AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0463580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0463580 MtrunA17_Chr3g0113901 97.468 79 0 1 3 81 757 833 4.54e-48 162
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0463580 AT3G56040.1 62.500 80 28 1 2 81 768 845 8.72e-30 110

Find 257 sgRNAs with CRISPR-Local

Find 606 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTAGCTAGTCCAGCATTTC+TGG 0.108905 3_3:+63056606 None:intergenic
GCAAGTCTCTTTCATTATTA+AGG 0.122176 3_3:-63048630 Msa0463580:three_prime_UTR
ATTTCCTGTAATTATATTAT+TGG 0.163304 3_3:-63048720 Msa0463580:three_prime_UTR
TGGCGACTTACAACAGAAAA+TGG 0.168429 3_3:+63048561 None:intergenic
ATCCTGCTCTTGGTCCTCTT+TGG 0.182867 3_3:-63050729 Msa0463580:five_prime_UTR
GATTGCATTGGAGGAGTAAT+TGG 0.185925 3_3:-63056292 Msa0463580:five_prime_UTR
GGAAATTCTGGTGGTGGTTT+TGG 0.204275 3_3:-63056391 Msa0463580:five_prime_UTR
GATTGCTAAACCTGAATTAA+TGG 0.243046 3_3:+63049018 None:intergenic
TTCTTGTACTTCAAGTTATA+TGG 0.249345 3_3:-63054743 Msa0463580:five_prime_UTR
AGCTACTGATGTTGTCTTAC+AGG 0.251449 3_3:-63049704 Msa0463580:intron
ACGTTGCAGTTATCAGATTA+TGG 0.263325 3_3:-63055306 Msa0463580:intron
CTTCTAGGGTTTGCCAGACC+TGG 0.263501 3_3:-63055033 Msa0463580:intron
CGTTGATGATTCGAAGCTTT+TGG 0.263663 3_3:+63056665 None:intergenic
ATCACTGTTTCCATTAATTC+AGG 0.264551 3_3:-63049028 Msa0463580:three_prime_UTR
GGGCATCGATTCCCAAAATT+TGG 0.269316 3_3:+63055204 None:intergenic
CAGTTATCAGATTATGGTTC+TGG 0.272663 3_3:-63055300 Msa0463580:five_prime_UTR
ATGCATCTCAAGCCGCTCTA+TGG 0.274293 3_3:-63055148 Msa0463580:five_prime_UTR
TACACTGAATTCGACAAGTT+TGG 0.277224 3_3:-63053015 Msa0463580:five_prime_UTR
TAGAGGTTGCAGAGCTCTTT+TGG 0.277245 3_3:-63050182 Msa0463580:five_prime_UTR
AGTGAAAGAAGGCCAAATTT+TGG 0.278373 3_3:-63055216 Msa0463580:five_prime_UTR
TCCTGCTCTTGGTCCTCTTT+GGG 0.282075 3_3:-63050728 Msa0463580:five_prime_UTR
GACAAGTTTGGGATTACTAA+TGG 0.289277 3_3:-63053003 Msa0463580:five_prime_UTR
ACGAACTTGTGAATATTTGA+TGG 0.293728 3_3:+63048589 None:intergenic
TTAGTAGTAGAAATTATTAT+AGG 0.297631 3_3:+63048831 None:intergenic
GATGAGAACTACGTTTATTC+AGG 0.303262 3_3:-63050775 Msa0463580:five_prime_UTR
TTTCCTGTAATTATATTATT+GGG 0.303735 3_3:-63048719 Msa0463580:three_prime_UTR
AGAGAAAACGGTGGTGATTA+TGG 0.310242 3_3:+63056929 None:intergenic
CAAGTCTCTTTCATTATTAA+GGG 0.312635 3_3:-63048629 Msa0463580:three_prime_UTR
CAGCCTCTTGTTCCGGTTGT+CGG 0.319576 3_3:-63054508 Msa0463580:five_prime_UTR
GAGTCGTCCGTGATGGCTTC+TGG 0.322029 3_3:-63056475 Msa0463580:five_prime_UTR
TAACTCAGATCCCTTCGATA+TGG 0.322424 3_3:+63050209 None:intergenic
GACACCTGATGGTGCTCTAT+TGG 0.328369 3_3:-63051095 Msa0463580:five_prime_UTR
ATCCTTCTTCATCCTGCTCT+TGG 0.330716 3_3:-63050739 Msa0463580:five_prime_UTR
GTTAAGAGACCTGGGCTTCC+TGG 0.334728 3_3:+63049143 None:intergenic
TTTGTATTTAACACCATTCC+TGG 0.335076 3_3:+63052287 None:intergenic
CCTGGGTGAAATTTATCCTT+TGG 0.336683 3_3:-63055015 Msa0463580:five_prime_UTR
ATCGACGCTGCGGTTGGATT+CGG 0.338258 3_3:-63056578 Msa0463580:five_prime_UTR
TATTCATCTAGGTGCTATAA+TGG 0.342333 3_3:-63051710 Msa0463580:five_prime_UTR
AGAAATGTCCAGATGGCAAC+TGG 0.346060 3_3:-63053062 Msa0463580:five_prime_UTR
CAACCCAATAATATAATTAC+AGG 0.350203 3_3:+63048716 None:intergenic
GAGACCAGTTTGTATTCTTC+CGG 0.352518 3_3:+63055252 None:intergenic
TATAAGATGTTTGTATTAGC+TGG 0.355473 3_3:+63052365 None:intergenic
CTAATGGATCTCTTCCAAAA+AGG 0.356361 3_3:-63052987 Msa0463580:intron
ACACTGAATTCGACAAGTTT+GGG 0.356446 3_3:-63053014 Msa0463580:five_prime_UTR
GATTCTGGTAATGGAAATTC+TGG 0.364009 3_3:-63056403 Msa0463580:five_prime_UTR
AGGTCTTATAAGAGATCTTC+AGG 0.365034 3_3:-63054898 Msa0463580:intron
ATTTCTACAATCAAGTTTGC+AGG 0.365245 3_3:-63052396 Msa0463580:intron
AGTTCAACCTTTGCGACATT+AGG 0.366641 3_3:-63048790 Msa0463580:three_prime_UTR
TGCGAAACACTCTCTTGGTT+TGG 0.366793 3_3:-63054647 Msa0463580:five_prime_UTR
CTGGGTGAAATTTATCCTTT+GGG 0.366993 3_3:-63055014 Msa0463580:five_prime_UTR
ATTTAAAGTTATTTCACAAC+TGG 0.367767 3_3:+63048506 None:intergenic
ATAAATTATGTAGATCAGTT+TGG 0.370232 3_3:-63052257 Msa0463580:five_prime_UTR
ATCTTCAATTTGTATCCATC+TGG 0.370939 3_3:+63049170 None:intergenic
GAACTTGTCATTATTGCAAC+AGG 0.373163 3_3:+63054704 None:intergenic
ATTTCAATTCATATTCATCT+AGG 0.374107 3_3:-63051721 Msa0463580:five_prime_UTR
ATGATTGAGAAGATGGATTC+TGG 0.376036 3_3:-63056418 Msa0463580:five_prime_UTR
AACAGTGATTCATGTTAAAT+CGG 0.377125 3_3:+63049042 None:intergenic
TTACCATCTGCGGAGCTTGT+TGG 0.380348 3_3:-63052335 Msa0463580:five_prime_UTR
CAAGAGCATGTGTTGTGTTC+GGG 0.388421 3_3:-63056517 Msa0463580:five_prime_UTR
GTTTGGAGGATCATGAAATT+CGG 0.388697 3_3:-63056363 Msa0463580:five_prime_UTR
CACTTCTTCCTCCTCCTTCA+CGG 0.389307 3_3:-63057128 Msa0463580:five_prime_UTR
TCAAGAGCATGTGTTGTGTT+CGG 0.394898 3_3:-63056518 Msa0463580:five_prime_UTR
CCATCTTCTGCACCGACAAC+CGG 0.396774 3_3:+63054496 None:intergenic
GGAACTTATTGTCCAACAAT+TGG 0.403417 3_3:-63055279 Msa0463580:five_prime_UTR
GAGGGAATTGATTGGAGTTA+TGG 0.407417 3_3:-63049805 Msa0463580:CDS
TTTGGAGGATCATGAAATTC+GGG 0.407427 3_3:-63056362 Msa0463580:five_prime_UTR
GTAACCCTCCTGGCCTTAGC+AGG 0.407592 3_3:-63054213 Msa0463580:five_prime_UTR
TGTTGTGTTGTGAGTTAGAA+TGG 0.408933 3_3:+63057010 None:intergenic
CCGGTTGTCGGTGCAGAAGA+TGG 0.414770 3_3:-63054496 Msa0463580:five_prime_UTR
CCGTATTCCCAGTTGCCATC+TGG 0.416223 3_3:+63053054 None:intergenic
ACGGCAGCATTGCAGCAGGC+AGG 0.417616 3_3:+63054943 None:intergenic
GTCACGGAGGGAGGTGAGTC+TGG 0.418145 3_3:+63056714 None:intergenic
CAATAACGACGGACCTGACT+TGG 0.420916 3_3:+63054341 None:intergenic
CCCTGTGCGAAACACTCTCT+TGG 0.421940 3_3:-63054652 Msa0463580:five_prime_UTR
TTGGGAATCGATGCCCCGAC+TGG 0.422601 3_3:-63055197 Msa0463580:five_prime_UTR
GCATCCTGTGACCGTGTCTC+AGG 0.434355 3_3:-63053117 Msa0463580:five_prime_UTR
TTCGCGGCGGAAATTGAATC+CGG 0.435076 3_3:+63056741 None:intergenic
GAATTGGCAGCCTCTTGTTC+CGG 0.436440 3_3:-63054515 Msa0463580:intron
CACTGGGATTACAAGATAGA+AGG 0.441388 3_3:-63048950 Msa0463580:three_prime_UTR
CCAGTTAGATCCGATTGAAA+AGG 0.441754 3_3:-63048996 Msa0463580:three_prime_UTR
TTCTAGGGTTTGCCAGACCT+GGG 0.443387 3_3:-63055032 Msa0463580:intron
GTGCAACTGTGCGCCAAGTC+AGG 0.443469 3_3:-63054354 Msa0463580:intron
TTCAGTCCCTTGAGCAAGCC+TGG 0.446802 3_3:-63054451 Msa0463580:five_prime_UTR
GTCCGTGATGGCTTCTGGTT+CGG 0.447578 3_3:-63056470 Msa0463580:five_prime_UTR
TGCATCTCAAGCCGCTCTAT+GGG 0.456669 3_3:-63055147 Msa0463580:five_prime_UTR
CAGCGTCTCTGGTGGCAGAC+TGG 0.457973 3_3:-63051774 Msa0463580:five_prime_UTR
GTTGCTTTATCATGATCGTT+AGG 0.462504 3_3:-63049119 Msa0463580:exon
GGATAAATTTCACCCAGGTC+TGG 0.462592 3_3:+63055020 None:intergenic
CGGAAATTGAATCCGGGAGG+TGG 0.466176 3_3:+63056748 None:intergenic
CCAGATGGCAACTGGGAATA+CGG 0.467549 3_3:-63053054 Msa0463580:five_prime_UTR
CAGAAAGGTCAAGCCCAGTC+GGG 0.468261 3_3:+63055183 None:intergenic
CAGACATCTGATGTGGTTAG+TGG 0.468491 3_3:+63048892 None:intergenic
TTGTATATAATGAGCGGAGA+AGG 0.469118 3_3:-63051572 Msa0463580:five_prime_UTR
GGCGAAGATGATTGAGAAGA+TGG 0.469555 3_3:-63056425 Msa0463580:five_prime_UTR
TACAGAGTGAGACGTTTCTT+CGG 0.471842 3_3:-63056637 Msa0463580:five_prime_UTR
TCTTCCGGTCAACCAATTGT+TGG 0.474192 3_3:+63055267 None:intergenic
TGGACAGTGGAAGCTGGCAC+TGG 0.475964 3_3:-63048967 Msa0463580:three_prime_UTR
GAGAAGATGGATTCTGGTAA+TGG 0.475984 3_3:-63056412 Msa0463580:five_prime_UTR
ATTGCATTGGAGGAGTAATT+GGG 0.476083 3_3:-63056291 Msa0463580:intron
CCAGAAATGCTGGACTAGCT+AGG 0.479459 3_3:-63056606 Msa0463580:five_prime_UTR
TTGAGCAAGCCTGGTGGTCA+TGG 0.479896 3_3:-63054442 Msa0463580:five_prime_UTR
AGGTTCTATGATTGCATTGG+AGG 0.481250 3_3:-63056301 Msa0463580:five_prime_UTR
CAAAACGGCAGCATTGCAGC+AGG 0.483983 3_3:+63054939 None:intergenic
GGATGAAGAAGGATAAGAAA+TGG 0.486008 3_3:+63050748 None:intergenic
TGTGGGAGGACTTTGTTGGA+AGG 0.487462 3_3:-63054918 Msa0463580:five_prime_UTR
TGTTGAACGAGGGAATTGAT+TGG 0.487686 3_3:-63049813 Msa0463580:CDS
ATGACAAAGGCATCTTCAAA+TGG 0.489205 3_3:-63054399 Msa0463580:five_prime_UTR
GAAGAAGAAGAAGATGAAGA+TGG 0.495913 3_3:+63056826 None:intergenic
GATTAATAAGAATATAAGAT+GGG 0.496064 3_3:+63057036 None:intergenic
GGGATCTGAGTTACAAATAG+AGG 0.499477 3_3:-63050199 Msa0463580:five_prime_UTR
TTTGAAGATGCCTTTGTCAT+GGG 0.499681 3_3:+63054402 None:intergenic
ATCAGTTTGGAAGACATTGT+AGG 0.500085 3_3:-63052244 Msa0463580:intron
GGCGACTTACAACAGAAAAT+GGG 0.502318 3_3:+63048562 None:intergenic
GTTATGGTGGAAATGTGTAT+TGG 0.502486 3_3:-63049789 Msa0463580:CDS
TCCGATTGAAAAGGGTATGA+TGG 0.503234 3_3:-63048987 Msa0463580:three_prime_UTR
AACCGATCCCTGCTAAGGCC+AGG 0.504929 3_3:+63054205 None:intergenic
GAGAGGTTCTATGATTGCAT+TGG 0.505264 3_3:-63056304 Msa0463580:five_prime_UTR
AACGAAAAGAAAAGAGAAAA+CGG 0.505393 3_3:+63056917 None:intergenic
GGTTCCTCCTCCAGAAATGC+TGG 0.506285 3_3:-63056616 Msa0463580:five_prime_UTR
TTGTCCAACAATTGGTTGAC+CGG 0.510009 3_3:-63055271 Msa0463580:five_prime_UTR
ATCACGGACGACTCCATCTC+CGG 0.510882 3_3:+63056484 None:intergenic
CGGTTGTCGGTGCAGAAGAT+GGG 0.511615 3_3:-63054495 Msa0463580:five_prime_UTR
AGGAAGAAGTGCTTATTAGC+CGG 0.512079 3_3:+63057140 None:intergenic
ACAGGGAAGTGATGTGTTTG+TGG 0.514804 3_3:+63054669 None:intergenic
ATTTCTACTACTAAAATGAC+AGG 0.515642 3_3:-63048822 Msa0463580:three_prime_UTR
GATTTAGTTGATCCTAGCAC+TGG 0.516777 3_3:-63054972 Msa0463580:five_prime_UTR
GGTAATGGAAATTCTGGTGG+TGG 0.517348 3_3:-63056397 Msa0463580:five_prime_UTR
ATTTGAAGATGCCTTTGTCA+TGG 0.517965 3_3:+63054401 None:intergenic
AAGTGAAGTGGAGTGAAGCA+TGG 0.519601 3_3:+63056957 None:intergenic
CTCCTGGCCTTAGCAGGGAT+CGG 0.519753 3_3:-63054207 Msa0463580:five_prime_UTR
GACATTCAAACACATGAACT+TGG 0.521993 3_3:+63048541 None:intergenic
TACAAATTGAAGATCATGCC+AGG 0.523183 3_3:-63049161 Msa0463580:CDS
AGAAGGAATTAATGTACTGA+TGG 0.523885 3_3:-63053088 Msa0463580:five_prime_UTR
AACAAAGTCCTCCCACAAAA+CGG 0.525949 3_3:+63054924 None:intergenic
ACACTCTCTTGGTTTGGAAG+AGG 0.526496 3_3:-63054641 Msa0463580:five_prime_UTR
CAGTTAGATCCGATTGAAAA+GGG 0.526731 3_3:-63048995 Msa0463580:three_prime_UTR
GGAAGAAGTGCTTATTAGCC+GGG 0.528463 3_3:+63057141 None:intergenic
AAATTGAATCCGGGAGGTGG+TGG 0.528692 3_3:+63056751 None:intergenic
AGGATATACCGTGAAGGAGG+AGG 0.531064 3_3:+63057120 None:intergenic
CGCAGGCGGCGAGCTTGTCA+CGG 0.531307 3_3:+63056698 None:intergenic
GGGAGAAACTATGCCGGAGA+TGG 0.533169 3_3:-63056497 Msa0463580:five_prime_UTR
ACCAAGAGAGTGTTTCGCAC+AGG 0.533505 3_3:+63054651 None:intergenic
AAGATCATGCCAGGAAGCCC+AGG 0.536968 3_3:-63049152 Msa0463580:CDS
TCCCAAAGAGGACCAAGAGC+AGG 0.537439 3_3:+63050727 None:intergenic
AAAGCAACGGTTAAGAGACC+TGG 0.537538 3_3:+63049134 None:intergenic
ACGTATTTCTACAGAACCAT+TGG 0.538646 3_3:-63056782 Msa0463580:five_prime_UTR
TGTATATAATGAGCGGAGAA+GGG 0.539015 3_3:-63051571 Msa0463580:five_prime_UTR
GCTTGACCTTTCTGAAAGTA+CGG 0.539295 3_3:-63055174 Msa0463580:five_prime_UTR
AGCTACAGATGTAACCCTCC+TGG 0.539348 3_3:-63054223 Msa0463580:five_prime_UTR
TGATTAATAAGAATATAAGA+TGG 0.539626 3_3:+63057035 None:intergenic
CATATGACACCATGACCACC+AGG 0.543397 3_3:+63054433 None:intergenic
GGAATTGATTGGAGTTATGG+TGG 0.547001 3_3:-63049802 Msa0463580:CDS
CACATGCACGAAGTGAAAGA+AGG 0.547067 3_3:-63055227 Msa0463580:five_prime_UTR
ATTGGAAACATGATGTGAAA+AGG 0.548474 3_3:-63049771 Msa0463580:CDS
CAGAAATGCTGGACTAGCTA+GGG 0.548885 3_3:-63056605 Msa0463580:five_prime_UTR
GTATGATGGACAGTGGAAGC+TGG 0.551683 3_3:-63048973 Msa0463580:three_prime_UTR
AGCCGCTCTATGGGGTATAG+AGG 0.552596 3_3:-63055138 Msa0463580:intron
ACTAATATTGTAAAATTGAG+AGG 0.552818 3_3:-63048683 Msa0463580:three_prime_UTR
ATATGTTGATTTACCATCTG+CGG 0.552956 3_3:-63052345 Msa0463580:five_prime_UTR
TACGGTGGTTCCATATCGAA+GGG 0.553092 3_3:-63050219 Msa0463580:five_prime_UTR
TTACGGTGGTTCCATATCGA+AGG 0.553784 3_3:-63050220 Msa0463580:five_prime_UTR
GATGTCTGCTGCGTGAATCA+TGG 0.554272 3_3:-63048877 Msa0463580:three_prime_UTR
GAATTATCACCACCACCTCC+CGG 0.556730 3_3:-63056760 Msa0463580:five_prime_UTR
GGTGAAATTTATCCTTTGGG+AGG 0.556891 3_3:-63055011 Msa0463580:five_prime_UTR
TGGAGACAAGTCTTTACGCC+AGG 0.557037 3_3:-63051517 Msa0463580:intron
GGCTTGCTCAAGGGACTGAA+CGG 0.558446 3_3:+63054454 None:intergenic
ATATCCAATAGAGCACCATC+AGG 0.558512 3_3:+63051091 None:intergenic
CTGGTGGTCATGGTGTCATA+TGG 0.558729 3_3:-63054432 Msa0463580:five_prime_UTR
CATGTATTTGAAGTTCCAGA+TGG 0.559336 3_3:-63049185 Msa0463580:CDS
GACCAAGAGCAGGATGAAGA+AGG 0.559973 3_3:+63050737 None:intergenic
TGTGAATAGTATACCAGGAA+TGG 0.560350 3_3:-63052300 Msa0463580:five_prime_UTR
TCATGGTTCACAGTTGATGT+TGG 0.560747 3_3:-63048860 Msa0463580:three_prime_UTR
TGGGAATCGATGCCCCGACT+GGG 0.560943 3_3:-63055196 Msa0463580:five_prime_UTR
TCAGAAAGGTCAAGCCCAGT+CGG 0.562913 3_3:+63055182 None:intergenic
TTGACCGGAAGAATACAAAC+TGG 0.564865 3_3:-63055256 Msa0463580:five_prime_UTR
GAATAAGTTGTTAGAGACGT+TGG 0.565230 3_3:-63056335 Msa0463580:five_prime_UTR
GCAGGGATCGGTTTGCGTCA+AGG 0.565919 3_3:-63054195 Msa0463580:five_prime_UTR
TGCACCTGAGACACGGTCAC+AGG 0.569781 3_3:+63053113 None:intergenic
CCAAGAGAGTGTTTCGCACA+GGG 0.570420 3_3:+63054652 None:intergenic
GGCGGCGAGCTTGTCACGGA+GGG 0.573784 3_3:+63056702 None:intergenic
TATCAAGAGAAGATGCTATG+AGG 0.574220 3_3:+63057100 None:intergenic
AGGTGAGTCTGGTGATTTCG+CGG 0.574340 3_3:+63056725 None:intergenic
ACGCAAACCGATCCCTGCTA+AGG 0.575284 3_3:+63054200 None:intergenic
TAGTCCAGCATTTCTGGAGG+AGG 0.575790 3_3:+63056612 None:intergenic
AAGAATGTGAATAGTATACC+AGG 0.575840 3_3:-63052305 Msa0463580:five_prime_UTR
TTGAAGTGTTTGGTAGCTGC+GGG 0.576265 3_3:-63056541 Msa0463580:five_prime_UTR
GGCGAGCTTGTCACGGAGGG+AGG 0.576489 3_3:+63056705 None:intergenic
AGGTGCTATAATGGTGTGGA+AGG 0.577188 3_3:-63051701 Msa0463580:intron
ATTAATAAGAATATAAGATG+GGG 0.579122 3_3:+63057037 None:intergenic
TCGCGGCGGAAATTGAATCC+GGG 0.579207 3_3:+63056742 None:intergenic
TGCAGAAGATGGGCAGTGGT+TGG 0.579965 3_3:-63054485 Msa0463580:five_prime_UTR
GTGCCTGTATAACAGAAACT+GGG 0.580176 3_3:-63053144 Msa0463580:intron
CTTCTGTTGCACCTGAGACA+CGG 0.581858 3_3:+63053106 None:intergenic
CATACTCCGTACTTTCAGAA+AGG 0.581877 3_3:+63055168 None:intergenic
TGGAAACTTGCCCATGACAA+AGG 0.584706 3_3:-63054412 Msa0463580:five_prime_UTR
ATGACCACCAGGCTTGCTCA+AGG 0.585469 3_3:+63054444 None:intergenic
GATCGGTTTGCGTCAAGGAA+AGG 0.586389 3_3:-63054190 Msa0463580:intron
ATTGAGAGGAATGCAAGCAA+TGG 0.586548 3_3:-63048669 Msa0463580:three_prime_UTR
AGACGTTGGCGCAAGTTGAG+AGG 0.588652 3_3:-63056321 Msa0463580:five_prime_UTR
GGAGATGGAGTCGTCCGTGA+TGG 0.588965 3_3:-63056482 Msa0463580:five_prime_UTR
TTGGCCTTGCAGTAATGTTG+TGG 0.589720 3_3:-63054247 Msa0463580:intron
CGTGTCTCAGGTGCAACAGA+AGG 0.594843 3_3:-63053105 Msa0463580:five_prime_UTR
GGCAGGCATTCACCAGTGCT+AGG 0.597638 3_3:+63054960 None:intergenic
GCACCGACAACCGGAACAAG+AGG 0.600784 3_3:+63054505 None:intergenic
CACCGAACCAGAAGCCATCA+CGG 0.602688 3_3:+63056468 None:intergenic
ATTATGGTGAAGAAGTGAAG+TGG 0.608533 3_3:+63056945 None:intergenic
GATCCAACAAGCTCCGCAGA+TGG 0.609291 3_3:+63052332 None:intergenic
TGACCACCAGGCTTGCTCAA+GGG 0.609355 3_3:+63054445 None:intergenic
TGTCTGGTGACTTCCCAAAG+AGG 0.610893 3_3:+63050715 None:intergenic
ATCTAGGTGCTATAATGGTG+TGG 0.612874 3_3:-63051705 Msa0463580:five_prime_UTR
ATGTAAATTGCAGAATGTCA+AGG 0.615849 3_3:-63049836 Msa0463580:CDS
AAAACAACCTAATGTCGCAA+AGG 0.616655 3_3:+63048783 None:intergenic
GGACAGTGGAAGCTGGCACT+GGG 0.616854 3_3:-63048966 Msa0463580:three_prime_UTR
GTTGAAGTGTTTGGTAGCTG+CGG 0.617732 3_3:-63056542 Msa0463580:five_prime_UTR
GAATGTCAAGGTGTTGAACG+AGG 0.618719 3_3:-63049824 Msa0463580:CDS
GAAATGTCCAGATGGCAACT+GGG 0.618954 3_3:-63053061 Msa0463580:five_prime_UTR
TAACCCTCCTGGCCTTAGCA+GGG 0.626190 3_3:-63054212 Msa0463580:five_prime_UTR
GGTGGTGGTGATAATTCCAA+TGG 0.626917 3_3:+63056766 None:intergenic
GTGTTCGGGAGAAACTATGC+CGG 0.626957 3_3:-63056503 Msa0463580:five_prime_UTR
TAATTTGCCAGCGTCTCTGG+TGG 0.627326 3_3:-63051782 Msa0463580:intron
TCGGTGCAGAAGATGGGCAG+TGG 0.627663 3_3:-63054489 Msa0463580:five_prime_UTR
GAAAAGGGTATGATGGACAG+TGG 0.627719 3_3:-63048980 Msa0463580:three_prime_UTR
AACTTGTCATTATTGCAACA+GGG 0.628372 3_3:+63054705 None:intergenic
ATGGAGAAGAAATGTCCAGA+TGG 0.629322 3_3:-63053069 Msa0463580:five_prime_UTR
CATTTATTGTATATAATGAG+CGG 0.629480 3_3:-63051578 Msa0463580:five_prime_UTR
ATTTATATGCAGACACCTGA+TGG 0.632909 3_3:-63051106 Msa0463580:intron
AGAAAGGTCAAGCCCAGTCG+GGG 0.637922 3_3:+63055184 None:intergenic
GAGTGTGAATCTAGAAGTGA+AGG 0.638377 3_3:+63056889 None:intergenic
ATGAGGATATACCGTGAAGG+AGG 0.639551 3_3:+63057117 None:intergenic
CGATCCCTGCTAAGGCCAGG+AGG 0.643069 3_3:+63054208 None:intergenic
GATCCCTGCTAAGGCCAGGA+GGG 0.648985 3_3:+63054209 None:intergenic
ATGTGATATAAAACTTCCTG+AGG 0.649987 3_3:-63051038 Msa0463580:intron
TAACGATCATGATAAAGCAA+CGG 0.650025 3_3:+63049121 None:intergenic
TCTGGTAATGGAAATTCTGG+TGG 0.652606 3_3:-63056400 Msa0463580:five_prime_UTR
AGCTAGTCCAGCATTTCTGG+AGG 0.653238 3_3:+63056609 None:intergenic
AACCTCTATACCCCATAGAG+CGG 0.653508 3_3:+63055136 None:intergenic
AAGCAACGGTTAAGAGACCT+GGG 0.655796 3_3:+63049135 None:intergenic
CTGTAGAAATACGTGTCACG+TGG 0.657113 3_3:+63056791 None:intergenic
TTAATAAGAATATAAGATGG+GGG 0.658056 3_3:+63057038 None:intergenic
CACGCAGCAGACATCTGATG+TGG 0.662501 3_3:+63048885 None:intergenic
TGAAGAAGGATAAGAAATGG+TGG 0.664057 3_3:+63050751 None:intergenic
CTGTCTGCAGAGCCTCCCAA+AGG 0.668083 3_3:+63054999 None:intergenic
AATGTCAAGGTGTTGAACGA+GGG 0.668582 3_3:-63049823 Msa0463580:CDS
ACTTGTCATTATTGCAACAG+GGG 0.669538 3_3:+63054706 None:intergenic
AGTCCCTTGAGCAAGCCTGG+TGG 0.680286 3_3:-63054448 Msa0463580:five_prime_UTR
GTGCTGCAGATCATACTGCA+TGG 0.682152 3_3:-63049742 Msa0463580:CDS
GCATCTCAAGCCGCTCTATG+GGG 0.682344 3_3:-63055146 Msa0463580:five_prime_UTR
AGGCGGCGAGCTTGTCACGG+AGG 0.683828 3_3:+63056701 None:intergenic
GCTATGAGGATATACCGTGA+AGG 0.698917 3_3:+63057114 None:intergenic
CCAAAGGATAAATTTCACCC+AGG 0.700567 3_3:+63055015 None:intergenic
ACATGATGTGAAAAGGTCTG+AGG 0.709695 3_3:-63049764 Msa0463580:CDS
CGGCGGAAATTGAATCCGGG+AGG 0.717481 3_3:+63056745 None:intergenic
TGCCTGTATAACAGAAACTG+GGG 0.723775 3_3:-63053143 Msa0463580:intron
TTGGTCGAGAGTATCGCAGG+CGG 0.726477 3_3:+63056684 None:intergenic
GAAAAGAAAAGAGAAAACGG+TGG 0.732329 3_3:+63056920 None:intergenic
TGAGTCTGGTGATTTCGCGG+CGG 0.761726 3_3:+63056728 None:intergenic
AAAGCTTCGAATCATCAACG+CGG 0.841727 3_3:-63056662 Msa0463580:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTAGATTTAATTTTTGT+CGG + chr3_3:63049813-63049832 None:intergenic 10.0%
!! AATTTATACATAAAATACAA+TGG + chr3_3:63054656-63054675 None:intergenic 10.0%
!!! AGTTTATTTCATTTATTTTT+AGG + chr3_3:63056371-63056390 None:intergenic 10.0%
!! ATTAATAAGAATATAAGATG+GGG + chr3_3:63048620-63048639 None:intergenic 15.0%
!! GATTAATAAGAATATAAGAT+GGG + chr3_3:63048621-63048640 None:intergenic 15.0%
!! TGATTAATAAGAATATAAGA+TGG + chr3_3:63048622-63048641 None:intergenic 15.0%
!! TATTAATGTGTTTATAAACA+AGG + chr3_3:63049405-63049424 None:intergenic 15.0%
!!! AATTAGATTTAATTTTTGTC+GGG + chr3_3:63049812-63049831 None:intergenic 15.0%
!!! AAATCATTTTGTATGAAATT+TGG - chr3_3:63051614-63051633 Msa0463580:intron 15.0%
!!! AATCATTTTGTATGAAATTT+GGG - chr3_3:63051615-63051634 Msa0463580:intron 15.0%
!! TAATATTATCTTTGGATTAA+AGG - chr3_3:63051739-63051758 Msa0463580:five_prime_UTR 15.0%
!! GAAAATAATGTTATGATATT+AGG - chr3_3:63051792-63051811 Msa0463580:intron 15.0%
!! AGTTTAATAACATAACATAA+TGG - chr3_3:63052225-63052244 Msa0463580:intron 15.0%
!! TAAATTAAGACATTCAAATT+TGG - chr3_3:63052766-63052785 Msa0463580:intron 15.0%
!! TAATCTTATATGTTGAAAAT+GGG - chr3_3:63053115-63053134 Msa0463580:five_prime_UTR 15.0%
!! ATTGTAGAAATAAAGTTATT+TGG + chr3_3:63053249-63053268 None:intergenic 15.0%
!! ATAACAATGAGAAATTTATA+GGG + chr3_3:63053446-63053465 None:intergenic 15.0%
!! AATAACAATGAGAAATTTAT+AGG + chr3_3:63053447-63053466 None:intergenic 15.0%
!!! TATGTATAAATTAATTTGGT+TGG - chr3_3:63054664-63054683 Msa0463580:five_prime_UTR 15.0%
!!! ATGTATAAATTAATTTGGTT+GGG - chr3_3:63054665-63054684 Msa0463580:five_prime_UTR 15.0%
!! ATTTAGCATGATAATTAAAT+AGG - chr3_3:63055178-63055197 Msa0463580:five_prime_UTR 15.0%
!!! AAATAGATTTTGTTAACTTA+TGG - chr3_3:63055519-63055538 Msa0463580:intron 15.0%
!!! TTTAAAATATTTTTTACCGA+AGG + chr3_3:63055763-63055782 None:intergenic 15.0%
!! TTAGTAGTAGAAATTATTAT+AGG + chr3_3:63056826-63056845 None:intergenic 15.0%
!! ATTTCCTGTAATTATATTAT+TGG - chr3_3:63056934-63056953 Msa0463580:five_prime_UTR 15.0%
!! TTTCCTGTAATTATATTATT+GGG - chr3_3:63056935-63056954 Msa0463580:five_prime_UTR 15.0%
!! TTAATAAGAATATAAGATGG+GGG + chr3_3:63048619-63048638 None:intergenic 20.0%
!!! ATTAGATTTAATTTTTGTCG+GGG + chr3_3:63049811-63049830 None:intergenic 20.0%
!! GAATGAATTGGAAAAAAAAA+AGG - chr3_3:63050028-63050047 Msa0463580:intron 20.0%
!!! TAAAGATCTAATTTGTGAAT+TGG - chr3_3:63051123-63051142 Msa0463580:intron 20.0%
!! AACATGAGAAAGTAATAATT+AGG + chr3_3:63051709-63051728 None:intergenic 20.0%
!! AAGAACTCTAATATTATCTT+TGG - chr3_3:63051731-63051750 Msa0463580:five_prime_UTR 20.0%
!! TTATCAAAAATAGAATAGAG+TGG - chr3_3:63051829-63051848 Msa0463580:intron 20.0%
!!! TAAAAAATTTGGAACTAACA+TGG - chr3_3:63052168-63052187 Msa0463580:intron 20.0%
!!! TATTTTTTCATTCTATCCAA+TGG - chr3_3:63052326-63052345 Msa0463580:five_prime_UTR 20.0%
!!! CGTTTTTATTAGGATATATT+GGG + chr3_3:63052411-63052430 None:intergenic 20.0%
!!! TCGTTTTTATTAGGATATAT+TGG + chr3_3:63052412-63052431 None:intergenic 20.0%
!!! AATTTAGTTTAGATGATGAA+AGG + chr3_3:63052752-63052771 None:intergenic 20.0%
!!! TAAGTTATTAACACATGTTT+TGG + chr3_3:63052907-63052926 None:intergenic 20.0%
!! TCATACATCTTATTAACAAT+TGG - chr3_3:63052939-63052958 Msa0463580:intron 20.0%
!! CTAATCTTATATGTTGAAAA+TGG - chr3_3:63053114-63053133 Msa0463580:five_prime_UTR 20.0%
!! AATCTTATATGTTGAAAATG+GGG - chr3_3:63053116-63053135 Msa0463580:five_prime_UTR 20.0%
!! AAATTAGAAAGGCTAAAATA+CGG + chr3_3:63053215-63053234 None:intergenic 20.0%
!! ATAAATTATGTAGATCAGTT+TGG - chr3_3:63053397-63053416 Msa0463580:intron 20.0%
!! TGTTATTATATCTACTTTCT+TGG - chr3_3:63053460-63053479 Msa0463580:intron 20.0%
!!! CTTGGTTTTATTGATTAAAT+TGG - chr3_3:63053478-63053497 Msa0463580:intron 20.0%
!! ATTTCAATTCATATTCATCT+AGG - chr3_3:63053933-63053952 Msa0463580:intron 20.0%
!! TGCTCATAAATATATAACAA+GGG + chr3_3:63054043-63054062 None:intergenic 20.0%
!! CATTTATTGTATATAATGAG+CGG - chr3_3:63054076-63054095 Msa0463580:intron 20.0%
!!! ATAAATTGCAAGTTTTATCT+AGG + chr3_3:63054478-63054497 None:intergenic 20.0%
!! TCCTTTGCAAAAAAAAAAAA+AGG - chr3_3:63054789-63054808 Msa0463580:intron 20.0%
!!! TCCTTTTTTTTTTTTTGCAA+AGG + chr3_3:63054793-63054812 None:intergenic 20.0%
!!! ATGTAATATTACTTTTTGTC+TGG + chr3_3:63054958-63054977 None:intergenic 20.0%
!!! ATTTTTCATAATTGCAAACA+TGG + chr3_3:63055016-63055035 None:intergenic 20.0%
!! TTCTGTCTTTATAAAACATT+TGG - chr3_3:63055061-63055080 Msa0463580:intron 20.0%
!!! CTTACAGGTTAATTTTATTT+CGG - chr3_3:63055965-63055984 Msa0463580:intron 20.0%
!!! ATTTGCTAGTAATTGATATA+TGG - chr3_3:63056104-63056123 Msa0463580:intron 20.0%
!!! CAAGTTATTTTTGTAATACT+TGG - chr3_3:63056560-63056579 Msa0463580:five_prime_UTR 20.0%
!! ACTAATATTGTAAAATTGAG+AGG - chr3_3:63056971-63056990 Msa0463580:five_prime_UTR 20.0%
! AACGAAAAGAAAAGAGAAAA+CGG + chr3_3:63048740-63048759 None:intergenic 25.0%
!!! TTTGTTTTTGTTGAAGTGTT+TGG - chr3_3:63049103-63049122 Msa0463580:three_prime_UTR 25.0%
! TTAATTCCACTCCAATTATA+CGG - chr3_3:63049509-63049528 Msa0463580:intron 25.0%
! ACATCAAGACTATTATGTTA+TGG - chr3_3:63049626-63049645 Msa0463580:intron 25.0%
!! ACCTTTATTTAAAACCAACT+GGG - chr3_3:63049667-63049686 Msa0463580:intron 25.0%
!!! ATAGAATAGTTAGTTTGCAA+GGG - chr3_3:63050100-63050119 Msa0463580:intron 25.0%
!!! TTATGAACTGGTTCTAATAA+GGG - chr3_3:63050264-63050283 Msa0463580:intron 25.0%
!! TTCTTGTACTTCAAGTTATA+TGG - chr3_3:63050911-63050930 Msa0463580:intron 25.0%
!!! TATACAATTGCTTTTCAGAA+GGG - chr3_3:63051078-63051097 Msa0463580:five_prime_UTR 25.0%
!!! TTCAAATGGTTTTTTTGTCA+AGG - chr3_3:63051269-63051288 Msa0463580:intron 25.0%
!!! TTTTTTTGTCAAGGAAGAAA+AGG - chr3_3:63051278-63051297 Msa0463580:intron 25.0%
! TTTGGATTAAAGGAAAGAAA+TGG - chr3_3:63051749-63051768 Msa0463580:five_prime_UTR 25.0%
! TAATTACGAAAAAATCGCTT+TGG - chr3_3:63052115-63052134 Msa0463580:intron 25.0%
!!! TTGCATCATTCGTTTTTATT+AGG + chr3_3:63052421-63052440 None:intergenic 25.0%
! TACTGTATTCTTAATATCGA+AGG + chr3_3:63052883-63052902 None:intergenic 25.0%
! ATTGTTAATTATCCTGATCT+AGG + chr3_3:63053022-63053041 None:intergenic 25.0%
! AGATCAGGATAATTAACAAT+TGG - chr3_3:63053022-63053041 Msa0463580:five_prime_UTR 25.0%
! ATTGTGTAGTCAAATTAGAA+AGG + chr3_3:63053226-63053245 None:intergenic 25.0%
! TATAAGATGTTTGTATTAGC+TGG + chr3_3:63053292-63053311 None:intergenic 25.0%
! CATTAAAGAGAATGTAAAGA+TGG + chr3_3:63053695-63053714 None:intergenic 25.0%
! CATCTTTACATTCTCTTTAA+TGG - chr3_3:63053693-63053712 Msa0463580:intron 25.0%
! GGCAAATTAAAAAGCAAAAA+GGG + chr3_3:63053861-63053880 None:intergenic 25.0%
! TGGCAAATTAAAAAGCAAAA+AGG + chr3_3:63053862-63053881 None:intergenic 25.0%
! CTGCTCATAAATATATAACA+AGG + chr3_3:63054044-63054063 None:intergenic 25.0%
!!! TCTTTTTTTTTTAGCAGATG+AGG + chr3_3:63054112-63054131 None:intergenic 25.0%
! GCTAAAAAAAAAAGAAGACA+TGG - chr3_3:63054117-63054136 Msa0463580:intron 25.0%
!!! TGAAGTATCTTTTTAATGTC+TGG - chr3_3:63054180-63054199 Msa0463580:intron 25.0%
!!! GAAGTATCTTTTTAATGTCT+GGG - chr3_3:63054181-63054200 Msa0463580:intron 25.0%
!! TTTAGAACCATGTTTAAAGT+TGG - chr3_3:63054392-63054411 Msa0463580:five_prime_UTR 25.0%
! TAGATGGTGTTTGAATTATT+AGG - chr3_3:63054425-63054444 Msa0463580:five_prime_UTR 25.0%
! TTTATCTAGGCAAATATTTG+AGG + chr3_3:63054465-63054484 None:intergenic 25.0%
! CTGAATATCATACTGTAATA+TGG + chr3_3:63054698-63054717 None:intergenic 25.0%
! ACTTAAAAGATTAAAACGCT+CGG + chr3_3:63054727-63054746 None:intergenic 25.0%
! AATGCATACAAGTTTCTAAA+AGG - chr3_3:63054756-63054775 Msa0463580:intron 25.0%
! AATTAAATAGGTTGTGTTTC+TGG - chr3_3:63055190-63055209 Msa0463580:five_prime_UTR 25.0%
! AATCCAAATATTATGGGAAT+CGG + chr3_3:63055286-63055305 None:intergenic 25.0%
! GGACTAAATCCAAATATTAT+GGG + chr3_3:63055292-63055311 None:intergenic 25.0%
! AGGACTAAATCCAAATATTA+TGG + chr3_3:63055293-63055312 None:intergenic 25.0%
!! GTTAATGCTATATTGCTATT+TGG - chr3_3:63055316-63055335 Msa0463580:intron 25.0%
!!! GTGATCTTTGTTTCTATAAA+TGG + chr3_3:63055383-63055402 None:intergenic 25.0%
! ATAATAGCCGAAAATGTTAT+GGG - chr3_3:63055614-63055633 Msa0463580:intron 25.0%
!!! ACAACTCTTTTTGATAACTT+GGG + chr3_3:63056068-63056087 None:intergenic 25.0%
!! TTGGAGAAGATAATATGTTT+TGG + chr3_3:63056148-63056167 None:intergenic 25.0%
!!! GCTAAAAGGTAATGTTTTTT+TGG + chr3_3:63056167-63056186 None:intergenic 25.0%
! TTAGAAAATTAAGTGTTCCA+TGG + chr3_3:63056189-63056208 None:intergenic 25.0%
!! ATAGTGAGTTTTTATGAACT+AGG + chr3_3:63056234-63056253 None:intergenic 25.0%
!!! TATTGTTATTTTACCGATAC+AGG - chr3_3:63056441-63056460 Msa0463580:five_prime_UTR 25.0%
!!! ATTGTTATTTTACCGATACA+GGG - chr3_3:63056442-63056461 Msa0463580:five_prime_UTR 25.0%
! AACAGTGATTCATGTTAAAT+CGG + chr3_3:63056615-63056634 None:intergenic 25.0%
! ATTTCTACTACTAAAATGAC+AGG - chr3_3:63056832-63056851 Msa0463580:five_prime_UTR 25.0%
! ATTACAGGAAATGAAAAACT+CGG + chr3_3:63056926-63056945 None:intergenic 25.0%
! CAACCCAATAATATAATTAC+AGG + chr3_3:63056941-63056960 None:intergenic 25.0%
! CAAGTCTCTTTCATTATTAA+GGG - chr3_3:63057025-63057044 Msa0463580:five_prime_UTR 25.0%
!! AATGATTTTGAGAAAGAGAG+AGG + chr3_3:63048801-63048820 None:intergenic 30.0%
TAATTCCACTCCAATTATAC+GGG - chr3_3:63049510-63049529 Msa0463580:intron 30.0%
AGAAATTCTCCACAATATCA+AGG + chr3_3:63049584-63049603 None:intergenic 30.0%
TGGAGAATTTCTGTTAAATG+CGG - chr3_3:63049592-63049611 Msa0463580:intron 30.0%
TTATGTTATGGCTTAGATTG+AGG - chr3_3:63049638-63049657 Msa0463580:intron 30.0%
! GACCTTTATTTAAAACCAAC+TGG - chr3_3:63049666-63049685 Msa0463580:intron 30.0%
!!! TCCCAGTTGGTTTTAAATAA+AGG + chr3_3:63049671-63049690 None:intergenic 30.0%
!! ATTGGTTTGTAAACCCAATT+CGG + chr3_3:63049696-63049715 None:intergenic 30.0%
! AATCCATGACATTTTCATAC+AGG - chr3_3:63049832-63049851 Msa0463580:CDS 30.0%
! ATCCATGACATTTTCATACA+GGG - chr3_3:63049833-63049852 Msa0463580:CDS 30.0%
TTGTCCCCAATATGAAAAAA+TGG - chr3_3:63049895-63049914 Msa0463580:intron 30.0%
!!! TTTGGGTTTATTTTTTTGCC+AGG - chr3_3:63049928-63049947 Msa0463580:intron 30.0%
!!! TTGGGTTTATTTTTTTGCCA+GGG - chr3_3:63049929-63049948 Msa0463580:intron 30.0%
AAAATTGTGAGAGACTGAAT+TGG - chr3_3:63049970-63049989 Msa0463580:intron 30.0%
AAATTGTGAGAGACTGAATT+GGG - chr3_3:63049971-63049990 Msa0463580:intron 30.0%
ACTAACTATTCTATCTCACA+TGG + chr3_3:63050094-63050113 None:intergenic 30.0%
!! GATAGAATAGTTAGTTTGCA+AGG - chr3_3:63050099-63050118 Msa0463580:intron 30.0%
! ATATCTGAGCTTTTGTCATT+CGG - chr3_3:63050195-63050214 Msa0463580:five_prime_UTR 30.0%
ATACTTTGCATGTTATGAAC+TGG - chr3_3:63050252-63050271 Msa0463580:intron 30.0%
!! GTTATGAACTGGTTCTAATA+AGG - chr3_3:63050263-63050282 Msa0463580:intron 30.0%
GTTGTTATAATTGCATTACC+TGG - chr3_3:63050538-63050557 Msa0463580:intron 30.0%
CTAAATGCATATTATGAACC+AGG + chr3_3:63050559-63050578 None:intergenic 30.0%
TACATATGCTTCATACATAC+AGG - chr3_3:63050580-63050599 Msa0463580:intron 30.0%
ACATATGCTTCATACATACA+GGG - chr3_3:63050581-63050600 Msa0463580:intron 30.0%
TAATAAGATCTTGTCCTTCT+AGG - chr3_3:63050606-63050625 Msa0463580:intron 30.0%
AATAAGATCTTGTCCTTCTA+GGG - chr3_3:63050607-63050626 Msa0463580:intron 30.0%
AACTTGTCATTATTGCAACA+GGG + chr3_3:63050952-63050971 None:intergenic 30.0%
ATAAAACCTGCTCAAAAAGT+TGG + chr3_3:63051051-63051070 None:intergenic 30.0%
!! CTATACAATTGCTTTTCAGA+AGG - chr3_3:63051077-63051096 Msa0463580:five_prime_UTR 30.0%
ACTTGAGATATCAATAACGA+CGG + chr3_3:63051327-63051346 None:intergenic 30.0%
TTACAAATCACTGATACTGT+TGG - chr3_3:63051388-63051407 Msa0463580:intron 30.0%
ATTCCTTCTTAAAGTTGACA+GGG - chr3_3:63051519-63051538 Msa0463580:five_prime_UTR 30.0%
CATGGAAATCATGCATTTAA+AGG + chr3_3:63051676-63051695 None:intergenic 30.0%
TTAAATGCATGATTTCCATG+TGG - chr3_3:63051676-63051695 Msa0463580:intron 30.0%
TAATTAGGTATAATGCCACA+TGG + chr3_3:63051694-63051713 None:intergenic 30.0%
TGATATTAGGTTTCATTGTC+TGG - chr3_3:63051805-63051824 Msa0463580:intron 30.0%
AAATAGAATAGAGTGGAACT+TGG - chr3_3:63051836-63051855 Msa0463580:intron 30.0%
AATAGAATAGAGTGGAACTT+GGG - chr3_3:63051837-63051856 Msa0463580:intron 30.0%
AAAGTTGAAGTTGTCAAACT+GGG - chr3_3:63051888-63051907 Msa0463580:intron 30.0%
AAAGATAGCAAATTGATCCA+GGG + chr3_3:63051971-63051990 None:intergenic 30.0%
TAATGAAGTAATCAAGCCAT+TGG + chr3_3:63052345-63052364 None:intergenic 30.0%
AGAAGGAATTAATGTACTGA+TGG - chr3_3:63052566-63052585 Msa0463580:intron 30.0%
! AGGAAAATCATGTACCTTTT+TGG + chr3_3:63052684-63052703 None:intergenic 30.0%
GAAATATTGAAATCATGTGC+AGG + chr3_3:63052704-63052723 None:intergenic 30.0%
TTGCACTGCTTCAAATTATT+TGG - chr3_3:63052809-63052828 Msa0463580:intron 30.0%
TTTATACGTGTCTCACTATA+AGG + chr3_3:63052854-63052873 None:intergenic 30.0%
!!! GGAGTTATTTTTTTTGCTCA+AGG - chr3_3:63053137-63053156 Msa0463580:intron 30.0%
!! GTTAGTGTTAGTTTGTTTCA+TGG - chr3_3:63053159-63053178 Msa0463580:intron 30.0%
ATTTCTACAATCAAGTTTGC+AGG - chr3_3:63053258-63053277 Msa0463580:intron 30.0%
!! ATATGTTGATTTACCATCTG+CGG - chr3_3:63053309-63053328 Msa0463580:intron 30.0%
AAGAATGTGAATAGTATACC+AGG - chr3_3:63053349-63053368 Msa0463580:intron 30.0%
TTTGTATTTAACACCATTCC+TGG + chr3_3:63053370-63053389 None:intergenic 30.0%
AACCACAAGCTGAAATTAAT+GGG - chr3_3:63053642-63053661 Msa0463580:intron 30.0%
! TTATATTTCTAAGCCAGGAA+AGG + chr3_3:63053671-63053690 None:intergenic 30.0%
! ATGGTTTATATTTCTAAGCC+AGG + chr3_3:63053676-63053695 None:intergenic 30.0%
CTATTCTGTTCATTACTTAG+TGG - chr3_3:63053723-63053742 Msa0463580:intron 30.0%
TGTGTTAACATTTCATTCAC+GGG + chr3_3:63053821-63053840 None:intergenic 30.0%
GTGTGTTAACATTTCATTCA+CGG + chr3_3:63053822-63053841 None:intergenic 30.0%
! TATTCATCTAGGTGCTATAA+TGG - chr3_3:63053944-63053963 Msa0463580:intron 30.0%
! AGATGAGATATAAGAGTACA+AGG + chr3_3:63054270-63054289 None:intergenic 30.0%
!! TCAGGAAGTTTTATATCACA+TGG + chr3_3:63054617-63054636 None:intergenic 30.0%
ATGTGATATAAAACTTCCTG+AGG - chr3_3:63054616-63054635 Msa0463580:five_prime_UTR 30.0%
! TTTATGTCATGTTTTCTCTC+TGG - chr3_3:63054842-63054861 Msa0463580:intron 30.0%
CTAAATACAACATCATCAAC+GGG + chr3_3:63055164-63055183 None:intergenic 30.0%
GCTAAATACAACATCATCAA+CGG + chr3_3:63055165-63055184 None:intergenic 30.0%
AATCCGATTCCCATAATATT+TGG - chr3_3:63055280-63055299 Msa0463580:five_prime_UTR 30.0%
AGCAATATAGCATTAACGAA+AGG + chr3_3:63055313-63055332 None:intergenic 30.0%
CATAATAGCCGAAAATGTTA+TGG - chr3_3:63055613-63055632 Msa0463580:intron 30.0%
ACAGCACTTCTTATTGATAT+AGG + chr3_3:63055702-63055721 None:intergenic 30.0%
!!! ATATTTTTTACCGAAGGCTA+GGG + chr3_3:63055757-63055776 None:intergenic 30.0%
!!! AATATTTTTTACCGAAGGCT+AGG + chr3_3:63055758-63055777 None:intergenic 30.0%
ATGTAAATTGCAGAATGTCA+AGG - chr3_3:63055818-63055837 Msa0463580:intron 30.0%
ATTGGAAACATGATGTGAAA+AGG - chr3_3:63055883-63055902 Msa0463580:intron 30.0%
!! GACAACTCTTTTTGATAACT+TGG + chr3_3:63056069-63056088 None:intergenic 30.0%
CAATTACTAGCAAATCTGTA+TGG + chr3_3:63056099-63056118 None:intergenic 30.0%
! AAAACATTACCTTTTAGCCA+TGG - chr3_3:63056169-63056188 Msa0463580:intron 30.0%
! TGAGTTTTTATGAACTAGGA+GGG + chr3_3:63056230-63056249 None:intergenic 30.0%
! GCTTTTCAATATTCTTGTAC+AGG + chr3_3:63056303-63056322 None:intergenic 30.0%
AATACATGATTTCCCTGTAT+CGG + chr3_3:63056457-63056476 None:intergenic 30.0%
ATCTTCAATTTGTATCCATC+TGG + chr3_3:63056487-63056506 None:intergenic 30.0%
TAACGATCATGATAAAGCAA+CGG + chr3_3:63056536-63056555 None:intergenic 30.0%
ATCACTGTTTCCATTAATTC+AGG - chr3_3:63056626-63056645 Msa0463580:five_prime_UTR 30.0%
GATTGCTAAACCTGAATTAA+TGG + chr3_3:63056639-63056658 None:intergenic 30.0%
GCAAGTCTCTTTCATTATTA+AGG - chr3_3:63057024-63057043 Msa0463580:five_prime_UTR 30.0%
ACGAACTTGTGAATATTTGA+TGG + chr3_3:63057068-63057087 None:intergenic 30.0%
TATCAAGAGAAGATGCTATG+AGG + chr3_3:63048557-63048576 None:intergenic 35.0%
TGTTGTGTTGTGAGTTAGAA+TGG + chr3_3:63048647-63048666 None:intergenic 35.0%
ATTATGGTGAAGAAGTGAAG+TGG + chr3_3:63048712-63048731 None:intergenic 35.0%
GAAAAGAAAAGAGAAAACGG+TGG + chr3_3:63048737-63048756 None:intergenic 35.0%
GAAGAAGAAGAAGATGAAGA+TGG + chr3_3:63048831-63048850 None:intergenic 35.0%
! ACGTATTTCTACAGAACCAT+TGG - chr3_3:63048872-63048891 Msa0463580:three_prime_UTR 35.0%
! ATGATTGAGAAGATGGATTC+TGG - chr3_3:63049236-63049255 Msa0463580:intron 35.0%
!! GATTCTGGTAATGGAAATTC+TGG - chr3_3:63049251-63049270 Msa0463580:intron 35.0%
GTTTGGAGGATCATGAAATT+CGG - chr3_3:63049291-63049310 Msa0463580:intron 35.0%
TTTGGAGGATCATGAAATTC+GGG - chr3_3:63049292-63049311 Msa0463580:intron 35.0%
GAATAAGTTGTTAGAGACGT+TGG - chr3_3:63049319-63049338 Msa0463580:intron 35.0%
ATTGCATTGGAGGAGTAATT+GGG - chr3_3:63049363-63049382 Msa0463580:intron 35.0%
GAACCAAGGTTCTTTAATAG+TGG - chr3_3:63049532-63049551 Msa0463580:intron 35.0%
TTGCCACTATTAAAGAACCT+TGG + chr3_3:63049538-63049557 None:intergenic 35.0%
AGGTTCTTTAATAGTGGCAA+TGG - chr3_3:63049538-63049557 Msa0463580:intron 35.0%
TCTTTAATAGTGGCAATGGT+TGG - chr3_3:63049542-63049561 Msa0463580:intron 35.0%
! TCTTTTCTCTCTTCCACTAT+CGG + chr3_3:63049720-63049739 None:intergenic 35.0%
! TCCATGACATTTTCATACAG+GGG - chr3_3:63049834-63049853 Msa0463580:CDS 35.0%
TCACTCTGATATAATGAGTC+AGG - chr3_3:63049866-63049885 Msa0463580:intron 35.0%
CACTCTGATATAATGAGTCA+GGG - chr3_3:63049867-63049886 Msa0463580:intron 35.0%
!!! CGTGCCATTTTTTCATATTG+GGG + chr3_3:63049902-63049921 None:intergenic 35.0%
!!! CCGTGCCATTTTTTCATATT+GGG + chr3_3:63049903-63049922 None:intergenic 35.0%
CCCAATATGAAAAAATGGCA+CGG - chr3_3:63049900-63049919 Msa0463580:intron 35.0%
!!! TCCGTGCCATTTTTTCATAT+TGG + chr3_3:63049904-63049923 None:intergenic 35.0%
AAAAATGGCACGGAGTAATT+TGG - chr3_3:63049910-63049929 Msa0463580:intron 35.0%
AAAATGGCACGGAGTAATTT+GGG - chr3_3:63049911-63049930 Msa0463580:intron 35.0%
!!! TTTTTTGCCAGGGTCTAAAA+TGG - chr3_3:63049939-63049958 Msa0463580:intron 35.0%
!! TTTTTGCCAGGGTCTAAAAT+GGG - chr3_3:63049940-63049959 Msa0463580:intron 35.0%
ACGTTGCAGTTATCAGATTA+TGG - chr3_3:63050348-63050367 Msa0463580:intron 35.0%
CAGTTATCAGATTATGGTTC+TGG - chr3_3:63050354-63050373 Msa0463580:intron 35.0%
GGAACTTATTGTCCAACAAT+TGG - chr3_3:63050375-63050394 Msa0463580:intron 35.0%
! AGTGAAAGAAGGCCAAATTT+TGG - chr3_3:63050438-63050457 Msa0463580:intron 35.0%
! GTGAAAGAAGGCCAAATTTT+GGG - chr3_3:63050439-63050458 Msa0463580:intron 35.0%
CTGGGTGAAATTTATCCTTT+GGG - chr3_3:63050640-63050659 Msa0463580:intron 35.0%
! AGGTCTTATAAGAGATCTTC+AGG - chr3_3:63050756-63050775 Msa0463580:five_prime_UTR 35.0%
!! AAGAATTCTCTAGCCTTGAA+AGG + chr3_3:63050896-63050915 None:intergenic 35.0%
ACTTGTCATTATTGCAACAG+GGG + chr3_3:63050951-63050970 None:intergenic 35.0%
GAACTTGTCATTATTGCAAC+AGG + chr3_3:63050953-63050972 None:intergenic 35.0%
!! AACTTTCCAACTTTTTGAGC+AGG - chr3_3:63051042-63051061 Msa0463580:five_prime_UTR 35.0%
TTTGAAGATGCCTTTGTCAT+GGG + chr3_3:63051255-63051274 None:intergenic 35.0%
ATTTGAAGATGCCTTTGTCA+TGG + chr3_3:63051256-63051275 None:intergenic 35.0%
!! ATGACAAAGGCATCTTCAAA+TGG - chr3_3:63051255-63051274 Msa0463580:intron 35.0%
! CTGTCAACTTTAAGAAGGAA+TGG + chr3_3:63051520-63051539 None:intergenic 35.0%
CATTCCTTCTTAAAGTTGAC+AGG - chr3_3:63051518-63051537 Msa0463580:five_prime_UTR 35.0%
AGGAAAGAAATGGAATGAAG+TGG - chr3_3:63051759-63051778 Msa0463580:five_prime_UTR 35.0%
GGAAAGAAATGGAATGAAGT+GGG - chr3_3:63051760-63051779 Msa0463580:five_prime_UTR 35.0%
GAAAGAAATGGAATGAAGTG+GGG - chr3_3:63051761-63051780 Msa0463580:five_prime_UTR 35.0%
AAAGAAATGGAATGAAGTGG+GGG - chr3_3:63051762-63051781 Msa0463580:five_prime_UTR 35.0%
GAAAGTTGAAGTTGTCAAAC+TGG - chr3_3:63051887-63051906 Msa0463580:intron 35.0%
CAAAGATAGCAAATTGATCC+AGG + chr3_3:63051972-63051991 None:intergenic 35.0%
AAATTTCCATTTAGTCCAGC+AGG - chr3_3:63051996-63052015 Msa0463580:intron 35.0%
AATATGCTGCTCTCACAATT+AGG + chr3_3:63052037-63052056 None:intergenic 35.0%
ACTCGATGTAATCATCAACT+TGG + chr3_3:63052208-63052227 None:intergenic 35.0%
CATAGAGTGTAATGCAACAT+AGG + chr3_3:63052382-63052401 None:intergenic 35.0%
TACACTGAATTCGACAAGTT+TGG - chr3_3:63052639-63052658 Msa0463580:intron 35.0%
ACACTGAATTCGACAAGTTT+GGG - chr3_3:63052640-63052659 Msa0463580:intron 35.0%
! GACAAGTTTGGGATTACTAA+TGG - chr3_3:63052651-63052670 Msa0463580:intron 35.0%
! CTAATGGATCTCTTCCAAAA+AGG - chr3_3:63052667-63052686 Msa0463580:intron 35.0%
TCAATATTTCATCCATCTCG+TGG - chr3_3:63052714-63052733 Msa0463580:intron 35.0%
ATAGGCAATTGAACCATCTT+TGG + chr3_3:63053070-63053089 None:intergenic 35.0%
TGCAAACAAAAGATCCAGAT+AGG + chr3_3:63053088-63053107 None:intergenic 35.0%
!! GTTAGTTTGTTTCATGGTGA+AGG - chr3_3:63053165-63053184 Msa0463580:intron 35.0%
TGTGAATAGTATACCAGGAA+TGG - chr3_3:63053354-63053373 Msa0463580:intron 35.0%
ATCAGTTTGGAAGACATTGT+AGG - chr3_3:63053410-63053429 Msa0463580:intron 35.0%
CAACCACAAGCTGAAATTAA+TGG - chr3_3:63053641-63053660 Msa0463580:intron 35.0%
AACCCATTAATTTCAGCTTG+TGG + chr3_3:63053647-63053666 None:intergenic 35.0%
!! AATTAATGGGTTTCCTTTCC+TGG - chr3_3:63053655-63053674 Msa0463580:intron 35.0%
GTTCATTACTTAGTGGTGTT+TGG - chr3_3:63053730-63053749 Msa0463580:intron 35.0%
TTACTTAGTGGTGTTTGGTA+AGG - chr3_3:63053735-63053754 Msa0463580:intron 35.0%
TACTTAGTGGTGTTTGGTAA+GGG - chr3_3:63053736-63053755 Msa0463580:intron 35.0%
AACATTTCATTCACGGGAAA+AGG + chr3_3:63053815-63053834 None:intergenic 35.0%
TTGTATATAATGAGCGGAGA+AGG - chr3_3:63054082-63054101 Msa0463580:intron 35.0%
TGTATATAATGAGCGGAGAA+GGG - chr3_3:63054083-63054102 Msa0463580:intron 35.0%
CATGATTAGTAAGTCAAACC+TGG + chr3_3:63054158-63054177 None:intergenic 35.0%
TTAAAATCGAATCAACGCGA+TGG + chr3_3:63054235-63054254 None:intergenic 35.0%
!! CTTTTTAGCCTCTTTTTCTG+AGG - chr3_3:63054288-63054307 Msa0463580:intron 35.0%
!! TAGTTATTTTCCAGCATACC+TGG - chr3_3:63054318-63054337 Msa0463580:intron 35.0%
!! TGGTTCTAAAACATAGCAGT+AGG + chr3_3:63054382-63054401 None:intergenic 35.0%
AATTCAAACACCATCTAGTG+CGG + chr3_3:63054422-63054441 None:intergenic 35.0%
TATCTTGAATGTGTCAGTGA+CGG - chr3_3:63054497-63054516 Msa0463580:five_prime_UTR 35.0%
ATCAGGTGTCTGCATATAAA+TGG + chr3_3:63054549-63054568 None:intergenic 35.0%
ATTTATATGCAGACACCTGA+TGG - chr3_3:63054548-63054567 Msa0463580:intron 35.0%
! GCATACAAGTTTCTAAAAGG+TGG - chr3_3:63054759-63054778 Msa0463580:intron 35.0%
GATGAGAACTACGTTTATTC+AGG - chr3_3:63054879-63054898 Msa0463580:intron 35.0%
TGAAGAAGGATAAGAAATGG+TGG + chr3_3:63054906-63054925 None:intergenic 35.0%
GGATGAAGAAGGATAAGAAA+TGG + chr3_3:63054909-63054928 None:intergenic 35.0%
ATACGCGTTACAACACTTTA+TGG + chr3_3:63055223-63055242 None:intergenic 35.0%
!! TCTTTGCTGTGACAGTTTTA+CGG - chr3_3:63055417-63055436 Msa0463580:intron 35.0%
!! CTTATGGCATTGAGTTGATA+AGG - chr3_3:63055535-63055554 Msa0463580:intron 35.0%
!! GCATTGAGTTGATAAGGTAA+CGG - chr3_3:63055541-63055560 Msa0463580:intron 35.0%
!! CATTGAGTTGATAAGGTAAC+GGG - chr3_3:63055542-63055561 Msa0463580:intron 35.0%
TTCCATTGACCTGGAATAAA+GGG + chr3_3:63055586-63055605 None:intergenic 35.0%
! CATTGAGCCCATAACATTTT+CGG + chr3_3:63055624-63055643 None:intergenic 35.0%
TCAATGAAGATTGATGAGAG+TGG - chr3_3:63055638-63055657 Msa0463580:intron 35.0%
TCTTATTGATATAGGCAGCA+CGG + chr3_3:63055694-63055713 None:intergenic 35.0%
AGGCAAGATCAATGTAATAC+AGG + chr3_3:63055728-63055747 None:intergenic 35.0%
! GTTATGGTGGAAATGTGTAT+TGG - chr3_3:63055865-63055884 Msa0463580:intron 35.0%
TTAAGTGTTCCATGGCTAAA+AGG + chr3_3:63056181-63056200 None:intergenic 35.0%
! GTGAGTTTTTATGAACTAGG+AGG + chr3_3:63056231-63056250 None:intergenic 35.0%
ATATTCTTGTACAGGTGAGT+AGG + chr3_3:63056295-63056314 None:intergenic 35.0%
! CATGTATTTGAAGTTCCAGA+TGG - chr3_3:63056469-63056488 Msa0463580:five_prime_UTR 35.0%
TACAAATTGAAGATCATGCC+AGG - chr3_3:63056493-63056512 Msa0463580:five_prime_UTR 35.0%
! GTTGCTTTATCATGATCGTT+AGG - chr3_3:63056535-63056554 Msa0463580:five_prime_UTR 35.0%
CAGTTAGATCCGATTGAAAA+GGG - chr3_3:63056659-63056678 Msa0463580:five_prime_UTR 35.0%
! TCCATCATACCCTTTTCAAT+CGG + chr3_3:63056671-63056690 None:intergenic 35.0%
AAAACAACCTAATGTCGCAA+AGG + chr3_3:63056874-63056893 None:intergenic 35.0%
GACATTCAAACACATGAACT+TGG + chr3_3:63057116-63057135 None:intergenic 35.0%
!! AGGAAGAAGTGCTTATTAGC+CGG + chr3_3:63048517-63048536 None:intergenic 40.0%
AGAGAAAACGGTGGTGATTA+TGG + chr3_3:63048728-63048747 None:intergenic 40.0%
GAGTGTGAATCTAGAAGTGA+AGG + chr3_3:63048768-63048787 None:intergenic 40.0%
!!! CGTTGATGATTCGAAGCTTT+TGG + chr3_3:63048992-63049011 None:intergenic 40.0%
AAAGCTTCGAATCATCAACG+CGG - chr3_3:63048992-63049011 Msa0463580:three_prime_UTR 40.0%
TACAGAGTGAGACGTTTCTT+CGG - chr3_3:63049017-63049036 Msa0463580:three_prime_UTR 40.0%
! TCAAGAGCATGTGTTGTGTT+CGG - chr3_3:63049136-63049155 Msa0463580:CDS 40.0%
! GAGAAGATGGATTCTGGTAA+TGG - chr3_3:63049242-63049261 Msa0463580:intron 40.0%
!! TCTGGTAATGGAAATTCTGG+TGG - chr3_3:63049254-63049273 Msa0463580:intron 40.0%
!!! GAAATTCTGGTGGTGGTTTT+GGG - chr3_3:63049264-63049283 Msa0463580:intron 40.0%
GAGAGGTTCTATGATTGCAT+TGG - chr3_3:63049350-63049369 Msa0463580:intron 40.0%
AGGTTCTATGATTGCATTGG+AGG - chr3_3:63049353-63049372 Msa0463580:intron 40.0%
GATTGCATTGGAGGAGTAAT+TGG - chr3_3:63049362-63049381 Msa0463580:intron 40.0%
AACCTTGGTTCCCGTATAAT+TGG + chr3_3:63049523-63049542 None:intergenic 40.0%
TGGTGCAATCCTTGATATTG+TGG - chr3_3:63049572-63049591 Msa0463580:intron 40.0%
TATGGCTTAGATTGAGGTTG+TGG - chr3_3:63049644-63049663 Msa0463580:intron 40.0%
TTACAAACCAATCCCGATAG+TGG - chr3_3:63049704-63049723 Msa0463580:intron 40.0%
! CTTTTCTCTCTTCCACTATC+GGG + chr3_3:63049719-63049738 None:intergenic 40.0%
TAAATGTGAGGGGCTGAATT+GGG + chr3_3:63049769-63049788 None:intergenic 40.0%
ATAAATGTGAGGGGCTGAAT+TGG + chr3_3:63049770-63049789 None:intergenic 40.0%
! TTTTTGTCGGGGACTAGATT+AGG + chr3_3:63049800-63049819 None:intergenic 40.0%
ACCCCTGTATGAAAATGTCA+TGG + chr3_3:63049838-63049857 None:intergenic 40.0%
TCGTGCTGTCTTGAATGAAT+TGG - chr3_3:63050016-63050035 Msa0463580:intron 40.0%
TTCGAACGACACATAACAGT+GGG + chr3_3:63050157-63050176 None:intergenic 40.0%
AATAAGGGCAGAAGTGGTTT+AGG - chr3_3:63050279-63050298 Msa0463580:intron 40.0%
TTGTCCAACAATTGGTTGAC+CGG - chr3_3:63050383-63050402 Msa0463580:intron 40.0%
TTGACCGGAAGAATACAAAC+TGG - chr3_3:63050398-63050417 Msa0463580:intron 40.0%
GAGACCAGTTTGTATTCTTC+CGG + chr3_3:63050405-63050424 None:intergenic 40.0%
! GCTTGACCTTTCTGAAAGTA+CGG - chr3_3:63050480-63050499 Msa0463580:intron 40.0%
CATACTCCGTACTTTCAGAA+AGG + chr3_3:63050489-63050508 None:intergenic 40.0%
CCAAAGGATAAATTTCACCC+AGG + chr3_3:63050642-63050661 None:intergenic 40.0%
CCTGGGTGAAATTTATCCTT+TGG - chr3_3:63050639-63050658 Msa0463580:intron 40.0%
GGTGAAATTTATCCTTTGGG+AGG - chr3_3:63050643-63050662 Msa0463580:intron 40.0%
GATTTAGTTGATCCTAGCAC+TGG - chr3_3:63050682-63050701 Msa0463580:intron 40.0%
AACAAAGTCCTCCCACAAAA+CGG + chr3_3:63050733-63050752 None:intergenic 40.0%
!! TTCTGCTGTTTCACCTTTCA+AGG - chr3_3:63050880-63050899 Msa0463580:intron 40.0%
! CATCCCTGTCAACTTTAAGA+AGG + chr3_3:63051525-63051544 None:intergenic 40.0%
GAAGTTGTCAAACTGGGTTA+AGG - chr3_3:63051894-63051913 Msa0463580:intron 40.0%
TTAGTTCCTGCTGGACTAAA+TGG + chr3_3:63052005-63052024 None:intergenic 40.0%
! TATGTAGGTTTAGTTCCTGC+TGG + chr3_3:63052014-63052033 None:intergenic 40.0%
GCTCTCACAATTAGGTATGT+AGG + chr3_3:63052029-63052048 None:intergenic 40.0%
!! AAATGCGAAGTGTTGCATAG+TGG + chr3_3:63052063-63052082 None:intergenic 40.0%
AGGTTGGAAGTTGGATAGAA+AGG + chr3_3:63052264-63052283 None:intergenic 40.0%
AGAAGGAAAAGGTTGGAAGT+TGG + chr3_3:63052273-63052292 None:intergenic 40.0%
GATTGGAAGAAGGAAAAGGT+TGG + chr3_3:63052280-63052299 None:intergenic 40.0%
! ACCTTTTCCTTCTTCCAATC+TGG - chr3_3:63052280-63052299 Msa0463580:five_prime_UTR 40.0%
TCCAGATTGGAAGAAGGAAA+AGG + chr3_3:63052284-63052303 None:intergenic 40.0%
! TTTTCCTTCTTCCAATCTGG+AGG - chr3_3:63052283-63052302 Msa0463580:five_prime_UTR 40.0%
ATTTCCTCCAGATTGGAAGA+AGG + chr3_3:63052290-63052309 None:intergenic 40.0%
TGTGCCTGTATAACAGAAAC+TGG - chr3_3:63052509-63052528 Msa0463580:intron 40.0%
GTGCCTGTATAACAGAAACT+GGG - chr3_3:63052510-63052529 Msa0463580:intron 40.0%
TGCCTGTATAACAGAAACTG+GGG - chr3_3:63052511-63052530 Msa0463580:intron 40.0%
AACCCCAGTTTCTGTTATAC+AGG + chr3_3:63052516-63052535 None:intergenic 40.0%
ATGGAGAAGAAATGTCCAGA+TGG - chr3_3:63052585-63052604 Msa0463580:intron 40.0%
TCAAATCACATTCCACGAGA+TGG + chr3_3:63052729-63052748 None:intergenic 40.0%
TGTAGTCATGAACCAGAGAT+AGG - chr3_3:63052994-63053013 Msa0463580:five_prime_UTR 40.0%
! ATTGAACCATCTTTGGAGGT+TGG + chr3_3:63053063-63053082 None:intergenic 40.0%
AGATGGTTCAATTGCCTATC+TGG - chr3_3:63053071-63053090 Msa0463580:five_prime_UTR 40.0%
ACACCAATAACAGTCTGAGT+AGG - chr3_3:63053595-63053614 Msa0463580:intron 40.0%
ACTCCTACTCAGACTGTTAT+TGG + chr3_3:63053601-63053620 None:intergenic 40.0%
!!! TTTTAATTTGCCAGCGTCTC+TGG - chr3_3:63053869-63053888 Msa0463580:intron 40.0%
! ATCTAGGTGCTATAATGGTG+TGG - chr3_3:63053949-63053968 Msa0463580:intron 40.0%
AGTGCAAACCTCAGAAAAAG+AGG + chr3_3:63054299-63054318 None:intergenic 40.0%
! AGTAAAGTGAGCTCTAATCC+AGG + chr3_3:63054339-63054358 None:intergenic 40.0%
CGGTTCTCCAACTTTAAACA+TGG + chr3_3:63054402-63054421 None:intergenic 40.0%
! ATATCCAATAGAGCACCATC+AGG + chr3_3:63054566-63054585 None:intergenic 40.0%
TCGTTTAATGTACATGCCAG+GGG + chr3_3:63055123-63055142 None:intergenic 40.0%
CTCGTTTAATGTACATGCCA+GGG + chr3_3:63055124-63055143 None:intergenic 40.0%
GCGTTACAACACTTTATGGA+TGG + chr3_3:63055219-63055238 None:intergenic 40.0%
TAACTCAGATCCCTTCGATA+TGG + chr3_3:63055448-63055467 None:intergenic 40.0%
GGGATCTGAGTTACAAATAG+AGG - chr3_3:63055455-63055474 Msa0463580:intron 40.0%
CTTCCATTGACCTGGAATAA+AGG + chr3_3:63055587-63055606 None:intergenic 40.0%
! CATTTTCGGCTATTATGACC+AGG + chr3_3:63055610-63055629 None:intergenic 40.0%
GTGAATCCATACTGCATCAT+GGG - chr3_3:63055660-63055679 Msa0463580:intron 40.0%
!! GAGCTTCTTGTTACTTTGCT+AGG - chr3_3:63055787-63055806 Msa0463580:intron 40.0%
!! TCTTGTTACTTTGCTAGGTG+TGG - chr3_3:63055792-63055811 Msa0463580:intron 40.0%
!! AATGTCAAGGTGTTGAACGA+GGG - chr3_3:63055831-63055850 Msa0463580:intron 40.0%
TGTTGAACGAGGGAATTGAT+TGG - chr3_3:63055841-63055860 Msa0463580:intron 40.0%
GAGGGAATTGATTGGAGTTA+TGG - chr3_3:63055849-63055868 Msa0463580:intron 40.0%
GGAATTGATTGGAGTTATGG+TGG - chr3_3:63055852-63055871 Msa0463580:intron 40.0%
ACATGATGTGAAAAGGTCTG+AGG - chr3_3:63055890-63055909 Msa0463580:intron 40.0%
AGCTACTGATGTTGTCTTAC+AGG - chr3_3:63055950-63055969 Msa0463580:intron 40.0%
ATACAATACCACCCACACAT+TGG - chr3_3:63056027-63056046 Msa0463580:intron 40.0%
TACAATACCACCCACACATT+GGG - chr3_3:63056028-63056047 Msa0463580:intron 40.0%
! CCTTTTCAATCGGATCTAAC+TGG + chr3_3:63056661-63056680 None:intergenic 40.0%
CCAGTTAGATCCGATTGAAA+AGG - chr3_3:63056658-63056677 Msa0463580:five_prime_UTR 40.0%
! TCCGATTGAAAAGGGTATGA+TGG - chr3_3:63056667-63056686 Msa0463580:five_prime_UTR 40.0%
CACTGGGATTACAAGATAGA+AGG - chr3_3:63056704-63056723 Msa0463580:five_prime_UTR 40.0%
! TCATGGTTCACAGTTGATGT+TGG - chr3_3:63056794-63056813 Msa0463580:five_prime_UTR 40.0%
AGTTCAACCTTTGCGACATT+AGG - chr3_3:63056864-63056883 Msa0463580:five_prime_UTR 40.0%
ATTGAGAGGAATGCAAGCAA+TGG - chr3_3:63056985-63057004 Msa0463580:five_prime_UTR 40.0%
GGCGACTTACAACAGAAAAT+GGG + chr3_3:63057095-63057114 None:intergenic 40.0%
TGGCGACTTACAACAGAAAA+TGG + chr3_3:63057096-63057115 None:intergenic 40.0%
ATGAGGATATACCGTGAAGG+AGG + chr3_3:63048540-63048559 None:intergenic 45.0%
GCTATGAGGATATACCGTGA+AGG + chr3_3:63048543-63048562 None:intergenic 45.0%
! TGGGGGTGTGAAGATGAATT+TGG + chr3_3:63048602-63048621 None:intergenic 45.0%
AAGTGAAGTGGAGTGAAGCA+TGG + chr3_3:63048700-63048719 None:intergenic 45.0%
CTGTAGAAATACGTGTCACG+TGG + chr3_3:63048866-63048885 None:intergenic 45.0%
! GGTGGTGGTGATAATTCCAA+TGG + chr3_3:63048891-63048910 None:intergenic 45.0%
!! CAGAAATGCTGGACTAGCTA+GGG - chr3_3:63049049-63049068 Msa0463580:three_prime_UTR 45.0%
! GTTGAAGTGTTTGGTAGCTG+CGG - chr3_3:63049112-63049131 Msa0463580:exon 45.0%
! TTGAAGTGTTTGGTAGCTGC+GGG - chr3_3:63049113-63049132 Msa0463580:exon 45.0%
! CAAGAGCATGTGTTGTGTTC+GGG - chr3_3:63049137-63049156 Msa0463580:CDS 45.0%
!! GAAGAGTGCGTTTTATGCTC+TGG - chr3_3:63049208-63049227 Msa0463580:intron 45.0%
GGCGAAGATGATTGAGAAGA+TGG - chr3_3:63049229-63049248 Msa0463580:intron 45.0%
!! GGTAATGGAAATTCTGGTGG+TGG - chr3_3:63049257-63049276 Msa0463580:intron 45.0%
!!! GGAAATTCTGGTGGTGGTTT+TGG - chr3_3:63049263-63049282 Msa0463580:intron 45.0%
TGGTTCCCGTATAATTGGAG+TGG + chr3_3:63049518-63049537 None:intergenic 45.0%
CTCCAATTATACGGGAACCA+AGG - chr3_3:63049518-63049537 Msa0463580:intron 45.0%
TGGCAATGGTTGGAGTTATG+TGG - chr3_3:63049552-63049571 Msa0463580:intron 45.0%
AACCAACTGGGAATCCGAAT+TGG - chr3_3:63049679-63049698 Msa0463580:intron 45.0%
ACCAACTGGGAATCCGAATT+GGG - chr3_3:63049680-63049699 Msa0463580:intron 45.0%
ACATAACAGTGGGAATGGAC+AGG + chr3_3:63050147-63050166 None:intergenic 45.0%
ACGACACATAACAGTGGGAA+TGG + chr3_3:63050152-63050171 None:intergenic 45.0%
GTTCGAACGACACATAACAG+TGG + chr3_3:63050158-63050177 None:intergenic 45.0%
! GGTTCTAATAAGGGCAGAAG+TGG - chr3_3:63050273-63050292 Msa0463580:intron 45.0%
TCTTCCGGTCAACCAATTGT+TGG + chr3_3:63050390-63050409 None:intergenic 45.0%
CACATGCACGAAGTGAAAGA+AGG - chr3_3:63050427-63050446 Msa0463580:intron 45.0%
!! GGGCATCGATTCCCAAAATT+TGG + chr3_3:63050453-63050472 None:intergenic 45.0%
AACCTCTATACCCCATAGAG+CGG + chr3_3:63050521-63050540 None:intergenic 45.0%
GGATAAATTTCACCCAGGTC+TGG + chr3_3:63050637-63050656 None:intergenic 45.0%
! GTTTTGTGGGAGGACTTTGT+TGG - chr3_3:63050732-63050751 Msa0463580:five_prime_UTR 45.0%
ACAGGGAAGTGATGTGTTTG+TGG + chr3_3:63050988-63051007 None:intergenic 45.0%
TGCGAAACACTCTCTTGGTT+TGG - chr3_3:63051007-63051026 Msa0463580:intron 45.0%
!! ACACTCTCTTGGTTTGGAAG+AGG - chr3_3:63051013-63051032 Msa0463580:intron 45.0%
TGGAAACTTGCCCATGACAA+AGG - chr3_3:63051242-63051261 Msa0463580:intron 45.0%
!! TTGGCCTTGCAGTAATGTTG+TGG - chr3_3:63051407-63051426 Msa0463580:intron 45.0%
AGAGTGGAACTTGGGACTTA+TGG - chr3_3:63051845-63051864 Msa0463580:intron 45.0%
CTTATGGCTGATCTGGTCAA+TGG - chr3_3:63051861-63051880 Msa0463580:intron 45.0%
TTGACTGATCAACCTGGTTC+AGG + chr3_3:63051943-63051962 None:intergenic 45.0%
!!! GTCGTTTTGACTGATCAACC+TGG + chr3_3:63051949-63051968 None:intergenic 45.0%
TTGATCAGTCAAAACGACCC+TGG - chr3_3:63051951-63051970 Msa0463580:intron 45.0%
GCATGCAATTTCCTCCAGAT+TGG + chr3_3:63052297-63052316 None:intergenic 45.0%
AGAAATGTCCAGATGGCAAC+TGG - chr3_3:63052592-63052611 Msa0463580:intron 45.0%
GAAATGTCCAGATGGCAACT+GGG - chr3_3:63052593-63052612 Msa0463580:intron 45.0%
CTGATCTAGGAACCTATCTC+TGG + chr3_3:63053009-63053028 None:intergenic 45.0%
CAGAGATAGGTTCCTAGATC+AGG - chr3_3:63053007-63053026 Msa0463580:five_prime_UTR 45.0%
! CCATCTTTGGAGGTTGGATT+GGG + chr3_3:63053057-63053076 None:intergenic 45.0%
! ACCATCTTTGGAGGTTGGAT+TGG + chr3_3:63053058-63053077 None:intergenic 45.0%
GGCAATTGAACCATCTTTGG+AGG + chr3_3:63053067-63053086 None:intergenic 45.0%
! AGGTGCTATAATGGTGTGGA+AGG - chr3_3:63053953-63053972 Msa0463580:intron 45.0%
GGTGTGCATATCTATACCTC+AGG + chr3_3:63054635-63054654 None:intergenic 45.0%
ATCCTTCTTCATCCTGCTCT+TGG - chr3_3:63054915-63054934 Msa0463580:five_prime_UTR 45.0%
GCTCGTTTAATGTACATGCC+AGG + chr3_3:63055125-63055144 None:intergenic 45.0%
! TTGCTGTGACAGTTTTACGG+TGG - chr3_3:63055420-63055439 Msa0463580:intron 45.0%
TTACGGTGGTTCCATATCGA+AGG - chr3_3:63055434-63055453 Msa0463580:intron 45.0%
TACGGTGGTTCCATATCGAA+GGG - chr3_3:63055435-63055454 Msa0463580:intron 45.0%
! TAGAGGTTGCAGAGCTCTTT+TGG - chr3_3:63055472-63055491 Msa0463580:intron 45.0%
GTGACTTGACCCTTTATTCC+AGG - chr3_3:63055574-63055593 Msa0463580:intron 45.0%
GACCCTTTATTCCAGGTCAA+TGG - chr3_3:63055581-63055600 Msa0463580:intron 45.0%
GGTGAATCCATACTGCATCA+TGG - chr3_3:63055659-63055678 Msa0463580:intron 45.0%
!! GAATGTCAAGGTGTTGAACG+AGG - chr3_3:63055830-63055849 Msa0463580:intron 45.0%
AACAGTCAGACCCAATGTGT+GGG + chr3_3:63056041-63056060 None:intergenic 45.0%
AAACAGTCAGACCCAATGTG+TGG + chr3_3:63056042-63056061 None:intergenic 45.0%
!! TGACTACTAGGTCGGTTTGA+TGG + chr3_3:63056272-63056291 None:intergenic 45.0%
TGAGTAGGTGACTACTAGGT+CGG + chr3_3:63056280-63056299 None:intergenic 45.0%
AAGCAACGGTTAAGAGACCT+GGG + chr3_3:63056522-63056541 None:intergenic 45.0%
AAAGCAACGGTTAAGAGACC+TGG + chr3_3:63056523-63056542 None:intergenic 45.0%
!! GAAAAGGGTATGATGGACAG+TGG - chr3_3:63056674-63056693 Msa0463580:five_prime_UTR 45.0%
CAGACATCTGATGTGGTTAG+TGG + chr3_3:63056765-63056784 None:intergenic 45.0%
!!! GTTATAATTTTTAAAAAATT+TGG - chr3_3:63052157-63052176 Msa0463580:intron 5.0%
!!! ATTTTATGTATAAATTAATT+TGG - chr3_3:63054660-63054679 Msa0463580:five_prime_UTR 5.0%
CACTTCTTCCTCCTCCTTCA+CGG - chr3_3:63048526-63048545 Msa0463580:three_prime_UTR 50.0%
AGGATATACCGTGAAGGAGG+AGG + chr3_3:63048537-63048556 None:intergenic 50.0%
GAATTATCACCACCACCTCC+CGG - chr3_3:63048894-63048913 Msa0463580:three_prime_UTR 50.0%
AAATTGAATCCGGGAGGTGG+TGG + chr3_3:63048906-63048925 None:intergenic 50.0%
TTCGCGGCGGAAATTGAATC+CGG + chr3_3:63048916-63048935 None:intergenic 50.0%
AGGTGAGTCTGGTGATTTCG+CGG + chr3_3:63048932-63048951 None:intergenic 50.0%
!!! CTTTTGGTCGAGAGTATCGC+AGG + chr3_3:63048976-63048995 None:intergenic 50.0%
! TAGTCCAGCATTTCTGGAGG+AGG + chr3_3:63049045-63049064 None:intergenic 50.0%
! AGCTAGTCCAGCATTTCTGG+AGG + chr3_3:63049048-63049067 None:intergenic 50.0%
CCTAGCTAGTCCAGCATTTC+TGG + chr3_3:63049051-63049070 None:intergenic 50.0%
!! CCAGAAATGCTGGACTAGCT+AGG - chr3_3:63049048-63049067 Msa0463580:three_prime_UTR 50.0%
!! CTAGGGTTTTATCGACGCTG+CGG - chr3_3:63049066-63049085 Msa0463580:three_prime_UTR 50.0%
GTGTTCGGGAGAAACTATGC+CGG - chr3_3:63049151-63049170 Msa0463580:CDS 50.0%
!!! TTCTGGTGGTGGTTTTGGGA+TGG - chr3_3:63049268-63049287 Msa0463580:intron 50.0%
!!! TCTGGTGGTGGTTTTGGGAT+GGG - chr3_3:63049269-63049288 Msa0463580:intron 50.0%
!!! TGGTGGTTTTGGGATGGGTT+TGG - chr3_3:63049274-63049293 Msa0463580:intron 50.0%
!!! TGGTTTTGGGATGGGTTTGG+AGG - chr3_3:63049277-63049296 Msa0463580:intron 50.0%
ACCCAATTCGGATTCCCAGT+TGG + chr3_3:63049684-63049703 None:intergenic 50.0%
CTCTCTTCCACTATCGGGAT+TGG + chr3_3:63049714-63049733 None:intergenic 50.0%
AGCCCCTCACATTTATCTCG+CGG - chr3_3:63049774-63049793 Msa0463580:CDS 50.0%
AGGCCGCGAGATAAATGTGA+GGG + chr3_3:63049780-63049799 None:intergenic 50.0%
TAGGCCGCGAGATAAATGTG+AGG + chr3_3:63049781-63049800 None:intergenic 50.0%
TCAGAAAGGTCAAGCCCAGT+CGG + chr3_3:63050475-63050494 None:intergenic 50.0%
ATGCATCTCAAGCCGCTCTA+TGG - chr3_3:63050506-63050525 Msa0463580:intron 50.0%
TGCATCTCAAGCCGCTCTAT+GGG - chr3_3:63050507-63050526 Msa0463580:intron 50.0%
!! TTCTAGGGTTTGCCAGACCT+GGG - chr3_3:63050622-63050641 Msa0463580:intron 50.0%
!!! CTGCAATGCTGCCGTTTTGT+GGG - chr3_3:63050719-63050738 Msa0463580:five_prime_UTR 50.0%
TGTGGGAGGACTTTGTTGGA+AGG - chr3_3:63050736-63050755 Msa0463580:five_prime_UTR 50.0%
!! CCAAGAGAGTGTTTCGCACA+GGG + chr3_3:63051005-63051024 None:intergenic 50.0%
!! ACCAAGAGAGTGTTTCGCAC+AGG + chr3_3:63051006-63051025 None:intergenic 50.0%
GAATTGGCAGCCTCTTGTTC+CGG - chr3_3:63051139-63051158 Msa0463580:intron 50.0%
CATATGACACCATGACCACC+AGG + chr3_3:63051224-63051243 None:intergenic 50.0%
!! CTGGTGGTCATGGTGTCATA+TGG - chr3_3:63051222-63051241 Msa0463580:intron 50.0%
CAATAACGACGGACCTGACT+TGG + chr3_3:63051316-63051335 None:intergenic 50.0%
GCTGCCACAACATTACTGCA+AGG + chr3_3:63051414-63051433 None:intergenic 50.0%
AGCTACAGATGTAACCCTCC+TGG - chr3_3:63051431-63051450 Msa0463580:intron 50.0%
!! GATCGGTTTGCGTCAAGGAA+AGG - chr3_3:63051464-63051483 Msa0463580:intron 50.0%
GGAATGAAGTGGGGGCAAAA+TGG - chr3_3:63051770-63051789 Msa0463580:five_prime_UTR 50.0%
CTTGGGACTTATGGCTGATC+TGG - chr3_3:63051854-63051873 Msa0463580:intron 50.0%
CTTCTGTTGCACCTGAGACA+CGG + chr3_3:63052551-63052570 None:intergenic 50.0%
CCAGATGGCAACTGGGAATA+CGG - chr3_3:63052600-63052619 Msa0463580:intron 50.0%
CCCAATCCAACCTCCAAAGA+TGG - chr3_3:63053054-63053073 Msa0463580:five_prime_UTR 50.0%
TTACCATCTGCGGAGCTTGT+TGG - chr3_3:63053319-63053338 Msa0463580:intron 50.0%
! TAATTTGCCAGCGTCTCTGG+TGG - chr3_3:63053872-63053891 Msa0463580:intron 50.0%
TGGAGACAAGTCTTTACGCC+AGG - chr3_3:63054137-63054156 Msa0463580:intron 50.0%
! GAGCTCTAATCCAGGTATGC+TGG + chr3_3:63054331-63054350 None:intergenic 50.0%
AGTTGGAGAACCGCACTAGA+TGG - chr3_3:63054409-63054428 Msa0463580:five_prime_UTR 50.0%
! GACACCTGATGGTGCTCTAT+TGG - chr3_3:63054559-63054578 Msa0463580:intron 50.0%
GACCAAGAGCAGGATGAAGA+AGG + chr3_3:63054920-63054939 None:intergenic 50.0%
ATCCTGCTCTTGGTCCTCTT+TGG - chr3_3:63054925-63054944 Msa0463580:five_prime_UTR 50.0%
TCCTGCTCTTGGTCCTCTTT+GGG - chr3_3:63054926-63054945 Msa0463580:five_prime_UTR 50.0%
TGTCTGGTGACTTCCCAAAG+AGG + chr3_3:63054942-63054961 None:intergenic 50.0%
CGTGTCAAAACAAGTACCCC+TGG - chr3_3:63055104-63055123 Msa0463580:intron 50.0%
! AGGTTGCAGAGCTCTTTTGG+CGG - chr3_3:63055475-63055494 Msa0463580:intron 50.0%
! GCTCTTTTGGCGGAATGTTC+AGG - chr3_3:63055485-63055504 Msa0463580:intron 50.0%
ATTCCAGGTCAATGGAAGCC+TGG - chr3_3:63055589-63055608 Msa0463580:intron 50.0%
CCTTTGCCCATGATGCAGTA+TGG + chr3_3:63055669-63055688 None:intergenic 50.0%
CCATACTGCATCATGGGCAA+AGG - chr3_3:63055666-63055685 Msa0463580:intron 50.0%
TTTACCGAAGGCTAGGGATC+AGG + chr3_3:63055751-63055770 None:intergenic 50.0%
GTGCTGCAGATCATACTGCA+TGG - chr3_3:63055912-63055931 Msa0463580:intron 50.0%
CAGGTGAGTAGGTGACTACT+AGG + chr3_3:63056284-63056303 None:intergenic 50.0%
!! GTATGATGGACAGTGGAAGC+TGG - chr3_3:63056681-63056700 Msa0463580:five_prime_UTR 50.0%
GATGTCTGCTGCGTGAATCA+TGG - chr3_3:63056777-63056796 Msa0463580:five_prime_UTR 50.0%
CGGAAATTGAATCCGGGAGG+TGG + chr3_3:63048909-63048928 None:intergenic 55.0%
TCGCGGCGGAAATTGAATCC+GGG + chr3_3:63048915-63048934 None:intergenic 55.0%
TGAGTCTGGTGATTTCGCGG+CGG + chr3_3:63048929-63048948 None:intergenic 55.0%
!! TTGGTCGAGAGTATCGCAGG+CGG + chr3_3:63048973-63048992 None:intergenic 55.0%
GGTTCCTCCTCCAGAAATGC+TGG - chr3_3:63049038-63049057 Msa0463580:three_prime_UTR 55.0%
!! GGTTTTATCGACGCTGCGGT+TGG - chr3_3:63049070-63049089 Msa0463580:three_prime_UTR 55.0%
ATCGACGCTGCGGTTGGATT+CGG - chr3_3:63049076-63049095 Msa0463580:three_prime_UTR 55.0%
GGGAGAAACTATGCCGGAGA+TGG - chr3_3:63049157-63049176 Msa0463580:CDS 55.0%
ATCACGGACGACTCCATCTC+CGG + chr3_3:63049173-63049192 None:intergenic 55.0%
! GTCCGTGATGGCTTCTGGTT+CGG - chr3_3:63049184-63049203 Msa0463580:CDS 55.0%
CACCGAACCAGAAGCCATCA+CGG + chr3_3:63049189-63049208 None:intergenic 55.0%
! AGACGTTGGCGCAAGTTGAG+AGG - chr3_3:63049333-63049352 Msa0463580:intron 55.0%
GGCCGCGAGATAAATGTGAG+GGG + chr3_3:63049779-63049798 None:intergenic 55.0%
! TCGCGACCCATTTTAGACCC+TGG + chr3_3:63049949-63049968 None:intergenic 55.0%
AGAAAGGTCAAGCCCAGTCG+GGG + chr3_3:63050473-63050492 None:intergenic 55.0%
CAGAAAGGTCAAGCCCAGTC+GGG + chr3_3:63050474-63050493 None:intergenic 55.0%
GCATCTCAAGCCGCTCTATG+GGG - chr3_3:63050508-63050527 Msa0463580:intron 55.0%
AGCCGCTCTATGGGGTATAG+AGG - chr3_3:63050516-63050535 Msa0463580:intron 55.0%
CAGGTCTGGCAAACCCTAGA+AGG + chr3_3:63050623-63050642 None:intergenic 55.0%
!! CTTCTAGGGTTTGCCAGACC+TGG - chr3_3:63050621-63050640 Msa0463580:intron 55.0%
CAAAACGGCAGCATTGCAGC+AGG + chr3_3:63050718-63050737 None:intergenic 55.0%
!!! GCTGCAATGCTGCCGTTTTG+TGG - chr3_3:63050718-63050737 Msa0463580:five_prime_UTR 55.0%
!!! CAATGCTGCCGTTTTGTGGG+AGG - chr3_3:63050722-63050741 Msa0463580:five_prime_UTR 55.0%
CCCTGTGCGAAACACTCTCT+TGG - chr3_3:63051002-63051021 Msa0463580:intron 55.0%
CAGCCTCTTGTTCCGGTTGT+CGG - chr3_3:63051146-63051165 Msa0463580:intron 55.0%
! CCATCTTCTGCACCGACAAC+CGG + chr3_3:63051161-63051180 None:intergenic 55.0%
CGGTTGTCGGTGCAGAAGAT+GGG - chr3_3:63051159-63051178 Msa0463580:intron 55.0%
TGCAGAAGATGGGCAGTGGT+TGG - chr3_3:63051169-63051188 Msa0463580:intron 55.0%
! GGCTTGCTCAAGGGACTGAA+CGG + chr3_3:63051203-63051222 None:intergenic 55.0%
TTCAGTCCCTTGAGCAAGCC+TGG - chr3_3:63051203-63051222 Msa0463580:intron 55.0%
! TGACCACCAGGCTTGCTCAA+GGG + chr3_3:63051212-63051231 None:intergenic 55.0%
! ATGACCACCAGGCTTGCTCA+AGG + chr3_3:63051213-63051232 None:intergenic 55.0%
TTGAGCAAGCCTGGTGGTCA+TGG - chr3_3:63051212-63051231 Msa0463580:intron 55.0%
!! TAACCCTCCTGGCCTTAGCA+GGG - chr3_3:63051442-63051461 Msa0463580:intron 55.0%
ACGCAAACCGATCCCTGCTA+AGG + chr3_3:63051457-63051476 None:intergenic 55.0%
CAGCTAGAACAGCCTGAACC+AGG - chr3_3:63051928-63051947 Msa0463580:intron 55.0%
CGTGTCTCAGGTGCAACAGA+AGG - chr3_3:63052549-63052568 Msa0463580:intron 55.0%
CCGTATTCCCAGTTGCCATC+TGG + chr3_3:63052603-63052622 None:intergenic 55.0%
GATCCAACAAGCTCCGCAGA+TGG + chr3_3:63053325-63053344 None:intergenic 55.0%
TCCCAAAGAGGACCAAGAGC+AGG + chr3_3:63054930-63054949 None:intergenic 55.0%
TGACCAGGCTTCCATTGACC+TGG + chr3_3:63055595-63055614 None:intergenic 55.0%
AGTCAGACCCAATGTGTGGG+TGG + chr3_3:63056038-63056057 None:intergenic 55.0%
AAGATCATGCCAGGAAGCCC+AGG - chr3_3:63056502-63056521 Msa0463580:five_prime_UTR 55.0%
GTTAAGAGACCTGGGCTTCC+TGG + chr3_3:63056514-63056533 None:intergenic 55.0%
CACGCAGCAGACATCTGATG+TGG + chr3_3:63056772-63056791 None:intergenic 55.0%
CGGCGGAAATTGAATCCGGG+AGG + chr3_3:63048912-63048931 None:intergenic 60.0%
GGAGATGGAGTCGTCCGTGA+TGG - chr3_3:63049172-63049191 Msa0463580:CDS 60.0%
GAGTCGTCCGTGATGGCTTC+TGG - chr3_3:63049179-63049198 Msa0463580:CDS 60.0%
TTGGGAATCGATGCCCCGAC+TGG - chr3_3:63050457-63050476 Msa0463580:intron 60.0%
TGGGAATCGATGCCCCGACT+GGG - chr3_3:63050458-63050477 Msa0463580:intron 60.0%
CTGTCTGCAGAGCCTCCCAA+AGG + chr3_3:63050658-63050677 None:intergenic 60.0%
GGCAGGCATTCACCAGTGCT+AGG + chr3_3:63050697-63050716 None:intergenic 60.0%
! GCACCGACAACCGGAACAAG+AGG + chr3_3:63051152-63051171 None:intergenic 60.0%
CCGGTTGTCGGTGCAGAAGA+TGG - chr3_3:63051158-63051177 Msa0463580:intron 60.0%
TCGGTGCAGAAGATGGGCAG+TGG - chr3_3:63051165-63051184 Msa0463580:intron 60.0%
AGTCCCTTGAGCAAGCCTGG+TGG - chr3_3:63051206-63051225 Msa0463580:intron 60.0%
GTGCAACTGTGCGCCAAGTC+AGG - chr3_3:63051300-63051319 Msa0463580:intron 60.0%
!! GTAACCCTCCTGGCCTTAGC+AGG - chr3_3:63051441-63051460 Msa0463580:intron 60.0%
GATCCCTGCTAAGGCCAGGA+GGG + chr3_3:63051448-63051467 None:intergenic 60.0%
!! CTCCTGGCCTTAGCAGGGAT+CGG - chr3_3:63051447-63051466 Msa0463580:intron 60.0%
AACCGATCCCTGCTAAGGCC+AGG + chr3_3:63051452-63051471 None:intergenic 60.0%
!! GCAGGGATCGGTTTGCGTCA+AGG - chr3_3:63051459-63051478 Msa0463580:intron 60.0%
GCATCCTGTGACCGTGTCTC+AGG - chr3_3:63052537-63052556 Msa0463580:intron 60.0%
TGCACCTGAGACACGGTCAC+AGG + chr3_3:63052544-63052563 None:intergenic 60.0%
! GCCTCCTGATCCCTAGCCTT+CGG - chr3_3:63055744-63055763 Msa0463580:intron 60.0%
ACCGAAGGCTAGGGATCAGG+AGG + chr3_3:63055748-63055767 None:intergenic 60.0%
TGGACAGTGGAAGCTGGCAC+TGG - chr3_3:63056687-63056706 Msa0463580:five_prime_UTR 60.0%
GGACAGTGGAAGCTGGCACT+GGG - chr3_3:63056688-63056707 Msa0463580:five_prime_UTR 60.0%
GTCACGGAGGGAGGTGAGTC+TGG + chr3_3:63048943-63048962 None:intergenic 65.0%
ACGGCAGCATTGCAGCAGGC+AGG + chr3_3:63050714-63050733 None:intergenic 65.0%
CGATCCCTGCTAAGGCCAGG+AGG + chr3_3:63051449-63051468 None:intergenic 65.0%
CAGTCTGCCACCAGAGACGC+TGG + chr3_3:63053882-63053901 None:intergenic 65.0%
CAGCGTCTCTGGTGGCAGAC+TGG - chr3_3:63053880-63053899 Msa0463580:intron 65.0%
GGCGAGCTTGTCACGGAGGG+AGG + chr3_3:63048952-63048971 None:intergenic 70.0%
GGCGGCGAGCTTGTCACGGA+GGG + chr3_3:63048955-63048974 None:intergenic 70.0%
AGGCGGCGAGCTTGTCACGG+AGG + chr3_3:63048956-63048975 None:intergenic 70.0%
CGCAGGCGGCGAGCTTGTCA+CGG + chr3_3:63048959-63048978 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 63048514 63057162 63048514 ID=Msa0463580;Name=Msa0463580
chr3_3 mRNA 63048514 63057162 63048514 ID=Msa0463580-mRNA-1;Parent=Msa0463580;Name=Msa0463580-mRNA-1;_AED=0.10;_eAED=0.10;_QI=2355|0.8|0.93|0.93|1|1|16|613|87
chr3_3 exon 63048514 63049213 63048514 ID=Msa0463580-mRNA-1:exon:13643;Parent=Msa0463580-mRNA-1
chr3_3 exon 63049657 63049662 63049657 ID=Msa0463580-mRNA-1:exon:13642;Parent=Msa0463580-mRNA-1
chr3_3 exon 63049705 63049867 63049705 ID=Msa0463580-mRNA-1:exon:13641;Parent=Msa0463580-mRNA-1
chr3_3 exon 63050170 63050244 63050170 ID=Msa0463580-mRNA-1:exon:13640;Parent=Msa0463580-mRNA-1
chr3_3 exon 63050711 63050806 63050711 ID=Msa0463580-mRNA-1:exon:13639;Parent=Msa0463580-mRNA-1
chr3_3 exon 63051039 63051116 63051039 ID=Msa0463580-mRNA-1:exon:13638;Parent=Msa0463580-mRNA-1
chr3_3 exon 63051518 63051612 63051518 ID=Msa0463580-mRNA-1:exon:13637;Parent=Msa0463580-mRNA-1
chr3_3 exon 63051702 63051793 63051702 ID=Msa0463580-mRNA-1:exon:13636;Parent=Msa0463580-mRNA-1
chr3_3 exon 63052245 63052403 63052245 ID=Msa0463580-mRNA-1:exon:13635;Parent=Msa0463580-mRNA-1
chr3_3 exon 63052988 63053151 63052988 ID=Msa0463580-mRNA-1:exon:13634;Parent=Msa0463580-mRNA-1
chr3_3 exon 63054191 63054257 63054191 ID=Msa0463580-mRNA-1:exon:13633;Parent=Msa0463580-mRNA-1
chr3_3 exon 63054355 63054527 63054355 ID=Msa0463580-mRNA-1:exon:13632;Parent=Msa0463580-mRNA-1
chr3_3 exon 63054613 63054774 63054613 ID=Msa0463580-mRNA-1:exon:13631;Parent=Msa0463580-mRNA-1
chr3_3 exon 63054899 63055048 63054899 ID=Msa0463580-mRNA-1:exon:13630;Parent=Msa0463580-mRNA-1
chr3_3 exon 63055139 63055319 63055139 ID=Msa0463580-mRNA-1:exon:13629;Parent=Msa0463580-mRNA-1
chr3_3 exon 63056292 63057162 63056292 ID=Msa0463580-mRNA-1:exon:13628;Parent=Msa0463580-mRNA-1
chr3_3 five_prime_UTR 63056292 63057162 63056292 ID=Msa0463580-mRNA-1:five_prime_utr;Parent=Msa0463580-mRNA-1
chr3_3 five_prime_UTR 63055139 63055319 63055139 ID=Msa0463580-mRNA-1:five_prime_utr;Parent=Msa0463580-mRNA-1
chr3_3 five_prime_UTR 63054899 63055048 63054899 ID=Msa0463580-mRNA-1:five_prime_utr;Parent=Msa0463580-mRNA-1
chr3_3 five_prime_UTR 63054613 63054774 63054613 ID=Msa0463580-mRNA-1:five_prime_utr;Parent=Msa0463580-mRNA-1
chr3_3 five_prime_UTR 63054355 63054527 63054355 ID=Msa0463580-mRNA-1:five_prime_utr;Parent=Msa0463580-mRNA-1
chr3_3 five_prime_UTR 63054191 63054257 63054191 ID=Msa0463580-mRNA-1:five_prime_utr;Parent=Msa0463580-mRNA-1
chr3_3 five_prime_UTR 63052988 63053151 63052988 ID=Msa0463580-mRNA-1:five_prime_utr;Parent=Msa0463580-mRNA-1
chr3_3 five_prime_UTR 63052245 63052403 63052245 ID=Msa0463580-mRNA-1:five_prime_utr;Parent=Msa0463580-mRNA-1
chr3_3 five_prime_UTR 63051702 63051793 63051702 ID=Msa0463580-mRNA-1:five_prime_utr;Parent=Msa0463580-mRNA-1
chr3_3 five_prime_UTR 63051518 63051612 63051518 ID=Msa0463580-mRNA-1:five_prime_utr;Parent=Msa0463580-mRNA-1
chr3_3 five_prime_UTR 63051039 63051116 63051039 ID=Msa0463580-mRNA-1:five_prime_utr;Parent=Msa0463580-mRNA-1
chr3_3 five_prime_UTR 63050711 63050806 63050711 ID=Msa0463580-mRNA-1:five_prime_utr;Parent=Msa0463580-mRNA-1
chr3_3 five_prime_UTR 63050178 63050244 63050178 ID=Msa0463580-mRNA-1:five_prime_utr;Parent=Msa0463580-mRNA-1
chr3_3 CDS 63050170 63050177 63050170 ID=Msa0463580-mRNA-1:cds;Parent=Msa0463580-mRNA-1
chr3_3 CDS 63049705 63049867 63049705 ID=Msa0463580-mRNA-1:cds;Parent=Msa0463580-mRNA-1
chr3_3 CDS 63049657 63049662 63049657 ID=Msa0463580-mRNA-1:cds;Parent=Msa0463580-mRNA-1
chr3_3 CDS 63049127 63049213 63049127 ID=Msa0463580-mRNA-1:cds;Parent=Msa0463580-mRNA-1
chr3_3 three_prime_UTR 63048514 63049126 63048514 ID=Msa0463580-mRNA-1:three_prime_utr;Parent=Msa0463580-mRNA-1
Gene Sequence

>Msa0463580

ATGTTCAGGTGTGGAAGATGTAAATTGCAGAATGTCAAGGTGTTGAACGAGGGAATTGATTGGAGTTATGGTGGAAATGTGTATTGGAAACATGATGTGAAAAGGTCTGAGGTGCTGCAGATCATACTGCATGGAAATGCTGAATTTGAAGCTACTGATGTTGTCTTACAGATGCAAGGAAATCATGTATTTGAAGTTCCAGATGGATACAAATTGAAGATCATGCCAGGAAGCCCAGGTCTCTTAACCGTTGCTTTATCATGA
Protein sequence

>Msa0463580

MFRCGRCKLQNVKVLNEGIDWSYGGNVYWKHDVKRSEVLQIILHGNAEFEATDVVLQMQGNHVFEVPDGYKLKIMPGSPGLLTVALS*