Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208840 | XP_013457732.1 | 97.573 | 206 | 5 | 0 | 1 | 206 | 1 | 206 | 3.68e-148 | 420 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208840 | sp|Q9FGS5|NRT31_ARATH | 51.196 | 209 | 91 | 5 | 1 | 202 | 1 | 205 | 1.85e-64 | 201 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa1208840 | -0.803847 | 2.866760e-49 | -8.615850e-47 |
| Msa0024070 | Msa1208840 | -0.809608 | 1.739713e-50 | -8.615850e-47 |
| Msa0030710 | Msa1208840 | -0.812724 | 3.670408e-51 | -8.615850e-47 |
| Msa0034540 | Msa1208840 | 0.808752 | 2.654224e-50 | -8.615850e-47 |
| Msa0034590 | Msa1208840 | -0.810884 | 9.229865e-51 | -8.615850e-47 |
| Msa0037040 | Msa1208840 | -0.805021 | 1.632192e-49 | -8.615850e-47 |
| Msa0047630 | Msa1208840 | -0.829288 | 5.598244e-55 | -8.615850e-47 |
| Msa0078110 | Msa1208840 | -0.854157 | 1.483450e-61 | -8.615850e-47 |
| Msa0079100 | Msa1208840 | -0.803020 | 4.255146e-49 | -8.615850e-47 |
| Msa0081920 | Msa1208840 | 0.801943 | 7.093398e-49 | -8.615850e-47 |
| Msa0099300 | Msa1208840 | -0.803008 | 4.278168e-49 | -8.615850e-47 |
| Msa0107830 | Msa1208840 | 0.821277 | 4.397185e-53 | -8.615850e-47 |
| Msa0117650 | Msa1208840 | 0.813983 | 1.941571e-51 | -8.615850e-47 |
| Msa0606340 | Msa1208840 | -0.801444 | 8.978104e-49 | -8.615850e-47 |
| Msa0608280 | Msa1208840 | -0.818408 | 1.991092e-52 | -8.615850e-47 |
| Msa0612950 | Msa1208840 | -0.800546 | 1.369761e-48 | -8.615850e-47 |
| Msa0644340 | Msa1208840 | 0.803372 | 3.596942e-49 | -8.615850e-47 |
| Msa0648840 | Msa1208840 | -0.830721 | 2.504366e-55 | -8.615850e-47 |
| Msa0657260 | Msa1208840 | 0.842460 | 2.551997e-58 | -8.615850e-47 |
| Msa0661050 | Msa1208840 | 0.805702 | 1.174857e-49 | -8.615850e-47 |
| Msa0684390 | Msa1208840 | 0.812394 | 4.334802e-51 | -8.615850e-47 |
| Msa0693050 | Msa1208840 | -0.811580 | 6.520141e-51 | -8.615850e-47 |
| Msa0695250 | Msa1208840 | -0.802870 | 4.569688e-49 | -8.615850e-47 |
| Msa0701490 | Msa1208840 | 0.850400 | 1.739771e-60 | -8.615850e-47 |
| Msa0701560 | Msa1208840 | 0.850387 | 1.755418e-60 | -8.615850e-47 |
| Msa0744550 | Msa1208840 | 0.834370 | 3.117960e-56 | -8.615850e-47 |
| Msa0744560 | Msa1208840 | 0.829382 | 5.310945e-55 | -8.615850e-47 |
| Msa0746340 | Msa1208840 | 0.816798 | 4.592217e-52 | -8.615850e-47 |
| Msa0747620 | Msa1208840 | 0.813249 | 2.816379e-51 | -8.615850e-47 |
| Msa0772350 | Msa1208840 | 0.811710 | 6.110088e-51 | -8.615850e-47 |
| Msa0788490 | Msa1208840 | -0.837124 | 6.253904e-57 | -8.615850e-47 |
| Msa0793270 | Msa1208840 | 0.804338 | 2.266617e-49 | -8.615850e-47 |
| Msa0795320 | Msa1208840 | 0.806838 | 6.772286e-50 | -8.615850e-47 |
| Msa0809920 | Msa1208840 | 0.806218 | 9.153708e-50 | -8.615850e-47 |
| Msa0816390 | Msa1208840 | -0.844984 | 5.389350e-59 | -8.615850e-47 |
| Msa0826240 | Msa1208840 | 0.802304 | 5.978110e-49 | -8.615850e-47 |
| Msa0826360 | Msa1208840 | 0.833616 | 4.815363e-56 | -8.615850e-47 |
| Msa0833980 | Msa1208840 | -0.811956 | 5.402332e-51 | -8.615850e-47 |
| Msa0129290 | Msa1208840 | 0.820612 | 6.257106e-53 | -8.615850e-47 |
| Msa0129770 | Msa1208840 | 0.813469 | 2.519976e-51 | -8.615850e-47 |
| Msa0129820 | Msa1208840 | -0.805116 | 1.559398e-49 | -8.615850e-47 |
| Msa0131230 | Msa1208840 | -0.816410 | 5.609729e-52 | -8.615850e-47 |
| Msa0143640 | Msa1208840 | 0.821819 | 3.296657e-53 | -8.615850e-47 |
| Msa0143830 | Msa1208840 | 0.806575 | 7.695782e-50 | -8.615850e-47 |
| Msa0164350 | Msa1208840 | 0.858391 | 8.509830e-63 | -8.615850e-47 |
| Msa0177180 | Msa1208840 | -0.804380 | 2.221249e-49 | -8.615850e-47 |
| Msa0191470 | Msa1208840 | 0.802783 | 4.762478e-49 | -8.615850e-47 |
| Msa0193950 | Msa1208840 | 0.801802 | 7.582734e-49 | -8.615850e-47 |
| Msa0235820 | Msa1208840 | 0.801773 | 7.686359e-49 | -8.615850e-47 |
| Msa0369770 | Msa1208840 | -0.827718 | 1.340416e-54 | -8.615850e-47 |
| Msa0370360 | Msa1208840 | 0.838393 | 2.953967e-57 | -8.615850e-47 |
| Msa0379680 | Msa1208840 | 0.813949 | 1.975236e-51 | -8.615850e-47 |
| Msa0390200 | Msa1208840 | 0.819689 | 1.017683e-52 | -8.615850e-47 |
| Msa0404840 | Msa1208840 | -0.806360 | 8.544640e-50 | -8.615850e-47 |
| Msa0417140 | Msa1208840 | -0.819827 | 9.465617e-53 | -8.615850e-47 |
| Msa0419150 | Msa1208840 | -0.802424 | 5.647609e-49 | -8.615850e-47 |
| Msa0421080 | Msa1208840 | 0.803793 | 2.942277e-49 | -8.615850e-47 |
| Msa0429840 | Msa1208840 | 0.808492 | 3.016369e-50 | -8.615850e-47 |
| Msa0433090 | Msa1208840 | 0.805494 | 1.299107e-49 | -8.615850e-47 |
| Msa0433890 | Msa1208840 | -0.821026 | 5.024365e-53 | -8.615850e-47 |
| Msa0434460 | Msa1208840 | 0.800550 | 1.367500e-48 | -8.615850e-47 |
| Msa0444770 | Msa1208840 | -0.800892 | 1.164204e-48 | -8.615850e-47 |
| Msa0446110 | Msa1208840 | -0.802275 | 6.060537e-49 | -8.615850e-47 |
| Msa0450830 | Msa1208840 | -0.811816 | 5.793290e-51 | -8.615850e-47 |
| Msa0460950 | Msa1208840 | 0.809128 | 2.205074e-50 | -8.615850e-47 |
| Msa0463980 | Msa1208840 | -0.822638 | 2.128049e-53 | -8.615850e-47 |
| Msa0464980 | Msa1208840 | -0.803322 | 3.684414e-49 | -8.615850e-47 |
| Msa0467890 | Msa1208840 | -0.812749 | 3.624985e-51 | -8.615850e-47 |
| Msa0467970 | Msa1208840 | -0.821971 | 3.040363e-53 | -8.615850e-47 |
| Msa0480540 | Msa1208840 | 0.836070 | 1.160420e-56 | -8.615850e-47 |
| Msa0480550 | Msa1208840 | 0.828898 | 6.957348e-55 | -8.615850e-47 |
| Msa1023430 | Msa1208840 | 0.811635 | 6.342862e-51 | -8.615850e-47 |
| Msa1030210 | Msa1208840 | 0.827868 | 1.233424e-54 | -8.615850e-47 |
| Msa1051410 | Msa1208840 | -0.804507 | 2.089937e-49 | -8.615850e-47 |
| Msa1061840 | Msa1208840 | 0.812697 | 3.721938e-51 | -8.615850e-47 |
| Msa1064240 | Msa1208840 | 0.817726 | 2.839205e-52 | -8.615850e-47 |
| Msa1069250 | Msa1208840 | 0.812469 | 4.173388e-51 | -8.615850e-47 |
| Msa1076120 | Msa1208840 | -0.800062 | 1.718481e-48 | -8.615850e-47 |
| Msa0270230 | Msa1208840 | -0.801549 | 8.545959e-49 | -8.615850e-47 |
| Msa0271700 | Msa1208840 | 0.829948 | 3.868753e-55 | -8.615850e-47 |
| Msa0271720 | Msa1208840 | 0.823247 | 1.535204e-53 | -8.615850e-47 |
| Msa0307820 | Msa1208840 | -0.806394 | 8.404422e-50 | -8.615850e-47 |
| Msa0310270 | Msa1208840 | -0.800357 | 1.496877e-48 | -8.615850e-47 |
| Msa0314240 | Msa1208840 | 0.800765 | 1.235948e-48 | -8.615850e-47 |
| Msa1107510 | Msa1208840 | 0.817451 | 3.276095e-52 | -8.615850e-47 |
| Msa1137750 | Msa1208840 | 0.819026 | 1.441407e-52 | -8.615850e-47 |
| Msa1151070 | Msa1208840 | 0.808748 | 2.659010e-50 | -8.615850e-47 |
| Msa1154240 | Msa1208840 | 0.808793 | 2.600897e-50 | -8.615850e-47 |
| Msa1208840 | Msa1208920 | 0.942022 | 1.497788e-101 | -8.615850e-47 |
| Msa1208840 | Msa1211610 | 0.837723 | 4.391442e-57 | -8.615850e-47 |
| Msa1208840 | Msa1211930 | -0.821603 | 3.698401e-53 | -8.615850e-47 |
| Msa1208840 | Msa1216820 | -0.821355 | 4.219967e-53 | -8.615850e-47 |
| Msa1208840 | Msa1217020 | -0.808962 | 2.393433e-50 | -8.615850e-47 |
| Msa1208840 | Msa1221520 | 0.816283 | 5.988921e-52 | -8.615850e-47 |
| Msa1208840 | Msa1223560 | 0.835415 | 1.701048e-56 | -8.615850e-47 |
| Msa1208840 | Msa1224510 | 0.814302 | 1.651447e-51 | -8.615850e-47 |
| Msa1208840 | Msa1235960 | -0.801850 | 7.413062e-49 | -8.615850e-47 |
| Msa1208840 | Msa1235990 | -0.802229 | 6.195296e-49 | -8.615850e-47 |
| Msa1208840 | Msa1239190 | 0.823826 | 1.123787e-53 | -8.615850e-47 |
| Msa1208840 | Msa1245890 | 0.950307 | 2.158538e-108 | -8.615850e-47 |
| Msa1208840 | Msa1259030 | 0.949420 | 1.319147e-107 | -8.615850e-47 |
| Msa1208840 | Msa1263500 | 0.824408 | 8.201756e-54 | -8.615850e-47 |
| Msa1208840 | Msa1264940 | 0.817545 | 3.119336e-52 | -8.615850e-47 |
| Msa1208840 | Msa1299480 | 0.835390 | 1.725142e-56 | -8.615850e-47 |
| Msa1208840 | Msa1303150 | 0.821902 | 3.153803e-53 | -8.615850e-47 |
| Msa1208840 | Msa1316090 | -0.805049 | 1.610024e-49 | -8.615850e-47 |
| Msa1208840 | Msa1334000 | 0.824719 | 6.929719e-54 | -8.615850e-47 |
| Msa1208840 | Msa1334690 | -0.806360 | 8.544294e-50 | -8.615850e-47 |
| Msa1208840 | Msa1350130 | -0.804146 | 2.485287e-49 | -8.615850e-47 |
| Msa1208840 | Msa1377050 | 0.806423 | 8.287058e-50 | -8.615850e-47 |
| Msa1208840 | Msa1386820 | -0.810940 | 8.975699e-51 | -8.615850e-47 |
| Msa1208840 | Msa1387610 | 0.830326 | 3.127291e-55 | -8.615850e-47 |
| Msa1208840 | Msa1388010 | -0.806915 | 6.522515e-50 | -8.615850e-47 |
| Msa1208840 | Msa1390200 | 0.812536 | 4.035235e-51 | -8.615850e-47 |
| Msa1208840 | Msa1400830 | -0.802842 | 4.630305e-49 | -8.615850e-47 |
| Msa1208840 | Msa1403590 | -0.807620 | 4.623407e-50 | -8.615850e-47 |
| Msa1208840 | Msa1407040 | 0.810051 | 1.396805e-50 | -8.615850e-47 |
| Msa1208840 | Msa1419200 | 0.958657 | 1.368478e-116 | -8.615850e-47 |
| Msa1208840 | Msa1419210 | 0.819023 | 1.443669e-52 | -8.615850e-47 |
| Msa1208840 | Msa1434860 | -0.803593 | 3.237763e-49 | -8.615850e-47 |
| Msa1208840 | Msa1438160 | 0.809063 | 2.277461e-50 | -8.615850e-47 |
| Msa1208840 | Msa1443280 | -0.806374 | 8.487034e-50 | -8.615850e-47 |
| Msa1208840 | Msa1449470 | 0.836522 | 8.910000e-57 | -8.615850e-47 |
| Msa1208840 | Msa1459920 | 0.812982 | 3.223580e-51 | -8.615850e-47 |
| Msa1208840 | Msa1459930 | 0.854879 | 9.169588e-62 | -8.615850e-47 |
| Msa0500910 | Msa1208840 | 0.807121 | 5.900328e-50 | -8.615850e-47 |
| Msa0509530 | Msa1208840 | -0.827849 | 1.246685e-54 | -8.615850e-47 |
| Msa0514280 | Msa1208840 | -0.830041 | 3.671374e-55 | -8.615850e-47 |
| Msa0527420 | Msa1208840 | -0.818226 | 2.188843e-52 | -8.615850e-47 |
| Msa0539030 | Msa1208840 | 0.803320 | 3.688607e-49 | -8.615850e-47 |
| Msa0550980 | Msa1208840 | -0.802400 | 5.712085e-49 | -8.615850e-47 |
| Msa0554770 | Msa1208840 | -0.804763 | 1.847978e-49 | -8.615850e-47 |
| Msa0555210 | Msa1208840 | -0.800624 | 1.320725e-48 | -8.615850e-47 |
| Msa0565120 | Msa1208840 | 0.864709 | 1.000253e-64 | -8.615850e-47 |
| Msa0572700 | Msa1208840 | 0.811716 | 6.090311e-51 | -8.615850e-47 |
| Msa0578770 | Msa1208840 | -0.800738 | 1.252145e-48 | -8.615850e-47 |
| Msa0580840 | Msa1208840 | 0.818436 | 1.961788e-52 | -8.615850e-47 |
| Msa0588040 | Msa1208840 | 0.804310 | 2.297324e-49 | -8.615850e-47 |
| Msa0594250 | Msa1208840 | 0.815058 | 1.122681e-51 | -8.615850e-47 |
| Msa0848020 | Msa1208840 | 0.805406 | 1.355660e-49 | -8.615850e-47 |
| Msa0856790 | Msa1208840 | -0.828606 | 8.190305e-55 | -8.615850e-47 |
| Msa0865810 | Msa1208840 | 0.800831 | 1.198125e-48 | -8.615850e-47 |
| Msa0865820 | Msa1208840 | 0.819227 | 1.297215e-52 | -8.615850e-47 |
| Msa0865830 | Msa1208840 | 0.841435 | 4.761462e-58 | -8.615850e-47 |
| Msa0866150 | Msa1208840 | -0.800457 | 1.428465e-48 | -8.615850e-47 |
| Msa0874750 | Msa1208840 | 0.825825 | 3.794531e-54 | -8.615850e-47 |
| Msa0879940 | Msa1208840 | -0.835851 | 1.318866e-56 | -8.615850e-47 |
| Msa0936680 | Msa1208840 | 0.802575 | 5.256685e-49 | -8.615850e-47 |
| Msa0966580 | Msa1208840 | 0.800034 | 1.741507e-48 | -8.615850e-47 |
| Msa0976400 | Msa1208840 | 0.823709 | 1.196859e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208840 | MtrunA17_Chr4g0058311 | 97.573 | 206 | 5 | 0 | 1 | 206 | 1 | 206 | 3.39e-152 | 420 |
| Msa1208840 | MtrunA17_Chr4g0058331 | 97.087 | 206 | 6 | 0 | 1 | 206 | 1 | 206 | 4.26e-152 | 419 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208840 | AT5G50200.1 | 51.196 | 209 | 91 | 5 | 1 | 202 | 1 | 205 | 1.88e-65 | 201 |
| Msa1208840 | AT5G50200.3 | 51.196 | 209 | 91 | 5 | 1 | 202 | 1 | 205 | 1.88e-65 | 201 |
| Msa1208840 | AT5G50200.2 | 51.196 | 209 | 91 | 5 | 1 | 202 | 1 | 205 | 1.88e-65 | 201 |
| Msa1208840 | AT4G24715.1 | 49.758 | 207 | 96 | 5 | 1 | 202 | 23 | 226 | 1.12e-63 | 197 |
Find 62 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAGCACAACTTCAGCTTTA+TGG | 0.134503 | 8_1:+67151212 | None:intergenic |
| ATCTACGCAGTTCTGTTATC+TGG | 0.302271 | 8_1:-67151306 | Msa1208840:intron |
| TAAATGAATGTCATAGAAAT+AGG | 0.311940 | 8_1:-67150589 | Msa1208840:three_prime_UTR |
| CTATAGCTCCTATGACTATA+TGG | 0.312141 | 8_1:-67150668 | Msa1208840:three_prime_UTR |
| TTATGCCTTATATATGTTGT+AGG | 0.313435 | 8_1:-67150754 | Msa1208840:three_prime_UTR |
| AGAGAAAAGCCAATTGGAAT+TGG | 0.326415 | 8_1:+67152033 | None:intergenic |
| ACTTACCGTGTCCCTGCTTA+GGG | 0.336802 | 8_1:+67151857 | None:intergenic |
| CTACAATGCTTCCAACAAAA+TGG | 0.342701 | 8_1:-67151097 | Msa1208840:CDS |
| TACTTACCGTGTCCCTGCTT+AGG | 0.375300 | 8_1:+67151856 | None:intergenic |
| TGTTTAGCTGAACTTTGTTA+TGG | 0.379387 | 8_1:-67151928 | Msa1208840:CDS |
| ACTGAATTCAATTACTGCTT+TGG | 0.387524 | 8_1:+67150817 | None:intergenic |
| CCAGGCCTACAACATATATA+AGG | 0.400830 | 8_1:+67150749 | None:intergenic |
| AACGATAAGGAAGTGGCTTA+TGG | 0.411170 | 8_1:-67150997 | Msa1208840:CDS |
| TAGGGGAAGCTGTGACTTCA+AGG | 0.413086 | 8_1:+67151875 | None:intergenic |
| TGCATTTGATTCCAACGATA+AGG | 0.421816 | 8_1:-67151010 | Msa1208840:CDS |
| AATATCATTCCAATTCCAAT+TGG | 0.435193 | 8_1:-67152042 | Msa1208840:five_prime_UTR |
| CAGTGACATAGGAAACTTCA+TGG | 0.450404 | 8_1:-67150798 | Msa1208840:three_prime_UTR |
| AGTGAAAACCATATAGTCAT+AGG | 0.457048 | 8_1:+67150660 | None:intergenic |
| GCTTTCTCAGTTGTGTCCCT+AGG | 0.459425 | 8_1:-67150877 | Msa1208840:CDS |
| AGTCACAGCTTCCCCTAAGC+AGG | 0.463378 | 8_1:-67151869 | Msa1208840:CDS |
| CCTTATATATGTTGTAGGCC+TGG | 0.464256 | 8_1:-67150749 | Msa1208840:three_prime_UTR |
| GACTTCAGAGAAAAGCCAAT+TGG | 0.464343 | 8_1:+67152027 | None:intergenic |
| GGTACTCTTACCCGCGTTCG+TGG | 0.474972 | 8_1:+67150969 | None:intergenic |
| AAAGAAAAGTCAACTGTGAA+AGG | 0.477653 | 8_1:+67151999 | None:intergenic |
| AGCTGAACTTTGTTATGGAA+AGG | 0.496120 | 8_1:-67151923 | Msa1208840:CDS |
| ATAAGCCACTTCCTTATCGT+TGG | 0.499427 | 8_1:+67150999 | None:intergenic |
| GTAATTGAATTCAGTGACAT+AGG | 0.512101 | 8_1:-67150809 | Msa1208840:exon |
| AGACCGAGGATGAACTCTCT+AGG | 0.513840 | 8_1:-67151155 | Msa1208840:CDS |
| TATGATGAGTCTGTTCCAGC+TGG | 0.517572 | 8_1:+67151240 | None:intergenic |
| TGATTCCAACGATAAGGAAG+TGG | 0.521314 | 8_1:-67151004 | Msa1208840:CDS |
| CTAAACAAGACCTTCCCAGC+TGG | 0.523958 | 8_1:-67151255 | Msa1208840:CDS |
| GTTGGAAGCATTGTAGGGCA+TGG | 0.526614 | 8_1:+67151104 | None:intergenic |
| ATGTCATAGAAATAGGAGTC+AGG | 0.533633 | 8_1:-67150582 | Msa1208840:three_prime_UTR |
| AAGAAAAGTCAACTGTGAAA+GGG | 0.535727 | 8_1:+67152000 | None:intergenic |
| TGAGTCTGTTCCAGCTGGGA+AGG | 0.539300 | 8_1:+67151245 | None:intergenic |
| TGCGTTGATCTCAAACAAGT+TGG | 0.540469 | 8_1:+67150948 | None:intergenic |
| GTCCCTAGAGAGTTCATCCT+CGG | 0.558273 | 8_1:+67151152 | None:intergenic |
| TAGACAAAATCAGTGGAACA+TGG | 0.559795 | 8_1:-67151281 | Msa1208840:CDS |
| GACCGAGGATGAACTCTCTA+GGG | 0.561011 | 8_1:-67151154 | Msa1208840:CDS |
| AGGGGAAGCTGTGACTTCAA+GGG | 0.577454 | 8_1:+67151876 | None:intergenic |
| ACTGATAATATTATTTAACC+AGG | 0.587057 | 8_1:+67150731 | None:intergenic |
| CAATATAGAAGAACACACCT+AGG | 0.601286 | 8_1:+67150860 | None:intergenic |
| CTTACCGTGTCCCTGCTTAG+GGG | 0.603221 | 8_1:+67151858 | None:intergenic |
| TTTGAGATCAACGCAATCAG+TGG | 0.604199 | 8_1:-67150940 | Msa1208840:CDS |
| AGACAAAATCAGTGGAACAT+GGG | 0.618150 | 8_1:-67151280 | Msa1208840:CDS |
| ATCGTTGGAATCAAATGCAT+AGG | 0.623735 | 8_1:+67151014 | None:intergenic |
| GTCACAGCTTCCCCTAAGCA+GGG | 0.629784 | 8_1:-67151868 | Msa1208840:CDS |
| TATGGCCAAACCACGAACGC+GGG | 0.634750 | 8_1:-67150979 | Msa1208840:CDS |
| TTATGGCCAAACCACGAACG+CGG | 0.634987 | 8_1:-67150980 | Msa1208840:CDS |
| AAATGGTTCAAACCTTCGAG+TGG | 0.645946 | 8_1:-67151080 | Msa1208840:CDS |
| GCGCTGAATCAACCACTCGA+AGG | 0.649799 | 8_1:+67151068 | None:intergenic |
| CCTCGGTCTTTCTCCAAGCG+CGG | 0.651070 | 8_1:+67151169 | None:intergenic |
| AATATAGAAGAACACACCTA+GGG | 0.653049 | 8_1:+67150861 | None:intergenic |
| TCTGGAGTAGACAAAATCAG+TGG | 0.660740 | 8_1:-67151288 | Msa1208840:CDS |
| TGAGAAAGCACTGAAGACAA+CGG | 0.661115 | 8_1:+67150891 | None:intergenic |
| GCTTCCCCTAAGCAGGGACA+CGG | 0.672498 | 8_1:-67151862 | Msa1208840:intron |
| CGTACAAAGTACGTTGCCTG+AGG | 0.678441 | 8_1:+67151039 | None:intergenic |
| AGCAGATATCAAGAGTCGCG+TGG | 0.681698 | 8_1:+67150914 | None:intergenic |
| ATGATGAGTCTGTTCCAGCT+GGG | 0.682275 | 8_1:+67151241 | None:intergenic |
| AGATATCAAGAGTCGCGTGG+CGG | 0.700580 | 8_1:+67150917 | None:intergenic |
| CCGCGCTTGGAGAAAGACCG+AGG | 0.703551 | 8_1:-67151169 | Msa1208840:CDS |
| AAAGCTGAAGTTGTGCTACG+CGG | 0.733243 | 8_1:-67151208 | Msa1208840:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTCAAATTCAATAAAAG+AGG | + | chr8_1:67150944-67150963 | None:intergenic | 15.0% |
| !! | GATAAGACATTTATTTATTA+AGG | + | chr8_1:67151150-67151169 | None:intergenic | 15.0% |
| !! | TTATTCAAATTCAATAAAAG+AGG | + | chr8_1:67150944-67150963 | None:intergenic | 15.0% |
| !! | GATAAGACATTTATTTATTA+AGG | + | chr8_1:67151150-67151169 | None:intergenic | 15.0% |
| !!! | GAACATTTTTCAAGAAAATT+TGG | - | chr8_1:67150980-67150999 | Msa1208840:CDS | 20.0% |
| !! | TGTTCTTCTATATTGAAAAA+AGG | - | chr8_1:67151714-67151733 | Msa1208840:intron | 20.0% |
| !! | TTCTATATTGAAAAAAGGAA+GGG | - | chr8_1:67151719-67151738 | Msa1208840:intron | 20.0% |
| !! | ACTGATAATATTATTTAACC+AGG | + | chr8_1:67151838-67151857 | None:intergenic | 20.0% |
| !! | CATGAAATATGAAAAACTTA+GGG | + | chr8_1:67151872-67151891 | None:intergenic | 20.0% |
| !! | TAAATGAATGTCATAGAAAT+AGG | - | chr8_1:67151977-67151996 | Msa1208840:exon | 20.0% |
| !!! | GAACATTTTTCAAGAAAATT+TGG | - | chr8_1:67150980-67150999 | Msa1208840:CDS | 20.0% |
| !! | TGTTCTTCTATATTGAAAAA+AGG | - | chr8_1:67151714-67151733 | Msa1208840:intron | 20.0% |
| !! | TTCTATATTGAAAAAAGGAA+GGG | - | chr8_1:67151719-67151738 | Msa1208840:intron | 20.0% |
| !! | ACTGATAATATTATTTAACC+AGG | + | chr8_1:67151838-67151857 | None:intergenic | 20.0% |
| !! | CATGAAATATGAAAAACTTA+GGG | + | chr8_1:67151872-67151891 | None:intergenic | 20.0% |
| !! | TAAATGAATGTCATAGAAAT+AGG | - | chr8_1:67151977-67151996 | Msa1208840:exon | 20.0% |
| ! | AATATCATTCCAATTCCAAT+TGG | - | chr8_1:67150524-67150543 | Msa1208840:three_prime_UTR | 25.0% |
| !!! | TTGACTTTTCTTTAGAACTA+TGG | - | chr8_1:67150577-67150596 | Msa1208840:three_prime_UTR | 25.0% |
| ! | ATAATCACATAAATCAAGGT+TGG | + | chr8_1:67150914-67150933 | None:intergenic | 25.0% |
| ! | GAACATAATCACATAAATCA+AGG | + | chr8_1:67150918-67150937 | None:intergenic | 25.0% |
| ! | TCAAATTCAATAAAAGAGGA+AGG | + | chr8_1:67150940-67150959 | None:intergenic | 25.0% |
| ! | TTCTTGAAAAATGTTCATAC+TGG | + | chr8_1:67150976-67150995 | None:intergenic | 25.0% |
| ! | CTTAATAAATAGTAACACAC+CGG | + | chr8_1:67151022-67151041 | None:intergenic | 25.0% |
| ! | TACATTACAAATGATCACAA+AGG | - | chr8_1:67151074-67151093 | Msa1208840:CDS | 25.0% |
| ! | CAAGTATGCAATCATAATAT+AGG | + | chr8_1:67151172-67151191 | None:intergenic | 25.0% |
| !! | AAGCTGATTAAACTCAATTT+TGG | - | chr8_1:67151229-67151248 | Msa1208840:CDS | 25.0% |
| ! | CTTCTATATTGAAAAAAGGA+AGG | - | chr8_1:67151718-67151737 | Msa1208840:intron | 25.0% |
| ! | TTATGCCTTATATATGTTGT+AGG | - | chr8_1:67151812-67151831 | Msa1208840:intron | 25.0% |
| ! | CCATGAAATATGAAAAACTT+AGG | + | chr8_1:67151873-67151892 | None:intergenic | 25.0% |
| !! | CCTAAGTTTTTCATATTTCA+TGG | - | chr8_1:67151870-67151889 | Msa1208840:CDS | 25.0% |
| !! | AGTTTTTCATATTTCATGGA+TGG | - | chr8_1:67151874-67151893 | Msa1208840:CDS | 25.0% |
| ! | AATATCATTCCAATTCCAAT+TGG | - | chr8_1:67150524-67150543 | Msa1208840:three_prime_UTR | 25.0% |
| !!! | TTGACTTTTCTTTAGAACTA+TGG | - | chr8_1:67150577-67150596 | Msa1208840:three_prime_UTR | 25.0% |
| ! | ATAATCACATAAATCAAGGT+TGG | + | chr8_1:67150914-67150933 | None:intergenic | 25.0% |
| ! | GAACATAATCACATAAATCA+AGG | + | chr8_1:67150918-67150937 | None:intergenic | 25.0% |
| ! | TCAAATTCAATAAAAGAGGA+AGG | + | chr8_1:67150940-67150959 | None:intergenic | 25.0% |
| ! | TTCTTGAAAAATGTTCATAC+TGG | + | chr8_1:67150976-67150995 | None:intergenic | 25.0% |
| ! | CTTAATAAATAGTAACACAC+CGG | + | chr8_1:67151022-67151041 | None:intergenic | 25.0% |
| ! | TACATTACAAATGATCACAA+AGG | - | chr8_1:67151074-67151093 | Msa1208840:CDS | 25.0% |
| ! | CAAGTATGCAATCATAATAT+AGG | + | chr8_1:67151172-67151191 | None:intergenic | 25.0% |
| !! | AAGCTGATTAAACTCAATTT+TGG | - | chr8_1:67151229-67151248 | Msa1208840:CDS | 25.0% |
| ! | CTTCTATATTGAAAAAAGGA+AGG | - | chr8_1:67151718-67151737 | Msa1208840:intron | 25.0% |
| ! | TTATGCCTTATATATGTTGT+AGG | - | chr8_1:67151812-67151831 | Msa1208840:intron | 25.0% |
| ! | CCATGAAATATGAAAAACTT+AGG | + | chr8_1:67151873-67151892 | None:intergenic | 25.0% |
| !! | CCTAAGTTTTTCATATTTCA+TGG | - | chr8_1:67151870-67151889 | Msa1208840:CDS | 25.0% |
| !! | AGTTTTTCATATTTCATGGA+TGG | - | chr8_1:67151874-67151893 | Msa1208840:CDS | 25.0% |
| AAGAAAAGTCAACTGTGAAA+GGG | + | chr8_1:67150569-67150588 | None:intergenic | 30.0% | |
| AAAGAAAAGTCAACTGTGAA+AGG | + | chr8_1:67150570-67150589 | None:intergenic | 30.0% | |
| TGTTTAGCTGAACTTTGTTA+TGG | - | chr8_1:67150638-67150657 | Msa1208840:three_prime_UTR | 30.0% | |
| !!! | TTTTTCAAGAAAATTTGGCC+AGG | - | chr8_1:67150985-67151004 | Msa1208840:CDS | 30.0% |
| ! | CGGTGTGTTACTATTTATTA+AGG | - | chr8_1:67151020-67151039 | Msa1208840:CDS | 30.0% |
| ATTGAGTTTAATCAGCTTGA+AGG | + | chr8_1:67151227-67151246 | None:intergenic | 30.0% | |
| !!! | ATTTTGTTGGAAGCATTGTA+GGG | + | chr8_1:67151470-67151489 | None:intergenic | 30.0% |
| AATATAGAAGAACACACCTA+GGG | + | chr8_1:67151708-67151727 | None:intergenic | 30.0% | |
| ACTGAATTCAATTACTGCTT+TGG | + | chr8_1:67151752-67151771 | None:intergenic | 30.0% | |
| GTAATTGAATTCAGTGACAT+AGG | - | chr8_1:67151757-67151776 | Msa1208840:intron | 30.0% | |
| AGTGAAAACCATATAGTCAT+AGG | + | chr8_1:67151909-67151928 | None:intergenic | 30.0% | |
| AAGAAAAGTCAACTGTGAAA+GGG | + | chr8_1:67150569-67150588 | None:intergenic | 30.0% | |
| AAAGAAAAGTCAACTGTGAA+AGG | + | chr8_1:67150570-67150589 | None:intergenic | 30.0% | |
| TGTTTAGCTGAACTTTGTTA+TGG | - | chr8_1:67150638-67150657 | Msa1208840:three_prime_UTR | 30.0% | |
| !!! | TTTTTCAAGAAAATTTGGCC+AGG | - | chr8_1:67150985-67151004 | Msa1208840:CDS | 30.0% |
| ! | CGGTGTGTTACTATTTATTA+AGG | - | chr8_1:67151020-67151039 | Msa1208840:CDS | 30.0% |
| ATTGAGTTTAATCAGCTTGA+AGG | + | chr8_1:67151227-67151246 | None:intergenic | 30.0% | |
| !!! | ATTTTGTTGGAAGCATTGTA+GGG | + | chr8_1:67151470-67151489 | None:intergenic | 30.0% |
| AATATAGAAGAACACACCTA+GGG | + | chr8_1:67151708-67151727 | None:intergenic | 30.0% | |
| ACTGAATTCAATTACTGCTT+TGG | + | chr8_1:67151752-67151771 | None:intergenic | 30.0% | |
| GTAATTGAATTCAGTGACAT+AGG | - | chr8_1:67151757-67151776 | Msa1208840:intron | 30.0% | |
| AGTGAAAACCATATAGTCAT+AGG | + | chr8_1:67151909-67151928 | None:intergenic | 30.0% | |
| AGAGAAAAGCCAATTGGAAT+TGG | + | chr8_1:67150536-67150555 | None:intergenic | 35.0% | |
| ! | AGCTGAACTTTGTTATGGAA+AGG | - | chr8_1:67150643-67150662 | Msa1208840:three_prime_UTR | 35.0% |
| GAAAATTTGGCCAGGTTTAA+TGG | - | chr8_1:67150993-67151012 | Msa1208840:CDS | 35.0% | |
| TAGACAAAATCAGTGGAACA+TGG | - | chr8_1:67151285-67151304 | Msa1208840:CDS | 35.0% | |
| AGACAAAATCAGTGGAACAT+GGG | - | chr8_1:67151286-67151305 | Msa1208840:CDS | 35.0% | |
| !!! | CATTTTGTTGGAAGCATTGT+AGG | + | chr8_1:67151471-67151490 | None:intergenic | 35.0% |
| CTACAATGCTTCCAACAAAA+TGG | - | chr8_1:67151469-67151488 | Msa1208840:intron | 35.0% | |
| ! | GAAGGTTTGAACCATTTTGT+TGG | + | chr8_1:67151483-67151502 | None:intergenic | 35.0% |
| ATCGTTGGAATCAAATGCAT+AGG | + | chr8_1:67151555-67151574 | None:intergenic | 35.0% | |
| TGCATTTGATTCCAACGATA+AGG | - | chr8_1:67151556-67151575 | Msa1208840:intron | 35.0% | |
| CAATATAGAAGAACACACCT+AGG | + | chr8_1:67151709-67151728 | None:intergenic | 35.0% | |
| CTATAGCTCCTATGACTATA+TGG | - | chr8_1:67151898-67151917 | Msa1208840:CDS | 35.0% | |
| ! | ACTATATGGTTTTCACTCAC+TGG | - | chr8_1:67151912-67151931 | Msa1208840:CDS | 35.0% |
| ATGTCATAGAAATAGGAGTC+AGG | - | chr8_1:67151984-67152003 | Msa1208840:exon | 35.0% | |
| AGAGAAAAGCCAATTGGAAT+TGG | + | chr8_1:67150536-67150555 | None:intergenic | 35.0% | |
| ! | AGCTGAACTTTGTTATGGAA+AGG | - | chr8_1:67150643-67150662 | Msa1208840:three_prime_UTR | 35.0% |
| GAAAATTTGGCCAGGTTTAA+TGG | - | chr8_1:67150993-67151012 | Msa1208840:CDS | 35.0% | |
| TAGACAAAATCAGTGGAACA+TGG | - | chr8_1:67151285-67151304 | Msa1208840:CDS | 35.0% | |
| AGACAAAATCAGTGGAACAT+GGG | - | chr8_1:67151286-67151305 | Msa1208840:CDS | 35.0% | |
| !!! | CATTTTGTTGGAAGCATTGT+AGG | + | chr8_1:67151471-67151490 | None:intergenic | 35.0% |
| CTACAATGCTTCCAACAAAA+TGG | - | chr8_1:67151469-67151488 | Msa1208840:intron | 35.0% | |
| ! | GAAGGTTTGAACCATTTTGT+TGG | + | chr8_1:67151483-67151502 | None:intergenic | 35.0% |
| ATCGTTGGAATCAAATGCAT+AGG | + | chr8_1:67151555-67151574 | None:intergenic | 35.0% | |
| TGCATTTGATTCCAACGATA+AGG | - | chr8_1:67151556-67151575 | Msa1208840:intron | 35.0% | |
| CAATATAGAAGAACACACCT+AGG | + | chr8_1:67151709-67151728 | None:intergenic | 35.0% | |
| CTATAGCTCCTATGACTATA+TGG | - | chr8_1:67151898-67151917 | Msa1208840:CDS | 35.0% | |
| ! | ACTATATGGTTTTCACTCAC+TGG | - | chr8_1:67151912-67151931 | Msa1208840:CDS | 35.0% |
| ATGTCATAGAAATAGGAGTC+AGG | - | chr8_1:67151984-67152003 | Msa1208840:exon | 35.0% | |
| GACTTCAGAGAAAAGCCAAT+TGG | + | chr8_1:67150542-67150561 | None:intergenic | 40.0% | |
| AAAAATTGCAACGCGACTTG+CGG | + | chr8_1:67151054-67151073 | None:intergenic | 40.0% | |
| ATCTACGCAGTTCTGTTATC+TGG | - | chr8_1:67151260-67151279 | Msa1208840:CDS | 40.0% | |
| ! | TCTGGAGTAGACAAAATCAG+TGG | - | chr8_1:67151278-67151297 | Msa1208840:CDS | 40.0% |
| GTAGCACAACTTCAGCTTTA+TGG | + | chr8_1:67151357-67151376 | None:intergenic | 40.0% | |
| ! | GCATGGCTAACATTTTGTGT+TGG | + | chr8_1:67151448-67151467 | None:intergenic | 40.0% |
| AAATGGTTCAAACCTTCGAG+TGG | - | chr8_1:67151486-67151505 | Msa1208840:intron | 40.0% | |
| TGATTCCAACGATAAGGAAG+TGG | - | chr8_1:67151562-67151581 | Msa1208840:intron | 40.0% | |
| ATAAGCCACTTCCTTATCGT+TGG | + | chr8_1:67151570-67151589 | None:intergenic | 40.0% | |
| AACGATAAGGAAGTGGCTTA+TGG | - | chr8_1:67151569-67151588 | Msa1208840:intron | 40.0% | |
| ! | TGCGTTGATCTCAAACAAGT+TGG | + | chr8_1:67151621-67151640 | None:intergenic | 40.0% |
| ! | TTTGAGATCAACGCAATCAG+TGG | - | chr8_1:67151626-67151645 | Msa1208840:intron | 40.0% |
| !! | TGAGAAAGCACTGAAGACAA+CGG | + | chr8_1:67151678-67151697 | None:intergenic | 40.0% |
| CAGTGACATAGGAAACTTCA+TGG | - | chr8_1:67151768-67151787 | Msa1208840:intron | 40.0% | |
| CCAGGCCTACAACATATATA+AGG | + | chr8_1:67151820-67151839 | None:intergenic | 40.0% | |
| CCTTATATATGTTGTAGGCC+TGG | - | chr8_1:67151817-67151836 | Msa1208840:intron | 40.0% | |
| GACTTCAGAGAAAAGCCAAT+TGG | + | chr8_1:67150542-67150561 | None:intergenic | 40.0% | |
| AAAAATTGCAACGCGACTTG+CGG | + | chr8_1:67151054-67151073 | None:intergenic | 40.0% | |
| ATCTACGCAGTTCTGTTATC+TGG | - | chr8_1:67151260-67151279 | Msa1208840:CDS | 40.0% | |
| ! | TCTGGAGTAGACAAAATCAG+TGG | - | chr8_1:67151278-67151297 | Msa1208840:CDS | 40.0% |
| GTAGCACAACTTCAGCTTTA+TGG | + | chr8_1:67151357-67151376 | None:intergenic | 40.0% | |
| ! | GCATGGCTAACATTTTGTGT+TGG | + | chr8_1:67151448-67151467 | None:intergenic | 40.0% |
| AAATGGTTCAAACCTTCGAG+TGG | - | chr8_1:67151486-67151505 | Msa1208840:intron | 40.0% | |
| TGATTCCAACGATAAGGAAG+TGG | - | chr8_1:67151562-67151581 | Msa1208840:intron | 40.0% | |
| ATAAGCCACTTCCTTATCGT+TGG | + | chr8_1:67151570-67151589 | None:intergenic | 40.0% | |
| AACGATAAGGAAGTGGCTTA+TGG | - | chr8_1:67151569-67151588 | Msa1208840:intron | 40.0% | |
| ! | TGCGTTGATCTCAAACAAGT+TGG | + | chr8_1:67151621-67151640 | None:intergenic | 40.0% |
| ! | TTTGAGATCAACGCAATCAG+TGG | - | chr8_1:67151626-67151645 | Msa1208840:intron | 40.0% |
| !! | TGAGAAAGCACTGAAGACAA+CGG | + | chr8_1:67151678-67151697 | None:intergenic | 40.0% |
| CAGTGACATAGGAAACTTCA+TGG | - | chr8_1:67151768-67151787 | Msa1208840:intron | 40.0% | |
| CCAGGCCTACAACATATATA+AGG | + | chr8_1:67151820-67151839 | None:intergenic | 40.0% | |
| CCTTATATATGTTGTAGGCC+TGG | - | chr8_1:67151817-67151836 | Msa1208840:intron | 40.0% | |
| ATGATGAGTCTGTTCCAGCT+GGG | + | chr8_1:67151328-67151347 | None:intergenic | 45.0% | |
| TATGATGAGTCTGTTCCAGC+TGG | + | chr8_1:67151329-67151348 | None:intergenic | 45.0% | |
| AAAGCTGAAGTTGTGCTACG+CGG | - | chr8_1:67151358-67151377 | Msa1208840:intron | 45.0% | |
| ATGATGAGTCTGTTCCAGCT+GGG | + | chr8_1:67151328-67151347 | None:intergenic | 45.0% | |
| TATGATGAGTCTGTTCCAGC+TGG | + | chr8_1:67151329-67151348 | None:intergenic | 45.0% | |
| AAAGCTGAAGTTGTGCTACG+CGG | - | chr8_1:67151358-67151377 | Msa1208840:intron | 45.0% | |
| AGGGGAAGCTGTGACTTCAA+GGG | + | chr8_1:67150693-67150712 | None:intergenic | 50.0% | |
| TAGGGGAAGCTGTGACTTCA+AGG | + | chr8_1:67150694-67150713 | None:intergenic | 50.0% | |
| ACTTACCGTGTCCCTGCTTA+GGG | + | chr8_1:67150712-67150731 | None:intergenic | 50.0% | |
| TACTTACCGTGTCCCTGCTT+AGG | + | chr8_1:67150713-67150732 | None:intergenic | 50.0% | |
| TGGCCAGGTTTAATGGAGTC+CGG | - | chr8_1:67151000-67151019 | Msa1208840:CDS | 50.0% | |
| ACACCGGACTCCATTAAACC+TGG | + | chr8_1:67151006-67151025 | None:intergenic | 50.0% | |
| CTAAACAAGACCTTCCCAGC+TGG | - | chr8_1:67151311-67151330 | Msa1208840:intron | 50.0% | |
| !!! | AGCGCGGTCTTTTTGGCTTA+TGG | + | chr8_1:67151384-67151403 | None:intergenic | 50.0% |
| TAAGCCAAAAAGACCGCGCT+TGG | - | chr8_1:67151384-67151403 | Msa1208840:intron | 50.0% | |
| ! | TTCTCCAAGCGCGGTCTTTT+TGG | + | chr8_1:67151391-67151410 | None:intergenic | 50.0% |
| AGACCGAGGATGAACTCTCT+AGG | - | chr8_1:67151411-67151430 | Msa1208840:intron | 50.0% | |
| GACCGAGGATGAACTCTCTA+GGG | - | chr8_1:67151412-67151431 | Msa1208840:intron | 50.0% | |
| GTCCCTAGAGAGTTCATCCT+CGG | + | chr8_1:67151417-67151436 | None:intergenic | 50.0% | |
| !! | GTTGGAAGCATTGTAGGGCA+TGG | + | chr8_1:67151465-67151484 | None:intergenic | 50.0% |
| CGTACAAAGTACGTTGCCTG+AGG | + | chr8_1:67151530-67151549 | None:intergenic | 50.0% | |
| TTATGGCCAAACCACGAACG+CGG | - | chr8_1:67151586-67151605 | Msa1208840:intron | 50.0% | |
| AGATATCAAGAGTCGCGTGG+CGG | + | chr8_1:67151652-67151671 | None:intergenic | 50.0% | |
| AGCAGATATCAAGAGTCGCG+TGG | + | chr8_1:67151655-67151674 | None:intergenic | 50.0% | |
| GCTTTCTCAGTTGTGTCCCT+AGG | - | chr8_1:67151689-67151708 | Msa1208840:intron | 50.0% | |
| AGGGGAAGCTGTGACTTCAA+GGG | + | chr8_1:67150693-67150712 | None:intergenic | 50.0% | |
| TAGGGGAAGCTGTGACTTCA+AGG | + | chr8_1:67150694-67150713 | None:intergenic | 50.0% | |
| ACTTACCGTGTCCCTGCTTA+GGG | + | chr8_1:67150712-67150731 | None:intergenic | 50.0% | |
| TACTTACCGTGTCCCTGCTT+AGG | + | chr8_1:67150713-67150732 | None:intergenic | 50.0% | |
| TGGCCAGGTTTAATGGAGTC+CGG | - | chr8_1:67151000-67151019 | Msa1208840:CDS | 50.0% | |
| ACACCGGACTCCATTAAACC+TGG | + | chr8_1:67151006-67151025 | None:intergenic | 50.0% | |
| CTAAACAAGACCTTCCCAGC+TGG | - | chr8_1:67151311-67151330 | Msa1208840:intron | 50.0% | |
| !!! | AGCGCGGTCTTTTTGGCTTA+TGG | + | chr8_1:67151384-67151403 | None:intergenic | 50.0% |
| TAAGCCAAAAAGACCGCGCT+TGG | - | chr8_1:67151384-67151403 | Msa1208840:intron | 50.0% | |
| ! | TTCTCCAAGCGCGGTCTTTT+TGG | + | chr8_1:67151391-67151410 | None:intergenic | 50.0% |
| AGACCGAGGATGAACTCTCT+AGG | - | chr8_1:67151411-67151430 | Msa1208840:intron | 50.0% | |
| GACCGAGGATGAACTCTCTA+GGG | - | chr8_1:67151412-67151431 | Msa1208840:intron | 50.0% | |
| GTCCCTAGAGAGTTCATCCT+CGG | + | chr8_1:67151417-67151436 | None:intergenic | 50.0% | |
| !! | GTTGGAAGCATTGTAGGGCA+TGG | + | chr8_1:67151465-67151484 | None:intergenic | 50.0% |
| CGTACAAAGTACGTTGCCTG+AGG | + | chr8_1:67151530-67151549 | None:intergenic | 50.0% | |
| TTATGGCCAAACCACGAACG+CGG | - | chr8_1:67151586-67151605 | Msa1208840:intron | 50.0% | |
| AGATATCAAGAGTCGCGTGG+CGG | + | chr8_1:67151652-67151671 | None:intergenic | 50.0% | |
| AGCAGATATCAAGAGTCGCG+TGG | + | chr8_1:67151655-67151674 | None:intergenic | 50.0% | |
| GCTTTCTCAGTTGTGTCCCT+AGG | - | chr8_1:67151689-67151708 | Msa1208840:intron | 50.0% | |
| AGTCACAGCTTCCCCTAAGC+AGG | - | chr8_1:67150697-67150716 | Msa1208840:three_prime_UTR | 55.0% | |
| GTCACAGCTTCCCCTAAGCA+GGG | - | chr8_1:67150698-67150717 | Msa1208840:three_prime_UTR | 55.0% | |
| CTTACCGTGTCCCTGCTTAG+GGG | + | chr8_1:67150711-67150730 | None:intergenic | 55.0% | |
| TGAGTCTGTTCCAGCTGGGA+AGG | + | chr8_1:67151324-67151343 | None:intergenic | 55.0% | |
| GCGCTGAATCAACCACTCGA+AGG | + | chr8_1:67151501-67151520 | None:intergenic | 55.0% | |
| TATGGCCAAACCACGAACGC+GGG | - | chr8_1:67151587-67151606 | Msa1208840:intron | 55.0% | |
| TCTTACCCGCGTTCGTGGTT+TGG | + | chr8_1:67151595-67151614 | None:intergenic | 55.0% | |
| AGTCACAGCTTCCCCTAAGC+AGG | - | chr8_1:67150697-67150716 | Msa1208840:three_prime_UTR | 55.0% | |
| GTCACAGCTTCCCCTAAGCA+GGG | - | chr8_1:67150698-67150717 | Msa1208840:three_prime_UTR | 55.0% | |
| CTTACCGTGTCCCTGCTTAG+GGG | + | chr8_1:67150711-67150730 | None:intergenic | 55.0% | |
| TGAGTCTGTTCCAGCTGGGA+AGG | + | chr8_1:67151324-67151343 | None:intergenic | 55.0% | |
| GCGCTGAATCAACCACTCGA+AGG | + | chr8_1:67151501-67151520 | None:intergenic | 55.0% | |
| TATGGCCAAACCACGAACGC+GGG | - | chr8_1:67151587-67151606 | Msa1208840:intron | 55.0% | |
| TCTTACCCGCGTTCGTGGTT+TGG | + | chr8_1:67151595-67151614 | None:intergenic | 55.0% | |
| GCTTCCCCTAAGCAGGGACA+CGG | - | chr8_1:67150704-67150723 | Msa1208840:three_prime_UTR | 60.0% | |
| CCTCGGTCTTTCTCCAAGCG+CGG | + | chr8_1:67151400-67151419 | None:intergenic | 60.0% | |
| GGTACTCTTACCCGCGTTCG+TGG | + | chr8_1:67151600-67151619 | None:intergenic | 60.0% | |
| GCTTCCCCTAAGCAGGGACA+CGG | - | chr8_1:67150704-67150723 | Msa1208840:three_prime_UTR | 60.0% | |
| CCTCGGTCTTTCTCCAAGCG+CGG | + | chr8_1:67151400-67151419 | None:intergenic | 60.0% | |
| GGTACTCTTACCCGCGTTCG+TGG | + | chr8_1:67151600-67151619 | None:intergenic | 60.0% | |
| CCGCGCTTGGAGAAAGACCG+AGG | - | chr8_1:67151397-67151416 | Msa1208840:intron | 65.0% | |
| GATTCAGCGCGACGTGCCTC+AGG | - | chr8_1:67151511-67151530 | Msa1208840:intron | 65.0% | |
| CCGCGCTTGGAGAAAGACCG+AGG | - | chr8_1:67151397-67151416 | Msa1208840:intron | 65.0% | |
| GATTCAGCGCGACGTGCCTC+AGG | - | chr8_1:67151511-67151530 | Msa1208840:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 67150508 | 67152080 | 67150508 | ID=Msa1208840;Name=Msa1208840 |
| chr8_1 | mRNA | 67150508 | 67152080 | 67150508 | ID=Msa1208840-mRNA-1;Parent=Msa1208840;Name=Msa1208840-mRNA-1;_AED=0.19;_eAED=0.19;_QI=88|1|1|1|1|1|2|320|206 |
| chr8_1 | exon | 67150508 | 67151318 | 67150508 | ID=Msa1208840-mRNA-1:exon:22125;Parent=Msa1208840-mRNA-1 |
| chr8_1 | exon | 67151863 | 67152080 | 67151863 | ID=Msa1208840-mRNA-1:exon:22124;Parent=Msa1208840-mRNA-1 |
| chr8_1 | five_prime_UTR | 67151993 | 67152080 | 67151993 | ID=Msa1208840-mRNA-1:five_prime_utr;Parent=Msa1208840-mRNA-1 |
| chr8_1 | CDS | 67151863 | 67151992 | 67151863 | ID=Msa1208840-mRNA-1:cds;Parent=Msa1208840-mRNA-1 |
| chr8_1 | CDS | 67150828 | 67151318 | 67150828 | ID=Msa1208840-mRNA-1:cds;Parent=Msa1208840-mRNA-1 |
| chr8_1 | three_prime_UTR | 67150508 | 67150827 | 67150508 | ID=Msa1208840-mRNA-1:three_prime_utr;Parent=Msa1208840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
