Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0682980 | XP_003606453.1 | 96.603 | 677 | 20 | 1 | 2 | 675 | 3 | 679 | 0.0 | 1333 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0682980 | sp|Q6GPP7|TM209_XENLA | 22.273 | 220 | 129 | 5 | 465 | 669 | 366 | 558 | 8.36e-11 | 68.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0682980 | G7JQG0 | 96.603 | 677 | 20 | 1 | 2 | 675 | 3 | 679 | 0.0 | 1333 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0643510 | Msa0682980 | 0.894199 | 3.085686e-75 | -8.615850e-47 |
| Msa0682980 | Msa0683050 | 0.981640 | 4.399558e-153 | -8.615850e-47 |
| Msa0602200 | Msa0682980 | 0.980929 | 2.282062e-151 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0682980 | MtrunA17_Chr4g0029691 | 96.603 | 677 | 20 | 1 | 2 | 675 | 3 | 679 | 0.0 | 1333 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0682980 | AT1G07970.1 | 55.942 | 690 | 274 | 13 | 4 | 675 | 16 | 693 | 0.0 | 746 |
Find 201 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACCTTCGGTTCCTGGTTT+TGG | 0.147160 | 4_4:-45339508 | Msa0682980:CDS |
| AAGTTATCATGTAATGTTTC+TGG | 0.165870 | 4_4:-45336941 | Msa0682980:three_prime_UTR |
| GCCGATCCTGTAACTGTATT+AGG | 0.190566 | 4_4:+45339475 | None:intergenic |
| TCACCACCTTCTCCCTTCTT+AGG | 0.211557 | 4_4:+45339373 | None:intergenic |
| CAATGTCCGGCGTGATAATC+TGG | 0.225087 | 4_4:-45336909 | Msa0682980:three_prime_UTR |
| AGACTTCAGTCCTTAGTTAA+AGG | 0.240452 | 4_4:-45338001 | Msa0682980:CDS |
| CTGCGGAGAGATTAGGGTTT+TGG | 0.242837 | 4_4:+45341212 | None:intergenic |
| ACTCCACCACCTTCGGTTCC+TGG | 0.286526 | 4_4:-45339514 | Msa0682980:CDS |
| AGGAAGGACTCCCAAGAATA+AGG | 0.295101 | 4_4:+45337583 | None:intergenic |
| GAGGGAGATGAGAGCGTGAT+TGG | 0.297125 | 4_4:+45341162 | None:intergenic |
| CATACATTTGGAAGCCTCTA+TGG | 0.297607 | 4_4:+45338240 | None:intergenic |
| TGTGGGGACTGTTGCATATT+AGG | 0.300222 | 4_4:+45338082 | None:intergenic |
| TTTAAGCATTCTACCTGTTA+TGG | 0.304026 | 4_4:-45337145 | Msa0682980:CDS |
| CACCACCTTCTCCCTTCTTA+GGG | 0.313156 | 4_4:+45339374 | None:intergenic |
| TTTCAAGTCCTTGGTCTAAT+AGG | 0.318049 | 4_4:-45339636 | Msa0682980:CDS |
| TGTAATTGATATACCAAGTT+TGG | 0.323780 | 4_4:+45338405 | None:intergenic |
| TTCTCTGGAAACCTATCCTT+TGG | 0.330000 | 4_4:+45337560 | None:intergenic |
| AGAGGACTGCGGAGAGATTA+GGG | 0.332088 | 4_4:+45341206 | None:intergenic |
| GTAAACGGAGAATTTGGATT+TGG | 0.333710 | 4_4:+45341234 | None:intergenic |
| GAGAGGACTGCGGAGAGATT+AGG | 0.336154 | 4_4:+45341205 | None:intergenic |
| GCATCCACTTTGGATGTTCT+AGG | 0.342075 | 4_4:+45337654 | None:intergenic |
| TGCTACCCAGTTCTGTTTAG+TGG | 0.348975 | 4_4:+45341358 | None:intergenic |
| GACTTCAGTCCTTAGTTAAA+GGG | 0.360236 | 4_4:-45338000 | Msa0682980:CDS |
| TCAGGGAAGAACAGCACTTT+GGG | 0.360957 | 4_4:-45337247 | Msa0682980:intron |
| GCGAGCCCTAATACAGTTAC+AGG | 0.361786 | 4_4:-45339481 | Msa0682980:CDS |
| AATTTGAATAGGAGTGCTTC+TGG | 0.363589 | 4_4:-45339763 | Msa0682980:CDS |
| TAACTAAGGACTGAAGTCTT+TGG | 0.365536 | 4_4:+45338005 | None:intergenic |
| TCAGATTCTGTCTCCATAAC+AGG | 0.368488 | 4_4:+45337132 | None:intergenic |
| GTCCCCACAGCAGGGTCCTT+TGG | 0.372286 | 4_4:-45338068 | Msa0682980:CDS |
| CCTTTCTCGCCATTATCTTC+AGG | 0.376921 | 4_4:-45341111 | Msa0682980:intron |
| GACCCACTCCCCTTTAACTA+AGG | 0.377004 | 4_4:+45337991 | None:intergenic |
| GAAGCTGCAACTTTCTCTTC+AGG | 0.378961 | 4_4:-45337432 | Msa0682980:intron |
| GAGAATTTGGATTTGGATTG+TGG | 0.382023 | 4_4:+45341241 | None:intergenic |
| CCGATCCTGTAACTGTATTA+GGG | 0.387249 | 4_4:+45339476 | None:intergenic |
| GATTGAGACAAGTCATGTTC+AGG | 0.391265 | 4_4:-45339215 | Msa0682980:intron |
| AGTGCTTCTGGTCGTTCTAT+TGG | 0.391650 | 4_4:-45339751 | Msa0682980:CDS |
| AGTGAAGCCGAAGGTTGATT+TGG | 0.392715 | 4_4:-45339908 | Msa0682980:CDS |
| CTGTGTCATAAGATTAAAGT+TGG | 0.400152 | 4_4:-45337210 | Msa0682980:CDS |
| AGTCCTAGTCGTCGTGTTGA+TGG | 0.401203 | 4_4:-45339796 | Msa0682980:CDS |
| GCACTGCCACTAAACAGAAC+TGG | 0.403028 | 4_4:-45341364 | Msa0682980:five_prime_UTR |
| GGAAGGACTCCCAAGAATAA+GGG | 0.409561 | 4_4:+45337584 | None:intergenic |
| GTGATGGTTCGAATTTGAAT+AGG | 0.413755 | 4_4:-45339774 | Msa0682980:CDS |
| TTGAAGAATTATGAGTATCT+TGG | 0.415652 | 4_4:-45337767 | Msa0682980:CDS |
| TTTGTTGTTGTAGGGAAAAT+GGG | 0.424575 | 4_4:-45341008 | Msa0682980:intron |
| GAAAGCGGAAGCAGAGAAGA+AGG | 0.431888 | 4_4:+45341135 | None:intergenic |
| GTCCCTTCTGTGCTGCATCC+AGG | 0.432320 | 4_4:-45337515 | Msa0682980:CDS |
| TCACGCCACTGCTCAATTTG+AGG | 0.434711 | 4_4:+45339289 | None:intergenic |
| GCAGTTACCCTTAGTGAAGA+TGG | 0.437512 | 4_4:-45338298 | Msa0682980:CDS |
| GGCAACTTGTCGAGGTCGCC+TGG | 0.441149 | 4_4:-45339730 | Msa0682980:CDS |
| AACTTTACAAGCTGTATAAG+AGG | 0.441528 | 4_4:+45340954 | None:intergenic |
| CTGGAGGCCGTCACAATGTC+CGG | 0.442981 | 4_4:-45336922 | Msa0682980:three_prime_UTR |
| AAGTGGTTACCTGAAGATAA+TGG | 0.448628 | 4_4:+45341102 | None:intergenic |
| TCCTTTGGTTCCTCTCATGC+AGG | 0.452367 | 4_4:-45338053 | Msa0682980:CDS |
| AAGCCATGGTTTCGCTCGCT+AGG | 0.458359 | 4_4:+45341275 | None:intergenic |
| TTCAGGGAAGAACAGCACTT+TGG | 0.460830 | 4_4:-45337248 | Msa0682980:intron |
| ACCGAAGTCTAAACCGCAGC+CGG | 0.462626 | 4_4:-45339860 | Msa0682980:CDS |
| AGCTTCAACCGCTTCTTCCA+TGG | 0.463538 | 4_4:+45339333 | None:intergenic |
| AATCGGTAGTTTCAAGTCCT+TGG | 0.469923 | 4_4:-45339645 | Msa0682980:CDS |
| TTGGGTATGGAGGTATCGTT+AGG | 0.470120 | 4_4:-45337191 | Msa0682980:CDS |
| ATCAATGGATGAACTTGTAG+AGG | 0.470366 | 4_4:+45338342 | None:intergenic |
| CCTGAAGATAATGGCGAGAA+AGG | 0.473170 | 4_4:+45341111 | None:intergenic |
| GAAGGTTGATTTGGTACAAC+CGG | 0.473791 | 4_4:-45339899 | Msa0682980:CDS |
| CAGCTTCTTATCCCAGTACA+AGG | 0.477772 | 4_4:+45337448 | None:intergenic |
| CATAAGATTAAAGTTGGGTA+TGG | 0.478199 | 4_4:-45337204 | Msa0682980:CDS |
| TACTCTTGTGCAGGCCATAG+AGG | 0.478232 | 4_4:-45338254 | Msa0682980:CDS |
| GCTGTCTACTCCACCACCTT+CGG | 0.479663 | 4_4:-45339521 | Msa0682980:CDS |
| ATCAATTACAGTCAATCAAG+TGG | 0.480334 | 4_4:-45338392 | Msa0682980:CDS |
| ATGAACACAGCTGCCAAACT+TGG | 0.480956 | 4_4:-45338418 | Msa0682980:CDS |
| GGTTGTACCAAATCAACCTT+CGG | 0.483656 | 4_4:+45339901 | None:intergenic |
| TGCACAGAGTACAGCAGGAC+TGG | 0.488505 | 4_4:-45339668 | Msa0682980:CDS |
| TATACTAGTAGTTGGAAAGC+AGG | 0.489183 | 4_4:-45337486 | Msa0682980:CDS |
| GACATCCTCACAGGCCTCAA+TGG | 0.490228 | 4_4:+45339424 | None:intergenic |
| GTCTCAATCTTGTGAAGCAA+AGG | 0.494453 | 4_4:+45339229 | None:intergenic |
| AGTCCTGCTGTACTCTGTGC+AGG | 0.494921 | 4_4:+45339670 | None:intergenic |
| GAAAGAATAAGTGAATCTGC+AGG | 0.497798 | 4_4:-45339547 | Msa0682980:CDS |
| CACTGCCACTAAACAGAACT+GGG | 0.499754 | 4_4:-45341363 | Msa0682980:five_prime_UTR |
| CCCGGCTGCGGTTTAGACTT+CGG | 0.501904 | 4_4:+45339859 | None:intergenic |
| TCTGGAAACCTATCCTTTGG+AGG | 0.502203 | 4_4:+45337563 | None:intergenic |
| TATGCAACAGTCCCCACAGC+AGG | 0.503169 | 4_4:-45338077 | Msa0682980:CDS |
| GAAGCAATCCATCTTCACTA+AGG | 0.505272 | 4_4:+45338290 | None:intergenic |
| TCAGCTCGAACACTGCTTTG+AGG | 0.506201 | 4_4:+45337956 | None:intergenic |
| CAAGTCCTTGGTCTAATAGG+AGG | 0.509692 | 4_4:-45339633 | Msa0682980:CDS |
| CCAGTCTTGAGTCTTATCAA+TGG | 0.510525 | 4_4:+45338327 | None:intergenic |
| ACTACGGAGATGTATTTCTC+TGG | 0.512249 | 4_4:+45337545 | None:intergenic |
| GATAACATCAGAGGAAGAGC+TGG | 0.515013 | 4_4:-45339593 | Msa0682980:CDS |
| GCTCCTGGATGCAGCACAGA+AGG | 0.515565 | 4_4:+45337512 | None:intergenic |
| AGTCCTTAGTTAAAGGGGAG+TGG | 0.516301 | 4_4:-45337994 | Msa0682980:CDS |
| ATTATGAGTATCTTGGTAGC+GGG | 0.516620 | 4_4:-45337760 | Msa0682980:CDS |
| GGAGCATGTATACTAGTAGT+TGG | 0.518646 | 4_4:-45337494 | Msa0682980:CDS |
| CTTGAAATCGGCTGATGAAG+TGG | 0.519992 | 4_4:+45339817 | None:intergenic |
| GAGTACAGCAGGACTGGAAT+CGG | 0.520516 | 4_4:-45339662 | Msa0682980:CDS |
| CTTGGGAGTCCTTCCTCCAA+AGG | 0.521528 | 4_4:-45337576 | Msa0682980:CDS |
| TCCACATGTAGCATCCACTT+TGG | 0.523122 | 4_4:+45337644 | None:intergenic |
| TGGAGGTGTTGTTACTCCTA+TGG | 0.525807 | 4_4:-45340001 | Msa0682980:CDS |
| CGACGACTAGGACTTGAAAT+CGG | 0.526183 | 4_4:+45339805 | None:intergenic |
| ACAGGATCGGCTAGTAACTC+TGG | 0.526790 | 4_4:-45339463 | Msa0682980:CDS |
| AGCAGAGAAGAAGGAGAAGA+GGG | 0.527210 | 4_4:+45341144 | None:intergenic |
| AAGCAGAGAAGAAGGAGAAG+AGG | 0.528309 | 4_4:+45341143 | None:intergenic |
| AGCCATGGTTTCGCTCGCTA+GGG | 0.528942 | 4_4:+45341276 | None:intergenic |
| GTTAAAGGGGAGTGGGTCAA+AGG | 0.528973 | 4_4:-45337986 | Msa0682980:CDS |
| TTGTTGGGTGTCGTCTGCAT+TGG | 0.529130 | 4_4:-45340075 | Msa0682980:CDS |
| GGCAATGATACACTGTCTAC+AGG | 0.530242 | 4_4:-45338370 | Msa0682980:CDS |
| GGTGGCTTCTTCAACGACTC+CGG | 0.530803 | 4_4:+45339880 | None:intergenic |
| ATACAAGAGCAAGTGAGAAT+CGG | 0.531779 | 4_4:+45337691 | None:intergenic |
| GAGTCCTTCCTCCAAAGGAT+AGG | 0.531914 | 4_4:-45337571 | Msa0682980:CDS |
| AGGCCTGTGAGGATGTCTCC+AGG | 0.532208 | 4_4:-45339418 | Msa0682980:CDS |
| CAAATTGAGCAGTGGCGTGA+TGG | 0.532927 | 4_4:-45339286 | Msa0682980:CDS |
| AAGATTAAAGTTGGGTATGG+AGG | 0.534394 | 4_4:-45337201 | Msa0682980:CDS |
| GCTGCATTCTACTCTTGTGC+AGG | 0.537134 | 4_4:-45338263 | Msa0682980:CDS |
| TGTGTCATAAGATTAAAGTT+GGG | 0.538533 | 4_4:-45337209 | Msa0682980:CDS |
| CCTTCCTCCACCTATGTCCA+TGG | 0.539185 | 4_4:-45339350 | Msa0682980:CDS |
| CTTATGACACAGAATCAAGA+TGG | 0.542280 | 4_4:+45337221 | None:intergenic |
| GTCCTTAGTTAAAGGGGAGT+GGG | 0.545653 | 4_4:-45337993 | Msa0682980:CDS |
| ATACTCATAATTCTTCAAGC+AGG | 0.545765 | 4_4:+45337772 | None:intergenic |
| GTTCTATTGGCAACTTGTCG+AGG | 0.547249 | 4_4:-45339738 | Msa0682980:CDS |
| ATTGGATGGTTGAAGACTGT+TGG | 0.548223 | 4_4:+45341180 | None:intergenic |
| ACTACTAGTATACATGCTCC+TGG | 0.550196 | 4_4:+45337497 | None:intergenic |
| AAACCAGGAACCGAAGGTGG+TGG | 0.552028 | 4_4:+45339511 | None:intergenic |
| ACTGGGTAGCACATATATCA+TGG | 0.553498 | 4_4:-45341346 | Msa0682980:five_prime_UTR |
| TTACATGATAACTTCAACTG+AGG | 0.553507 | 4_4:+45336950 | None:intergenic |
| TCACCTGCACAGAGTACAGC+AGG | 0.555844 | 4_4:-45339673 | Msa0682980:CDS |
| TGTGCAGGTGATACTACTCC+GGG | 0.556207 | 4_4:+45339685 | None:intergenic |
| ACCACCTTCTCCCTTCTTAG+GGG | 0.557390 | 4_4:+45339375 | None:intergenic |
| GTTGAAGACTGTTGGAGGAG+AGG | 0.560917 | 4_4:+45341188 | None:intergenic |
| AATGTCCGGCGTGATAATCT+GGG | 0.561914 | 4_4:-45336908 | Msa0682980:three_prime_UTR |
| TTAGAATTCGACGCAACCAT+AGG | 0.562026 | 4_4:+45339985 | None:intergenic |
| GGATGGTTGAAGACTGTTGG+AGG | 0.562252 | 4_4:+45341183 | None:intergenic |
| TCAATGGATGAACTTGTAGA+GGG | 0.564545 | 4_4:+45338343 | None:intergenic |
| CCACCTTCTCCCTTCTTAGG+GGG | 0.564768 | 4_4:+45339376 | None:intergenic |
| CATATTAGGTACAAACGAGT+TGG | 0.565530 | 4_4:+45338096 | None:intergenic |
| CCGAAGTCTAAACCGCAGCC+GGG | 0.565733 | 4_4:-45339859 | Msa0682980:CDS |
| TAGATTTCGAAACATAATGC+TGG | 0.566365 | 4_4:-45336780 | Msa0682980:three_prime_UTR |
| GTGGATGCAACGTCTTATGC+TGG | 0.567802 | 4_4:-45337626 | Msa0682980:CDS |
| ACTTCAGTCCTTAGTTAAAG+GGG | 0.568978 | 4_4:-45337999 | Msa0682980:CDS |
| ACCTATGTCCATGGAAGAAG+CGG | 0.569193 | 4_4:-45339341 | Msa0682980:CDS |
| ACCGCTTCTTCCATGGACAT+AGG | 0.570460 | 4_4:+45339340 | None:intergenic |
| AATTCAGAAGAACCCGGCTG+CGG | 0.572345 | 4_4:+45339847 | None:intergenic |
| TCACCATCAACACGACGACT+AGG | 0.572718 | 4_4:+45339793 | None:intergenic |
| AATTATGAGTATCTTGGTAG+CGG | 0.575034 | 4_4:-45337761 | Msa0682980:CDS |
| CTGTGCAGGTGATACTACTC+CGG | 0.575494 | 4_4:+45339684 | None:intergenic |
| AGTCGTCGTGTTGATGGTGA+TGG | 0.576247 | 4_4:-45339790 | Msa0682980:CDS |
| AACCCTAGCGAGCGAAACCA+TGG | 0.578481 | 4_4:-45341278 | Msa0682980:exon |
| GGAACCAAAGGACCCTGCTG+TGG | 0.581478 | 4_4:+45338064 | None:intergenic |
| CCCTAATACAGTTACAGGAT+CGG | 0.581559 | 4_4:-45339476 | Msa0682980:CDS |
| TGGGTATGGAGGTATCGTTA+GGG | 0.581693 | 4_4:-45337190 | Msa0682980:CDS |
| TCATGTCGAATGTTAGCGGA+AGG | 0.582981 | 4_4:+45337076 | None:intergenic |
| GAAACCTATCCTTTGGAGGA+AGG | 0.584282 | 4_4:+45337567 | None:intergenic |
| TCGACACAGTCCTGCATGAG+AGG | 0.588828 | 4_4:+45338043 | None:intergenic |
| GAGATGAGAGCGTGATTGGA+TGG | 0.588995 | 4_4:+45341166 | None:intergenic |
| TTTGAGGATAGACACCCAAA+TGG | 0.589541 | 4_4:+45339305 | None:intergenic |
| GCCGTCATGTCGAATGTTAG+CGG | 0.590582 | 4_4:+45337072 | None:intergenic |
| TTACGTAAAACTAGATATGG+TGG | 0.593722 | 4_4:-45340021 | Msa0682980:CDS |
| AAGTCCTTGGTCTAATAGGA+GGG | 0.595120 | 4_4:-45339632 | Msa0682980:CDS |
| GAACCAAAGGACCCTGCTGT+GGG | 0.596020 | 4_4:+45338065 | None:intergenic |
| AATGGCGAGAAAGGCGAAAG+CGG | 0.596342 | 4_4:+45341120 | None:intergenic |
| GGCGTGATGGACTCAGACAA+TGG | 0.596919 | 4_4:-45339273 | Msa0682980:CDS |
| AAGCAATCCATCTTCACTAA+GGG | 0.597444 | 4_4:+45338291 | None:intergenic |
| ATCGTTAGGGGTATGCATCT+AGG | 0.598489 | 4_4:-45337177 | Msa0682980:CDS |
| TCTTCCATGGACATAGGTGG+AGG | 0.601401 | 4_4:+45339346 | None:intergenic |
| TGGAGGTGAAGAAGAAGCCA+TGG | 0.603690 | 4_4:+45341261 | None:intergenic |
| TCTTCACTAAGGGTAACTGC+TGG | 0.607381 | 4_4:+45338301 | None:intergenic |
| CCAAAACCAGGAACCGAAGG+TGG | 0.610030 | 4_4:+45339508 | None:intergenic |
| CTCCTGGATGCAGCACAGAA+GGG | 0.610089 | 4_4:+45337513 | None:intergenic |
| GAGCCTGGAGACATCCTCAC+AGG | 0.610961 | 4_4:+45339415 | None:intergenic |
| CCATGGACATAGGTGGAGGA+AGG | 0.613851 | 4_4:+45339350 | None:intergenic |
| CTTTCCTAGAACATCCAAAG+TGG | 0.615098 | 4_4:-45337658 | Msa0682980:CDS |
| TGCTAATAAGATAACATCAG+AGG | 0.616471 | 4_4:-45339602 | Msa0682980:CDS |
| AGAAGGGACTGAAGACACTA+CGG | 0.616789 | 4_4:+45337529 | None:intergenic |
| TCCTGCATGAGAGGAACCAA+AGG | 0.618525 | 4_4:+45338052 | None:intergenic |
| AATCCAAAACCAGGAACCGA+AGG | 0.619450 | 4_4:+45339505 | None:intergenic |
| AATGGATGAACTTGTAGAGG+GGG | 0.620948 | 4_4:+45338345 | None:intergenic |
| GAAGGACTCCCAAGAATAAG+GGG | 0.621294 | 4_4:+45337585 | None:intergenic |
| ATGCAACAGTCCCCACAGCA+GGG | 0.630389 | 4_4:-45338076 | Msa0682980:CDS |
| CGTAAAACTAGATATGGTGG+AGG | 0.630602 | 4_4:-45340018 | Msa0682980:CDS |
| GCTTCTTCCATGGACATAGG+TGG | 0.632379 | 4_4:+45339343 | None:intergenic |
| ATACTAGTAGTTGGAAAGCA+GGG | 0.632922 | 4_4:-45337485 | Msa0682980:CDS |
| TCAATTACAGTCAATCAAGT+GGG | 0.636455 | 4_4:-45338391 | Msa0682980:CDS |
| AAAGAATAAGTGAATCTGCA+GGG | 0.638876 | 4_4:-45339546 | Msa0682980:CDS |
| CCATTGATAAGACTCAAGAC+TGG | 0.640774 | 4_4:-45338327 | Msa0682980:CDS |
| TTATCATGTAATGTTTCTGG+AGG | 0.641191 | 4_4:-45336938 | Msa0682980:three_prime_UTR |
| GGGCTCGCTAATCCAAAACC+AGG | 0.642580 | 4_4:+45339496 | None:intergenic |
| CGTCTGCATTGGAACTATGT+TGG | 0.643710 | 4_4:-45340064 | Msa0682980:CDS |
| ACAAGCAATTCAGAAGAACC+CGG | 0.644327 | 4_4:+45339841 | None:intergenic |
| TCCGCTAACATTCGACATGA+CGG | 0.647162 | 4_4:-45337073 | Msa0682980:three_prime_UTR |
| TACACTGTGCAAAGAATCCG+AGG | 0.647375 | 4_4:-45337932 | Msa0682980:intron |
| GGCTGCGGTTTAGACTTCGG+TGG | 0.653097 | 4_4:+45339862 | None:intergenic |
| AAGAGCAAGTGAGAATCGGA+TGG | 0.656585 | 4_4:+45337695 | None:intergenic |
| CATGTCGAATGTTAGCGGAA+GGG | 0.666207 | 4_4:+45337077 | None:intergenic |
| CAATGGATGAACTTGTAGAG+GGG | 0.667361 | 4_4:+45338344 | None:intergenic |
| TTAAAAGACATACACCATTG+AGG | 0.667685 | 4_4:-45339438 | Msa0682980:CDS |
| AATTTGGATTTGGATTGTGG+AGG | 0.671538 | 4_4:+45341244 | None:intergenic |
| TCTATCCTCAAATTGAGCAG+TGG | 0.673697 | 4_4:-45339294 | Msa0682980:CDS |
| TTATGAGTATCTTGGTAGCG+GGG | 0.675109 | 4_4:-45337759 | Msa0682980:CDS |
| TCCAAAGTGGATGCTACATG+TGG | 0.676915 | 4_4:-45337645 | Msa0682980:CDS |
| GGGTATGGAGGTATCGTTAG+GGG | 0.678040 | 4_4:-45337189 | Msa0682980:CDS |
| AACCAAAGGACCCTGCTGTG+GGG | 0.678871 | 4_4:+45338066 | None:intergenic |
| TATCACGCCGGACATTGTGA+CGG | 0.680734 | 4_4:+45336915 | None:intergenic |
| GATGCCCTCCTATTAGACCA+AGG | 0.691355 | 4_4:+45339628 | None:intergenic |
| ATACACCATTGAGGCCTGTG+AGG | 0.694783 | 4_4:-45339429 | Msa0682980:CDS |
| AAGAACCCAGATTATCACGC+CGG | 0.699015 | 4_4:+45336903 | None:intergenic |
| ACTGTTGGAGGAGAGGACTG+CGG | 0.700076 | 4_4:+45341195 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATGAAATTAATTGAA+TGG | + | chr4_4:45337102-45337121 | None:intergenic | 10.0% |
| !!! | TTATTTTGTTTTTAAAAATG+TGG | - | chr4_4:45337986-45338005 | Msa0682980:CDS | 10.0% |
| !!! | TATTTTGTTTTTAAAAATGT+GGG | - | chr4_4:45337987-45338006 | Msa0682980:CDS | 10.0% |
| !! | ATTGTGACAATAATTTAATA+AGG | - | chr4_4:45337555-45337574 | Msa0682980:CDS | 15.0% |
| !! | TTGTGACAATAATTTAATAA+GGG | - | chr4_4:45337556-45337575 | Msa0682980:CDS | 15.0% |
| !!! | TATGTTTGAAGAATTATTTT+TGG | - | chr4_4:45339228-45339247 | Msa0682980:CDS | 15.0% |
| !!! | AATACGAAAATTTTATTAGT+TGG | + | chr4_4:45339703-45339722 | None:intergenic | 15.0% |
| !!! | AATAAAATTTTCGTATTCAT+AGG | - | chr4_4:45339706-45339725 | Msa0682980:CDS | 15.0% |
| !! | AAATTATAAGTACATAGAAT+AGG | + | chr4_4:45340845-45340864 | None:intergenic | 15.0% |
| !! | GTACTTATAATTTATTATCT+TGG | - | chr4_4:45340852-45340871 | Msa0682980:intron | 15.0% |
| !!! | TTGTTTTTTTAGTACAAATT+AGG | + | chr4_4:45341308-45341327 | None:intergenic | 15.0% |
| !!! | ACTTTAACTTGTTTTTGTTT+TGG | - | chr4_4:45337222-45337241 | Msa0682980:CDS | 20.0% |
| !!! | CTTTAACTTGTTTTTGTTTT+GGG | - | chr4_4:45337223-45337242 | Msa0682980:CDS | 20.0% |
| !!! | ATAAATGATTTTGACATGTT+TGG | - | chr4_4:45337273-45337292 | Msa0682980:intron | 20.0% |
| !! | ATTCTACTTTAGTTAGAAAT+TGG | - | chr4_4:45337333-45337352 | Msa0682980:intron | 20.0% |
| !! | CTGTTACACATTTAAAAAAA+AGG | + | chr4_4:45337946-45337965 | None:intergenic | 20.0% |
| !!! | TTTTTACGTAAAACTAGATA+TGG | - | chr4_4:45338125-45338144 | Msa0682980:intron | 20.0% |
| !!! | TGGTCAAAGTAATATTTTTT+AGG | - | chr4_4:45338988-45339007 | Msa0682980:intron | 20.0% |
| !!! | GTAATATTTTTTAGGATACA+TGG | - | chr4_4:45338996-45339015 | Msa0682980:intron | 20.0% |
| !!! | ATATTTCATACTCTTCTTTT+TGG | + | chr4_4:45339372-45339391 | None:intergenic | 20.0% |
| !! | TTATGAATCTATGATATGAT+TGG | - | chr4_4:45339414-45339433 | Msa0682980:CDS | 20.0% |
| !! | AATATGAATCAACATACATT+TGG | + | chr4_4:45339924-45339943 | None:intergenic | 20.0% |
| !! | ATTCATATTCATATGCATAT+TGG | - | chr4_4:45339935-45339954 | Msa0682980:CDS | 20.0% |
| !! | ATGATAAAAAGAATAAGAAG+TGG | - | chr4_4:45340419-45340438 | Msa0682980:intron | 20.0% |
| !! | ACAATATTGAAAGGTTTAAT+AGG | + | chr4_4:45340810-45340829 | None:intergenic | 20.0% |
| !!! | TGGTTTAAAACAATATTGAA+AGG | + | chr4_4:45340819-45340838 | None:intergenic | 20.0% |
| !!! | TTTCATGTTTTGTTGTTGTA+GGG | - | chr4_4:45337133-45337152 | Msa0682980:CDS | 25.0% |
| !!! | TTAGAATTGATTTTGCATCT+AGG | - | chr4_4:45337306-45337325 | Msa0682980:intron | 25.0% |
| !! | ATGATTTTGTAGATTGATAG+TGG | + | chr4_4:45337488-45337507 | None:intergenic | 25.0% |
| ! | TCAACTAGAATCAATTATGT+AGG | - | chr4_4:45337703-45337722 | Msa0682980:CDS | 25.0% |
| !!! | AAGCTGCTTTTATTTTTTCT+GGG | - | chr4_4:45337916-45337935 | Msa0682980:intron | 25.0% |
| ! | TGATTTATTGAACTTCAGAT+TGG | - | chr4_4:45338030-45338049 | Msa0682980:CDS | 25.0% |
| ! | GATTTATTGAACTTCAGATT+GGG | - | chr4_4:45338031-45338050 | Msa0682980:CDS | 25.0% |
| ! | CCATAAAACAAGAAATGATT+AGG | + | chr4_4:45338971-45338990 | None:intergenic | 25.0% |
| !!! | CCTAATCATTTCTTGTTTTA+TGG | - | chr4_4:45338968-45338987 | Msa0682980:intron | 25.0% |
| !! | TAGAGAATGAGTTTTACATT+TGG | - | chr4_4:45339265-45339284 | Msa0682980:CDS | 25.0% |
| ! | TTACTAGGAAAAATTACTCA+AGG | - | chr4_4:45339331-45339350 | Msa0682980:CDS | 25.0% |
| !!! | TTTACTGGTTTTCTTAGTTT+GGG | + | chr4_4:45339557-45339576 | None:intergenic | 25.0% |
| !!! | TTTTACTGGTTTTCTTAGTT+TGG | + | chr4_4:45339558-45339577 | None:intergenic | 25.0% |
| ! | AAGTTCTATGGTATTTATAG+AGG | - | chr4_4:45339629-45339648 | Msa0682980:CDS | 25.0% |
| ! | TGTATCTAACTTGAACTATA+TGG | + | chr4_4:45339656-45339675 | None:intergenic | 25.0% |
| ! | TGTAATTGATATACCAAGTT+TGG | + | chr4_4:45339747-45339766 | None:intergenic | 25.0% |
| ! | TCAGCAAATATAATCAAACT+GGG | + | chr4_4:45339985-45340004 | None:intergenic | 25.0% |
| ! | ATCAGCAAATATAATCAAAC+TGG | + | chr4_4:45339986-45340005 | None:intergenic | 25.0% |
| ! | TGATGAATCTAATGACTAAT+AGG | + | chr4_4:45340269-45340288 | None:intergenic | 25.0% |
| !!! | AAGCTCTAAAAATTTAGACA+AGG | + | chr4_4:45340347-45340366 | None:intergenic | 25.0% |
| ! | TTGAAGAATTATGAGTATCT+TGG | - | chr4_4:45340382-45340401 | Msa0682980:intron | 25.0% |
| ! | TTGGTTCATATAGTAACATT+GGG | + | chr4_4:45340762-45340781 | None:intergenic | 25.0% |
| ! | TAAGTACATAGAATAGGTAT+TGG | + | chr4_4:45340839-45340858 | None:intergenic | 25.0% |
| ! | TGTGTCATAAGATTAAAGTT+GGG | - | chr4_4:45340940-45340959 | Msa0682980:intron | 25.0% |
| ! | AAGTTATCATGTAATGTTTC+TGG | - | chr4_4:45341208-45341227 | Msa0682980:CDS | 25.0% |
| ! | TTTTGAATGTGAGTGATGAA+TGG | + | chr4_4:45337079-45337098 | None:intergenic | 30.0% |
| !!! | CTTTCATGTTTTGTTGTTGT+AGG | - | chr4_4:45337132-45337151 | Msa0682980:CDS | 30.0% |
| !!! | TTTTGTTGTTGTAGGGAAAA+TGG | - | chr4_4:45337140-45337159 | Msa0682980:CDS | 30.0% |
| !! | TTTGTTGTTGTAGGGAAAAT+GGG | - | chr4_4:45337141-45337160 | Msa0682980:CDS | 30.0% |
| AACTTTACAAGCTGTATAAG+AGG | + | chr4_4:45337198-45337217 | None:intergenic | 30.0% | |
| ! | TCACAATAGAAGTGTATGTT+TGG | + | chr4_4:45337542-45337561 | None:intergenic | 30.0% |
| ! | AAGGTAAAGTGATTTGTGTT+AGG | - | chr4_4:45337619-45337638 | Msa0682980:CDS | 30.0% |
| TTGTGTGTATAAACCAATTC+TGG | - | chr4_4:45337658-45337677 | Msa0682980:CDS | 30.0% | |
| !! | GTATAAACCAATTCTGGAAT+CGG | - | chr4_4:45337664-45337683 | Msa0682980:CDS | 30.0% |
| ! | TTCTAGTTGAAGCTAGAATT+TGG | + | chr4_4:45337693-45337712 | None:intergenic | 30.0% |
| !! | AAAATTGATTCGGACATGTT+TGG | + | chr4_4:45337754-45337773 | None:intergenic | 30.0% |
| ! | AAACATGTCCGAATCAATTT+TGG | - | chr4_4:45337753-45337772 | Msa0682980:CDS | 30.0% |
| !!! | GAAGCTGCTTTTATTTTTTC+TGG | - | chr4_4:45337915-45337934 | Msa0682980:intron | 30.0% |
| ! | AAGACACTGCAAATTTTGTT+GGG | - | chr4_4:45338059-45338078 | Msa0682980:CDS | 30.0% |
| TTACGTAAAACTAGATATGG+TGG | - | chr4_4:45338128-45338147 | Msa0682980:intron | 30.0% | |
| ! | AAACATCAGTTAGAGCTTTT+AGG | - | chr4_4:45338218-45338237 | Msa0682980:intron | 30.0% |
| TGCTAATAAGATAACATCAG+AGG | - | chr4_4:45338547-45338566 | Msa0682980:intron | 30.0% | |
| AAAGAATAAGTGAATCTGCA+GGG | - | chr4_4:45338603-45338622 | Msa0682980:intron | 30.0% | |
| TTAAAAGACATACACCATTG+AGG | - | chr4_4:45338711-45338730 | Msa0682980:intron | 30.0% | |
| ! | ACACACTGTCAATATTTTCT+TGG | + | chr4_4:45339105-45339124 | None:intergenic | 30.0% |
| GTTCAAATTGAATTACTGCT+TGG | - | chr4_4:45339126-45339145 | Msa0682980:intron | 30.0% | |
| ! | CTCGTTCTTGTAATACTTTT+TGG | + | chr4_4:45339301-45339320 | None:intergenic | 30.0% |
| TTACAAGAACGAGACTTATT+TGG | - | chr4_4:45339308-45339327 | Msa0682980:CDS | 30.0% | |
| AGGAAAAATTACTCAAGGTA+TGG | - | chr4_4:45339336-45339355 | Msa0682980:CDS | 30.0% | |
| ! | ATCTATGATATGATTGGTCA+TGG | - | chr4_4:45339420-45339439 | Msa0682980:CDS | 30.0% |
| ! | AACCAGTAAAAACCTCATTT+TGG | - | chr4_4:45339567-45339586 | Msa0682980:CDS | 30.0% |
| ! | AACCAAAATGAGGTTTTTAC+TGG | + | chr4_4:45339572-45339591 | None:intergenic | 30.0% |
| TAGAACTTCAACCGTAATAA+TGG | + | chr4_4:45339617-45339636 | None:intergenic | 30.0% | |
| TTATTACGGTTGAAGTTCTA+TGG | - | chr4_4:45339617-45339636 | Msa0682980:CDS | 30.0% | |
| ATCAATTACAGTCAATCAAG+TGG | - | chr4_4:45339757-45339776 | Msa0682980:CDS | 30.0% | |
| TCAATTACAGTCAATCAAGT+GGG | - | chr4_4:45339758-45339777 | Msa0682980:CDS | 30.0% | |
| !! | GGAGTTCATTTTTCTGATAT+TGG | - | chr4_4:45340303-45340322 | Msa0682980:intron | 30.0% |
| !!! | TCTGATATTGGTTTTAATGC+TGG | - | chr4_4:45340315-45340334 | Msa0682980:intron | 30.0% |
| !!! | AAATTTTTAGAGCTTGCTGA+AGG | - | chr4_4:45340352-45340371 | Msa0682980:intron | 30.0% |
| ATACTCATAATTCTTCAAGC+AGG | + | chr4_4:45340380-45340399 | None:intergenic | 30.0% | |
| AATTATGAGTATCTTGGTAG+CGG | - | chr4_4:45340388-45340407 | Msa0682980:intron | 30.0% | |
| TGGTTCATATAGTAACATTG+GGG | + | chr4_4:45340761-45340780 | None:intergenic | 30.0% | |
| ! | GTTGGTTCATATAGTAACAT+TGG | + | chr4_4:45340763-45340782 | None:intergenic | 30.0% |
| GTTCATAGTAAATAGGTTGT+TGG | + | chr4_4:45340781-45340800 | None:intergenic | 30.0% | |
| TGAAAGGTTTAATAGGTTGT+CGG | + | chr4_4:45340803-45340822 | None:intergenic | 30.0% | |
| !!! | AGCTCTGAGATTTATTTTTC+AGG | - | chr4_4:45340884-45340903 | Msa0682980:intron | 30.0% |
| !!! | GCTCTGAGATTTATTTTTCA+GGG | - | chr4_4:45340885-45340904 | Msa0682980:intron | 30.0% |
| CTGTGTCATAAGATTAAAGT+TGG | - | chr4_4:45340939-45340958 | Msa0682980:intron | 30.0% | |
| CATAAGATTAAAGTTGGGTA+TGG | - | chr4_4:45340945-45340964 | Msa0682980:intron | 30.0% | |
| TTTAAGCATTCTACCTGTTA+TGG | - | chr4_4:45341004-45341023 | Msa0682980:intron | 30.0% | |
| TTACATGATAACTTCAACTG+AGG | + | chr4_4:45341202-45341221 | None:intergenic | 30.0% | |
| !! | TTATCATGTAATGTTTCTGG+AGG | - | chr4_4:45341211-45341230 | Msa0682980:CDS | 30.0% |
| !!! | GGTTTTTGAAATGAGGTTTG+AGG | + | chr4_4:45336855-45336874 | None:intergenic | 35.0% |
| AATTTGGATTTGGATTGTGG+AGG | + | chr4_4:45336908-45336927 | None:intergenic | 35.0% | |
| GAGAATTTGGATTTGGATTG+TGG | + | chr4_4:45336911-45336930 | None:intergenic | 35.0% | |
| GTAAACGGAGAATTTGGATT+TGG | + | chr4_4:45336918-45336937 | None:intergenic | 35.0% | |
| !! | GTTTTGGTAAACGGAGAATT+TGG | + | chr4_4:45336924-45336943 | None:intergenic | 35.0% |
| !! | GAGATTAGGGTTTTGGTAAA+CGG | + | chr4_4:45336933-45336952 | None:intergenic | 35.0% |
| AAGTGGTTACCTGAAGATAA+TGG | + | chr4_4:45337050-45337069 | None:intergenic | 35.0% | |
| GTGATGAATGGTGAAAAAAG+TGG | + | chr4_4:45337067-45337086 | None:intergenic | 35.0% | |
| !!! | AACTTGTTTTTGTTTTGGGC+TGG | - | chr4_4:45337227-45337246 | Msa0682980:CDS | 35.0% |
| ! | TCTGACTTAAAGTGAGTTGA+AGG | - | chr4_4:45337600-45337619 | Msa0682980:CDS | 35.0% |
| TAGAGTGGCCAAAATTGATT+CGG | + | chr4_4:45337764-45337783 | None:intergenic | 35.0% | |
| ! | CAAGACACTGCAAATTTTGT+TGG | - | chr4_4:45338058-45338077 | Msa0682980:CDS | 35.0% |
| GTGATGGTTCGAATTTGAAT+AGG | - | chr4_4:45338375-45338394 | Msa0682980:CDS | 35.0% | |
| !! | AATTTGAATAGGAGTGCTTC+TGG | - | chr4_4:45338386-45338405 | Msa0682980:CDS | 35.0% |
| ! | TTTCAAGTCCTTGGTCTAAT+AGG | - | chr4_4:45338513-45338532 | Msa0682980:intron | 35.0% |
| GAAAGAATAAGTGAATCTGC+AGG | - | chr4_4:45338602-45338621 | Msa0682980:intron | 35.0% | |
| ! | GTTGAAGCTTTTGACCATTT+GGG | - | chr4_4:45338830-45338849 | Msa0682980:intron | 35.0% |
| ACGAGACTTATTTGGTTACT+AGG | - | chr4_4:45339316-45339335 | Msa0682980:CDS | 35.0% | |
| ! | GATATGATTGGTCATGGTAA+TGG | - | chr4_4:45339426-45339445 | Msa0682980:CDS | 35.0% |
| ATGGTTAATACTACCCCAAA+AGG | - | chr4_4:45339445-45339464 | Msa0682980:CDS | 35.0% | |
| ! | TTCTCAATGTTCAGCCTTTT+GGG | + | chr4_4:45339462-45339481 | None:intergenic | 35.0% |
| ! | TTTCTCAATGTTCAGCCTTT+TGG | + | chr4_4:45339463-45339482 | None:intergenic | 35.0% |
| ! | AAGAACCCAAAGTTAGGTTT+TGG | - | chr4_4:45339524-45339543 | Msa0682980:CDS | 35.0% |
| GTCATCCAAAACCTAACTTT+GGG | + | chr4_4:45339532-45339551 | None:intergenic | 35.0% | |
| GATTGGAAACAACCAAAATG+AGG | + | chr4_4:45339582-45339601 | None:intergenic | 35.0% | |
| AAGCTTGTGCTCCATTATTA+CGG | - | chr4_4:45339603-45339622 | Msa0682980:CDS | 35.0% | |
| TCAATGGATGAACTTGTAGA+GGG | + | chr4_4:45339809-45339828 | None:intergenic | 35.0% | |
| ATCAATGGATGAACTTGTAG+AGG | + | chr4_4:45339810-45339829 | None:intergenic | 35.0% | |
| AAGCAATCCATCTTCACTAA+GGG | + | chr4_4:45339861-45339880 | None:intergenic | 35.0% | |
| GATTTCTGATATTCTCCTAC+TGG | - | chr4_4:45340013-45340032 | Msa0682980:CDS | 35.0% | |
| CATATTAGGTACAAACGAGT+TGG | + | chr4_4:45340056-45340075 | None:intergenic | 35.0% | |
| TAACTAAGGACTGAAGTCTT+TGG | + | chr4_4:45340147-45340166 | None:intergenic | 35.0% | |
| AGACTTCAGTCCTTAGTTAA+AGG | - | chr4_4:45340148-45340167 | Msa0682980:intron | 35.0% | |
| GACTTCAGTCCTTAGTTAAA+GGG | - | chr4_4:45340149-45340168 | Msa0682980:intron | 35.0% | |
| ACTTCAGTCCTTAGTTAAAG+GGG | - | chr4_4:45340150-45340169 | Msa0682980:intron | 35.0% | |
| ! | ATTATGAGTATCTTGGTAGC+GGG | - | chr4_4:45340389-45340408 | Msa0682980:intron | 35.0% |
| ATACAAGAGCAAGTGAGAAT+CGG | + | chr4_4:45340461-45340480 | None:intergenic | 35.0% | |
| TAGCAAAAACCCCTTATTCT+TGG | - | chr4_4:45340555-45340574 | Msa0682980:intron | 35.0% | |
| AGCAAAAACCCCTTATTCTT+GGG | - | chr4_4:45340556-45340575 | Msa0682980:intron | 35.0% | |
| TATACTAGTAGTTGGAAAGC+AGG | - | chr4_4:45340663-45340682 | Msa0682980:intron | 35.0% | |
| ATACTAGTAGTTGGAAAGCA+GGG | - | chr4_4:45340664-45340683 | Msa0682980:intron | 35.0% | |
| !! | GTTGTCGGTTCATAGTAAAT+AGG | + | chr4_4:45340788-45340807 | None:intergenic | 35.0% |
| CTTATGACACAGAATCAAGA+TGG | + | chr4_4:45340931-45340950 | None:intergenic | 35.0% | |
| AAGATTAAAGTTGGGTATGG+AGG | - | chr4_4:45340948-45340967 | Msa0682980:intron | 35.0% | |
| ACTGGGTAGCACATATATCA+TGG | - | chr4_4:45336803-45336822 | Msa0682980:three_prime_UTR | 40.0% | |
| !!! | TCGCTAGGGTTTTTGAAATG+AGG | + | chr4_4:45336862-45336881 | None:intergenic | 40.0% |
| ATTGGATGGTTGAAGACTGT+TGG | + | chr4_4:45336972-45336991 | None:intergenic | 40.0% | |
| ! | TGGTTGCTTTCGAGTAGAAT+TGG | + | chr4_4:45337734-45337753 | None:intergenic | 40.0% |
| ! | GTTTGGTTACACTTCTAGAG+TGG | + | chr4_4:45337779-45337798 | None:intergenic | 40.0% |
| GTAACCAAACAAGCAGAAGT+TGG | - | chr4_4:45337789-45337808 | Msa0682980:CDS | 40.0% | |
| CAAACCAACTTCTGCTTGTT+TGG | + | chr4_4:45337796-45337815 | None:intergenic | 40.0% | |
| !! | AGCAGAAGTTGGTTTGTGTT+TGG | - | chr4_4:45337800-45337819 | Msa0682980:intron | 40.0% |
| CGTAAAACTAGATATGGTGG+AGG | - | chr4_4:45338131-45338150 | Msa0682980:intron | 40.0% | |
| TTAGAATTCGACGCAACCAT+AGG | + | chr4_4:45338167-45338186 | None:intergenic | 40.0% | |
| GGTTGTACCAAATCAACCTT+CGG | + | chr4_4:45338251-45338270 | None:intergenic | 40.0% | |
| !! | GAAGGTTGATTTGGTACAAC+CGG | - | chr4_4:45338250-45338269 | Msa0682980:CDS | 40.0% |
| ACAAGCAATTCAGAAGAACC+CGG | + | chr4_4:45338311-45338330 | None:intergenic | 40.0% | |
| AGATAAAAAGTCGCTGAACC+AGG | + | chr4_4:45338440-45338459 | None:intergenic | 40.0% | |
| ! | GCGACTTTTTATCTTTCTCC+CGG | - | chr4_4:45338446-45338465 | Msa0682980:intron | 40.0% |
| ! | AATCGGTAGTTTCAAGTCCT+TGG | - | chr4_4:45338504-45338523 | Msa0682980:intron | 40.0% |
| AAGTCCTTGGTCTAATAGGA+GGG | - | chr4_4:45338517-45338536 | Msa0682980:intron | 40.0% | |
| CCGATCCTGTAACTGTATTA+GGG | + | chr4_4:45338676-45338695 | None:intergenic | 40.0% | |
| CCCTAATACAGTTACAGGAT+CGG | - | chr4_4:45338673-45338692 | Msa0682980:intron | 40.0% | |
| ! | AGGGGGAGTCTTAAACTTTT+GGG | + | chr4_4:45338759-45338778 | None:intergenic | 40.0% |
| ! | TAGGGGGAGTCTTAAACTTT+TGG | + | chr4_4:45338760-45338779 | None:intergenic | 40.0% |
| ! | TTTAAGACTCCCCCTAAGAA+GGG | - | chr4_4:45338764-45338783 | Msa0682980:intron | 40.0% |
| ! | GGTTGAAGCTTTTGACCATT+TGG | - | chr4_4:45338829-45338848 | Msa0682980:intron | 40.0% |
| TTTGAGGATAGACACCCAAA+TGG | + | chr4_4:45338847-45338866 | None:intergenic | 40.0% | |
| TCTATCCTCAAATTGAGCAG+TGG | - | chr4_4:45338855-45338874 | Msa0682980:intron | 40.0% | |
| GTCTCAATCTTGTGAAGCAA+AGG | + | chr4_4:45338923-45338942 | None:intergenic | 40.0% | |
| GATTGAGACAAGTCATGTTC+AGG | - | chr4_4:45338934-45338953 | Msa0682980:intron | 40.0% | |
| ! | TCTCAATGTTCAGCCTTTTG+GGG | + | chr4_4:45339461-45339480 | None:intergenic | 40.0% |
| CTTGAATCTTCAGCTCACAA+AGG | - | chr4_4:45339497-45339516 | Msa0682980:CDS | 40.0% | |
| GGCTTAAAGAACCCAAAGTT+AGG | - | chr4_4:45339518-45339537 | Msa0682980:CDS | 40.0% | |
| GGTCATCCAAAACCTAACTT+TGG | + | chr4_4:45339533-45339552 | None:intergenic | 40.0% | |
| !!! | ACTGGTTTTCTTAGTTTGGG+TGG | + | chr4_4:45339554-45339573 | None:intergenic | 40.0% |
| ! | AATGGAGCACAAGCTTTGAT+TGG | + | chr4_4:45339599-45339618 | None:intergenic | 40.0% |
| AATGGATGAACTTGTAGAGG+GGG | + | chr4_4:45339807-45339826 | None:intergenic | 40.0% | |
| CAATGGATGAACTTGTAGAG+GGG | + | chr4_4:45339808-45339827 | None:intergenic | 40.0% | |
| ! | CCAGTCTTGAGTCTTATCAA+TGG | + | chr4_4:45339825-45339844 | None:intergenic | 40.0% |
| CCATTGATAAGACTCAAGAC+TGG | - | chr4_4:45339822-45339841 | Msa0682980:CDS | 40.0% | |
| GAAGCAATCCATCTTCACTA+AGG | + | chr4_4:45339862-45339881 | None:intergenic | 40.0% | |
| CATACATTTGGAAGCCTCTA+TGG | + | chr4_4:45339912-45339931 | None:intergenic | 40.0% | |
| ! | TTCATCAGATTTTCTGCAGC+AGG | - | chr4_4:45340282-45340301 | Msa0682980:intron | 40.0% |
| !! | TTATGAGTATCTTGGTAGCG+GGG | - | chr4_4:45340390-45340409 | Msa0682980:intron | 40.0% |
| CTTTCCTAGAACATCCAAAG+TGG | - | chr4_4:45340491-45340510 | Msa0682980:intron | 40.0% | |
| ! | TTCTCTGGAAACCTATCCTT+TGG | + | chr4_4:45340592-45340611 | None:intergenic | 40.0% |
| ACTACGGAGATGTATTTCTC+TGG | + | chr4_4:45340607-45340626 | None:intergenic | 40.0% | |
| ACTACTAGTATACATGCTCC+TGG | + | chr4_4:45340655-45340674 | None:intergenic | 40.0% | |
| GGAGCATGTATACTAGTAGT+TGG | - | chr4_4:45340655-45340674 | Msa0682980:intron | 40.0% | |
| CAGTACAAGGCAAAAATTGG+GGG | + | chr4_4:45340691-45340710 | None:intergenic | 40.0% | |
| CCAGTACAAGGCAAAAATTG+GGG | + | chr4_4:45340692-45340711 | None:intergenic | 40.0% | |
| CCCAGTACAAGGCAAAAATT+GGG | + | chr4_4:45340693-45340712 | None:intergenic | 40.0% | |
| ! | CCCAATTTTTGCCTTGTACT+GGG | - | chr4_4:45340690-45340709 | Msa0682980:intron | 40.0% |
| TCCCAGTACAAGGCAAAAAT+TGG | + | chr4_4:45340694-45340713 | None:intergenic | 40.0% | |
| TCAGATTCTGTCTCCATAAC+AGG | + | chr4_4:45341020-45341039 | None:intergenic | 40.0% | |
| CACTGCCACTAAACAGAACT+GGG | - | chr4_4:45336786-45336805 | Msa0682980:three_prime_UTR | 45.0% | |
| TGCTACCCAGTTCTGTTTAG+TGG | + | chr4_4:45336794-45336813 | None:intergenic | 45.0% | |
| AGCAGAGAAGAAGGAGAAGA+GGG | + | chr4_4:45337008-45337027 | None:intergenic | 45.0% | |
| AAGCAGAGAAGAAGGAGAAG+AGG | + | chr4_4:45337009-45337028 | None:intergenic | 45.0% | |
| ! | CCTGAAGATAATGGCGAGAA+AGG | + | chr4_4:45337041-45337060 | None:intergenic | 45.0% |
| CCTTTCTCGCCATTATCTTC+AGG | - | chr4_4:45337038-45337057 | Msa0682980:three_prime_UTR | 45.0% | |
| ! | AGTGGCTAGAAGTGAGTTGA+AGG | + | chr4_4:45337470-45337489 | None:intergenic | 45.0% |
| TTGGCTTCCGATTCCAGAAT+TGG | + | chr4_4:45337674-45337693 | None:intergenic | 45.0% | |
| CGTCTGCATTGGAACTATGT+TGG | - | chr4_4:45338085-45338104 | Msa0682980:CDS | 45.0% | |
| !! | TGGAGGTGTTGTTACTCCTA+TGG | - | chr4_4:45338148-45338167 | Msa0682980:intron | 45.0% |
| ! | AGTGAAGCCGAAGGTTGATT+TGG | - | chr4_4:45338241-45338260 | Msa0682980:intron | 45.0% |
| CTTGAAATCGGCTGATGAAG+TGG | + | chr4_4:45338335-45338354 | None:intergenic | 45.0% | |
| CGACGACTAGGACTTGAAAT+CGG | + | chr4_4:45338347-45338366 | None:intergenic | 45.0% | |
| AGTGCTTCTGGTCGTTCTAT+TGG | - | chr4_4:45338398-45338417 | Msa0682980:CDS | 45.0% | |
| GTTCTATTGGCAACTTGTCG+AGG | - | chr4_4:45338411-45338430 | Msa0682980:CDS | 45.0% | |
| CAAGTCCTTGGTCTAATAGG+AGG | - | chr4_4:45338516-45338535 | Msa0682980:intron | 45.0% | |
| GATAACATCAGAGGAAGAGC+TGG | - | chr4_4:45338556-45338575 | Msa0682980:intron | 45.0% | |
| AATCCAAAACCAGGAACCGA+AGG | + | chr4_4:45338647-45338666 | None:intergenic | 45.0% | |
| GCCGATCCTGTAACTGTATT+AGG | + | chr4_4:45338677-45338696 | None:intergenic | 45.0% | |
| !! | GTCTTAAACTTTTGGGAGCC+TGG | + | chr4_4:45338752-45338771 | None:intergenic | 45.0% |
| ! | GTTTAAGACTCCCCCTAAGA+AGG | - | chr4_4:45338763-45338782 | Msa0682980:intron | 45.0% |
| ACCTATGTCCATGGAAGAAG+CGG | - | chr4_4:45338808-45338827 | Msa0682980:intron | 45.0% | |
| ATTTGTACCACACCCTTCCT+TGG | - | chr4_4:45339059-45339078 | Msa0682980:intron | 45.0% | |
| ! | ACATCCCTTTTGCCAAGGAA+GGG | + | chr4_4:45339074-45339093 | None:intergenic | 45.0% |
| ATGAACACAGCTGCCAAACT+TGG | - | chr4_4:45339731-45339750 | Msa0682980:CDS | 45.0% | |
| GGCAATGATACACTGTCTAC+AGG | - | chr4_4:45339779-45339798 | Msa0682980:CDS | 45.0% | |
| TCTTCACTAAGGGTAACTGC+TGG | + | chr4_4:45339851-45339870 | None:intergenic | 45.0% | |
| GCAGTTACCCTTAGTGAAGA+TGG | - | chr4_4:45339851-45339870 | Msa0682980:CDS | 45.0% | |
| GCATGCAAACATGAACCAGT+AGG | + | chr4_4:45340031-45340050 | None:intergenic | 45.0% | |
| TGTGGGGACTGTTGCATATT+AGG | + | chr4_4:45340070-45340089 | None:intergenic | 45.0% | |
| AGTCCTTAGTTAAAGGGGAG+TGG | - | chr4_4:45340155-45340174 | Msa0682980:intron | 45.0% | |
| GTCCTTAGTTAAAGGGGAGT+GGG | - | chr4_4:45340156-45340175 | Msa0682980:intron | 45.0% | |
| TACACTGTGCAAAGAATCCG+AGG | - | chr4_4:45340217-45340236 | Msa0682980:intron | 45.0% | |
| AAGAGCAAGTGAGAATCGGA+TGG | + | chr4_4:45340457-45340476 | None:intergenic | 45.0% | |
| GCATCCACTTTGGATGTTCT+AGG | + | chr4_4:45340498-45340517 | None:intergenic | 45.0% | |
| TCCAAAGTGGATGCTACATG+TGG | - | chr4_4:45340504-45340523 | Msa0682980:intron | 45.0% | |
| TCCACATGTAGCATCCACTT+TGG | + | chr4_4:45340508-45340527 | None:intergenic | 45.0% | |
| GAAGGACTCCCAAGAATAAG+GGG | + | chr4_4:45340567-45340586 | None:intergenic | 45.0% | |
| GGAAGGACTCCCAAGAATAA+GGG | + | chr4_4:45340568-45340587 | None:intergenic | 45.0% | |
| AGGAAGGACTCCCAAGAATA+AGG | + | chr4_4:45340569-45340588 | None:intergenic | 45.0% | |
| ! | GAAACCTATCCTTTGGAGGA+AGG | + | chr4_4:45340585-45340604 | None:intergenic | 45.0% |
| TCTGGAAACCTATCCTTTGG+AGG | + | chr4_4:45340589-45340608 | None:intergenic | 45.0% | |
| AGAAGGGACTGAAGACACTA+CGG | + | chr4_4:45340623-45340642 | None:intergenic | 45.0% | |
| ! | CCCCAATTTTTGCCTTGTAC+TGG | - | chr4_4:45340689-45340708 | Msa0682980:intron | 45.0% |
| CAGCTTCTTATCCCAGTACA+AGG | + | chr4_4:45340704-45340723 | None:intergenic | 45.0% | |
| GAAGCTGCAACTTTCTCTTC+AGG | - | chr4_4:45340717-45340736 | Msa0682980:intron | 45.0% | |
| CTGCAACTTTCTCTTCAGGT+GGG | - | chr4_4:45340721-45340740 | Msa0682980:intron | 45.0% | |
| TAGTAACATTGGGGCTACAG+AGG | + | chr4_4:45340752-45340771 | None:intergenic | 45.0% | |
| TTCAGGGAAGAACAGCACTT+TGG | - | chr4_4:45340901-45340920 | Msa0682980:intron | 45.0% | |
| TCAGGGAAGAACAGCACTTT+GGG | - | chr4_4:45340902-45340921 | Msa0682980:intron | 45.0% | |
| !! | TTGGGTATGGAGGTATCGTT+AGG | - | chr4_4:45340958-45340977 | Msa0682980:CDS | 45.0% |
| !! | TGGGTATGGAGGTATCGTTA+GGG | - | chr4_4:45340959-45340978 | Msa0682980:CDS | 45.0% |
| ! | ATCGTTAGGGGTATGCATCT+AGG | - | chr4_4:45340972-45340991 | Msa0682980:CDS | 45.0% |
| CATGTCGAATGTTAGCGGAA+GGG | + | chr4_4:45341075-45341094 | None:intergenic | 45.0% | |
| TCATGTCGAATGTTAGCGGA+AGG | + | chr4_4:45341076-45341095 | None:intergenic | 45.0% | |
| TCCGCTAACATTCGACATGA+CGG | - | chr4_4:45341076-45341095 | Msa0682980:intron | 45.0% | |
| AATGTCCGGCGTGATAATCT+GGG | - | chr4_4:45341241-45341260 | Msa0682980:CDS | 45.0% | |
| AAGAACCCAGATTATCACGC+CGG | + | chr4_4:45341249-45341268 | None:intergenic | 45.0% | |
| GCACTGCCACTAAACAGAAC+TGG | - | chr4_4:45336785-45336804 | Msa0682980:three_prime_UTR | 50.0% | |
| TGGAGGTGAAGAAGAAGCCA+TGG | + | chr4_4:45336891-45336910 | None:intergenic | 50.0% | |
| ! | CTGCGGAGAGATTAGGGTTT+TGG | + | chr4_4:45336940-45336959 | None:intergenic | 50.0% |
| AGAGGACTGCGGAGAGATTA+GGG | + | chr4_4:45336946-45336965 | None:intergenic | 50.0% | |
| GTTGAAGACTGTTGGAGGAG+AGG | + | chr4_4:45336964-45336983 | None:intergenic | 50.0% | |
| GGATGGTTGAAGACTGTTGG+AGG | + | chr4_4:45336969-45336988 | None:intergenic | 50.0% | |
| ! | GAGATGAGAGCGTGATTGGA+TGG | + | chr4_4:45336986-45337005 | None:intergenic | 50.0% |
| GAAAGCGGAAGCAGAGAAGA+AGG | + | chr4_4:45337017-45337036 | None:intergenic | 50.0% | |
| AATGGCGAGAAAGGCGAAAG+CGG | + | chr4_4:45337032-45337051 | None:intergenic | 50.0% | |
| ! | TTGTTGGGTGTCGTCTGCAT+TGG | - | chr4_4:45338074-45338093 | Msa0682980:CDS | 50.0% |
| !! | GCTTTTAGGAGTGAAGCCGA+AGG | - | chr4_4:45338232-45338251 | Msa0682980:intron | 50.0% |
| AATTCAGAAGAACCCGGCTG+CGG | + | chr4_4:45338305-45338324 | None:intergenic | 50.0% | |
| AGTCCTAGTCGTCGTGTTGA+TGG | - | chr4_4:45338353-45338372 | Msa0682980:CDS | 50.0% | |
| TCACCATCAACACGACGACT+AGG | + | chr4_4:45338359-45338378 | None:intergenic | 50.0% | |
| !! | AGTCGTCGTGTTGATGGTGA+TGG | - | chr4_4:45338359-45338378 | Msa0682980:CDS | 50.0% |
| TGTGCAGGTGATACTACTCC+GGG | + | chr4_4:45338467-45338486 | None:intergenic | 50.0% | |
| CTGTGCAGGTGATACTACTC+CGG | + | chr4_4:45338468-45338487 | None:intergenic | 50.0% | |
| GAGTACAGCAGGACTGGAAT+CGG | - | chr4_4:45338487-45338506 | Msa0682980:intron | 50.0% | |
| GATGCCCTCCTATTAGACCA+AGG | + | chr4_4:45338524-45338543 | None:intergenic | 50.0% | |
| GCGAGCCCTAATACAGTTAC+AGG | - | chr4_4:45338668-45338687 | Msa0682980:intron | 50.0% | |
| ACAGGATCGGCTAGTAACTC+TGG | - | chr4_4:45338686-45338705 | Msa0682980:intron | 50.0% | |
| ATACACCATTGAGGCCTGTG+AGG | - | chr4_4:45338720-45338739 | Msa0682980:intron | 50.0% | |
| ACCACCTTCTCCCTTCTTAG+GGG | + | chr4_4:45338777-45338796 | None:intergenic | 50.0% | |
| CACCACCTTCTCCCTTCTTA+GGG | + | chr4_4:45338778-45338797 | None:intergenic | 50.0% | |
| TCACCACCTTCTCCCTTCTT+AGG | + | chr4_4:45338779-45338798 | None:intergenic | 50.0% | |
| TCTTCCATGGACATAGGTGG+AGG | + | chr4_4:45338806-45338825 | None:intergenic | 50.0% | |
| GCTTCTTCCATGGACATAGG+TGG | + | chr4_4:45338809-45338828 | None:intergenic | 50.0% | |
| ACCGCTTCTTCCATGGACAT+AGG | + | chr4_4:45338812-45338831 | None:intergenic | 50.0% | |
| AGCTTCAACCGCTTCTTCCA+TGG | + | chr4_4:45338819-45338838 | None:intergenic | 50.0% | |
| TCACGCCACTGCTCAATTTG+AGG | + | chr4_4:45338863-45338882 | None:intergenic | 50.0% | |
| CAAATTGAGCAGTGGCGTGA+TGG | - | chr4_4:45338863-45338882 | Msa0682980:intron | 50.0% | |
| CACACCCTTCCTTGGCAAAA+GGG | - | chr4_4:45339067-45339086 | Msa0682980:intron | 50.0% | |
| ! | GACATCCCTTTTGCCAAGGA+AGG | + | chr4_4:45339075-45339094 | None:intergenic | 50.0% |
| GCTGCATTCTACTCTTGTGC+AGG | - | chr4_4:45339886-45339905 | Msa0682980:CDS | 50.0% | |
| TACTCTTGTGCAGGCCATAG+AGG | - | chr4_4:45339895-45339914 | Msa0682980:CDS | 50.0% | |
| ! | TCCTTTGGTTCCTCTCATGC+AGG | - | chr4_4:45340096-45340115 | Msa0682980:intron | 50.0% |
| TCCTGCATGAGAGGAACCAA+AGG | + | chr4_4:45340100-45340119 | None:intergenic | 50.0% | |
| GACCCACTCCCCTTTAACTA+AGG | + | chr4_4:45340161-45340180 | None:intergenic | 50.0% | |
| GTTAAAGGGGAGTGGGTCAA+AGG | - | chr4_4:45340163-45340182 | Msa0682980:intron | 50.0% | |
| TCAGCTCGAACACTGCTTTG+AGG | + | chr4_4:45340196-45340215 | None:intergenic | 50.0% | |
| CTGTGCAAAGAATCCGAGGT+AGG | - | chr4_4:45340221-45340240 | Msa0682980:intron | 50.0% | |
| CCATGATTACGTGCCTACCT+CGG | + | chr4_4:45340237-45340256 | None:intergenic | 50.0% | |
| GTGGATGCAACGTCTTATGC+TGG | - | chr4_4:45340523-45340542 | Msa0682980:intron | 50.0% | |
| GAGTCCTTCCTCCAAAGGAT+AGG | - | chr4_4:45340578-45340597 | Msa0682980:intron | 50.0% | |
| GCTGCAACTTTCTCTTCAGG+TGG | - | chr4_4:45340720-45340739 | Msa0682980:intron | 50.0% | |
| !! | GGGTATGGAGGTATCGTTAG+GGG | - | chr4_4:45340960-45340979 | Msa0682980:CDS | 50.0% |
| GCCGTCATGTCGAATGTTAG+CGG | + | chr4_4:45341080-45341099 | None:intergenic | 50.0% | |
| TATCACGCCGGACATTGTGA+CGG | + | chr4_4:45341237-45341256 | None:intergenic | 50.0% | |
| CAATGTCCGGCGTGATAATC+TGG | - | chr4_4:45341240-45341259 | Msa0682980:CDS | 50.0% | |
| AACCCTAGCGAGCGAAACCA+TGG | - | chr4_4:45336871-45336890 | Msa0682980:three_prime_UTR | 55.0% | |
| AGCCATGGTTTCGCTCGCTA+GGG | + | chr4_4:45336876-45336895 | None:intergenic | 55.0% | |
| AAGCCATGGTTTCGCTCGCT+AGG | + | chr4_4:45336877-45336896 | None:intergenic | 55.0% | |
| GAGAGGACTGCGGAGAGATT+AGG | + | chr4_4:45336947-45336966 | None:intergenic | 55.0% | |
| ACTGTTGGAGGAGAGGACTG+CGG | + | chr4_4:45336957-45336976 | None:intergenic | 55.0% | |
| ! | GAGGGAGATGAGAGCGTGAT+TGG | + | chr4_4:45336990-45337009 | None:intergenic | 55.0% |
| GGTGGCTTCTTCAACGACTC+CGG | + | chr4_4:45338272-45338291 | None:intergenic | 55.0% | |
| ACCGAAGTCTAAACCGCAGC+CGG | - | chr4_4:45338289-45338308 | Msa0682980:CDS | 55.0% | |
| TCACCTGCACAGAGTACAGC+AGG | - | chr4_4:45338476-45338495 | Msa0682980:intron | 55.0% | |
| AGTCCTGCTGTACTCTGTGC+AGG | + | chr4_4:45338482-45338501 | None:intergenic | 55.0% | |
| TGCACAGAGTACAGCAGGAC+TGG | - | chr4_4:45338481-45338500 | Msa0682980:intron | 55.0% | |
| GCTGTCTACTCCACCACCTT+CGG | - | chr4_4:45338628-45338647 | Msa0682980:intron | 55.0% | |
| AAACCAGGAACCGAAGGTGG+TGG | + | chr4_4:45338641-45338660 | None:intergenic | 55.0% | |
| CCAAAACCAGGAACCGAAGG+TGG | + | chr4_4:45338644-45338663 | None:intergenic | 55.0% | |
| ! | CCACCTTCGGTTCCTGGTTT+TGG | - | chr4_4:45338641-45338660 | Msa0682980:intron | 55.0% |
| GGGCTCGCTAATCCAAAACC+AGG | + | chr4_4:45338656-45338675 | None:intergenic | 55.0% | |
| GACATCCTCACAGGCCTCAA+TGG | + | chr4_4:45338728-45338747 | None:intergenic | 55.0% | |
| ACTCCCCCTAAGAAGGGAGA+AGG | - | chr4_4:45338770-45338789 | Msa0682980:intron | 55.0% | |
| CCACCTTCTCCCTTCTTAGG+GGG | + | chr4_4:45338776-45338795 | None:intergenic | 55.0% | |
| CCATGGACATAGGTGGAGGA+AGG | + | chr4_4:45338802-45338821 | None:intergenic | 55.0% | |
| CCTTCCTCCACCTATGTCCA+TGG | - | chr4_4:45338799-45338818 | Msa0682980:intron | 55.0% | |
| !! | GGCGTGATGGACTCAGACAA+TGG | - | chr4_4:45338876-45338895 | Msa0682980:intron | 55.0% |
| ! | CCTTTTGCCAAGGAAGGGTG+TGG | + | chr4_4:45339069-45339088 | None:intergenic | 55.0% |
| CCACACCCTTCCTTGGCAAA+AGG | - | chr4_4:45339066-45339085 | Msa0682980:intron | 55.0% | |
| ! | GCTCGACATCCCTTTTGCCA+AGG | + | chr4_4:45339079-45339098 | None:intergenic | 55.0% |
| TATGCAACAGTCCCCACAGC+AGG | - | chr4_4:45340072-45340091 | Msa0682980:CDS | 55.0% | |
| ATGCAACAGTCCCCACAGCA+GGG | - | chr4_4:45340073-45340092 | Msa0682980:CDS | 55.0% | |
| AACCAAAGGACCCTGCTGTG+GGG | + | chr4_4:45340086-45340105 | None:intergenic | 55.0% | |
| GAACCAAAGGACCCTGCTGT+GGG | + | chr4_4:45340087-45340106 | None:intergenic | 55.0% | |
| TCGACACAGTCCTGCATGAG+AGG | + | chr4_4:45340109-45340128 | None:intergenic | 55.0% | |
| CCGAGGTAGGCACGTAATCA+TGG | - | chr4_4:45340234-45340253 | Msa0682980:intron | 55.0% | |
| CTTGGGAGTCCTTCCTCCAA+AGG | - | chr4_4:45340573-45340592 | Msa0682980:intron | 55.0% | |
| CTCCTGGATGCAGCACAGAA+GGG | + | chr4_4:45340639-45340658 | None:intergenic | 55.0% | |
| GGCTGCGGTTTAGACTTCGG+TGG | + | chr4_4:45338290-45338309 | None:intergenic | 60.0% | |
| CCCGGCTGCGGTTTAGACTT+CGG | + | chr4_4:45338293-45338312 | None:intergenic | 60.0% | |
| CCGAAGTCTAAACCGCAGCC+GGG | - | chr4_4:45338290-45338309 | Msa0682980:CDS | 60.0% | |
| ACTCCACCACCTTCGGTTCC+TGG | - | chr4_4:45338635-45338654 | Msa0682980:intron | 60.0% | |
| AGGCCTGTGAGGATGTCTCC+AGG | - | chr4_4:45338731-45338750 | Msa0682980:intron | 60.0% | |
| GAGCCTGGAGACATCCTCAC+AGG | + | chr4_4:45338737-45338756 | None:intergenic | 60.0% | |
| CCCCCTAAGAAGGGAGAAGG+TGG | - | chr4_4:45338773-45338792 | Msa0682980:intron | 60.0% | |
| GGAACCAAAGGACCCTGCTG+TGG | + | chr4_4:45340088-45340107 | None:intergenic | 60.0% | |
| GTCCCTTCTGTGCTGCATCC+AGG | - | chr4_4:45340634-45340653 | Msa0682980:intron | 60.0% | |
| GCTCCTGGATGCAGCACAGA+AGG | + | chr4_4:45340640-45340659 | None:intergenic | 60.0% | |
| CTGGAGGCCGTCACAATGTC+CGG | - | chr4_4:45341227-45341246 | Msa0682980:CDS | 60.0% | |
| GGCAACTTGTCGAGGTCGCC+TGG | - | chr4_4:45338419-45338438 | Msa0682980:CDS | 65.0% | |
| GTCCCCACAGCAGGGTCCTT+TGG | - | chr4_4:45340081-45340100 | Msa0682980:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 45336780 | 45341391 | 45336780 | ID=Msa0682980;Name=Msa0682980 |
| chr4_4 | mRNA | 45336780 | 45341391 | 45336780 | ID=Msa0682980-mRNA-1;Parent=Msa0682980;Name=Msa0682980-mRNA-1;_AED=0.06;_eAED=0.06;_QI=110|0.83|0.71|1|1|1|7|345|675 |
| chr4_4 | exon | 45336780 | 45337265 | 45336780 | ID=Msa0682980-mRNA-1:exon:10973;Parent=Msa0682980-mRNA-1 |
| chr4_4 | exon | 45337433 | 45337809 | 45337433 | ID=Msa0682980-mRNA-1:exon:10972;Parent=Msa0682980-mRNA-1 |
| chr4_4 | exon | 45337933 | 45338118 | 45337933 | ID=Msa0682980-mRNA-1:exon:10971;Parent=Msa0682980-mRNA-1 |
| chr4_4 | exon | 45338245 | 45338443 | 45338245 | ID=Msa0682980-mRNA-1:exon:10970;Parent=Msa0682980-mRNA-1 |
| chr4_4 | exon | 45339216 | 45340109 | 45339216 | ID=Msa0682980-mRNA-1:exon:10969;Parent=Msa0682980-mRNA-1 |
| chr4_4 | exon | 45340957 | 45341017 | 45340957 | ID=Msa0682980-mRNA-1:exon:10968;Parent=Msa0682980-mRNA-1 |
| chr4_4 | exon | 45341112 | 45341391 | 45341112 | ID=Msa0682980-mRNA-1:exon:10967;Parent=Msa0682980-mRNA-1 |
| chr4_4 | five_prime_UTR | 45341282 | 45341391 | 45341282 | ID=Msa0682980-mRNA-1:five_prime_utr;Parent=Msa0682980-mRNA-1 |
| chr4_4 | CDS | 45341112 | 45341281 | 45341112 | ID=Msa0682980-mRNA-1:cds;Parent=Msa0682980-mRNA-1 |
| chr4_4 | CDS | 45340957 | 45341017 | 45340957 | ID=Msa0682980-mRNA-1:cds;Parent=Msa0682980-mRNA-1 |
| chr4_4 | CDS | 45339216 | 45340109 | 45339216 | ID=Msa0682980-mRNA-1:cds;Parent=Msa0682980-mRNA-1 |
| chr4_4 | CDS | 45338245 | 45338443 | 45338245 | ID=Msa0682980-mRNA-1:cds;Parent=Msa0682980-mRNA-1 |
| chr4_4 | CDS | 45337933 | 45338118 | 45337933 | ID=Msa0682980-mRNA-1:cds;Parent=Msa0682980-mRNA-1 |
| chr4_4 | CDS | 45337433 | 45337809 | 45337433 | ID=Msa0682980-mRNA-1:cds;Parent=Msa0682980-mRNA-1 |
| chr4_4 | CDS | 45337125 | 45337265 | 45337125 | ID=Msa0682980-mRNA-1:cds;Parent=Msa0682980-mRNA-1 |
| chr4_4 | three_prime_UTR | 45336780 | 45337124 | 45336780 | ID=Msa0682980-mRNA-1:three_prime_utr;Parent=Msa0682980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
