Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0661050 | XP_013456167.1 | 91.777 | 377 | 27 | 2 | 1 | 373 | 1 | 377 | 0.0 | 711 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0661050 | A0A072UM83 | 91.777 | 377 | 27 | 2 | 1 | 373 | 1 | 377 | 0.0 | 711 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0661050 | Msa0684390 | 0.893179 | 7.995882e-75 | -8.615850e-47 |
| Msa0661050 | Msa1051410 | -0.803244 | 3.824616e-49 | -8.615850e-47 |
| Msa0661050 | Msa1208840 | 0.805702 | 1.174857e-49 | -8.615850e-47 |
| Msa0450880 | Msa0661050 | -0.811985 | 5.322772e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0661050 | MtrunA17_Chr4g0032271 | 91.777 | 377 | 27 | 2 | 1 | 373 | 1 | 377 | 0.0 | 711 |
| Msa0661050 | MtrunA17_Chr2g0328681 | 39.925 | 268 | 133 | 8 | 114 | 373 | 74 | 321 | 1.05e-40 | 146 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0661050 | AT5G59050.1 | 29.969 | 327 | 143 | 13 | 70 | 373 | 49 | 312 | 2.78e-11 | 64.3 |
Find 129 sgRNAs with CRISPR-Local
Find 493 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTGATTTCTCCTGATTT+TGG | 0.113905 | 4_3:-72267867 | Msa0661050:CDS |
| TTACTTTATTCTGCTTTAAT+TGG | 0.215865 | 4_3:+72263928 | None:intergenic |
| AAAGAAGATGATGTTAGATT+TGG | 0.267375 | 4_3:-72267010 | Msa0661050:CDS |
| CAAATTGATTGCAGATGTTT+TGG | 0.292136 | 4_3:-72264150 | Msa0661050:intron |
| GGAGAAGCAGACAGATTTCC+AGG | 0.297287 | 4_3:-72266939 | Msa0661050:CDS |
| TTATGTGTAGGGAAATCTTT+TGG | 0.299941 | 4_3:-72263856 | Msa0661050:three_prime_UTR |
| GTCACCTTTATGCTCAAATC+AGG | 0.304589 | 4_3:-72267552 | Msa0661050:CDS |
| ATGAATGGCAATGATGAAAT+AGG | 0.319848 | 4_3:+72268033 | None:intergenic |
| GCTGGTCTCAATCATCTCTT+TGG | 0.335355 | 4_3:-72267574 | Msa0661050:CDS |
| GACCAAATTGCTGCCACCTC+TGG | 0.353892 | 4_3:-72265536 | Msa0661050:CDS |
| TCTCCATCTCCGAGCTTTGA+TGG | 0.360510 | 4_3:+72267402 | None:intergenic |
| TGCACAAATTCGAGCTAATC+AGG | 0.362632 | 4_3:-72267327 | Msa0661050:intron |
| ACCGTTGATGTTGAATTTGT+TGG | 0.370695 | 4_3:+72267908 | None:intergenic |
| AAGAAGATGATGTTAGATTT+GGG | 0.373779 | 4_3:-72267009 | Msa0661050:CDS |
| TACCATTCTTCTGCACTTGT+GGG | 0.375233 | 4_3:+72267032 | None:intergenic |
| CAATGGACTCAATGAGTTGC+TGG | 0.375624 | 4_3:-72267592 | Msa0661050:CDS |
| CCATTCATTCTTAATTATCA+TGG | 0.375653 | 4_3:-72268018 | Msa0661050:exon |
| CCAGGCTCAGATGGTTCCTT+AGG | 0.377742 | 4_3:+72267506 | None:intergenic |
| TCAGAATCATAGCTGTTTCC+AGG | 0.384732 | 4_3:+72267488 | None:intergenic |
| TGCTTCACTTCTGCTTCAAT+AGG | 0.405009 | 4_3:+72264028 | None:intergenic |
| GGCAATGATGAAATAGGTTA+AGG | 0.410498 | 4_3:+72268039 | None:intergenic |
| TCTGCACTTGTGGGGACAAA+TGG | 0.411911 | 4_3:+72267041 | None:intergenic |
| ACTTCTCAATCCCATGTTGC+TGG | 0.413320 | 4_3:-72267380 | Msa0661050:CDS |
| GAGTGAGTTAAGTCCGTTGA+TGG | 0.417707 | 4_3:+72267930 | None:intergenic |
| TTTGTGCATTAAGTAGGTAT+TGG | 0.418421 | 4_3:+72267342 | None:intergenic |
| TTACCATTCTTCTGCACTTG+TGG | 0.427837 | 4_3:+72267031 | None:intergenic |
| ACAGATTTCCAGGGAGCAAC+CGG | 0.428575 | 4_3:-72266929 | Msa0661050:CDS |
| GTCCAGAGGTGGCAGCAATT+TGG | 0.430248 | 4_3:+72265534 | None:intergenic |
| TATGTATGAGATCCAAAATC+AGG | 0.430550 | 4_3:+72267855 | None:intergenic |
| GGAGGGAAGACACGAGGCTT+AGG | 0.436010 | 4_3:+72265512 | None:intergenic |
| CCCGATTGGATTTATGTGTA+GGG | 0.436599 | 4_3:-72263867 | Msa0661050:three_prime_UTR |
| CTCCCCTGATTTGAGCATAA+AGG | 0.438351 | 4_3:+72267548 | None:intergenic |
| TATGCACCAGCAGGCAGGTT+CGG | 0.449566 | 4_3:-72266960 | Msa0661050:CDS |
| TCCCTACACATAAATCCAAT+CGG | 0.456604 | 4_3:+72263866 | None:intergenic |
| TCCTCCCAACGATTGCGAAT+CGG | 0.457377 | 4_3:-72267718 | Msa0661050:intron |
| GCTTCTCCGAACCTGCCTGC+TGG | 0.466137 | 4_3:+72266954 | None:intergenic |
| TGAAGGCTCTTTGTCTCCTA+AGG | 0.467780 | 4_3:-72267522 | Msa0661050:CDS |
| ATGGCACCTTTGCAACGGCC+TGG | 0.468622 | 4_3:-72266986 | Msa0661050:CDS |
| CTCGAATTTGTGCATTAAGT+AGG | 0.469668 | 4_3:+72267336 | None:intergenic |
| CTCTTGAACCGGTTGCTCCC+TGG | 0.471523 | 4_3:+72266921 | None:intergenic |
| ACATGATGTGCCTCTTGAAC+CGG | 0.474939 | 4_3:+72266910 | None:intergenic |
| GAACCATATGCATATGTTGT+TGG | 0.476980 | 4_3:+72267757 | None:intergenic |
| TGTTCTGTATGATCCATCCT+TGG | 0.484104 | 4_3:+72259046 | None:intergenic |
| CCATGATAATTAAGAATGAA+TGG | 0.486450 | 4_3:+72268018 | None:intergenic |
| CAAAGCTTGTACTACTCTCT+CGG | 0.486527 | 4_3:+72265571 | None:intergenic |
| GGTCCTATGCACCAGCAGGC+AGG | 0.498891 | 4_3:-72266965 | Msa0661050:CDS |
| CGTGTCTTCCCTCCCCTGCA+TGG | 0.504131 | 4_3:-72265503 | Msa0661050:intron |
| CAGCAACTCATTGAGTCCAT+TGG | 0.507072 | 4_3:+72267593 | None:intergenic |
| TACCCAACAACATATGCATA+TGG | 0.507804 | 4_3:-72267760 | Msa0661050:CDS |
| ATAAATAAAATATTCCCGAT+TGG | 0.508263 | 4_3:-72263881 | Msa0661050:three_prime_UTR |
| AGATCGTCTTCTTTCTCTTG+CGG | 0.509918 | 4_3:+72267795 | None:intergenic |
| ATGATGAAATAGGTTAAGGT+AGG | 0.510383 | 4_3:+72268043 | None:intergenic |
| GCCTGCTGGTGCATAGGACC+AGG | 0.510548 | 4_3:+72266968 | None:intergenic |
| ATAAAGTAATAAAGAAAAGC+TGG | 0.512651 | 4_3:-72263914 | Msa0661050:three_prime_UTR |
| ACCATTCTTCTGCACTTGTG+GGG | 0.512805 | 4_3:+72267033 | None:intergenic |
| GAACCTGCCTGCTGGTGCAT+AGG | 0.513798 | 4_3:+72266962 | None:intergenic |
| ACAAACCGATTCGCAATCGT+TGG | 0.515659 | 4_3:+72267713 | None:intergenic |
| TTGCGGCTGATGTGCCTCGA+TGG | 0.516118 | 4_3:+72267812 | None:intergenic |
| ATACCATCAAAGCTCGGAGA+TGG | 0.518569 | 4_3:-72267405 | Msa0661050:CDS |
| TATTAGTACTTTGATGATGA+GGG | 0.518927 | 4_3:+72268082 | None:intergenic |
| GCCTGGTCCTATGCACCAGC+AGG | 0.522734 | 4_3:-72266969 | Msa0661050:CDS |
| CCCTACACATAAATCCAATC+GGG | 0.522812 | 4_3:+72263867 | None:intergenic |
| CCTAAGGAACCATCTGAGCC+TGG | 0.524665 | 4_3:-72267506 | Msa0661050:CDS |
| TCCCCACAAGTGCAGAAGAA+TGG | 0.526664 | 4_3:-72267034 | Msa0661050:CDS |
| TTCGTTACTCCCGCCATCAA+CGG | 0.526959 | 4_3:-72267943 | Msa0661050:CDS |
| CCGTGATTGACGCTTCTGTA+GGG | 0.527468 | 4_3:+72264100 | None:intergenic |
| TCCGTGATTGACGCTTCTGT+AGG | 0.530189 | 4_3:+72264099 | None:intergenic |
| AACCATATGCATATGTTGTT+GGG | 0.531929 | 4_3:+72267758 | None:intergenic |
| TCCCGATTGGATTTATGTGT+AGG | 0.533535 | 4_3:-72263868 | Msa0661050:three_prime_UTR |
| GAGTTAAGTCCGTTGATGGC+GGG | 0.534465 | 4_3:+72267934 | None:intergenic |
| TAAAGAAAAGCTGGTTGAAG+AGG | 0.538106 | 4_3:-72263905 | Msa0661050:three_prime_UTR |
| CAAACCGATTCGCAATCGTT+GGG | 0.542640 | 4_3:+72267714 | None:intergenic |
| AGAGGCACATCATGTGGGAC+AGG | 0.544872 | 4_3:-72266902 | Msa0661050:CDS |
| ACTATAAGAAGGTACCATGC+AGG | 0.546536 | 4_3:+72265489 | None:intergenic |
| TGATGAAATAGGTTAAGGTA+GGG | 0.547627 | 4_3:+72268044 | None:intergenic |
| CTTCTATCAGTTGAAGCCAA+TGG | 0.547789 | 4_3:-72267609 | Msa0661050:intron |
| TCAAATCAGGGGAGTTCTGA+AGG | 0.549302 | 4_3:-72267539 | Msa0661050:CDS |
| GTTGACCTACACACTGGTAA+TGG | 0.553735 | 4_3:-72267993 | Msa0661050:CDS |
| TCACCTTTATGCTCAAATCA+GGG | 0.553865 | 4_3:-72267551 | Msa0661050:CDS |
| GGCGGGAGTAACGAATCATA+AGG | 0.556543 | 4_3:+72267951 | None:intergenic |
| AGATGATTCTGCCTCGAGAG+TGG | 0.556795 | 4_3:-72264052 | Msa0661050:CDS |
| TACACACTGGTAATGGCAGT+GGG | 0.559048 | 4_3:-72267986 | Msa0661050:CDS |
| GTATTAGTACTTTGATGATG+AGG | 0.560500 | 4_3:+72268081 | None:intergenic |
| AGAAGGTACCATGCAGGGGA+GGG | 0.560754 | 4_3:+72265495 | None:intergenic |
| CTATAAGAAGGTACCATGCA+GGG | 0.563928 | 4_3:+72265490 | None:intergenic |
| TTGGGATGGCACCTTTGCAA+CGG | 0.566146 | 4_3:-72266991 | Msa0661050:CDS |
| AAAGCTTGTACTACTCTCTC+GGG | 0.568645 | 4_3:+72265572 | None:intergenic |
| TGTAAGAGGCGATCCAAGGA+TGG | 0.571449 | 4_3:-72259059 | Msa0661050:three_prime_UTR |
| ATGAAATAGGTTAAGGTAGG+GGG | 0.573727 | 4_3:+72268046 | None:intergenic |
| CAGGGAGCAACCGGTTCAAG+AGG | 0.574297 | 4_3:-72266920 | Msa0661050:CDS |
| GGTTCAAGAGGCACATCATG+TGG | 0.575438 | 4_3:-72266908 | Msa0661050:CDS |
| AGATGATGTTAGATTTGGGA+TGG | 0.578501 | 4_3:-72267005 | Msa0661050:CDS |
| ATAGGACCAGGCCGTTGCAA+AGG | 0.579992 | 4_3:+72266980 | None:intergenic |
| TTCTAAATACCATCAAAGCT+CGG | 0.580519 | 4_3:-72267411 | Msa0661050:CDS |
| TTTGTGTAAGAGGCGATCCA+AGG | 0.581203 | 4_3:-72259063 | Msa0661050:three_prime_UTR |
| GATTCATGTTAGTACTTGTG+TGG | 0.585113 | 4_3:-72263957 | Msa0661050:three_prime_UTR |
| AAGAAGGTACCATGCAGGGG+AGG | 0.586164 | 4_3:+72265494 | None:intergenic |
| GATGAAATAGGTTAAGGTAG+GGG | 0.590432 | 4_3:+72268045 | None:intergenic |
| ACCGATTCGCAATCGTTGGG+AGG | 0.590639 | 4_3:+72267717 | None:intergenic |
| TTGGTGAGTACTAATAGGGA+TGG | 0.591514 | 4_3:-72264131 | Msa0661050:CDS |
| TAGCTGTTTCCAGGCTCAGA+TGG | 0.592467 | 4_3:+72267497 | None:intergenic |
| TGGCAGCAATTTGGTCAAAG+TGG | 0.593547 | 4_3:+72265543 | None:intergenic |
| CTACACACTGGTAATGGCAG+TGG | 0.593741 | 4_3:-72267987 | Msa0661050:CDS |
| ATGAACAAACTCCAGCAACA+TGG | 0.595864 | 4_3:+72267369 | None:intergenic |
| GCCTCGATGGAATGAGGAGG+TGG | 0.596281 | 4_3:+72267825 | None:intergenic |
| TCCAACAAATTCAACATCAA+CGG | 0.598058 | 4_3:-72267909 | Msa0661050:CDS |
| TGAACAAACTCCAGCAACAT+GGG | 0.604199 | 4_3:+72267370 | None:intergenic |
| GACACGAGGCTTAGGTCCAG+AGG | 0.606175 | 4_3:+72265520 | None:intergenic |
| CTTCAATAGGTCCACTCTCG+AGG | 0.607048 | 4_3:+72264041 | None:intergenic |
| CCCTACAGAAGCGTCAATCA+CGG | 0.609485 | 4_3:-72264100 | Msa0661050:CDS |
| TGATGTGCCTCGATGGAATG+AGG | 0.610929 | 4_3:+72267819 | None:intergenic |
| TGAGTTAAGTCCGTTGATGG+CGG | 0.619558 | 4_3:+72267933 | None:intergenic |
| GTTGGGAGGAATGTCTAGCA+TGG | 0.626414 | 4_3:+72267731 | None:intergenic |
| CACCTTTATGCTCAAATCAG+GGG | 0.629363 | 4_3:-72267550 | Msa0661050:CDS |
| GAGAAGCAGACAGATTTCCA+GGG | 0.632232 | 4_3:-72266938 | Msa0661050:CDS |
| TGCAGGGGAGGGAAGACACG+AGG | 0.638385 | 4_3:+72265506 | None:intergenic |
| GTATATAGATGTCTAGACAA+AGG | 0.648851 | 4_3:-72267120 | Msa0661050:intron |
| ACGAGGCTTAGGTCCAGAGG+TGG | 0.659130 | 4_3:+72265523 | None:intergenic |
| CACTGCCATTACCAGTGTGT+AGG | 0.659864 | 4_3:+72267988 | None:intergenic |
| ATGGCTGTTGACCTACACAC+TGG | 0.672281 | 4_3:-72267999 | Msa0661050:CDS |
| GTTCAAGAGGCACATCATGT+GGG | 0.674495 | 4_3:-72266907 | Msa0661050:CDS |
| GCAGCTTATAGAGAAAGTCA+TGG | 0.677661 | 4_3:-72267064 | Msa0661050:CDS |
| TATAAGAAGGTACCATGCAG+GGG | 0.678814 | 4_3:+72265491 | None:intergenic |
| TCACATCAGACTAAGAGACC+TGG | 0.684527 | 4_3:-72266842 | Msa0661050:intron |
| TCTCTCGGGTATAAGAACAG+TGG | 0.720927 | 4_3:+72265586 | None:intergenic |
| ACACACTGGTAATGGCAGTG+GGG | 0.731212 | 4_3:-72267985 | Msa0661050:CDS |
| TCCACCTCCTCATTCCATCG+AGG | 0.740167 | 4_3:-72267826 | Msa0661050:CDS |
| AAAGCACTGACTCCACCACG+TGG | 0.741477 | 4_3:+72266869 | None:intergenic |
| TGTGCCTCGATGGAATGAGG+AGG | 0.744070 | 4_3:+72267822 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACATATAACATTTTAAATTT+TGG | + | chr4_3:72260667-72260686 | None:intergenic | 10.0% |
| !!! | TTTACTTAAATTTAAGATTT+TGG | - | chr4_3:72261074-72261093 | Msa0661050:intron | 10.0% |
| !! | TTGTTAGTAATTATATTATA+TGG | + | chr4_3:72262062-72262081 | None:intergenic | 10.0% |
| !! | AAAATTGTATCAATTAAATT+GGG | + | chr4_3:72262451-72262470 | None:intergenic | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | - | chr4_3:72262486-72262505 | Msa0661050:intron | 10.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | - | chr4_3:72262487-72262506 | Msa0661050:intron | 10.0% |
| !! | ATGACATTAATTAATAAATA+AGG | - | chr4_3:72263386-72263405 | Msa0661050:intron | 10.0% |
| !!! | TTTTCTTATACTTTTTTATA+TGG | + | chr4_3:72263784-72263803 | None:intergenic | 10.0% |
| !! | ACATATATATATATATAGTT+CGG | - | chr4_3:72263932-72263951 | Msa0661050:three_prime_UTR | 10.0% |
| !! | AAAAACAAAAAAAAAACATA+TGG | - | chr4_3:72266307-72266326 | Msa0661050:intron | 10.0% |
| !! | AAAACAAAAAAAAAACATAT+GGG | - | chr4_3:72266308-72266327 | Msa0661050:intron | 10.0% |
| !!! | AGATATATCTTATTTATAAA+AGG | + | chr4_3:72268013-72268032 | None:intergenic | 10.0% |
| !! | ATTAATTACAATCATATGAT+CGG | + | chr4_3:72259975-72259994 | None:intergenic | 15.0% |
| !!! | AAATTAAAGGATTAATTTGT+TGG | - | chr4_3:72260830-72260849 | Msa0661050:intron | 15.0% |
| !!! | AAATTTTAACTTTAGTTCTA+CGG | + | chr4_3:72260944-72260963 | None:intergenic | 15.0% |
| !! | AAAATTAGTTGAACATAAAA+TGG | + | chr4_3:72261003-72261022 | None:intergenic | 15.0% |
| !! | CTTAAATTTAAGTAAATGTT+TGG | + | chr4_3:72261070-72261089 | None:intergenic | 15.0% |
| !! | TCTTTAATAAATATTCACTT+TGG | - | chr4_3:72261662-72261681 | Msa0661050:intron | 15.0% |
| !! | TAAAACTAGATCATTTAAAA+CGG | + | chr4_3:72261723-72261742 | None:intergenic | 15.0% |
| !! | TATGTATTAATAGAAAAATG+AGG | + | chr4_3:72261777-72261796 | None:intergenic | 15.0% |
| !!! | CACTGTTTATATATATATTT+TGG | - | chr4_3:72262252-72262271 | Msa0661050:intron | 15.0% |
| !! | ATTTATTTCACTAAAAACTA+AGG | - | chr4_3:72262395-72262414 | Msa0661050:intron | 15.0% |
| !! | CAAAATTGTATCAATTAAAT+TGG | + | chr4_3:72262452-72262471 | None:intergenic | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | - | chr4_3:72262488-72262507 | Msa0661050:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | chr4_3:72262551-72262570 | Msa0661050:intron | 15.0% |
| !! | AGTAATAATATACAAATTTG+TGG | - | chr4_3:72263564-72263583 | Msa0661050:intron | 15.0% |
| !!! | TTTATGATGAATTTTTGATT+TGG | + | chr4_3:72263663-72263682 | None:intergenic | 15.0% |
| !! | ATATTTCTCAATAACATAAT+TGG | - | chr4_3:72264474-72264493 | Msa0661050:intron | 15.0% |
| !!! | TATTTCATTTTTTCAAGATA+GGG | + | chr4_3:72264715-72264734 | None:intergenic | 15.0% |
| !!! | ATATTTCATTTTTTCAAGAT+AGG | + | chr4_3:72264716-72264735 | None:intergenic | 15.0% |
| !! | TATTAACAATTGAAGAAATT+AGG | - | chr4_3:72264769-72264788 | Msa0661050:intron | 15.0% |
| !!! | TGAATTGAAAAATTTAACTT+TGG | + | chr4_3:72265671-72265690 | None:intergenic | 15.0% |
| !! | AAAAAAACAAACTAAGATTA+TGG | - | chr4_3:72266037-72266056 | Msa0661050:intron | 15.0% |
| !! | AAACAAAAAAAAAACATATG+GGG | - | chr4_3:72266309-72266328 | Msa0661050:intron | 15.0% |
| !!! | TTCTATTTTCTCTATTTTTT+TGG | + | chr4_3:72266377-72266396 | None:intergenic | 15.0% |
| !!! | TAATCTTAGTTTGTTTTTTT+TGG | + | chr4_3:72266037-72266056 | None:intergenic | 15.0% |
| !! | AAAAAAACAAACTAAGATTA+TGG | - | chr4_3:72266037-72266056 | Msa0661050:intron | 15.0% |
| !! | AAAAAAACAAACTAAGATTA+TGG | - | chr4_3:72266037-72266056 | Msa0661050:intron | 15.0% |
| !! | AACAAAAACAAAAAAACATA+TGG | - | chr4_3:72266736-72266755 | Msa0661050:intron | 15.0% |
| !! | ACAAAAACAAAAAAACATAT+GGG | - | chr4_3:72266737-72266756 | Msa0661050:intron | 15.0% |
| !!! | TTCTATTTTCTCTATTTTTT+TGG | + | chr4_3:72266377-72266396 | None:intergenic | 15.0% |
| !!! | TTATTTTGTTTTTTGTTTGA+TGG | + | chr4_3:72266844-72266863 | None:intergenic | 15.0% |
| !!! | TAATCTTAGTTTGTTTTTTT+TGG | + | chr4_3:72266037-72266056 | None:intergenic | 15.0% |
| !! | AAAAAAACAAACTAAGATTA+TGG | - | chr4_3:72266037-72266056 | Msa0661050:intron | 15.0% |
| !! | AAAAAAACAAACTAAGATTA+TGG | - | chr4_3:72266037-72266056 | Msa0661050:intron | 15.0% |
| !! | AACAAAAACAAAAAAACATA+TGG | - | chr4_3:72266736-72266755 | Msa0661050:intron | 15.0% |
| !! | ACAAAAACAAAAAAACATAT+GGG | - | chr4_3:72266737-72266756 | Msa0661050:intron | 15.0% |
| !!! | TTCTATTTTCTCTATTTTTT+TGG | + | chr4_3:72266377-72266396 | None:intergenic | 15.0% |
| !!! | TTATTTTGTTTTTTGTTTGA+TGG | + | chr4_3:72266844-72266863 | None:intergenic | 15.0% |
| !!! | TAATCTTAGTTTGTTTTTTT+TGG | + | chr4_3:72266037-72266056 | None:intergenic | 15.0% |
| !! | AAAAAAACAAACTAAGATTA+TGG | - | chr4_3:72266037-72266056 | Msa0661050:intron | 15.0% |
| !! | AAAAAAACAAACTAAGATTA+TGG | - | chr4_3:72266037-72266056 | Msa0661050:intron | 15.0% |
| !! | AACAAAAACAAAAAAACATA+TGG | - | chr4_3:72266736-72266755 | Msa0661050:intron | 15.0% |
| !! | ACAAAAACAAAAAAACATAT+GGG | - | chr4_3:72266737-72266756 | Msa0661050:intron | 15.0% |
| !!! | TTCTATTTTCTCTATTTTTT+TGG | + | chr4_3:72266377-72266396 | None:intergenic | 15.0% |
| !!! | TTATTTTGTTTTTTGTTTGA+TGG | + | chr4_3:72266844-72266863 | None:intergenic | 15.0% |
| !! | AAAAAAACAAACTAAGATTA+TGG | - | chr4_3:72266037-72266056 | Msa0661050:intron | 15.0% |
| !! | TGTGATTTATTGCAATATAA+AGG | - | chr4_3:72260445-72260464 | Msa0661050:intron | 20.0% |
| !!! | TTGCAATTTAAAATCATGAT+TGG | - | chr4_3:72260501-72260520 | Msa0661050:intron | 20.0% |
| !!! | TTTTAGTAATTGAAATTGTG+TGG | - | chr4_3:72260573-72260592 | Msa0661050:intron | 20.0% |
| !! | TGACTTACATTATTCAATTT+AGG | + | chr4_3:72260616-72260635 | None:intergenic | 20.0% |
| !!! | AGATATTTCTATAGTTTTCA+TGG | - | chr4_3:72260730-72260749 | Msa0661050:intron | 20.0% |
| !!! | TTATTAAAGAGACATTTTGA+TGG | - | chr4_3:72260757-72260776 | Msa0661050:intron | 20.0% |
| !!! | TTGCTATTTCTGAAAATTAA+AGG | - | chr4_3:72260817-72260836 | Msa0661050:intron | 20.0% |
| !!! | TAAATTTAAGATTTTGGTGT+TGG | - | chr4_3:72261080-72261099 | Msa0661050:intron | 20.0% |
| !!! | AAATTTAAGATTTTGGTGTT+GGG | - | chr4_3:72261081-72261100 | Msa0661050:intron | 20.0% |
| !!! | ACTTTTCAAAAAAGAAACAA+TGG | + | chr4_3:72261381-72261400 | None:intergenic | 20.0% |
| !!! | TTGTTTCTTTTTTGAAAAGT+AGG | - | chr4_3:72261381-72261400 | Msa0661050:intron | 20.0% |
| !! | TTTAATGTTTACATGTGATT+TGG | - | chr4_3:72261499-72261518 | Msa0661050:intron | 20.0% |
| !! | TTAAAGAAAAGACTATAAGA+AGG | + | chr4_3:72261649-72261668 | None:intergenic | 20.0% |
| !!! | AAAACTAGATCATTTAAAAC+GGG | + | chr4_3:72261722-72261741 | None:intergenic | 20.0% |
| !!! | TGTGCATTTTTTAAAGTTAA+GGG | + | chr4_3:72262124-72262143 | None:intergenic | 20.0% |
| !!! | ATGTGCATTTTTTAAAGTTA+AGG | + | chr4_3:72262125-72262144 | None:intergenic | 20.0% |
| !! | TGGTGAAAAAAAATAATCAT+GGG | + | chr4_3:72262172-72262191 | None:intergenic | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | - | chr4_3:72262511-72262530 | Msa0661050:intron | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+AGG | - | chr4_3:72262585-72262604 | Msa0661050:intron | 20.0% |
| !!! | CAGCAATTATCTTATTTAAA+TGG | - | chr4_3:72262693-72262712 | Msa0661050:intron | 20.0% |
| !! | GAGAAAAAGTAAAAAATGTT+AGG | - | chr4_3:72262844-72262863 | Msa0661050:intron | 20.0% |
| !! | TTACTTTATTCTGCTTTAAT+TGG | + | chr4_3:72263199-72263218 | None:intergenic | 20.0% |
| !! | ATAAAGTAATAAAGAAAAGC+TGG | - | chr4_3:72263210-72263229 | Msa0661050:intron | 20.0% |
| !! | ATAAATAAAATATTCCCGAT+TGG | - | chr4_3:72263243-72263262 | Msa0661050:intron | 20.0% |
| !! | AGATTAGATAGCAAAAATTA+TGG | - | chr4_3:72263312-72263331 | Msa0661050:intron | 20.0% |
| !!! | TAAATTATTCAGGGTTTTAT+TGG | + | chr4_3:72263473-72263492 | None:intergenic | 20.0% |
| !! | TGAGAATTCTAAATTATTCA+GGG | + | chr4_3:72263482-72263501 | None:intergenic | 20.0% |
| !! | ATGAGAATTCTAAATTATTC+AGG | + | chr4_3:72263483-72263502 | None:intergenic | 20.0% |
| !!! | AATTTATTTTATTTCATGCC+AGG | + | chr4_3:72263698-72263717 | None:intergenic | 20.0% |
| !! | TGAGTCAAAACTTATTATTT+GGG | + | chr4_3:72265198-72265217 | None:intergenic | 20.0% |
| !! | TTGAGTCAAAACTTATTATT+TGG | + | chr4_3:72265199-72265218 | None:intergenic | 20.0% |
| !!! | ATTGAAAAATTTAACTTTGG+TGG | + | chr4_3:72265668-72265687 | None:intergenic | 20.0% |
| !! | TTTACTCTATATAACAGATT+TGG | + | chr4_3:72265707-72265726 | None:intergenic | 20.0% |
| !!! | TAAGTGATGACATTTTATAT+AGG | + | chr4_3:72265834-72265853 | None:intergenic | 20.0% |
| !! | AAAACGTATTTAGTAGTTTA+TGG | - | chr4_3:72266065-72266084 | Msa0661050:intron | 20.0% |
| !! | AAAAAAACAAACTAAGAGTA+TGG | - | chr4_3:72266178-72266197 | Msa0661050:intron | 20.0% |
| !! | AAAACGTATTTAGTAGTTTA+TGG | - | chr4_3:72266065-72266084 | Msa0661050:intron | 20.0% |
| !!! | CTTATTTTGTTTTTGTTTGA+TGG | + | chr4_3:72266415-72266434 | None:intergenic | 20.0% |
| !! | AAAACGTATTTAGTAGTTTA+TGG | - | chr4_3:72266065-72266084 | Msa0661050:intron | 20.0% |
| !! | AAAACGTATTTAGTAGTTTA+TGG | - | chr4_3:72266065-72266084 | Msa0661050:intron | 20.0% |
| !! | CAAAAACAAAAAAACATATG+GGG | - | chr4_3:72266738-72266757 | Msa0661050:intron | 20.0% |
| !!! | TGCTATTTTCTCTATTTATT+TGG | + | chr4_3:72266780-72266799 | None:intergenic | 20.0% |
| !! | AAAACGTATTTAGTAGTTTA+TGG | - | chr4_3:72266065-72266084 | Msa0661050:intron | 20.0% |
| !! | AAAACGTATTTAGTAGTTTA+TGG | - | chr4_3:72266065-72266084 | Msa0661050:intron | 20.0% |
| !! | CAAAAACAAAAAAACATATG+GGG | - | chr4_3:72266738-72266757 | Msa0661050:intron | 20.0% |
| !! | AAAAACAAAAAAACATATGG+GGG | - | chr4_3:72266739-72266758 | Msa0661050:intron | 20.0% |
| !!! | TGCTATTTTCTCTATTTATT+TGG | + | chr4_3:72266780-72266799 | None:intergenic | 20.0% |
| !! | AAAACGTATTTAGTAGTTTA+TGG | - | chr4_3:72266065-72266084 | Msa0661050:intron | 20.0% |
| !! | AAAACGTATTTAGTAGTTTA+TGG | - | chr4_3:72266065-72266084 | Msa0661050:intron | 20.0% |
| !! | CAAAAACAAAAAAACATATG+GGG | - | chr4_3:72266738-72266757 | Msa0661050:intron | 20.0% |
| !! | AAAAACAAAAAAACATATGG+GGG | - | chr4_3:72266739-72266758 | Msa0661050:intron | 20.0% |
| !!! | TGCTATTTTCTCTATTTATT+TGG | + | chr4_3:72266780-72266799 | None:intergenic | 20.0% |
| !!! | ACATAATTAACCTCAATTTT+TGG | - | chr4_3:72267957-72267976 | Msa0661050:CDS | 20.0% |
| !!! | TATTAGTACTTTGATGATGA+GGG | + | chr4_3:72259045-72259064 | None:intergenic | 25.0% |
| ! | CCATGATAATTAAGAATGAA+TGG | + | chr4_3:72259109-72259128 | None:intergenic | 25.0% |
| ! | CCATTCATTCTTAATTATCA+TGG | - | chr4_3:72259106-72259125 | Msa0661050:intron | 25.0% |
| ! | ATACTTCAGCAATAAAATAG+AGG | + | chr4_3:72259839-72259858 | None:intergenic | 25.0% |
| ! | ATGAAATTAAATGTGTCAGT+CGG | + | chr4_3:72259895-72259914 | None:intergenic | 25.0% |
| ! | AAAGAAGATGATGTTAGATT+TGG | - | chr4_3:72260114-72260133 | Msa0661050:intron | 25.0% |
| ! | AAGAAGATGATGTTAGATTT+GGG | - | chr4_3:72260115-72260134 | Msa0661050:intron | 25.0% |
| ! | AAGTAAACACACATAAAAGT+CGG | + | chr4_3:72260340-72260359 | None:intergenic | 25.0% |
| ! | TAAGTAAATGTTTGGTTATG+TGG | + | chr4_3:72261062-72261081 | None:intergenic | 25.0% |
| ! | TTCAAAAAAGAAACAATGGA+TGG | + | chr4_3:72261377-72261396 | None:intergenic | 25.0% |
| ! | TATAGCATATAAGATCTTGT+TGG | - | chr4_3:72261806-72261825 | Msa0661050:intron | 25.0% |
| ! | TTAAGTTCAAAATTGTGCAT+TGG | - | chr4_3:72261898-72261917 | Msa0661050:intron | 25.0% |
| !!! | GTGCATTTTTTAAAGTTAAG+GGG | + | chr4_3:72262123-72262142 | None:intergenic | 25.0% |
| ! | GTGGTGAAAAAAAATAATCA+TGG | + | chr4_3:72262173-72262192 | None:intergenic | 25.0% |
| !! | TTGCACAAAAAGTTAGATTT+TGG | - | chr4_3:72262357-72262376 | Msa0661050:intron | 25.0% |
| ! | TTGTATCAATTAAATTGGGA+CGG | + | chr4_3:72262447-72262466 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | - | chr4_3:72262510-72262529 | Msa0661050:intron | 25.0% |
| !! | TTGAAATAGGTCAGTTATTT+TGG | - | chr4_3:72262598-72262617 | Msa0661050:intron | 25.0% |
| !!! | TGAAATAGGTCAGTTATTTT+GGG | - | chr4_3:72262599-72262618 | Msa0661050:intron | 25.0% |
| ! | AAAGAAAAAGTTGCTACAAA+TGG | + | chr4_3:72263135-72263154 | None:intergenic | 25.0% |
| !!! | GGGTTTTATTGGTTTTATTT+TGG | + | chr4_3:72263462-72263481 | None:intergenic | 25.0% |
| ! | TAGAATTCTCATTATCACAT+TGG | - | chr4_3:72263491-72263510 | Msa0661050:intron | 25.0% |
| ! | CTTATATTAGTAGTTGCATT+TGG | + | chr4_3:72263535-72263554 | None:intergenic | 25.0% |
| ! | TCAATTCTCAACAATTGAAT+CGG | - | chr4_3:72263601-72263620 | Msa0661050:intron | 25.0% |
| !!! | CGATTATTTTAAATGGCATA+AGG | - | chr4_3:72263732-72263751 | Msa0661050:intron | 25.0% |
| ! | ATATATATAGTTCGGAAGAA+AGG | - | chr4_3:72263940-72263959 | Msa0661050:three_prime_UTR | 25.0% |
| !! | AGTCTTTCAGAATTTAAGAT+AGG | + | chr4_3:72264061-72264080 | None:intergenic | 25.0% |
| !!! | GACAACATTATTAGTTTTGT+TGG | - | chr4_3:72264089-72264108 | Msa0661050:CDS | 25.0% |
| ! | ATAATATCAGGGAACAATAT+TGG | + | chr4_3:72264378-72264397 | None:intergenic | 25.0% |
| ! | AGAAATATTGATCAACCATT+AGG | + | chr4_3:72264462-72264481 | None:intergenic | 25.0% |
| ! | ACACAGGATGAAAATATTAA+TGG | + | chr4_3:72264588-72264607 | None:intergenic | 25.0% |
| ! | ATATTAGAGACAACAATGAT+GGG | + | chr4_3:72264845-72264864 | None:intergenic | 25.0% |
| ! | AATATTAGAGACAACAATGA+TGG | + | chr4_3:72264846-72264865 | None:intergenic | 25.0% |
| ! | TAAAATTGACCAAAAACATG+AGG | + | chr4_3:72264947-72264966 | None:intergenic | 25.0% |
| !!! | TCATGTTTTTGGTCAATTTT+AGG | - | chr4_3:72264946-72264965 | Msa0661050:intron | 25.0% |
| !!! | TGGTTTTTTTCTTCATTGAT+GGG | + | chr4_3:72265415-72265434 | None:intergenic | 25.0% |
| !!! | ATAAGTTGATTGTAAGATTC+AGG | - | chr4_3:72265561-72265580 | Msa0661050:CDS | 25.0% |
| ! | TAATGAGAATTGAATATACC+TGG | - | chr4_3:72265787-72265806 | Msa0661050:intron | 25.0% |
| ! | GTATTTATCCAAACATAATC+TGG | - | chr4_3:72265865-72265884 | Msa0661050:intron | 25.0% |
| ! | AAAAAAAAACATATGGGGAT+CGG | - | chr4_3:72266314-72266333 | Msa0661050:intron | 25.0% |
| !!! | TGCTATTTTCTCTATCTATT+TGG | + | chr4_3:72266351-72266370 | None:intergenic | 25.0% |
| !! | AGTTGTCTTAAACAACTTTT+TGG | + | chr4_3:72267985-72268004 | None:intergenic | 25.0% |
| !! | TACCTTAATTTTTGTGTAAG+AGG | - | chr4_3:72268051-72268070 | Msa0661050:five_prime_UTR | 25.0% |
| !! | GTATTAGTACTTTGATGATG+AGG | + | chr4_3:72259046-72259065 | None:intergenic | 30.0% |
| TGATGAAATAGGTTAAGGTA+GGG | + | chr4_3:72259083-72259102 | None:intergenic | 30.0% | |
| ATGATGAAATAGGTTAAGGT+AGG | + | chr4_3:72259084-72259103 | None:intergenic | 30.0% | |
| ATGAATGGCAATGATGAAAT+AGG | + | chr4_3:72259094-72259113 | None:intergenic | 30.0% | |
| TCCAACAAATTCAACATCAA+CGG | - | chr4_3:72259215-72259234 | Msa0661050:intron | 30.0% | |
| ! | ATTCTGATTTCTCCTGATTT+TGG | - | chr4_3:72259257-72259276 | Msa0661050:intron | 30.0% |
| TATGTATGAGATCCAAAATC+AGG | + | chr4_3:72259272-72259291 | None:intergenic | 30.0% | |
| AACCATATGCATATGTTGTT+GGG | + | chr4_3:72259369-72259388 | None:intergenic | 30.0% | |
| TTCTAAATACCATCAAAGCT+CGG | - | chr4_3:72259713-72259732 | Msa0661050:intron | 30.0% | |
| TTTGTGCATTAAGTAGGTAT+TGG | + | chr4_3:72259785-72259804 | None:intergenic | 30.0% | |
| TGAAATTAAATGTGTCAGTC+GGG | + | chr4_3:72259894-72259913 | None:intergenic | 30.0% | |
| TATATTATGTGTTACCGTGT+TGG | - | chr4_3:72259937-72259956 | Msa0661050:intron | 30.0% | |
| GTATATAGATGTCTAGACAA+AGG | - | chr4_3:72260004-72260023 | Msa0661050:intron | 30.0% | |
| ATGATTGGAAGAGTTAAAAG+TGG | - | chr4_3:72260516-72260535 | Msa0661050:intron | 30.0% | |
| TGATTGGAAGAGTTAAAAGT+GGG | - | chr4_3:72260517-72260536 | Msa0661050:intron | 30.0% | |
| TGTTTGTTTAATGTAGTACG+AGG | - | chr4_3:72260684-72260703 | Msa0661050:intron | 30.0% | |
| TTAGACAGTAGTATACTGTA+GGG | + | chr4_3:72261179-72261198 | None:intergenic | 30.0% | |
| ATTAGACAGTAGTATACTGT+AGG | + | chr4_3:72261180-72261199 | None:intergenic | 30.0% | |
| GTATACTACTGTCTAATATG+CGG | - | chr4_3:72261183-72261202 | Msa0661050:intron | 30.0% | |
| !! | GTTTGTTGTACACATTTCAT+TGG | - | chr4_3:72261473-72261492 | Msa0661050:intron | 30.0% |
| TCAACTAGGTCACTTAATAT+GGG | - | chr4_3:72261935-72261954 | Msa0661050:intron | 30.0% | |
| ! | GTTTCAAACATTTGAGTTAG+TGG | + | chr4_3:72262192-72262211 | None:intergenic | 30.0% |
| TGTATAAATAAAGGGGAAAG+TGG | - | chr4_3:72262495-72262514 | Msa0661050:intron | 30.0% | |
| AGAAAATGTGTCAGTTATTC+CGG | - | chr4_3:72262634-72262653 | Msa0661050:intron | 30.0% | |
| ! | TAACAGCACTGAAAATATCA+GGG | + | chr4_3:72262738-72262757 | None:intergenic | 30.0% |
| ! | ATAACAGCACTGAAAATATC+AGG | + | chr4_3:72262739-72262758 | None:intergenic | 30.0% |
| !! | TGATATTTTCAGTGCTGTTA+TGG | - | chr4_3:72262738-72262757 | Msa0661050:intron | 30.0% |
| CAGTCAAAGTAAACTTGAAA+AGG | + | chr4_3:72262814-72262833 | None:intergenic | 30.0% | |
| !!! | AATGTTAGGTTCACTGATTT+TGG | - | chr4_3:72262858-72262877 | Msa0661050:intron | 30.0% |
| ! | CAAATTGATTGCAGATGTTT+TGG | - | chr4_3:72262974-72262993 | Msa0661050:intron | 30.0% |
| !!! | ATGTTTTGGTGAGTACTAAT+AGG | - | chr4_3:72262988-72263007 | Msa0661050:intron | 30.0% |
| !!! | TGTTTTGGTGAGTACTAATA+GGG | - | chr4_3:72262989-72263008 | Msa0661050:intron | 30.0% |
| ! | TTATGTGTAGGGAAATCTTT+TGG | - | chr4_3:72263268-72263287 | Msa0661050:intron | 30.0% |
| GGACAATCTCTTAAAAATGT+TGG | + | chr4_3:72264228-72264247 | None:intergenic | 30.0% | |
| !! | CATTTTTAAGAGATTGTCCT+TGG | - | chr4_3:72264229-72264248 | Msa0661050:intron | 30.0% |
| ACGTAAACAGTTTCCTATTA+TGG | + | chr4_3:72264283-72264302 | None:intergenic | 30.0% | |
| !! | AAAGGAAGTTTTGTATCAGA+TGG | - | chr4_3:72264312-72264331 | Msa0661050:intron | 30.0% |
| TTGAGGCAAAGATAATATCA+GGG | + | chr4_3:72264389-72264408 | None:intergenic | 30.0% | |
| TCCCCATTTGCATAATTATA+AGG | - | chr4_3:72264418-72264437 | Msa0661050:intron | 30.0% | |
| GCCTTATAATTATGCAAATG+GGG | + | chr4_3:72264422-72264441 | None:intergenic | 30.0% | |
| CGCCTTATAATTATGCAAAT+GGG | + | chr4_3:72264423-72264442 | None:intergenic | 30.0% | |
| ! | ATATTTTCATCCTGTGTAGA+CGG | - | chr4_3:72264591-72264610 | Msa0661050:intron | 30.0% |
| !!! | AAGTATGTTTTTTTCTCACC+AGG | - | chr4_3:72264627-72264646 | Msa0661050:intron | 30.0% |
| ! | TACATTTTATCGATGATTCC+TGG | + | chr4_3:72264648-72264667 | None:intergenic | 30.0% |
| CAGTGAATCATCAATATCAT+TGG | - | chr4_3:72264674-72264693 | Msa0661050:intron | 30.0% | |
| GAATCATCAATATCATTGGT+AGG | - | chr4_3:72264678-72264697 | Msa0661050:intron | 30.0% | |
| TATTAGAGACAACAATGATG+GGG | + | chr4_3:72264844-72264863 | None:intergenic | 30.0% | |
| ! | TGGATTTTAAATGTTGGAGA+TGG | + | chr4_3:72264870-72264889 | None:intergenic | 30.0% |
| TGATTTCAGGCAAATTCTTT+CGG | + | chr4_3:72265048-72265067 | None:intergenic | 30.0% | |
| !!! | AGCAGTTGATAAGACTTTTA+GGG | + | chr4_3:72265141-72265160 | None:intergenic | 30.0% |
| !!! | AAGCAGTTGATAAGACTTTT+AGG | + | chr4_3:72265142-72265161 | None:intergenic | 30.0% |
| ! | TTTTGACGATAGCATCAAAT+GGG | + | chr4_3:72265322-72265341 | None:intergenic | 30.0% |
| !! | TTTTTCTTCATTGATGGGTA+TGG | + | chr4_3:72265410-72265429 | None:intergenic | 30.0% |
| !!! | GTGGTTTTTTTCTTCATTGA+TGG | + | chr4_3:72265416-72265435 | None:intergenic | 30.0% |
| TAATCATCGTGATCTAATTC+TGG | + | chr4_3:72265523-72265542 | None:intergenic | 30.0% | |
| TTGTAAGATTCAGGATTCAA+AGG | - | chr4_3:72265570-72265589 | Msa0661050:CDS | 30.0% | |
| TGGAGATAGAAAAATTGTTG+CGG | + | chr4_3:72265648-72265667 | None:intergenic | 30.0% | |
| ! | TGAATATACCTGGAATTTTC+AGG | - | chr4_3:72265797-72265816 | Msa0661050:intron | 30.0% |
| GTCATCACTTAAATACTTTC+AGG | - | chr4_3:72265843-72265862 | Msa0661050:intron | 30.0% | |
| ! | AAACAAACTAAGAGTATGGA+AGG | - | chr4_3:72266182-72266201 | Msa0661050:intron | 30.0% |
| ACAAAAAAACATATGGGGAT+CGG | - | chr4_3:72266743-72266762 | Msa0661050:intron | 30.0% | |
| ATGAAATAGGTTAAGGTAGG+GGG | + | chr4_3:72259081-72259100 | None:intergenic | 35.0% | |
| GATGAAATAGGTTAAGGTAG+GGG | + | chr4_3:72259082-72259101 | None:intergenic | 35.0% | |
| GGCAATGATGAAATAGGTTA+AGG | + | chr4_3:72259088-72259107 | None:intergenic | 35.0% | |
| ACCGTTGATGTTGAATTTGT+TGG | + | chr4_3:72259219-72259238 | None:intergenic | 35.0% | |
| TACCCAACAACATATGCATA+TGG | - | chr4_3:72259364-72259383 | Msa0661050:intron | 35.0% | |
| GAACCATATGCATATGTTGT+TGG | + | chr4_3:72259370-72259389 | None:intergenic | 35.0% | |
| TCACCTTTATGCTCAAATCA+GGG | - | chr4_3:72259573-72259592 | Msa0661050:intron | 35.0% | |
| CTCGAATTTGTGCATTAAGT+AGG | + | chr4_3:72259791-72259810 | None:intergenic | 35.0% | |
| CTTCAGCAATAAAATAGAGG+TGG | + | chr4_3:72259836-72259855 | None:intergenic | 35.0% | |
| TGCTTGACATTCTTCGAATT+AGG | - | chr4_3:72259864-72259883 | Msa0661050:intron | 35.0% | |
| AGATGATGTTAGATTTGGGA+TGG | - | chr4_3:72260119-72260138 | Msa0661050:intron | 35.0% | |
| ACACATAAAAGTCGGTAAAC+GGG | + | chr4_3:72260332-72260351 | None:intergenic | 35.0% | |
| CACACATAAAAGTCGGTAAA+CGG | + | chr4_3:72260333-72260352 | None:intergenic | 35.0% | |
| TACTTTGAACTTTGTGAGCA+TGG | - | chr4_3:72260355-72260374 | Msa0661050:intron | 35.0% | |
| !!! | GTGAGCATGGTTTTAAATTG+TGG | - | chr4_3:72260368-72260387 | Msa0661050:intron | 35.0% |
| !! | AACCACAATTTTAACCGCAT+TGG | - | chr4_3:72260421-72260440 | Msa0661050:intron | 35.0% |
| !! | ACCACAATTTTAACCGCATT+GGG | - | chr4_3:72260422-72260441 | Msa0661050:intron | 35.0% |
| GAAATATCTATGTGTCAGCT+TGG | + | chr4_3:72260719-72260738 | None:intergenic | 35.0% | |
| ! | GTTGGACGTCTACAATTTTA+AGG | - | chr4_3:72260848-72260867 | Msa0661050:intron | 35.0% |
| ! | TGTTTGTTAGCTAGTAGTTG+AGG | - | chr4_3:72261123-72261142 | Msa0661050:intron | 35.0% |
| TAGTAATACAGCCACATGTA+GGG | + | chr4_3:72261255-72261274 | None:intergenic | 35.0% | |
| ATAGTAATACAGCCACATGT+AGG | + | chr4_3:72261256-72261275 | None:intergenic | 35.0% | |
| AAGACTACATGGTTCAAACA+TGG | + | chr4_3:72261317-72261336 | None:intergenic | 35.0% | |
| ATGGATAAGAGAAGACTACA+TGG | + | chr4_3:72261328-72261347 | None:intergenic | 35.0% | |
| AGTCTTCTCTTATCCATCAT+CGG | - | chr4_3:72261331-72261350 | Msa0661050:intron | 35.0% | |
| CTAGAGAGAATCAGCAAAAT+TGG | + | chr4_3:72261444-72261463 | None:intergenic | 35.0% | |
| !! | TGTTTACATGTGATTTGGTC+AGG | - | chr4_3:72261504-72261523 | Msa0661050:intron | 35.0% |
| ! | CTAGATCATTTAAAACGGGA+CGG | + | chr4_3:72261718-72261737 | None:intergenic | 35.0% |
| GTCAACTAGGTCACTTAATA+TGG | - | chr4_3:72261934-72261953 | Msa0661050:intron | 35.0% | |
| GAGACACTTATAACCATTTG+AGG | - | chr4_3:72262084-72262103 | Msa0661050:intron | 35.0% | |
| ACACTTATAACCATTTGAGG+TGG | - | chr4_3:72262087-72262106 | Msa0661050:intron | 35.0% | |
| ! | CACTTATAACCATTTGAGGT+GGG | - | chr4_3:72262088-72262107 | Msa0661050:intron | 35.0% |
| TTAATTGTACCCACCTCAAA+TGG | + | chr4_3:72262100-72262119 | None:intergenic | 35.0% | |
| ! | AAATGTTTGAAACCTGAGTC+AGG | - | chr4_3:72262199-72262218 | Msa0661050:intron | 35.0% |
| ! | AATGTTTGAAACCTGAGTCA+GGG | - | chr4_3:72262200-72262219 | Msa0661050:intron | 35.0% |
| TCATCTCAATCTCCAAATGT+GGG | + | chr4_3:72262315-72262334 | None:intergenic | 35.0% | |
| ATCATCTCAATCTCCAAATG+TGG | + | chr4_3:72262316-72262335 | None:intergenic | 35.0% | |
| ! | TAACTTTTTGTGCAAGCAAG+AGG | + | chr4_3:72262352-72262371 | None:intergenic | 35.0% |
| TATCAATTAAATTGGGACGG+AGG | + | chr4_3:72262444-72262463 | None:intergenic | 35.0% | |
| GAAAATGTGTCAGTTATTCC+GGG | - | chr4_3:72262635-72262654 | Msa0661050:intron | 35.0% | |
| GATTCATGTTAGTACTTGTG+TGG | - | chr4_3:72263167-72263186 | Msa0661050:intron | 35.0% | |
| TAAAGAAAAGCTGGTTGAAG+AGG | - | chr4_3:72263219-72263238 | Msa0661050:intron | 35.0% | |
| TCCCTACACATAAATCCAAT+CGG | + | chr4_3:72263261-72263280 | None:intergenic | 35.0% | |
| ! | TTTGGAATCAGCAAAAGTCA+TGG | + | chr4_3:72263645-72263664 | None:intergenic | 35.0% |
| CATAAAGATGATGATCAACC+TGG | - | chr4_3:72263677-72263696 | Msa0661050:intron | 35.0% | |
| TAACTGTCCGTGTGAAAATA+TGG | - | chr4_3:72264185-72264204 | Msa0661050:intron | 35.0% | |
| AACTGTCCGTGTGAAAATAT+GGG | - | chr4_3:72264186-72264205 | Msa0661050:intron | 35.0% | |
| ! | CCAAAACCCATATTTTCACA+CGG | + | chr4_3:72264195-72264214 | None:intergenic | 35.0% |
| ATGACTATCAATAAGAGCCA+AGG | + | chr4_3:72264249-72264268 | None:intergenic | 35.0% | |
| ATCGCAAATGAGACCATAAT+AGG | - | chr4_3:72264267-72264286 | Msa0661050:intron | 35.0% | |
| TGTTTACGTTGAAACGTGAA+AGG | - | chr4_3:72264294-72264313 | Msa0661050:intron | 35.0% | |
| !! | AGTTTTGTATCAGATGGAGA+TGG | - | chr4_3:72264318-72264337 | Msa0661050:intron | 35.0% |
| ATGGAGACAAAGTCAATCTT+GGG | - | chr4_3:72264337-72264356 | Msa0661050:intron | 35.0% | |
| AGGGAACAATATTGGACAAA+AGG | + | chr4_3:72264370-72264389 | None:intergenic | 35.0% | |
| CTTGAGGCAAAGATAATATC+AGG | + | chr4_3:72264390-72264409 | None:intergenic | 35.0% | |
| GCGCCTTATAATTATGCAAA+TGG | + | chr4_3:72264424-72264443 | None:intergenic | 35.0% | |
| GTACCATTGCATAATCCTAA+TGG | - | chr4_3:72264444-72264463 | Msa0661050:intron | 35.0% | |
| CAACCATTAGGATTATGCAA+TGG | + | chr4_3:72264450-72264469 | None:intergenic | 35.0% | |
| AAACCATGAGTTAAATCTCC+AGG | + | chr4_3:72264508-72264527 | None:intergenic | 35.0% | |
| TGGAGATTTAACTCATGGTT+TGG | - | chr4_3:72264507-72264526 | Msa0661050:intron | 35.0% | |
| TTGACGGTGTTCAAAAATTC+TGG | - | chr4_3:72264543-72264562 | Msa0661050:intron | 35.0% | |
| CTCATATTCTCCAAAAGTGA+TGG | - | chr4_3:72264738-72264757 | Msa0661050:intron | 35.0% | |
| ! | TAGCACATATCCATCACTTT+TGG | + | chr4_3:72264751-72264770 | None:intergenic | 35.0% |
| TTCTTGATCAACATGTCATC+TGG | - | chr4_3:72264801-72264820 | Msa0661050:intron | 35.0% | |
| ! | GCTGACTGGATTTTAAATGT+TGG | + | chr4_3:72264876-72264895 | None:intergenic | 35.0% |
| AAAAACATGAGGCTTCAAAC+TGG | + | chr4_3:72264936-72264955 | None:intergenic | 35.0% | |
| !! | AGTTTGAAGCCTCATGTTTT+TGG | - | chr4_3:72264935-72264954 | Msa0661050:intron | 35.0% |
| !! | TATTCCTTTTGGAGGAAAAG+TGG | + | chr4_3:72265084-72265103 | None:intergenic | 35.0% |
| ATACTTCGTGACTCTAATCT+TGG | + | chr4_3:72265116-72265135 | None:intergenic | 35.0% | |
| ATAGCAGCATTACTTATTCC+AGG | + | chr4_3:72265299-72265318 | None:intergenic | 35.0% | |
| !! | GTTTTGACGATAGCATCAAA+TGG | + | chr4_3:72265323-72265342 | None:intergenic | 35.0% |
| ! | TCTCCAAATGAAGGTTTTAC+CGG | - | chr4_3:72265379-72265398 | Msa0661050:intron | 35.0% |
| TAGAAAAATTGTTGCGGAGA+AGG | + | chr4_3:72265642-72265661 | None:intergenic | 35.0% | |
| ATCCAAACATAATCTGGACT+TGG | - | chr4_3:72265871-72265890 | Msa0661050:intron | 35.0% | |
| TTCCAAGTCCAGATTATGTT+TGG | + | chr4_3:72265876-72265895 | None:intergenic | 35.0% | |
| AATTAAAGAAGCAGCTCAGT+GGG | + | chr4_3:72265953-72265972 | None:intergenic | 35.0% | |
| TAATTAAAGAAGCAGCTCAG+TGG | + | chr4_3:72265954-72265973 | None:intergenic | 35.0% | |
| ACAAAAAAACATATGGGGGT+CGG | - | chr4_3:72267172-72267191 | Msa0661050:intron | 35.0% | |
| ACAAAAAAACATATGGGGGT+CGG | - | chr4_3:72267172-72267191 | Msa0661050:intron | 35.0% | |
| !!! | CTTTTTGGAGCCAAAAATTG+AGG | + | chr4_3:72267970-72267989 | None:intergenic | 35.0% |
| CGCCTCTTACACAAAAATTA+AGG | + | chr4_3:72268056-72268075 | None:intergenic | 35.0% | |
| AGATCGTCTTCTTTCTCTTG+CGG | + | chr4_3:72259332-72259351 | None:intergenic | 40.0% | |
| CTTCTATCAGTTGAAGCCAA+TGG | - | chr4_3:72259515-72259534 | Msa0661050:intron | 40.0% | |
| GTCACCTTTATGCTCAAATC+AGG | - | chr4_3:72259572-72259591 | Msa0661050:intron | 40.0% | |
| CACCTTTATGCTCAAATCAG+GGG | - | chr4_3:72259574-72259593 | Msa0661050:intron | 40.0% | |
| ! | TCAGAATCATAGCTGTTTCC+AGG | + | chr4_3:72259639-72259658 | None:intergenic | 40.0% |
| TGAACAAACTCCAGCAACAT+GGG | + | chr4_3:72259757-72259776 | None:intergenic | 40.0% | |
| ATGAACAAACTCCAGCAACA+TGG | + | chr4_3:72259758-72259777 | None:intergenic | 40.0% | |
| TGCACAAATTCGAGCTAATC+AGG | - | chr4_3:72259797-72259816 | Msa0661050:intron | 40.0% | |
| GCAGCTTATAGAGAAAGTCA+TGG | - | chr4_3:72260060-72260079 | Msa0661050:intron | 40.0% | |
| TACCATTCTTCTGCACTTGT+GGG | + | chr4_3:72260095-72260114 | None:intergenic | 40.0% | |
| TTACCATTCTTCTGCACTTG+TGG | + | chr4_3:72260096-72260115 | None:intergenic | 40.0% | |
| CACATAAAAGTCGGTAAACG+GGG | + | chr4_3:72260331-72260350 | None:intergenic | 40.0% | |
| CCGTTTACCAATTATGGTTG+CGG | + | chr4_3:72260395-72260414 | None:intergenic | 40.0% | |
| CCGCAACCATAATTGGTAAA+CGG | - | chr4_3:72260392-72260411 | Msa0661050:intron | 40.0% | |
| GTAACGCCGTTTACCAATTA+TGG | + | chr4_3:72260401-72260420 | None:intergenic | 40.0% | |
| ACCCAATGCGGTTAAAATTG+TGG | + | chr4_3:72260426-72260445 | None:intergenic | 40.0% | |
| GCAATAAATCACACCCAATG+CGG | + | chr4_3:72260438-72260457 | None:intergenic | 40.0% | |
| ! | GATCAAAACGTCGATTGACT+AGG | - | chr4_3:72260870-72260889 | Msa0661050:intron | 40.0% |
| TAGCTAGTAGTTGAGGTAGT+TGG | - | chr4_3:72261130-72261149 | Msa0661050:intron | 40.0% | |
| GAGGTAGTTGGTTATTGACA+TGG | - | chr4_3:72261142-72261161 | Msa0661050:intron | 40.0% | |
| GTAGTTGGTTATTGACATGG+TGG | - | chr4_3:72261145-72261164 | Msa0661050:intron | 40.0% | |
| !! | CATGTGATTTGGTCAGGTAA+AGG | - | chr4_3:72261510-72261529 | Msa0661050:intron | 40.0% |
| AAAGCTTGTACTACTCTCTC+GGG | + | chr4_3:72261555-72261574 | None:intergenic | 40.0% | |
| CAAAGCTTGTACTACTCTCT+CGG | + | chr4_3:72261556-72261575 | None:intergenic | 40.0% | |
| !! | TATAAGAAGGTACCATGCAG+GGG | + | chr4_3:72261636-72261655 | None:intergenic | 40.0% |
| !! | CTATAAGAAGGTACCATGCA+GGG | + | chr4_3:72261637-72261656 | None:intergenic | 40.0% |
| !! | ACTATAAGAAGGTACCATGC+AGG | + | chr4_3:72261638-72261657 | None:intergenic | 40.0% |
| ! | ATCATTTAAAACGGGACGGA+GGG | + | chr4_3:72261714-72261733 | None:intergenic | 40.0% |
| CTAGGTCACTTAATATGGGA+CGG | - | chr4_3:72261939-72261958 | Msa0661050:intron | 40.0% | |
| TTAAGAACACCTCCCACATT+TGG | - | chr4_3:72262300-72262319 | Msa0661050:intron | 40.0% | |
| TTTGTGCAAGCAAGAGGAAT+AGG | + | chr4_3:72262346-72262365 | None:intergenic | 40.0% | |
| TTGGTGAGTACTAATAGGGA+TGG | - | chr4_3:72262993-72263012 | Msa0661050:intron | 40.0% | |
| TGCTTCACTTCTGCTTCAAT+AGG | + | chr4_3:72263099-72263118 | None:intergenic | 40.0% | |
| TCCCGATTGGATTTATGTGT+AGG | - | chr4_3:72263256-72263275 | Msa0661050:intron | 40.0% | |
| CCCTACACATAAATCCAATC+GGG | + | chr4_3:72263260-72263279 | None:intergenic | 40.0% | |
| CCCGATTGGATTTATGTGTA+GGG | - | chr4_3:72263257-72263276 | Msa0661050:intron | 40.0% | |
| ! | CCGTGTGAAAATATGGGTTT+TGG | - | chr4_3:72264192-72264211 | Msa0661050:intron | 40.0% |
| GATGGAGACAAAGTCAATCT+TGG | - | chr4_3:72264336-72264355 | Msa0661050:intron | 40.0% | |
| AATGGGGAATTTCGTACTTG+AGG | + | chr4_3:72264406-72264425 | None:intergenic | 40.0% | |
| ACATAATTGGAACTCCAACC+TGG | - | chr4_3:72264487-72264506 | Msa0661050:intron | 40.0% | |
| CATGAGTTAAATCTCCAGGT+TGG | + | chr4_3:72264504-72264523 | None:intergenic | 40.0% | |
| CAACCTGGAGATTTAACTCA+TGG | - | chr4_3:72264502-72264521 | Msa0661050:intron | 40.0% | |
| TGGCAAACCTGAAGATTTGA+CGG | - | chr4_3:72264527-72264546 | Msa0661050:intron | 40.0% | |
| TTGAACACCGTCAAATCTTC+AGG | + | chr4_3:72264537-72264556 | None:intergenic | 40.0% | |
| GACATGTTGATCAAGAACTC+AGG | + | chr4_3:72264798-72264817 | None:intergenic | 40.0% | |
| GCATCAACAACATCATGTCT+TGG | - | chr4_3:72265008-72265027 | Msa0661050:intron | 40.0% | |
| !! | ACAACCACTTTTCCTCCAAA+AGG | - | chr4_3:72265077-72265096 | Msa0661050:intron | 40.0% |
| TGACTCTAATCTTGGAAGTG+CGG | + | chr4_3:72265108-72265127 | None:intergenic | 40.0% | |
| ! | ATGAAGCTCTGATGCTTCAT+AGG | + | chr4_3:72265175-72265194 | None:intergenic | 40.0% |
| ! | TCAACGATTAGTTGCGCTAA+AGG | - | chr4_3:72265215-72265234 | Msa0661050:intron | 40.0% |
| ! | AAAGGATCATCTGGCTTGAT+AGG | - | chr4_3:72265233-72265252 | Msa0661050:intron | 40.0% |
| ! | AAGGATCATCTGGCTTGATA+GGG | - | chr4_3:72265234-72265253 | Msa0661050:intron | 40.0% |
| CGTCAAAACAATTTCTCCTC+TGG | - | chr4_3:72265334-72265353 | Msa0661050:intron | 40.0% | |
| AGATATCGCTCTCCAAATGA+AGG | - | chr4_3:72265370-72265389 | Msa0661050:intron | 40.0% | |
| GAACCGGTAAAACCTTCATT+TGG | + | chr4_3:72265385-72265404 | None:intergenic | 40.0% | |
| ! | TTCTTCATTGATGGGTATGG+CGG | + | chr4_3:72265407-72265426 | None:intergenic | 40.0% |
| !! | AGTTTTGTGGATGCGAACAT+CGG | + | chr4_3:72265438-72265457 | None:intergenic | 40.0% |
| ! | CGACACAATCATGAGTTTTG+TGG | + | chr4_3:72265451-72265470 | None:intergenic | 40.0% |
| CCAGAATGACTGAAGAACAA+AGG | + | chr4_3:72265482-72265501 | None:intergenic | 40.0% | |
| CCTTTGTTCTTCAGTCATTC+TGG | - | chr4_3:72265479-72265498 | Msa0661050:intron | 40.0% | |
| ! | TTCAAAGGCATGTTCACTTG+AGG | - | chr4_3:72265585-72265604 | Msa0661050:CDS | 40.0% |
| ATTAAAGAAGCAGCTCAGTG+GGG | + | chr4_3:72265952-72265971 | None:intergenic | 40.0% | |
| TGTTCTGTATGATCCATCCT+TGG | + | chr4_3:72268081-72268100 | None:intergenic | 40.0% | |
| AATAGGTTAAGGTAGGGGGA+AGG | + | chr4_3:72259077-72259096 | None:intergenic | 45.0% | |
| GTTGACCTACACACTGGTAA+TGG | - | chr4_3:72259131-72259150 | Msa0661050:intron | 45.0% | |
| !! | TACACACTGGTAATGGCAGT+GGG | - | chr4_3:72259138-72259157 | Msa0661050:intron | 45.0% |
| ! | TGAGTTAAGTCCGTTGATGG+CGG | + | chr4_3:72259194-72259213 | None:intergenic | 45.0% |
| GAGTGAGTTAAGTCCGTTGA+TGG | + | chr4_3:72259197-72259216 | None:intergenic | 45.0% | |
| !! | CAAACCGATTCGCAATCGTT+GGG | + | chr4_3:72259413-72259432 | None:intergenic | 45.0% |
| !! | ACAAACCGATTCGCAATCGT+TGG | + | chr4_3:72259414-72259433 | None:intergenic | 45.0% |
| !!! | GTTCTTTTTCTGCTGACTCG+AGG | - | chr4_3:72259444-72259463 | Msa0661050:intron | 45.0% |
| CAGCAACTCATTGAGTCCAT+TGG | + | chr4_3:72259534-72259553 | None:intergenic | 45.0% | |
| ! | CAATGGACTCAATGAGTTGC+TGG | - | chr4_3:72259532-72259551 | Msa0661050:intron | 45.0% |
| ! | GCTGGTCTCAATCATCTCTT+TGG | - | chr4_3:72259550-72259569 | Msa0661050:intron | 45.0% |
| ! | CTCCCCTGATTTGAGCATAA+AGG | + | chr4_3:72259579-72259598 | None:intergenic | 45.0% |
| ! | TCAAATCAGGGGAGTTCTGA+AGG | - | chr4_3:72259585-72259604 | Msa0661050:intron | 45.0% |
| TGAAGGCTCTTTGTCTCCTA+AGG | - | chr4_3:72259602-72259621 | Msa0661050:intron | 45.0% | |
| ATACCATCAAAGCTCGGAGA+TGG | - | chr4_3:72259719-72259738 | Msa0661050:intron | 45.0% | |
| ACTTCTCAATCCCATGTTGC+TGG | - | chr4_3:72259744-72259763 | Msa0661050:intron | 45.0% | |
| GGAACAAACAGACACCAACA+CGG | + | chr4_3:72259954-72259973 | None:intergenic | 45.0% | |
| ACCATTCTTCTGCACTTGTG+GGG | + | chr4_3:72260094-72260113 | None:intergenic | 45.0% | |
| GAGAAGCAGACAGATTTCCA+GGG | - | chr4_3:72260186-72260205 | Msa0661050:intron | 45.0% | |
| ACATGATGTGCCTCTTGAAC+CGG | + | chr4_3:72260217-72260236 | None:intergenic | 45.0% | |
| ! | GTTCAAGAGGCACATCATGT+GGG | - | chr4_3:72260217-72260236 | Msa0661050:intron | 45.0% |
| TCACATCAGACTAAGAGACC+TGG | - | chr4_3:72260282-72260301 | Msa0661050:intron | 45.0% | |
| GACATAGTTCGTTGCATACC+AGG | + | chr4_3:72260303-72260322 | None:intergenic | 45.0% | |
| TTGTGGTCCGCAACCATAAT+TGG | - | chr4_3:72260385-72260404 | Msa0661050:intron | 45.0% | |
| AATACAGCCACATGTAGGGT+CGG | + | chr4_3:72261251-72261270 | None:intergenic | 45.0% | |
| TCTCTTATCCATCATCGGTG+TGG | - | chr4_3:72261336-72261355 | Msa0661050:intron | 45.0% | |
| TCTCTCGGGTATAAGAACAG+TGG | + | chr4_3:72261541-72261560 | None:intergenic | 45.0% | |
| TGGCAGCAATTTGGTCAAAG+TGG | + | chr4_3:72261584-72261603 | None:intergenic | 45.0% | |
| ! | GATCATTTAAAACGGGACGG+AGG | + | chr4_3:72261715-72261734 | None:intergenic | 45.0% |
| CATACGTGACATGGTCAACT+AGG | - | chr4_3:72261921-72261940 | Msa0661050:intron | 45.0% | |
| GTCACTTAATATGGGACGGA+GGG | - | chr4_3:72261943-72261962 | Msa0661050:intron | 45.0% | |
| TCTCAATCTCCAAATGTGGG+AGG | + | chr4_3:72262312-72262331 | None:intergenic | 45.0% | |
| ATGTGTCAGTTATTCCGGGA+CGG | - | chr4_3:72262639-72262658 | Msa0661050:intron | 45.0% | |
| AGATATTACTTCCTCCGTCC+CGG | + | chr4_3:72262656-72262675 | None:intergenic | 45.0% | |
| TCTAGCAAGTTGCTGTCACT+TGG | + | chr4_3:72262925-72262944 | None:intergenic | 45.0% | |
| !! | ATGCTGATTTGCGATGACGA+AGG | + | chr4_3:72264123-72264142 | None:intergenic | 45.0% |
| ! | TCTGGAGTGAGAATCTGATC+AGG | - | chr4_3:72264561-72264580 | Msa0661050:intron | 45.0% |
| AACTCAAAGAGTTCGCTGAC+TGG | + | chr4_3:72264890-72264909 | None:intergenic | 45.0% | |
| GCATTAATTCATCGCGCCTT+TGG | + | chr4_3:72264986-72265005 | None:intergenic | 45.0% | |
| !! | ACATCATGTCTTGGTGCTCT+TGG | - | chr4_3:72265017-72265036 | Msa0661050:intron | 45.0% |
| TTGTCTTGGGTGGTGATTTC+AGG | + | chr4_3:72265061-72265080 | None:intergenic | 45.0% | |
| GGAGGAAAAGTGGTTGTCTT+GGG | + | chr4_3:72265074-72265093 | None:intergenic | 45.0% | |
| TGGAGGAAAAGTGGTTGTCT+TGG | + | chr4_3:72265075-72265094 | None:intergenic | 45.0% | |
| ! | AGTGCGGATATTCCTTTTGG+AGG | + | chr4_3:72265092-72265111 | None:intergenic | 45.0% |
| !! | GGAAGTGCGGATATTCCTTT+TGG | + | chr4_3:72265095-72265114 | None:intergenic | 45.0% |
| AGTTGCGCTAAAGGATCATC+TGG | - | chr4_3:72265224-72265243 | Msa0661050:intron | 45.0% | |
| CATTACTTATTCCAGGTGGC+AGG | + | chr4_3:72265292-72265311 | None:intergenic | 45.0% | |
| GCAGCATTACTTATTCCAGG+TGG | + | chr4_3:72265296-72265315 | None:intergenic | 45.0% | |
| TCTGCAGCAATTAGATCCAG+AGG | + | chr4_3:72265353-72265372 | None:intergenic | 45.0% | |
| CGAAGACACCTGAAAATTCC+AGG | + | chr4_3:72265808-72265827 | None:intergenic | 45.0% | |
| TTTGTGTAAGAGGCGATCCA+AGG | - | chr4_3:72268061-72268080 | Msa0661050:five_prime_UTR | 45.0% | |
| !! | TATATATAAATATTAAAGAA+TGG | + | chr4_3:72262776-72262795 | None:intergenic | 5.0% |
| ATGGCTGTTGACCTACACAC+TGG | - | chr4_3:72259125-72259144 | Msa0661050:intron | 50.0% | |
| CACTGCCATTACCAGTGTGT+AGG | + | chr4_3:72259139-72259158 | None:intergenic | 50.0% | |
| !! | CTACACACTGGTAATGGCAG+TGG | - | chr4_3:72259137-72259156 | Msa0661050:intron | 50.0% |
| !! | ACACACTGGTAATGGCAGTG+GGG | - | chr4_3:72259139-72259158 | Msa0661050:intron | 50.0% |
| GGCGGGAGTAACGAATCATA+AGG | + | chr4_3:72259176-72259195 | None:intergenic | 50.0% | |
| TTCGTTACTCCCGCCATCAA+CGG | - | chr4_3:72259181-72259200 | Msa0661050:intron | 50.0% | |
| !! | GAGTTAAGTCCGTTGATGGC+GGG | + | chr4_3:72259193-72259212 | None:intergenic | 50.0% |
| TGATGTGCCTCGATGGAATG+AGG | + | chr4_3:72259308-72259327 | None:intergenic | 50.0% | |
| GTTGGGAGGAATGTCTAGCA+TGG | + | chr4_3:72259396-72259415 | None:intergenic | 50.0% | |
| TCCTCCCAACGATTGCGAAT+CGG | - | chr4_3:72259406-72259425 | Msa0661050:intron | 50.0% | |
| ! | TAGCTGTTTCCAGGCTCAGA+TGG | + | chr4_3:72259630-72259649 | None:intergenic | 50.0% |
| ! | TCTCCATCTCCGAGCTTTGA+TGG | + | chr4_3:72259725-72259744 | None:intergenic | 50.0% |
| TCTGCACTTGTGGGGACAAA+TGG | + | chr4_3:72260086-72260105 | None:intergenic | 50.0% | |
| TCCCCACAAGTGCAGAAGAA+TGG | - | chr4_3:72260090-72260109 | Msa0661050:intron | 50.0% | |
| TTGGGATGGCACCTTTGCAA+CGG | - | chr4_3:72260133-72260152 | Msa0661050:intron | 50.0% | |
| GGAGAAGCAGACAGATTTCC+AGG | - | chr4_3:72260185-72260204 | Msa0661050:intron | 50.0% | |
| ACAGATTTCCAGGGAGCAAC+CGG | - | chr4_3:72260195-72260214 | Msa0661050:intron | 50.0% | |
| ! | GGTTCAAGAGGCACATCATG+TGG | - | chr4_3:72260216-72260235 | Msa0661050:intron | 50.0% |
| ! | ACAGGTGTTTTCTTGCCACG+TGG | - | chr4_3:72260240-72260259 | Msa0661050:intron | 50.0% |
| ATTGTGACCGACCCTACATG+TGG | - | chr4_3:72261241-72261260 | Msa0661050:intron | 50.0% | |
| ! | GTGCATTGGCATACGTGACA+TGG | - | chr4_3:72261912-72261931 | Msa0661050:intron | 50.0% |
| GGTCACTTAATATGGGACGG+AGG | - | chr4_3:72261942-72261961 | Msa0661050:intron | 50.0% | |
| TGAAACCTGAGTCAGGGTCT+TGG | - | chr4_3:72262206-72262225 | Msa0661050:intron | 50.0% | |
| TCAGGGTCTTGGTTACGTCA+GGG | - | chr4_3:72262217-72262236 | Msa0661050:intron | 50.0% | |
| TCTTGGTTACGTCAGGGTCT+TGG | - | chr4_3:72262223-72262242 | Msa0661050:intron | 50.0% | |
| CCGTGATTGACGCTTCTGTA+GGG | + | chr4_3:72263027-72263046 | None:intergenic | 50.0% | |
| !! | CCCTACAGAAGCGTCAATCA+CGG | - | chr4_3:72263024-72263043 | Msa0661050:intron | 50.0% |
| TCCGTGATTGACGCTTCTGT+AGG | + | chr4_3:72263028-72263047 | None:intergenic | 50.0% | |
| AGATGATTCTGCCTCGAGAG+TGG | - | chr4_3:72263072-72263091 | Msa0661050:intron | 50.0% | |
| CTTCAATAGGTCCACTCTCG+AGG | + | chr4_3:72263086-72263105 | None:intergenic | 50.0% | |
| ATTTAGACCCGTGCGATGCA+CGG | - | chr4_3:72263353-72263372 | Msa0661050:intron | 50.0% | |
| GTGTGTGTGTGTGTGTGTGT+GGG | + | chr4_3:72263910-72263929 | None:intergenic | 50.0% | |
| TGTGTGTGTGTGTGTGTGTG+TGG | + | chr4_3:72263909-72263928 | None:intergenic | 50.0% | |
| TGCTGATAGTCCGTCTACAC+AGG | + | chr4_3:72264604-72264623 | None:intergenic | 50.0% | |
| GGACTCGCCAATGTTTCCAA+AGG | - | chr4_3:72264967-72264986 | Msa0661050:intron | 50.0% | |
| ! | CATCGCGCCTTTGGAAACAT+TGG | + | chr4_3:72264977-72264996 | None:intergenic | 50.0% |
| GGAAAAGTGGTTGTCTTGGG+TGG | + | chr4_3:72265071-72265090 | None:intergenic | 50.0% | |
| ! | ATTGATGGGTATGGCGGAAC+CGG | + | chr4_3:72265401-72265420 | None:intergenic | 50.0% |
| TTTGTGGATGCGAACATCGG+TGG | + | chr4_3:72265435-72265454 | None:intergenic | 50.0% | |
| AGGCATGTTCACTTGAGGCA+TGG | - | chr4_3:72265590-72265609 | Msa0661050:CDS | 50.0% | |
| ! | GGGGCACAGGTAGTTTTCTA+AGG | + | chr4_3:72265933-72265952 | None:intergenic | 50.0% |
| TGTAAGAGGCGATCCAAGGA+TGG | - | chr4_3:72268065-72268084 | Msa0661050:five_prime_UTR | 50.0% | |
| TCCACCTCCTCATTCCATCG+AGG | - | chr4_3:72259298-72259317 | Msa0661050:intron | 55.0% | |
| TGTGCCTCGATGGAATGAGG+AGG | + | chr4_3:72259305-72259324 | None:intergenic | 55.0% | |
| !! | ACCGATTCGCAATCGTTGGG+AGG | + | chr4_3:72259410-72259429 | None:intergenic | 55.0% |
| CCAGGCTCAGATGGTTCCTT+AGG | + | chr4_3:72259621-72259640 | None:intergenic | 55.0% | |
| CCTAAGGAACCATCTGAGCC+TGG | - | chr4_3:72259618-72259637 | Msa0661050:intron | 55.0% | |
| ATAGGACCAGGCCGTTGCAA+AGG | + | chr4_3:72260147-72260166 | None:intergenic | 55.0% | |
| TATGCACCAGCAGGCAGGTT+CGG | - | chr4_3:72260164-72260183 | Msa0661050:intron | 55.0% | |
| ! | AGAGGCACATCATGTGGGAC+AGG | - | chr4_3:72260222-72260241 | Msa0661050:intron | 55.0% |
| ! | GGTGTTTTCTTGCCACGTGG+TGG | - | chr4_3:72260243-72260262 | Msa0661050:intron | 55.0% |
| !! | AAAGCACTGACTCCACCACG+TGG | + | chr4_3:72260258-72260277 | None:intergenic | 55.0% |
| CATGTGCACCACACCGATGA+TGG | + | chr4_3:72261347-72261366 | None:intergenic | 55.0% | |
| GACCAAATTGCTGCCACCTC+TGG | - | chr4_3:72261588-72261607 | Msa0661050:intron | 55.0% | |
| GTCCAGAGGTGGCAGCAATT+TGG | + | chr4_3:72261593-72261612 | None:intergenic | 55.0% | |
| !! | AGAAGGTACCATGCAGGGGA+GGG | + | chr4_3:72261632-72261651 | None:intergenic | 55.0% |
| !! | AAGAAGGTACCATGCAGGGG+AGG | + | chr4_3:72261633-72261652 | None:intergenic | 55.0% |
| CGTAACCAAGACCCTGACTC+AGG | + | chr4_3:72262214-72262233 | None:intergenic | 55.0% | |
| GTCAGGGTCTTGGTTACGTC+AGG | - | chr4_3:72262216-72262235 | Msa0661050:intron | 55.0% | |
| TGTCAGTTATTCCGGGACGG+AGG | - | chr4_3:72262642-72262661 | Msa0661050:intron | 55.0% | |
| TTTAGACCCGTGCGATGCAC+GGG | - | chr4_3:72263354-72263373 | Msa0661050:intron | 55.0% | |
| TAATGTGCTGTCCTGCCACC+TGG | - | chr4_3:72265278-72265297 | Msa0661050:intron | 55.0% | |
| GCCTCGATGGAATGAGGAGG+TGG | + | chr4_3:72259302-72259321 | None:intergenic | 60.0% | |
| TTGCGGCTGATGTGCCTCGA+TGG | + | chr4_3:72259315-72259334 | None:intergenic | 60.0% | |
| ATGGCACCTTTGCAACGGCC+TGG | - | chr4_3:72260138-72260157 | Msa0661050:intron | 60.0% | |
| GAACCTGCCTGCTGGTGCAT+AGG | + | chr4_3:72260165-72260184 | None:intergenic | 60.0% | |
| CTCTTGAACCGGTTGCTCCC+TGG | + | chr4_3:72260206-72260225 | None:intergenic | 60.0% | |
| ! | CAGGGAGCAACCGGTTCAAG+AGG | - | chr4_3:72260204-72260223 | Msa0661050:intron | 60.0% |
| ACGAGGCTTAGGTCCAGAGG+TGG | + | chr4_3:72261604-72261623 | None:intergenic | 60.0% | |
| GACACGAGGCTTAGGTCCAG+AGG | + | chr4_3:72261607-72261626 | None:intergenic | 60.0% | |
| GGAGGGAAGACACGAGGCTT+AGG | + | chr4_3:72261615-72261634 | None:intergenic | 60.0% | |
| TAACCTCCCGTGCATCGCAC+GGG | + | chr4_3:72263363-72263382 | None:intergenic | 60.0% | |
| CTAACCTCCCGTGCATCGCA+CGG | + | chr4_3:72263364-72263383 | None:intergenic | 60.0% | |
| CACGCGTCACTTCACGTGCT+GGG | + | chr4_3:72264152-72264171 | None:intergenic | 60.0% | |
| TCACGCGTCACTTCACGTGC+TGG | + | chr4_3:72264153-72264172 | None:intergenic | 60.0% | |
| GCCTGGTCCTATGCACCAGC+AGG | - | chr4_3:72260155-72260174 | Msa0661050:intron | 65.0% | |
| GCCTGCTGGTGCATAGGACC+AGG | + | chr4_3:72260159-72260178 | None:intergenic | 65.0% | |
| GGTCCTATGCACCAGCAGGC+AGG | - | chr4_3:72260159-72260178 | Msa0661050:intron | 65.0% | |
| GCTTCTCCGAACCTGCCTGC+TGG | + | chr4_3:72260173-72260192 | None:intergenic | 65.0% | |
| TGCAGGGGAGGGAAGACACG+AGG | + | chr4_3:72261621-72261640 | None:intergenic | 65.0% | |
| CGTGTCTTCCCTCCCCTGCA+TGG | - | chr4_3:72261621-72261640 | Msa0661050:intron | 65.0% | |
| GAAGCAGCTCAGTGGGGCAC+AGG | + | chr4_3:72265946-72265965 | None:intergenic | 65.0% | |
| AGACCCGTGCGATGCACGGG+AGG | - | chr4_3:72263357-72263376 | Msa0661050:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 72259027 | 72268119 | 72259027 | ID=Msa0661050;Name=Msa0661050 |
| chr4_3 | mRNA | 72259027 | 72268119 | 72259027 | ID=Msa0661050-mRNA-1;Parent=Msa0661050;Name=Msa0661050-mRNA-1;_AED=0.05;_eAED=0.05;_QI=98|1|1|1|0.8|0.66|6|338|373 |
| chr4_3 | exon | 72259027 | 72259121 | 72259027 | ID=Msa0661050-mRNA-1:exon:21653;Parent=Msa0661050-mRNA-1 |
| chr4_3 | exon | 72263800 | 72264158 | 72263800 | ID=Msa0661050-mRNA-1:exon:21652;Parent=Msa0661050-mRNA-1 |
| chr4_3 | exon | 72265504 | 72265620 | 72265504 | ID=Msa0661050-mRNA-1:exon:21651;Parent=Msa0661050-mRNA-1 |
| chr4_3 | exon | 72266843 | 72267134 | 72266843 | ID=Msa0661050-mRNA-1:exon:21650;Parent=Msa0661050-mRNA-1 |
| chr4_3 | exon | 72267328 | 72267621 | 72267328 | ID=Msa0661050-mRNA-1:exon:21649;Parent=Msa0661050-mRNA-1 |
| chr4_3 | exon | 72267719 | 72268119 | 72267719 | ID=Msa0661050-mRNA-1:exon:21648;Parent=Msa0661050-mRNA-1 |
| chr4_3 | five_prime_UTR | 72268022 | 72268119 | 72268022 | ID=Msa0661050-mRNA-1:five_prime_utr;Parent=Msa0661050-mRNA-1 |
| chr4_3 | CDS | 72267719 | 72268021 | 72267719 | ID=Msa0661050-mRNA-1:cds;Parent=Msa0661050-mRNA-1 |
| chr4_3 | CDS | 72267328 | 72267621 | 72267328 | ID=Msa0661050-mRNA-1:cds;Parent=Msa0661050-mRNA-1 |
| chr4_3 | CDS | 72266843 | 72267134 | 72266843 | ID=Msa0661050-mRNA-1:cds;Parent=Msa0661050-mRNA-1 |
| chr4_3 | CDS | 72265504 | 72265620 | 72265504 | ID=Msa0661050-mRNA-1:cds;Parent=Msa0661050-mRNA-1 |
| chr4_3 | CDS | 72264043 | 72264158 | 72264043 | ID=Msa0661050-mRNA-1:cds;Parent=Msa0661050-mRNA-1 |
| chr4_3 | three_prime_UTR | 72263800 | 72264042 | 72263800 | ID=Msa0661050-mRNA-1:three_prime_utr;Parent=Msa0661050-mRNA-1 |
| chr4_3 | three_prime_UTR | 72259027 | 72259121 | 72259027 | ID=Msa0661050-mRNA-1:three_prime_utr;Parent=Msa0661050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
