Msa0032780 | Msa1082170 | 0.838846 | 2.255805e-57 | -8.615850e-47 |
| Msa0040220 | Msa1082170 | 0.827234 | 1.750868e-54 | -8.615850e-47 |
| Msa0045730 | Msa1082170 | 0.814944 | 1.190092e-51 | -8.615850e-47 |
| Msa0072570 | Msa1082170 | 0.852011 | 6.104928e-61 | -8.615850e-47 |
| Msa0075350 | Msa1082170 | 0.887372 | 1.512303e-72 | -8.615850e-47 |
| Msa0087910 | Msa1082170 | 0.817055 | 4.021043e-52 | -8.615850e-47 |
| Msa0089120 | Msa1082170 | 0.815010 | 1.150934e-51 | -8.615850e-47 |
| Msa0100420 | Msa1082170 | 0.806976 | 6.333285e-50 | -8.615850e-47 |
| Msa0114570 | Msa1082170 | 0.847150 | 1.387421e-59 | -8.615850e-47 |
| Msa0604960 | Msa1082170 | 0.820015 | 8.574969e-53 | -8.615850e-47 |
| Msa0617540 | Msa1082170 | 0.836145 | 1.111076e-56 | -8.615850e-47 |
| Msa0619230 | Msa1082170 | 0.802559 | 5.297710e-49 | -8.615850e-47 |
| Msa0622230 | Msa1082170 | 0.830378 | 3.038294e-55 | -8.615850e-47 |
| Msa0622750 | Msa1082170 | 0.812627 | 3.855128e-51 | -8.615850e-47 |
| Msa0623370 | Msa1082170 | 0.818823 | 1.602739e-52 | -8.615850e-47 |
| Msa0643820 | Msa1082170 | 0.863044 | 3.295937e-64 | -8.615850e-47 |
| Msa0649890 | Msa1082170 | 0.801840 | 7.448484e-49 | -8.615850e-47 |
| Msa0652090 | Msa1082170 | 0.808764 | 2.638251e-50 | -8.615850e-47 |
| Msa0653060 | Msa1082170 | 0.804662 | 1.939833e-49 | -8.615850e-47 |
| Msa0654520 | Msa1082170 | -0.804515 | 2.082122e-49 | -8.615850e-47 |
| Msa0681220 | Msa1082170 | 0.842851 | 2.009069e-58 | -8.615850e-47 |
| Msa0694400 | Msa1082170 | 0.804071 | 2.575348e-49 | -8.615850e-47 |
| Msa0694650 | Msa1082170 | 0.811206 | 7.860980e-51 | -8.615850e-47 |
| Msa0705800 | Msa1082170 | 0.904971 | 7.017705e-80 | -8.615850e-47 |
| Msa0712610 | Msa1082170 | 0.882776 | 7.842658e-71 | -8.615850e-47 |
| Msa0717380 | Msa1082170 | 0.838971 | 2.094278e-57 | -8.615850e-47 |
| Msa0748350 | Msa1082170 | 0.827993 | 1.150570e-54 | -8.615850e-47 |
| Msa0752910 | Msa1082170 | 0.811546 | 6.632054e-51 | -8.615850e-47 |
| Msa0758420 | Msa1082170 | 0.855023 | 8.332384e-62 | -8.615850e-47 |
| Msa0781080 | Msa1082170 | 0.871988 | 4.492176e-67 | -8.615850e-47 |
| Msa0781310 | Msa1082170 | 0.823349 | 1.453390e-53 | -8.615850e-47 |
| Msa0786650 | Msa1082170 | 0.803029 | 4.236814e-49 | -8.615850e-47 |
| Msa0786660 | Msa1082170 | 0.819560 | 1.089244e-52 | -8.615850e-47 |
| Msa0788380 | Msa1082170 | 0.892379 | 1.675406e-74 | -8.615850e-47 |
| Msa0792420 | Msa1082170 | 0.827305 | 1.684059e-54 | -8.615850e-47 |
| Msa0799830 | Msa1082170 | 0.849354 | 3.413003e-60 | -8.615850e-47 |
| Msa0822580 | Msa1082170 | 0.920833 | 7.749684e-88 | -8.615850e-47 |
| Msa0827380 | Msa1082170 | 0.833123 | 6.388549e-56 | -8.615850e-47 |
| Msa0838070 | Msa1082170 | 0.879867 | 8.776064e-70 | -8.615850e-47 |
| Msa0122550 | Msa1082170 | 0.801989 | 6.938702e-49 | -8.615850e-47 |
| Msa0128330 | Msa1082170 | 0.806088 | 9.749261e-50 | -8.615850e-47 |
| Msa0134580 | Msa1082170 | 0.829486 | 5.011447e-55 | -8.615850e-47 |
| Msa0138890 | Msa1082170 | 0.861922 | 7.297593e-64 | -8.615850e-47 |
| Msa0167860 | Msa1082170 | 0.832276 | 1.037008e-55 | -8.615850e-47 |
| Msa0168320 | Msa1082170 | 0.818978 | 1.477945e-52 | -8.615850e-47 |
| Msa0172930 | Msa1082170 | 0.827493 | 1.517266e-54 | -8.615850e-47 |
| Msa0175000 | Msa1082170 | 0.819041 | 1.430006e-52 | -8.615850e-47 |
| Msa0191450 | Msa1082170 | 0.893621 | 5.298996e-75 | -8.615850e-47 |
| Msa0191550 | Msa1082170 | 0.875738 | 2.431390e-68 | -8.615850e-47 |
| Msa0192750 | Msa1082170 | 0.816843 | 4.485899e-52 | -8.615850e-47 |
| Msa0194940 | Msa1082170 | 0.842874 | 1.980736e-58 | -8.615850e-47 |
| Msa0195030 | Msa1082170 | 0.803333 | 3.664551e-49 | -8.615850e-47 |
| Msa0210360 | Msa1082170 | 0.824869 | 6.389695e-54 | -8.615850e-47 |
| Msa0223440 | Msa1082170 | 0.809998 | 1.433839e-50 | -8.615850e-47 |
| Msa0229150 | Msa1082170 | 0.821685 | 3.540707e-53 | -8.615850e-47 |
| Msa0369410 | Msa1082170 | 0.826964 | 2.031190e-54 | -8.615850e-47 |
| Msa0376830 | Msa1082170 | 0.834481 | 2.923773e-56 | -8.615850e-47 |
| Msa0377520 | Msa1082170 | 0.851099 | 1.106101e-60 | -8.615850e-47 |
| Msa0382670 | Msa1082170 | 0.803940 | 2.742015e-49 | -8.615850e-47 |
| Msa0426090 | Msa1082170 | 0.857475 | 1.591788e-62 | -8.615850e-47 |
| Msa0426250 | Msa1082170 | 0.825388 | 4.817968e-54 | -8.615850e-47 |
| Msa0436750 | Msa1082170 | 0.815097 | 1.100934e-51 | -8.615850e-47 |
| Msa0463520 | Msa1082170 | 0.823492 | 1.345302e-53 | -8.615850e-47 |
| Msa0468660 | Msa1082170 | 0.815128 | 1.083353e-51 | -8.615850e-47 |
| Msa0472480 | Msa1082170 | 0.862275 | 5.688891e-64 | -8.615850e-47 |
| Msa0475810 | Msa1082170 | 0.823864 | 1.101103e-53 | -8.615850e-47 |
| Msa0481520 | Msa1082170 | 0.896053 | 5.332541e-76 | -8.615850e-47 |
| Msa0481850 | Msa1082170 | 0.827936 | 1.188104e-54 | -8.615850e-47 |
| Msa1021120 | Msa1082170 | 0.833320 | 5.707788e-56 | -8.615850e-47 |
| Msa1037290 | Msa1082170 | 0.889947 | 1.533445e-73 | -8.615850e-47 |
| Msa1040160 | Msa1082170 | 0.865350 | 6.293281e-65 | -8.615850e-47 |
| Msa1041680 | Msa1082170 | 0.850555 | 1.573934e-60 | -8.615850e-47 |
| Msa1042100 | Msa1082170 | 0.848178 | 7.234546e-60 | -8.615850e-47 |
| Msa1054280 | Msa1082170 | 0.855508 | 6.021047e-62 | -8.615850e-47 |
| Msa1058700 | Msa1082170 | 0.832266 | 1.042979e-55 | -8.615850e-47 |
| Msa1080350 | Msa1082170 | 0.806814 | 6.850389e-50 | -8.615850e-47 |
| Msa1082170 | Msa1083370 | 0.856984 | 2.223085e-62 | -8.615850e-47 |
| Msa1082170 | Msa1089220 | 0.821093 | 4.849613e-53 | -8.615850e-47 |
| Msa1082170 | Msa1096900 | 0.841869 | 3.657769e-58 | -8.615850e-47 |
| Msa1082170 | Msa1115590 | 0.812046 | 5.162994e-51 | -8.615850e-47 |
| Msa1082170 | Msa1126520 | 0.913648 | 4.823051e-84 | -8.615850e-47 |
| Msa1082170 | Msa1164150 | 0.895406 | 9.880654e-76 | -8.615850e-47 |
| Msa1082170 | Msa1165640 | 0.837165 | 6.105936e-57 | -8.615850e-47 |
| Msa1082170 | Msa1166570 | 0.856050 | 4.179300e-62 | -8.615850e-47 |
| Msa1082170 | Msa1167540 | 0.829046 | 6.406656e-55 | -8.615850e-47 |
| Msa1082170 | Msa1180000 | 0.842086 | 3.205949e-58 | -8.615850e-47 |
| Msa1082170 | Msa1186030 | 0.878990 | 1.794688e-69 | -8.615850e-47 |
| Msa1082170 | Msa1218170 | 0.891529 | 3.654613e-74 | -8.615850e-47 |
| Msa1082170 | Msa1236980 | 0.822682 | 2.078388e-53 | -8.615850e-47 |
| Msa1082170 | Msa1240270 | 0.890622 | 8.337733e-74 | -8.615850e-47 |
| Msa1082170 | Msa1256840 | 0.815743 | 7.907341e-52 | -8.615850e-47 |
| Msa1082170 | Msa1258540 | 0.862447 | 5.035017e-64 | -8.615850e-47 |
| Msa1082170 | Msa1263620 | 0.811291 | 7.536509e-51 | -8.615850e-47 |
| Msa1082170 | Msa1270640 | 0.838689 | 2.477444e-57 | -8.615850e-47 |
| Msa1082170 | Msa1270710 | 0.834773 | 2.468795e-56 | -8.615850e-47 |
| Msa1082170 | Msa1278070 | 0.820372 | 7.100577e-53 | -8.615850e-47 |
| Msa1082170 | Msa1311400 | 0.840922 | 6.494593e-58 | -8.615850e-47 |
| Msa1082170 | Msa1332250 | 0.829425 | 5.183844e-55 | -8.615850e-47 |
| Msa1082170 | Msa1352140 | 0.812906 | 3.348329e-51 | -8.615850e-47 |
| Msa1082170 | Msa1356790 | 0.874780 | 5.168848e-68 | -8.615850e-47 |
| Msa1082170 | Msa1362790 | 0.818119 | 2.314377e-52 | -8.615850e-47 |
| Msa1082170 | Msa1364110 | 0.841274 | 5.246932e-58 | -8.615850e-47 |
| Msa1082170 | Msa1368920 | 0.891009 | 5.870841e-74 | -8.615850e-47 |
| Msa1082170 | Msa1374240 | 0.845730 | 3.383613e-59 | -8.615850e-47 |
| Msa1082170 | Msa1392590 | 0.877742 | 4.922964e-69 | -8.615850e-47 |
| Msa1082170 | Msa1403910 | 0.832585 | 8.689987e-56 | -8.615850e-47 |
| Msa1082170 | Msa1406080 | 0.844360 | 7.933543e-59 | -8.615850e-47 |
| Msa1082170 | Msa1418770 | 0.833065 | 6.604188e-56 | -8.615850e-47 |
| Msa1082170 | Msa1446410 | 0.839244 | 1.779142e-57 | -8.615850e-47 |
| Msa1082170 | Msa1449160 | 0.830259 | 3.247563e-55 | -8.615850e-47 |
| Msa1082170 | Msa1463570 | 0.815297 | 9.937415e-52 | -8.615850e-47 |
| Msa1082170 | Msa1463580 | 0.808887 | 2.482683e-50 | -8.615850e-47 |
| Msa0239420 | Msa1082170 | 0.846931 | 1.593093e-59 | -8.615850e-47 |
| Msa0265250 | Msa1082170 | 0.824031 | 1.005869e-53 | -8.615850e-47 |
| Msa0281370 | Msa1082170 | 0.830383 | 3.029691e-55 | -8.615850e-47 |
| Msa0297830 | Msa1082170 | 0.841769 | 3.885858e-58 | -8.615850e-47 |
| Msa0301220 | Msa1082170 | 0.837438 | 5.197504e-57 | -8.615850e-47 |
| Msa0301250 | Msa1082170 | 0.802118 | 6.529292e-49 | -8.615850e-47 |
| Msa0313060 | Msa1082170 | 0.808498 | 3.006634e-50 | -8.615850e-47 |
| Msa0315430 | Msa1082170 | 0.843414 | 1.421812e-58 | -8.615850e-47 |
| Msa0335840 | Msa1082170 | 0.849661 | 2.801824e-60 | -8.615850e-47 |
| Msa0484730 | Msa1082170 | 0.807845 | 4.143123e-50 | -8.615850e-47 |
| Msa0517480 | Msa1082170 | 0.860584 | 1.865004e-63 | -8.615850e-47 |
| Msa0529900 | Msa1082170 | 0.812482 | 4.146738e-51 | -8.615850e-47 |
| Msa0540480 | Msa1082170 | 0.819556 | 1.091408e-52 | -8.615850e-47 |
| Msa0546030 | Msa1082170 | 0.803253 | 3.808127e-49 | -8.615850e-47 |
| Msa0573550 | Msa1082170 | 0.850393 | 1.748289e-60 | -8.615850e-47 |
| Msa0579830 | Msa1082170 | 0.809370 | 1.956958e-50 | -8.615850e-47 |
| Msa0582070 | Msa1082170 | 0.834674 | 2.615261e-56 | -8.615850e-47 |
| Msa0582320 | Msa1082170 | 0.802846 | 4.621992e-49 | -8.615850e-47 |
| Msa0584030 | Msa1082170 | 0.809831 | 1.557948e-50 | -8.615850e-47 |
| Msa0591050 | Msa1082170 | 0.829283 | 5.613180e-55 | -8.615850e-47 |
| Msa0596370 | Msa1082170 | 0.877921 | 4.263114e-69 | -8.615850e-47 |
| Msa0597240 | Msa1082170 | 0.845696 | 3.456275e-59 | -8.615850e-47 |
| Msa0860860 | Msa1082170 | 0.811382 | 7.198033e-51 | -8.615850e-47 |
| Msa0861320 | Msa1082170 | 0.852015 | 6.089861e-61 | -8.615850e-47 |
| Msa0915540 | Msa1082170 | 0.863217 | 2.914937e-64 | -8.615850e-47 |
| Msa0929680 | Msa1082170 | 0.822014 | 2.971291e-53 | -8.615850e-47 |
| Msa0929700 | Msa1082170 | 0.860093 | 2.625809e-63 | -8.615850e-47 |
| Msa0929790 | Msa1082170 | 0.817886 | 2.612713e-52 | -8.615850e-47 |
| Msa0945480 | Msa1082170 | 0.816456 | 5.480158e-52 | -8.615850e-47 |
| Msa0966670 | Msa1082170 | 0.825642 | 4.193706e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082170 | MtrunA17_Chr7g0269621 | 99.543 | 219 | 1 | 0 | 1 | 219 | 1 | 219 | 1.75e-159 | 439 |
| Msa1082170 | MtrunA17_Chr1g0195141 | 98.925 | 186 | 2 | 0 | 1 | 186 | 1 | 186 | 6.55e-123 | 347 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082170 | AT3G16780.1 | 84.466 | 206 | 29 | 1 | 1 | 203 | 1 | 206 | 8.49e-124 | 349 |
| Msa1082170 | AT1G02780.1 | 91.489 | 188 | 16 | 0 | 1 | 188 | 1 | 188 | 2.07e-116 | 330 |
| Msa1082170 | AT4G02230.1 | 91.489 | 188 | 16 | 0 | 1 | 188 | 1 | 188 | 4.65e-115 | 327 |
| Msa1082170 | AT4G16030.1 | 42.953 | 149 | 33 | 7 | 57 | 194 | 6 | 113 | 1.03e-17 | 76.3 |
Find 78 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCACGGCTGGCCTTGTTCT+TGG | 0.184984 | 7_2:-82152925 | None:intergenic |
| ATAATAGTCCCTGTTCTAAA+TGG | 0.256274 | 7_2:+82153425 | Msa1082170:three_prime_UTR |
| TAACCAGCTTCCTTATGTTT+TGG | 0.262188 | 7_2:-82151845 | None:intergenic |
| CTCTCTAGCCTTCTCAGCTT+TGG | 0.269286 | 7_2:-82152868 | None:intergenic |
| GAGATTTCGTTAACTTCATT+TGG | 0.301140 | 7_2:-82151713 | None:intergenic |
| GGCCTTGTTCTTGGCACGTT+TGG | 0.315875 | 7_2:-82152916 | None:intergenic |
| TGTGGGAAGCCTTGCCTCTC+TGG | 0.339458 | 7_2:-82152685 | None:intergenic |
| AGATTGCTTGGCTGAATTGT+TGG | 0.341299 | 7_2:+82153305 | Msa1082170:exon |
| GATTGCTTGGCTGAATTGTT+GGG | 0.356970 | 7_2:+82153306 | Msa1082170:three_prime_UTR |
| TTGTAAAATGTTTAGGGTCC+TGG | 0.366808 | 7_2:+82153093 | Msa1082170:intron |
| AAAGGAAGACACTCTGGATA+TGG | 0.389292 | 7_2:+82151945 | Msa1082170:CDS |
| AGTGCGGTCGTGGCAAAGTT+TGG | 0.396257 | 7_2:+82151684 | Msa1082170:CDS |
| CGCTGCAGTCTGAGATTGCT+TGG | 0.398433 | 7_2:+82153293 | Msa1082170:exon |
| AGCAAAACACCATTTAGAAC+AGG | 0.406056 | 7_2:-82153434 | None:intergenic |
| ATTGGCTTTGTTGCAGCAAC+AGG | 0.406134 | 7_2:-82153150 | None:intergenic |
| TGACATGTACATGAAGGTTA+AGG | 0.407532 | 7_2:+82152797 | Msa1082170:CDS |
| ATTATAATACTCACTGGGTC+TGG | 0.417470 | 7_2:-82153173 | None:intergenic |
| TTTGAATGTGCATAGGTAAG+AGG | 0.427942 | 7_2:+82152655 | Msa1082170:intron |
| AAACATAAGGAAGCTGGTTA+AGG | 0.436979 | 7_2:+82151848 | Msa1082170:CDS |
| GACGTTTGCTCCGCAAGTAC+CGG | 0.438844 | 7_2:+82152742 | Msa1082170:CDS |
| GACCTTGTCTGACCAGTTTG+AGG | 0.454488 | 7_2:+82152893 | Msa1082170:CDS |
| TCTGCTGGCTTCTCTCCTCC+AGG | 0.456457 | 7_2:-82153111 | None:intergenic |
| AGCGTTCTCAAGTGCGGTCG+TGG | 0.462752 | 7_2:+82151674 | Msa1082170:CDS |
| TTAAGGATGGGTTTATCATC+AGG | 0.469316 | 7_2:+82151865 | Msa1082170:CDS |
| TAAGAATAAGAGAGTTCTGA+TGG | 0.474240 | 7_2:+82152830 | Msa1082170:CDS |
| TGGCACGTTTGGCCTCAAAC+TGG | 0.475046 | 7_2:-82152905 | None:intergenic |
| ACGAGACCTGGAGTGAATCT+TGG | 0.477136 | 7_2:-82151895 | None:intergenic |
| AGCATGCTTCCTCTCACGGC+TGG | 0.480022 | 7_2:-82152937 | None:intergenic |
| AATACTCACTGGGTCTGGAT+TGG | 0.484374 | 7_2:-82153168 | None:intergenic |
| AATAAATCGAGTTGGGGCTA+TGG | 0.487660 | 7_2:-82153549 | None:intergenic |
| GACATGTACATGAAGGTTAA+GGG | 0.489265 | 7_2:+82152798 | Msa1082170:CDS |
| TCCTAGCATGCTTCCTCTCA+CGG | 0.495294 | 7_2:-82152941 | None:intergenic |
| AAGAGGAAAGGAAGACACTC+TGG | 0.516416 | 7_2:+82151939 | Msa1082170:CDS |
| GCAGCACTAGGAGCTTCTGC+TGG | 0.526670 | 7_2:-82153126 | None:intergenic |
| TGTCAATCTTCTTAGCCTCC+CGG | 0.527932 | 7_2:-82152761 | None:intergenic |
| TGAGCAGCAGCTAAGGCAAA+TGG | 0.531210 | 7_2:-82151585 | None:intergenic |
| ACGTTTGCTCCGCAAGTACC+GGG | 0.538079 | 7_2:+82152743 | Msa1082170:CDS |
| TCTTAGCCTCCCGGTACTTG+CGG | 0.539366 | 7_2:-82152752 | None:intergenic |
| CATTCTACGAGCACGAGACC+TGG | 0.539613 | 7_2:-82151907 | None:intergenic |
| ATAAGGAAGCTGGTTAAGGA+TGG | 0.542795 | 7_2:+82151852 | Msa1082170:CDS |
| CACGCATTCTTCTCATCCAA+AGG | 0.547413 | 7_2:-82152713 | None:intergenic |
| GCCGTGAGAGGAAGCATGCT+AGG | 0.550143 | 7_2:+82152940 | Msa1082170:CDS |
| TCACAAGTCCAAAGCTGAGA+AGG | 0.552682 | 7_2:+82152860 | Msa1082170:CDS |
| GTCTCGTGCTCGTAGAATGA+AGG | 0.553438 | 7_2:+82151911 | Msa1082170:CDS |
| ATGAAGGAAGCTAAGAGGAA+AGG | 0.554411 | 7_2:+82151927 | Msa1082170:CDS |
| AATGTGCATAGGTAAGAGGA+AGG | 0.560538 | 7_2:+82152659 | Msa1082170:intron |
| TAAGGAAGCTGGTTAAGGAT+GGG | 0.561785 | 7_2:+82151853 | Msa1082170:CDS |
| GTAGAATGAAGGAAGCTAAG+AGG | 0.564014 | 7_2:+82151922 | Msa1082170:CDS |
| GCAGCAACAGGTGCAGCACT+AGG | 0.565218 | 7_2:-82153138 | None:intergenic |
| ACCGCAAAAGAAATCAAAGA+AGG | 0.568261 | 7_2:+82153269 | Msa1082170:CDS |
| TGAGAGGAAGCATGCTAGGA+GGG | 0.573502 | 7_2:+82152944 | Msa1082170:CDS |
| AGAACAAGGCCAGCCGTGAG+AGG | 0.576244 | 7_2:+82152928 | Msa1082170:CDS |
| AGGCCAAAACATAAGGAAGC+TGG | 0.578002 | 7_2:+82151842 | Msa1082170:intron |
| ACTTGAGAACGCTGGAAGCG+AGG | 0.578193 | 7_2:-82151664 | None:intergenic |
| TTGCAATTTGAGGGAGACCA+TGG | 0.583099 | 7_2:-82151636 | None:intergenic |
| GGCCAAACGTGCCAAGAACA+AGG | 0.590924 | 7_2:+82152914 | Msa1082170:CDS |
| TGTGATGTGAGCAGCAGCTA+AGG | 0.594030 | 7_2:-82151592 | None:intergenic |
| GGCCTCAAACTGGTCAGACA+AGG | 0.594906 | 7_2:-82152895 | None:intergenic |
| TAACCTTCATGTACATGTCA+TGG | 0.601477 | 7_2:-82152794 | None:intergenic |
| AAAATAAATAAATCGAGTTG+GGG | 0.602135 | 7_2:-82153555 | None:intergenic |
| AACCTACCAAGATTCACTCC+AGG | 0.604963 | 7_2:+82151889 | Msa1082170:CDS |
| CTACTTTAGAACAGCAACTG+AGG | 0.612176 | 7_2:-82153336 | None:intergenic |
| TGAAGTTAACGAAATCTCCA+TGG | 0.615795 | 7_2:+82151718 | Msa1082170:CDS |
| ACGACCGCACTTGAGAACGC+TGG | 0.620586 | 7_2:-82151672 | None:intergenic |
| GTGAGAGGAAGCATGCTAGG+AGG | 0.624464 | 7_2:+82152943 | Msa1082170:CDS |
| GCTTCCAGCGTTCTCAAGTG+CGG | 0.631493 | 7_2:+82151668 | Msa1082170:CDS |
| TAAAATGTTTAGGGTCCTGG+AGG | 0.638656 | 7_2:+82153096 | Msa1082170:intron |
| CAAGCAATCTCAGACTGCAG+CGG | 0.641887 | 7_2:-82153292 | None:intergenic |
| TAGCTTACGAGAATTAGCCA+TGG | 0.650085 | 7_2:-82151735 | None:intergenic |
| GTACCATGACATGTACATGA+AGG | 0.655137 | 7_2:+82152791 | Msa1082170:CDS |
| GACCTGGAGTGAATCTTGGT+AGG | 0.656690 | 7_2:-82151891 | None:intergenic |
| GAGGAAGCATGCTAGGAGGG+AGG | 0.658603 | 7_2:+82152947 | Msa1082170:CDS |
| GGAAGGGTACCAGAGAGGCA+AGG | 0.658732 | 7_2:+82152676 | Msa1082170:CDS |
| CAGAAACAAGCAATCAACCA+TGG | 0.677132 | 7_2:+82151619 | Msa1082170:exon |
| TAAGAGGAAGGGTACCAGAG+AGG | 0.678708 | 7_2:+82152671 | Msa1082170:CDS |
| GCAAAACACCATTTAGAACA+GGG | 0.681819 | 7_2:-82153433 | None:intergenic |
| ATGTGCATAGGTAAGAGGAA+GGG | 0.705490 | 7_2:+82152660 | Msa1082170:intron |
| TTTGCTCCGCAAGTACCGGG+AGG | 0.739195 | 7_2:+82152746 | Msa1082170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATTATAAACAAACAAAA+TGG | - | chr7_2:82152112-82152131 | None:intergenic | 10.0% |
| !!! | ATTCTTTTTGAAATTATTAA+TGG | + | chr7_2:82153054-82153073 | Msa1082170:intron | 10.0% |
| !! | ATAATTATAAACAAACAAAA+TGG | - | chr7_2:82152112-82152131 | None:intergenic | 10.0% |
| !!! | ATTCTTTTTGAAATTATTAA+TGG | + | chr7_2:82153054-82153073 | Msa1082170:intron | 10.0% |
| !! | ATCAATTCTTATTATGATTT+AGG | + | chr7_2:82152009-82152028 | Msa1082170:intron | 15.0% |
| !! | TAATAATTGTTTGAAAACTA+TGG | + | chr7_2:82152435-82152454 | Msa1082170:intron | 15.0% |
| !! | AAATAATTTCAAGAAATCAT+AGG | - | chr7_2:82152996-82153015 | None:intergenic | 15.0% |
| !! | AATAAATTATAATACTCACT+GGG | - | chr7_2:82153181-82153200 | None:intergenic | 15.0% |
| !!! | ATGTTTTTATACTTTTCTAA+TGG | + | chr7_2:82153508-82153527 | Msa1082170:three_prime_UTR | 15.0% |
| !! | AAAAATAAATAAATCGAGTT+GGG | - | chr7_2:82153559-82153578 | None:intergenic | 15.0% |
| !! | ATCAATTCTTATTATGATTT+AGG | + | chr7_2:82152009-82152028 | Msa1082170:intron | 15.0% |
| !! | TAATAATTGTTTGAAAACTA+TGG | + | chr7_2:82152435-82152454 | Msa1082170:intron | 15.0% |
| !! | AAATAATTTCAAGAAATCAT+AGG | - | chr7_2:82152996-82153015 | None:intergenic | 15.0% |
| !! | AATAAATTATAATACTCACT+GGG | - | chr7_2:82153181-82153200 | None:intergenic | 15.0% |
| !!! | ATGTTTTTATACTTTTCTAA+TGG | + | chr7_2:82153508-82153527 | Msa1082170:three_prime_UTR | 15.0% |
| !! | AAAAATAAATAAATCGAGTT+GGG | - | chr7_2:82153559-82153578 | None:intergenic | 15.0% |
| !!! | AAAGTTGATTTTGATTTTGT+AGG | + | chr7_2:82151822-82151841 | Msa1082170:intron | 20.0% |
| !! | ATGTATTTCAGTTTACAAAA+TGG | + | chr7_2:82152400-82152419 | Msa1082170:intron | 20.0% |
| !!! | TCATATTTTACAAAACAACA+TGG | - | chr7_2:82152546-82152565 | None:intergenic | 20.0% |
| !!! | CTAAACATTTTACAAAGAAA+CGG | - | chr7_2:82153088-82153107 | None:intergenic | 20.0% |
| !! | GTTTCTTTGTAAAATGTTTA+GGG | + | chr7_2:82153087-82153106 | Msa1082170:intron | 20.0% |
| !! | GAATAAATTATAATACTCAC+TGG | - | chr7_2:82153182-82153201 | None:intergenic | 20.0% |
| !!! | TGTTTAATTTTTCAGTTATC+AGG | + | chr7_2:82153391-82153410 | Msa1082170:three_prime_UTR | 20.0% |
| !!! | TTTTTGTTATGATTTTGTTG+CGG | + | chr7_2:82153458-82153477 | Msa1082170:three_prime_UTR | 20.0% |
| !!! | AAAATAAATAAATCGAGTTG+GGG | - | chr7_2:82153558-82153577 | None:intergenic | 20.0% |
| !!! | AAAGTTGATTTTGATTTTGT+AGG | + | chr7_2:82151822-82151841 | Msa1082170:intron | 20.0% |
| !! | ATGTATTTCAGTTTACAAAA+TGG | + | chr7_2:82152400-82152419 | Msa1082170:intron | 20.0% |
| !!! | TCATATTTTACAAAACAACA+TGG | - | chr7_2:82152546-82152565 | None:intergenic | 20.0% |
| !!! | CTAAACATTTTACAAAGAAA+CGG | - | chr7_2:82153088-82153107 | None:intergenic | 20.0% |
| !! | GTTTCTTTGTAAAATGTTTA+GGG | + | chr7_2:82153087-82153106 | Msa1082170:intron | 20.0% |
| !! | GAATAAATTATAATACTCAC+TGG | - | chr7_2:82153182-82153201 | None:intergenic | 20.0% |
| !!! | TGTTTAATTTTTCAGTTATC+AGG | + | chr7_2:82153391-82153410 | Msa1082170:three_prime_UTR | 20.0% |
| !!! | TTTTTGTTATGATTTTGTTG+CGG | + | chr7_2:82153458-82153477 | Msa1082170:three_prime_UTR | 20.0% |
| !!! | AAAATAAATAAATCGAGTTG+GGG | - | chr7_2:82153558-82153577 | None:intergenic | 20.0% |
| !! | ATTTAAAATGAAGCTAATCG+AGG | - | chr7_2:82151991-82152010 | None:intergenic | 25.0% |
| ! | ACAAACTAATCAATCTAAGA+CGG | - | chr7_2:82152315-82152334 | None:intergenic | 25.0% |
| !!! | TGAAATACATTTTGTTGTGA+CGG | - | chr7_2:82152390-82152409 | None:intergenic | 25.0% |
| ! | GAAATACGAGTTTACATTTA+TGG | + | chr7_2:82152566-82152585 | Msa1082170:intron | 25.0% |
| ! | CGTTTCTTTGTAAAATGTTT+AGG | + | chr7_2:82153086-82153105 | Msa1082170:intron | 25.0% |
| !! | ATTTAAAATGAAGCTAATCG+AGG | - | chr7_2:82151991-82152010 | None:intergenic | 25.0% |
| ! | ACAAACTAATCAATCTAAGA+CGG | - | chr7_2:82152315-82152334 | None:intergenic | 25.0% |
| !!! | TGAAATACATTTTGTTGTGA+CGG | - | chr7_2:82152390-82152409 | None:intergenic | 25.0% |
| ! | GAAATACGAGTTTACATTTA+TGG | + | chr7_2:82152566-82152585 | Msa1082170:intron | 25.0% |
| ! | CGTTTCTTTGTAAAATGTTT+AGG | + | chr7_2:82153086-82153105 | Msa1082170:intron | 25.0% |
| GAGATTTCGTTAACTTCATT+TGG | - | chr7_2:82151716-82151735 | None:intergenic | 30.0% | |
| ! | ATTTTGTAGGCCAAAACATA+AGG | + | chr7_2:82151835-82151854 | Msa1082170:intron | 30.0% |
| !! | GTTAACATTTTGGTGTGAAA+AGG | - | chr7_2:82152359-82152378 | None:intergenic | 30.0% |
| ! | GGAGTGAAAAGTTAACATTT+TGG | - | chr7_2:82152369-82152388 | None:intergenic | 30.0% |
| AAAAACTGTCAACAATTCCA+AGG | - | chr7_2:82152461-82152480 | None:intergenic | 30.0% | |
| ! | TAAGAATAAGAGAGTTCTGA+TGG | + | chr7_2:82152830-82152849 | Msa1082170:CDS | 30.0% |
| TTAAACAATCATGCATAGCA+GGG | - | chr7_2:82153230-82153249 | None:intergenic | 30.0% | |
| TTTAAACAATCATGCATAGC+AGG | - | chr7_2:82153231-82153250 | None:intergenic | 30.0% | |
| ! | ATAATAGTCCCTGTTCTAAA+TGG | + | chr7_2:82153425-82153444 | Msa1082170:three_prime_UTR | 30.0% |
| GAGATTTCGTTAACTTCATT+TGG | - | chr7_2:82151716-82151735 | None:intergenic | 30.0% | |
| ! | ATTTTGTAGGCCAAAACATA+AGG | + | chr7_2:82151835-82151854 | Msa1082170:intron | 30.0% |
| !! | GTTAACATTTTGGTGTGAAA+AGG | - | chr7_2:82152359-82152378 | None:intergenic | 30.0% |
| ! | GGAGTGAAAAGTTAACATTT+TGG | - | chr7_2:82152369-82152388 | None:intergenic | 30.0% |
| AAAAACTGTCAACAATTCCA+AGG | - | chr7_2:82152461-82152480 | None:intergenic | 30.0% | |
| ! | TAAGAATAAGAGAGTTCTGA+TGG | + | chr7_2:82152830-82152849 | Msa1082170:CDS | 30.0% |
| TTAAACAATCATGCATAGCA+GGG | - | chr7_2:82153230-82153249 | None:intergenic | 30.0% | |
| TTTAAACAATCATGCATAGC+AGG | - | chr7_2:82153231-82153250 | None:intergenic | 30.0% | |
| ! | ATAATAGTCCCTGTTCTAAA+TGG | + | chr7_2:82153425-82153444 | Msa1082170:three_prime_UTR | 30.0% |
| TGAAGTTAACGAAATCTCCA+TGG | + | chr7_2:82151718-82151737 | Msa1082170:CDS | 35.0% | |
| ! | TCGATTCGTTATTGTGTAGA+TGG | + | chr7_2:82151793-82151812 | Msa1082170:intron | 35.0% |
| ! | TAACCAGCTTCCTTATGTTT+TGG | - | chr7_2:82151848-82151867 | None:intergenic | 35.0% |
| AAACATAAGGAAGCTGGTTA+AGG | + | chr7_2:82151848-82151867 | Msa1082170:CDS | 35.0% | |
| ! | TTAAGGATGGGTTTATCATC+AGG | + | chr7_2:82151865-82151884 | Msa1082170:CDS | 35.0% |
| AATGAAGCTAATCGAGGTTA+GGG | - | chr7_2:82151985-82152004 | None:intergenic | 35.0% | |
| AAATGAAGCTAATCGAGGTT+AGG | - | chr7_2:82151986-82152005 | None:intergenic | 35.0% | |
| ! | AACTAATCAATCTAAGACGG+TGG | - | chr7_2:82152312-82152331 | None:intergenic | 35.0% |
| TTGTTTGAAAACTATGGCCT+TGG | + | chr7_2:82152441-82152460 | Msa1082170:intron | 35.0% | |
| TTACTGAGTTGCTCATCAAT+TGG | + | chr7_2:82152512-82152531 | Msa1082170:intron | 35.0% | |
| ACGAGTTTACATTTATGGAC+TGG | + | chr7_2:82152571-82152590 | Msa1082170:intron | 35.0% | |
| GTGTTTGTTTGAATGTGCAT+AGG | + | chr7_2:82152648-82152667 | Msa1082170:intron | 35.0% | |
| TTTGAATGTGCATAGGTAAG+AGG | + | chr7_2:82152655-82152674 | Msa1082170:intron | 35.0% | |
| ! | CTCATCCAAAGGATTTTTGT+GGG | - | chr7_2:82152705-82152724 | None:intergenic | 35.0% |
| ! | TCTCATCCAAAGGATTTTTG+TGG | - | chr7_2:82152706-82152725 | None:intergenic | 35.0% |
| TAACCTTCATGTACATGTCA+TGG | - | chr7_2:82152797-82152816 | None:intergenic | 35.0% | |
| TGACATGTACATGAAGGTTA+AGG | + | chr7_2:82152797-82152816 | Msa1082170:CDS | 35.0% | |
| GACATGTACATGAAGGTTAA+GGG | + | chr7_2:82152798-82152817 | Msa1082170:CDS | 35.0% | |
| ! | TTGTAAAATGTTTAGGGTCC+TGG | + | chr7_2:82153093-82153112 | Msa1082170:intron | 35.0% |
| ATTATAATACTCACTGGGTC+TGG | - | chr7_2:82153176-82153195 | None:intergenic | 35.0% | |
| ACCGCAAAAGAAATCAAAGA+AGG | + | chr7_2:82153269-82153288 | Msa1082170:CDS | 35.0% | |
| !! | GCCTTCTTTGATTTCTTTTG+CGG | - | chr7_2:82153273-82153292 | None:intergenic | 35.0% |
| !! | GTTTTGACGAGTCTTTTTGT+TGG | + | chr7_2:82153358-82153377 | Msa1082170:three_prime_UTR | 35.0% |
| ! | GCAAAACACCATTTAGAACA+GGG | - | chr7_2:82153436-82153455 | None:intergenic | 35.0% |
| ! | AGCAAAACACCATTTAGAAC+AGG | - | chr7_2:82153437-82153456 | None:intergenic | 35.0% |
| ! | ATTTTGTTGCGGAAACACTT+TGG | + | chr7_2:82153469-82153488 | Msa1082170:three_prime_UTR | 35.0% |
| TGAAGTTAACGAAATCTCCA+TGG | + | chr7_2:82151718-82151737 | Msa1082170:CDS | 35.0% | |
| ! | TCGATTCGTTATTGTGTAGA+TGG | + | chr7_2:82151793-82151812 | Msa1082170:intron | 35.0% |
| ! | TAACCAGCTTCCTTATGTTT+TGG | - | chr7_2:82151848-82151867 | None:intergenic | 35.0% |
| AAACATAAGGAAGCTGGTTA+AGG | + | chr7_2:82151848-82151867 | Msa1082170:CDS | 35.0% | |
| ! | TTAAGGATGGGTTTATCATC+AGG | + | chr7_2:82151865-82151884 | Msa1082170:CDS | 35.0% |
| AATGAAGCTAATCGAGGTTA+GGG | - | chr7_2:82151985-82152004 | None:intergenic | 35.0% | |
| AAATGAAGCTAATCGAGGTT+AGG | - | chr7_2:82151986-82152005 | None:intergenic | 35.0% | |
| ! | AACTAATCAATCTAAGACGG+TGG | - | chr7_2:82152312-82152331 | None:intergenic | 35.0% |
| TTGTTTGAAAACTATGGCCT+TGG | + | chr7_2:82152441-82152460 | Msa1082170:intron | 35.0% | |
| TTACTGAGTTGCTCATCAAT+TGG | + | chr7_2:82152512-82152531 | Msa1082170:intron | 35.0% | |
| ACGAGTTTACATTTATGGAC+TGG | + | chr7_2:82152571-82152590 | Msa1082170:intron | 35.0% | |
| GTGTTTGTTTGAATGTGCAT+AGG | + | chr7_2:82152648-82152667 | Msa1082170:intron | 35.0% | |
| TTTGAATGTGCATAGGTAAG+AGG | + | chr7_2:82152655-82152674 | Msa1082170:intron | 35.0% | |
| ! | CTCATCCAAAGGATTTTTGT+GGG | - | chr7_2:82152705-82152724 | None:intergenic | 35.0% |
| ! | TCTCATCCAAAGGATTTTTG+TGG | - | chr7_2:82152706-82152725 | None:intergenic | 35.0% |
| TAACCTTCATGTACATGTCA+TGG | - | chr7_2:82152797-82152816 | None:intergenic | 35.0% | |
| TGACATGTACATGAAGGTTA+AGG | + | chr7_2:82152797-82152816 | Msa1082170:CDS | 35.0% | |
| GACATGTACATGAAGGTTAA+GGG | + | chr7_2:82152798-82152817 | Msa1082170:CDS | 35.0% | |
| ! | TTGTAAAATGTTTAGGGTCC+TGG | + | chr7_2:82153093-82153112 | Msa1082170:intron | 35.0% |
| ATTATAATACTCACTGGGTC+TGG | - | chr7_2:82153176-82153195 | None:intergenic | 35.0% | |
| ACCGCAAAAGAAATCAAAGA+AGG | + | chr7_2:82153269-82153288 | Msa1082170:CDS | 35.0% | |
| !! | GCCTTCTTTGATTTCTTTTG+CGG | - | chr7_2:82153273-82153292 | None:intergenic | 35.0% |
| !! | GTTTTGACGAGTCTTTTTGT+TGG | + | chr7_2:82153358-82153377 | Msa1082170:three_prime_UTR | 35.0% |
| ! | GCAAAACACCATTTAGAACA+GGG | - | chr7_2:82153436-82153455 | None:intergenic | 35.0% |
| ! | AGCAAAACACCATTTAGAAC+AGG | - | chr7_2:82153437-82153456 | None:intergenic | 35.0% |
| ! | ATTTTGTTGCGGAAACACTT+TGG | + | chr7_2:82153469-82153488 | Msa1082170:three_prime_UTR | 35.0% |
| CAGAAACAAGCAATCAACCA+TGG | + | chr7_2:82151619-82151638 | Msa1082170:exon | 40.0% | |
| TAGCTTACGAGAATTAGCCA+TGG | - | chr7_2:82151738-82151757 | None:intergenic | 40.0% | |
| ATAAGGAAGCTGGTTAAGGA+TGG | + | chr7_2:82151852-82151871 | Msa1082170:CDS | 40.0% | |
| TAAGGAAGCTGGTTAAGGAT+GGG | + | chr7_2:82151853-82151872 | Msa1082170:CDS | 40.0% | |
| GTAGAATGAAGGAAGCTAAG+AGG | + | chr7_2:82151922-82151941 | Msa1082170:CDS | 40.0% | |
| ATGAAGGAAGCTAAGAGGAA+AGG | + | chr7_2:82151927-82151946 | Msa1082170:CDS | 40.0% | |
| AAAGGAAGACACTCTGGATA+TGG | + | chr7_2:82151945-82151964 | Msa1082170:CDS | 40.0% | |
| ATGAAGCTAATCGAGGTTAG+GGG | - | chr7_2:82151984-82152003 | None:intergenic | 40.0% | |
| ATATCTCTAGATGACCAGAC+AGG | - | chr7_2:82152610-82152629 | None:intergenic | 40.0% | |
| AATGTGCATAGGTAAGAGGA+AGG | + | chr7_2:82152659-82152678 | Msa1082170:intron | 40.0% | |
| ATGTGCATAGGTAAGAGGAA+GGG | + | chr7_2:82152660-82152679 | Msa1082170:intron | 40.0% | |
| GTACCATGACATGTACATGA+AGG | + | chr7_2:82152791-82152810 | Msa1082170:CDS | 40.0% | |
| ! | TAAAATGTTTAGGGTCCTGG+AGG | + | chr7_2:82153096-82153115 | Msa1082170:intron | 40.0% |
| AGATTGCTTGGCTGAATTGT+TGG | + | chr7_2:82153305-82153324 | Msa1082170:exon | 40.0% | |
| GATTGCTTGGCTGAATTGTT+GGG | + | chr7_2:82153306-82153325 | Msa1082170:three_prime_UTR | 40.0% | |
| !! | CTACTTTAGAACAGCAACTG+AGG | - | chr7_2:82153339-82153358 | None:intergenic | 40.0% |
| !! | AATAAATCGAGTTGGGGCTA+TGG | - | chr7_2:82153552-82153571 | None:intergenic | 40.0% |
| CAGAAACAAGCAATCAACCA+TGG | + | chr7_2:82151619-82151638 | Msa1082170:exon | 40.0% | |
| TAGCTTACGAGAATTAGCCA+TGG | - | chr7_2:82151738-82151757 | None:intergenic | 40.0% | |
| ATAAGGAAGCTGGTTAAGGA+TGG | + | chr7_2:82151852-82151871 | Msa1082170:CDS | 40.0% | |
| TAAGGAAGCTGGTTAAGGAT+GGG | + | chr7_2:82151853-82151872 | Msa1082170:CDS | 40.0% | |
| GTAGAATGAAGGAAGCTAAG+AGG | + | chr7_2:82151922-82151941 | Msa1082170:CDS | 40.0% | |
| ATGAAGGAAGCTAAGAGGAA+AGG | + | chr7_2:82151927-82151946 | Msa1082170:CDS | 40.0% | |
| AAAGGAAGACACTCTGGATA+TGG | + | chr7_2:82151945-82151964 | Msa1082170:CDS | 40.0% | |
| ATGAAGCTAATCGAGGTTAG+GGG | - | chr7_2:82151984-82152003 | None:intergenic | 40.0% | |
| ATATCTCTAGATGACCAGAC+AGG | - | chr7_2:82152610-82152629 | None:intergenic | 40.0% | |
| AATGTGCATAGGTAAGAGGA+AGG | + | chr7_2:82152659-82152678 | Msa1082170:intron | 40.0% | |
| ATGTGCATAGGTAAGAGGAA+GGG | + | chr7_2:82152660-82152679 | Msa1082170:intron | 40.0% | |
| GTACCATGACATGTACATGA+AGG | + | chr7_2:82152791-82152810 | Msa1082170:CDS | 40.0% | |
| ! | TAAAATGTTTAGGGTCCTGG+AGG | + | chr7_2:82153096-82153115 | Msa1082170:intron | 40.0% |
| AGATTGCTTGGCTGAATTGT+TGG | + | chr7_2:82153305-82153324 | Msa1082170:exon | 40.0% | |
| GATTGCTTGGCTGAATTGTT+GGG | + | chr7_2:82153306-82153325 | Msa1082170:three_prime_UTR | 40.0% | |
| !! | CTACTTTAGAACAGCAACTG+AGG | - | chr7_2:82153339-82153358 | None:intergenic | 40.0% |
| !! | AATAAATCGAGTTGGGGCTA+TGG | - | chr7_2:82153552-82153571 | None:intergenic | 40.0% |
| TTGCAATTTGAGGGAGACCA+TGG | - | chr7_2:82151639-82151658 | None:intergenic | 45.0% | |
| !! | GAGGCGCTTTTGCAATTTGA+GGG | - | chr7_2:82151648-82151667 | None:intergenic | 45.0% |
| AGGCCAAAACATAAGGAAGC+TGG | + | chr7_2:82151842-82151861 | Msa1082170:intron | 45.0% | |
| AACCTACCAAGATTCACTCC+AGG | + | chr7_2:82151889-82151908 | Msa1082170:CDS | 45.0% | |
| AAGAGGAAAGGAAGACACTC+TGG | + | chr7_2:82151939-82151958 | Msa1082170:CDS | 45.0% | |
| GAAGACACTCTGGATATGGT+TGG | + | chr7_2:82151949-82151968 | Msa1082170:intron | 45.0% | |
| GGCTTCCCACAAAAATCCTT+TGG | + | chr7_2:82152697-82152716 | Msa1082170:CDS | 45.0% | |
| CACGCATTCTTCTCATCCAA+AGG | - | chr7_2:82152716-82152735 | None:intergenic | 45.0% | |
| TGTCAATCTTCTTAGCCTCC+CGG | - | chr7_2:82152764-82152783 | None:intergenic | 45.0% | |
| TCACAAGTCCAAAGCTGAGA+AGG | + | chr7_2:82152860-82152879 | Msa1082170:CDS | 45.0% | |
| !! | ATTGGCTTTGTTGCAGCAAC+AGG | - | chr7_2:82153153-82153172 | None:intergenic | 45.0% |
| AATACTCACTGGGTCTGGAT+TGG | - | chr7_2:82153171-82153190 | None:intergenic | 45.0% | |
| AACAATCATGCATAGCAGGG+CGG | - | chr7_2:82153227-82153246 | None:intergenic | 45.0% | |
| TTGCAATTTGAGGGAGACCA+TGG | - | chr7_2:82151639-82151658 | None:intergenic | 45.0% | |
| !! | GAGGCGCTTTTGCAATTTGA+GGG | - | chr7_2:82151648-82151667 | None:intergenic | 45.0% |
| AGGCCAAAACATAAGGAAGC+TGG | + | chr7_2:82151842-82151861 | Msa1082170:intron | 45.0% | |
| AACCTACCAAGATTCACTCC+AGG | + | chr7_2:82151889-82151908 | Msa1082170:CDS | 45.0% | |
| AAGAGGAAAGGAAGACACTC+TGG | + | chr7_2:82151939-82151958 | Msa1082170:CDS | 45.0% | |
| GAAGACACTCTGGATATGGT+TGG | + | chr7_2:82151949-82151968 | Msa1082170:intron | 45.0% | |
| GGCTTCCCACAAAAATCCTT+TGG | + | chr7_2:82152697-82152716 | Msa1082170:CDS | 45.0% | |
| CACGCATTCTTCTCATCCAA+AGG | - | chr7_2:82152716-82152735 | None:intergenic | 45.0% | |
| TGTCAATCTTCTTAGCCTCC+CGG | - | chr7_2:82152764-82152783 | None:intergenic | 45.0% | |
| TCACAAGTCCAAAGCTGAGA+AGG | + | chr7_2:82152860-82152879 | Msa1082170:CDS | 45.0% | |
| !! | ATTGGCTTTGTTGCAGCAAC+AGG | - | chr7_2:82153153-82153172 | None:intergenic | 45.0% |
| AATACTCACTGGGTCTGGAT+TGG | - | chr7_2:82153171-82153190 | None:intergenic | 45.0% | |
| AACAATCATGCATAGCAGGG+CGG | - | chr7_2:82153227-82153246 | None:intergenic | 45.0% | |
| !!! | AATAAATTTTATTTTAAGAT+CGG | - | chr7_2:82152160-82152179 | None:intergenic | 5.0% |
| !!! | AATAAATTTTATTTTAAGAT+CGG | - | chr7_2:82152160-82152179 | None:intergenic | 5.0% |
| TGTGATGTGAGCAGCAGCTA+AGG | - | chr7_2:82151595-82151614 | None:intergenic | 50.0% | |
| !! | CGAGGCGCTTTTGCAATTTG+AGG | - | chr7_2:82151649-82151668 | None:intergenic | 50.0% |
| GACCTGGAGTGAATCTTGGT+AGG | - | chr7_2:82151894-82151913 | None:intergenic | 50.0% | |
| ACGAGACCTGGAGTGAATCT+TGG | - | chr7_2:82151898-82151917 | None:intergenic | 50.0% | |
| GTCTCGTGCTCGTAGAATGA+AGG | + | chr7_2:82151911-82151930 | Msa1082170:CDS | 50.0% | |
| GCTCATAGCATGTTCCTGTC+TGG | + | chr7_2:82152593-82152612 | Msa1082170:intron | 50.0% | |
| !! | TAAGAGGAAGGGTACCAGAG+AGG | + | chr7_2:82152671-82152690 | Msa1082170:CDS | 50.0% |
| ! | CTCTCTAGCCTTCTCAGCTT+TGG | - | chr7_2:82152871-82152890 | None:intergenic | 50.0% |
| GACCTTGTCTGACCAGTTTG+AGG | + | chr7_2:82152893-82152912 | Msa1082170:CDS | 50.0% | |
| TCCTAGCATGCTTCCTCTCA+CGG | - | chr7_2:82152944-82152963 | None:intergenic | 50.0% | |
| ! | TGAGAGGAAGCATGCTAGGA+GGG | + | chr7_2:82152944-82152963 | Msa1082170:CDS | 50.0% |
| CAAGCAATCTCAGACTGCAG+CGG | - | chr7_2:82153295-82153314 | None:intergenic | 50.0% | |
| TGTGATGTGAGCAGCAGCTA+AGG | - | chr7_2:82151595-82151614 | None:intergenic | 50.0% | |
| !! | CGAGGCGCTTTTGCAATTTG+AGG | - | chr7_2:82151649-82151668 | None:intergenic | 50.0% |
| GACCTGGAGTGAATCTTGGT+AGG | - | chr7_2:82151894-82151913 | None:intergenic | 50.0% | |
| ACGAGACCTGGAGTGAATCT+TGG | - | chr7_2:82151898-82151917 | None:intergenic | 50.0% | |
| GTCTCGTGCTCGTAGAATGA+AGG | + | chr7_2:82151911-82151930 | Msa1082170:CDS | 50.0% | |
| GCTCATAGCATGTTCCTGTC+TGG | + | chr7_2:82152593-82152612 | Msa1082170:intron | 50.0% | |
| !! | TAAGAGGAAGGGTACCAGAG+AGG | + | chr7_2:82152671-82152690 | Msa1082170:CDS | 50.0% |
| ! | CTCTCTAGCCTTCTCAGCTT+TGG | - | chr7_2:82152871-82152890 | None:intergenic | 50.0% |
| GACCTTGTCTGACCAGTTTG+AGG | + | chr7_2:82152893-82152912 | Msa1082170:CDS | 50.0% | |
| TCCTAGCATGCTTCCTCTCA+CGG | - | chr7_2:82152944-82152963 | None:intergenic | 50.0% | |
| ! | TGAGAGGAAGCATGCTAGGA+GGG | + | chr7_2:82152944-82152963 | Msa1082170:CDS | 50.0% |
| CAAGCAATCTCAGACTGCAG+CGG | - | chr7_2:82153295-82153314 | None:intergenic | 50.0% | |
| ACTTGAGAACGCTGGAAGCG+AGG | - | chr7_2:82151667-82151686 | None:intergenic | 55.0% | |
| GCTTCCAGCGTTCTCAAGTG+CGG | + | chr7_2:82151668-82151687 | Msa1082170:CDS | 55.0% | |
| AGTGCGGTCGTGGCAAAGTT+TGG | + | chr7_2:82151684-82151703 | Msa1082170:CDS | 55.0% | |
| CATTCTACGAGCACGAGACC+TGG | - | chr7_2:82151910-82151929 | None:intergenic | 55.0% | |
| GACGTTTGCTCCGCAAGTAC+CGG | + | chr7_2:82152742-82152761 | Msa1082170:CDS | 55.0% | |
| ACGTTTGCTCCGCAAGTACC+GGG | + | chr7_2:82152743-82152762 | Msa1082170:CDS | 55.0% | |
| TCTTAGCCTCCCGGTACTTG+CGG | - | chr7_2:82152755-82152774 | None:intergenic | 55.0% | |
| GGCCTCAAACTGGTCAGACA+AGG | - | chr7_2:82152898-82152917 | None:intergenic | 55.0% | |
| TGGCACGTTTGGCCTCAAAC+TGG | - | chr7_2:82152908-82152927 | None:intergenic | 55.0% | |
| GGCCAAACGTGCCAAGAACA+AGG | + | chr7_2:82152914-82152933 | Msa1082170:CDS | 55.0% | |
| !! | GGCCTTGTTCTTGGCACGTT+TGG | - | chr7_2:82152919-82152938 | None:intergenic | 55.0% |
| ! | GTGAGAGGAAGCATGCTAGG+AGG | + | chr7_2:82152943-82152962 | Msa1082170:CDS | 55.0% |
| ATCATGCATAGCAGGGCGGA+AGG | - | chr7_2:82153223-82153242 | None:intergenic | 55.0% | |
| ! | CGCTGCAGTCTGAGATTGCT+TGG | + | chr7_2:82153293-82153312 | Msa1082170:exon | 55.0% |
| ACTTGAGAACGCTGGAAGCG+AGG | - | chr7_2:82151667-82151686 | None:intergenic | 55.0% | |
| GCTTCCAGCGTTCTCAAGTG+CGG | + | chr7_2:82151668-82151687 | Msa1082170:CDS | 55.0% | |
| AGTGCGGTCGTGGCAAAGTT+TGG | + | chr7_2:82151684-82151703 | Msa1082170:CDS | 55.0% | |
| CATTCTACGAGCACGAGACC+TGG | - | chr7_2:82151910-82151929 | None:intergenic | 55.0% | |
| GACGTTTGCTCCGCAAGTAC+CGG | + | chr7_2:82152742-82152761 | Msa1082170:CDS | 55.0% | |
| ACGTTTGCTCCGCAAGTACC+GGG | + | chr7_2:82152743-82152762 | Msa1082170:CDS | 55.0% | |
| TCTTAGCCTCCCGGTACTTG+CGG | - | chr7_2:82152755-82152774 | None:intergenic | 55.0% | |
| GGCCTCAAACTGGTCAGACA+AGG | - | chr7_2:82152898-82152917 | None:intergenic | 55.0% | |
| TGGCACGTTTGGCCTCAAAC+TGG | - | chr7_2:82152908-82152927 | None:intergenic | 55.0% | |
| GGCCAAACGTGCCAAGAACA+AGG | + | chr7_2:82152914-82152933 | Msa1082170:CDS | 55.0% | |
| !! | GGCCTTGTTCTTGGCACGTT+TGG | - | chr7_2:82152919-82152938 | None:intergenic | 55.0% |
| ! | GTGAGAGGAAGCATGCTAGG+AGG | + | chr7_2:82152943-82152962 | Msa1082170:CDS | 55.0% |
| ATCATGCATAGCAGGGCGGA+AGG | - | chr7_2:82153223-82153242 | None:intergenic | 55.0% | |
| ! | CGCTGCAGTCTGAGATTGCT+TGG | + | chr7_2:82153293-82153312 | Msa1082170:exon | 55.0% |
| ACGACCGCACTTGAGAACGC+TGG | - | chr7_2:82151675-82151694 | None:intergenic | 60.0% | |
| AGCGTTCTCAAGTGCGGTCG+TGG | + | chr7_2:82151674-82151693 | Msa1082170:CDS | 60.0% | |
| !! | GGAAGGGTACCAGAGAGGCA+AGG | + | chr7_2:82152676-82152695 | Msa1082170:CDS | 60.0% |
| TGTGGGAAGCCTTGCCTCTC+TGG | - | chr7_2:82152688-82152707 | None:intergenic | 60.0% | |
| !! | TTTGCTCCGCAAGTACCGGG+AGG | + | chr7_2:82152746-82152765 | Msa1082170:CDS | 60.0% |
| !! | CTCACGGCTGGCCTTGTTCT+TGG | - | chr7_2:82152928-82152947 | None:intergenic | 60.0% |
| AGAACAAGGCCAGCCGTGAG+AGG | + | chr7_2:82152928-82152947 | Msa1082170:CDS | 60.0% | |
| AGCATGCTTCCTCTCACGGC+TGG | - | chr7_2:82152940-82152959 | None:intergenic | 60.0% | |
| ! | GCCGTGAGAGGAAGCATGCT+AGG | + | chr7_2:82152940-82152959 | Msa1082170:CDS | 60.0% |
| ! | GAGGAAGCATGCTAGGAGGG+AGG | + | chr7_2:82152947-82152966 | Msa1082170:CDS | 60.0% |
| !! | TCTGCTGGCTTCTCTCCTCC+AGG | - | chr7_2:82153114-82153133 | None:intergenic | 60.0% |
| GCAGCACTAGGAGCTTCTGC+TGG | - | chr7_2:82153129-82153148 | None:intergenic | 60.0% | |
| GCAGCAACAGGTGCAGCACT+AGG | - | chr7_2:82153141-82153160 | None:intergenic | 60.0% | |
| ACGACCGCACTTGAGAACGC+TGG | - | chr7_2:82151675-82151694 | None:intergenic | 60.0% | |
| AGCGTTCTCAAGTGCGGTCG+TGG | + | chr7_2:82151674-82151693 | Msa1082170:CDS | 60.0% | |
| !! | GGAAGGGTACCAGAGAGGCA+AGG | + | chr7_2:82152676-82152695 | Msa1082170:CDS | 60.0% |
| TGTGGGAAGCCTTGCCTCTC+TGG | - | chr7_2:82152688-82152707 | None:intergenic | 60.0% | |
| !! | TTTGCTCCGCAAGTACCGGG+AGG | + | chr7_2:82152746-82152765 | Msa1082170:CDS | 60.0% |
| !! | CTCACGGCTGGCCTTGTTCT+TGG | - | chr7_2:82152928-82152947 | None:intergenic | 60.0% |
| AGAACAAGGCCAGCCGTGAG+AGG | + | chr7_2:82152928-82152947 | Msa1082170:CDS | 60.0% | |
| AGCATGCTTCCTCTCACGGC+TGG | - | chr7_2:82152940-82152959 | None:intergenic | 60.0% | |
| ! | GCCGTGAGAGGAAGCATGCT+AGG | + | chr7_2:82152940-82152959 | Msa1082170:CDS | 60.0% |
| ! | GAGGAAGCATGCTAGGAGGG+AGG | + | chr7_2:82152947-82152966 | Msa1082170:CDS | 60.0% |
| !! | TCTGCTGGCTTCTCTCCTCC+AGG | - | chr7_2:82153114-82153133 | None:intergenic | 60.0% |
| GCAGCACTAGGAGCTTCTGC+TGG | - | chr7_2:82153129-82153148 | None:intergenic | 60.0% | |
| GCAGCAACAGGTGCAGCACT+AGG | - | chr7_2:82153141-82153160 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 82151587 | 82153578 | 82151587 | ID=Msa1082170;Name=Msa1082170 |
| chr7_2 | mRNA | 82151587 | 82153578 | 82151587 | ID=Msa1082170-mRNA-1;Parent=Msa1082170;Name=Msa1082170-mRNA-1;_AED=0.00;_eAED=0.00;_QI=51|1|1|1|1|1|5|273|219 |
| chr7_2 | exon | 82151587 | 82151749 | 82151587 | ID=Msa1082170-mRNA-1:exon:21151;Parent=Msa1082170-mRNA-1 |
| chr7_2 | exon | 82151844 | 82151966 | 82151844 | ID=Msa1082170-mRNA-1:exon:21152;Parent=Msa1082170-mRNA-1 |
| chr7_2 | exon | 82152670 | 82152983 | 82152670 | ID=Msa1082170-mRNA-1:exon:21153;Parent=Msa1082170-mRNA-1 |
| chr7_2 | exon | 82153108 | 82153181 | 82153108 | ID=Msa1082170-mRNA-1:exon:21154;Parent=Msa1082170-mRNA-1 |
| chr7_2 | exon | 82153269 | 82153578 | 82153269 | ID=Msa1082170-mRNA-1:exon:21155;Parent=Msa1082170-mRNA-1 |
| chr7_2 | five_prime_UTR | 82151587 | 82151637 | 82151587 | ID=Msa1082170-mRNA-1:five_prime_utr;Parent=Msa1082170-mRNA-1 |
| chr7_2 | CDS | 82151638 | 82151749 | 82151638 | ID=Msa1082170-mRNA-1:cds;Parent=Msa1082170-mRNA-1 |
| chr7_2 | CDS | 82151844 | 82151966 | 82151844 | ID=Msa1082170-mRNA-1:cds;Parent=Msa1082170-mRNA-1 |
| chr7_2 | CDS | 82152670 | 82152983 | 82152670 | ID=Msa1082170-mRNA-1:cds;Parent=Msa1082170-mRNA-1 |
| chr7_2 | CDS | 82153108 | 82153181 | 82153108 | ID=Msa1082170-mRNA-1:cds;Parent=Msa1082170-mRNA-1 |
| chr7_2 | CDS | 82153269 | 82153305 | 82153269 | ID=Msa1082170-mRNA-1:cds;Parent=Msa1082170-mRNA-1 |
| chr7_2 | three_prime_UTR | 82153306 | 82153578 | 82153306 | ID=Msa1082170-mRNA-1:three_prime_utr;Parent=Msa1082170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
