Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0690470 | XP_003607336.1 | 83.670 | 643 | 65 | 3 | 1 | 643 | 1 | 603 | 0.0 | 1041 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0690470 | G7JQN1 | 83.670 | 643 | 65 | 3 | 1 | 643 | 1 | 603 | 0.0 | 1041 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0647780 | Msa0690470 | 0.886428 | 3.448924e-72 | -8.615850e-47 |
| Msa0690470 | Msa1041250 | 0.803943 | 2.738928e-49 | -8.615850e-47 |
| Msa0553430 | Msa0690470 | 0.827753 | 1.314395e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0690470 | MtrunA17_Chr4g0039111 | 83.670 | 643 | 65 | 3 | 1 | 643 | 1 | 603 | 0.0 | 1041 |
| Msa0690470 | MtrunA17_Chr4g0039101 | 69.302 | 645 | 174 | 7 | 1 | 643 | 1 | 623 | 0.0 | 851 |
| Msa0690470 | MtrunA17_Chr4g0039091 | 67.816 | 87 | 28 | 0 | 555 | 641 | 1 | 87 | 1.74e-34 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0690470 | AT2G43250.1 | 45.950 | 642 | 313 | 7 | 5 | 638 | 6 | 621 | 0.0 | 534 |
Find 127 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGCTACCTACTTCTTTATT+TGG | 0.169176 | 4_4:-58299467 | Msa0690470:CDS |
| TAAACTAGGGACTGTGTTTC+AGG | 0.190651 | 4_4:+58299635 | None:intergenic |
| TGTTAGGATGGTGTTGAAAA+AGG | 0.228608 | 4_4:-58299078 | Msa0690470:CDS |
| TTGCCTTGGGCTACATTTGC+AGG | 0.246779 | 4_4:-58298084 | Msa0690470:CDS |
| GCAAGGTGCTGCAACTTCTT+TGG | 0.282101 | 4_4:-58299138 | Msa0690470:CDS |
| AGCGTGTTGGCTTCTTGCCT+TGG | 0.304013 | 4_4:-58298098 | Msa0690470:CDS |
| TGGCTATAATGGTCATGTTT+TGG | 0.310822 | 4_4:-58299354 | Msa0690470:CDS |
| GCTCCTGGATTTGCAACTTC+TGG | 0.314815 | 4_4:-58298267 | Msa0690470:CDS |
| AGGTGTTTCGTTGATAAAAT+TGG | 0.315113 | 4_4:-58299434 | Msa0690470:CDS |
| GATGAGTATGAGAGGGTTGC+TGG | 0.316031 | 4_4:-58299407 | Msa0690470:CDS |
| GTCTGTTTCGGAGGCGGGTT+CGG | 0.318325 | 4_4:-58299006 | Msa0690470:CDS |
| GCAACTTCTTTGGCTTCAAT+TGG | 0.322777 | 4_4:-58299128 | Msa0690470:CDS |
| GATGATGATGATAATGATTC+TGG | 0.326584 | 4_4:-58299221 | Msa0690470:CDS |
| CACTGGGATACTCCGCTTCC+TGG | 0.339484 | 4_4:-58298567 | Msa0690470:CDS |
| TTTCGATGAATAAAGATGTT+AGG | 0.339563 | 4_4:-58299094 | Msa0690470:CDS |
| CTTCATGAAAACCGATGATT+TGG | 0.341982 | 4_4:+58298242 | None:intergenic |
| GGTGAGCTTAAAGAGGTTCT+TGG | 0.343809 | 4_4:-58298546 | Msa0690470:CDS |
| AAATCTACGCAAGGCATCTA+AGG | 0.344087 | 4_4:-58297953 | Msa0690470:CDS |
| TCTGTGGTGGCAGTTGGGGC+TGG | 0.365844 | 4_4:-58298447 | Msa0690470:CDS |
| TTGAATTCCACGACCCAAAC+TGG | 0.370222 | 4_4:+58297975 | None:intergenic |
| TGACAGCAAGCAGTTGTTTA+CGG | 0.373345 | 4_4:-58298475 | Msa0690470:CDS |
| CTAGTGTCTTATCAGATATC+AGG | 0.379221 | 4_4:-58298593 | Msa0690470:CDS |
| GGCAGCATCGCAACTTGCAC+AGG | 0.383363 | 4_4:-58298063 | Msa0690470:CDS |
| TCATCTAAAGCTACGGCTCC+TGG | 0.394440 | 4_4:-58298282 | Msa0690470:CDS |
| TCACATATTCTGAAGGTAAC+GGG | 0.398720 | 4_4:-58298515 | Msa0690470:CDS |
| ATGGTTTGAGTTCGTCGAAA+TGG | 0.399823 | 4_4:+58299726 | None:intergenic |
| ATTGAGTACTCAGAGCTTCC+AGG | 0.401163 | 4_4:-58298699 | Msa0690470:CDS |
| AAACTCCGAACCAACATCTT+TGG | 0.402577 | 4_4:+58299316 | None:intergenic |
| GCGTGTTGGCTTCTTGCCTT+GGG | 0.409038 | 4_4:-58298097 | Msa0690470:CDS |
| GAAACGCCTTTCTCGCCAAC+AGG | 0.412208 | 4_4:+58298735 | None:intergenic |
| CGGATAGTAGTTTCTGCATC+TGG | 0.414807 | 4_4:+58298316 | None:intergenic |
| ATGCAGCCTGTTGGCGAGAA+AGG | 0.418562 | 4_4:-58298741 | Msa0690470:CDS |
| ACAAACTGCTTAGTGTGATC+GGG | 0.423948 | 4_4:+58299674 | None:intergenic |
| CGGAACATGATTGTTCTGAT+AGG | 0.424487 | 4_4:+58299594 | None:intergenic |
| CTTTATTTGGTGTTATCAAA+AGG | 0.426684 | 4_4:-58299454 | Msa0690470:CDS |
| CTGTTATTGTTCAAGCTGAT+TGG | 0.431321 | 4_4:-58299535 | Msa0690470:CDS |
| AAAGAGTCTGTTTCGGAGGC+GGG | 0.432385 | 4_4:-58299011 | Msa0690470:CDS |
| GCTTGAACAATAACAGCATC+AGG | 0.435756 | 4_4:+58299542 | None:intergenic |
| ATAGTTCTGTGGTGGCAGTT+GGG | 0.436152 | 4_4:-58298452 | Msa0690470:CDS |
| AAAGGGTTTATCTGAAAATA+CGG | 0.437356 | 4_4:-58299060 | Msa0690470:CDS |
| GATAGTTCTGTGGTGGCAGT+TGG | 0.441768 | 4_4:-58298453 | Msa0690470:CDS |
| GGCTTGATTTACTATGAAGA+TGG | 0.453837 | 4_4:-58298042 | Msa0690470:CDS |
| GGCTGCCAAAGATGTTGGTT+CGG | 0.456595 | 4_4:-58299321 | Msa0690470:CDS |
| TACAAACTGCTTAGTGTGAT+CGG | 0.465388 | 4_4:+58299673 | None:intergenic |
| TCAATTGCCAGTTTGGGTCG+TGG | 0.475526 | 4_4:-58297982 | Msa0690470:CDS |
| GCTCCAGAAGTTGCAAATCC+AGG | 0.476554 | 4_4:+58298264 | None:intergenic |
| TAAGCCCCTCTACGGCAAAT+CGG | 0.478190 | 4_4:+58298787 | None:intergenic |
| GAGAAGAGAGAATGTAAACT+AGG | 0.479814 | 4_4:+58299621 | None:intergenic |
| TTACTATTACCAATCAAAAG+TGG | 0.483777 | 4_4:+58299035 | None:intergenic |
| AGTACGATCTTGAGAGAAGC+TGG | 0.493091 | 4_4:+58298342 | None:intergenic |
| ACTTTCCGATTTGCCGTAGA+GGG | 0.493522 | 4_4:-58298792 | Msa0690470:CDS |
| GTAAACAGTATAAGGACAGC+AGG | 0.493787 | 4_4:-58297880 | Msa0690470:CDS |
| ATTGATGAGTTCACGCGCAT+CGG | 0.501516 | 4_4:+58299574 | None:intergenic |
| TGGCTTCAATTGGTTTGAAG+AGG | 0.502134 | 4_4:-58299118 | Msa0690470:CDS |
| TATATAGACTGTGCAAATGC+AGG | 0.502372 | 4_4:+58298951 | None:intergenic |
| CGACCCAAACTGGCAATTGA+GGG | 0.505588 | 4_4:+58297985 | None:intergenic |
| TAGAATAGCTTTACATGATG+AGG | 0.515895 | 4_4:-58298766 | Msa0690470:CDS |
| GTGTAAACATCACTTGTGCC+TGG | 0.516628 | 4_4:+58298670 | None:intergenic |
| AAAAGAGTCTGTTTCGGAGG+CGG | 0.517124 | 4_4:-58299012 | Msa0690470:CDS |
| GCCTTTGTCAGCGTCGACAT+GGG | 0.518045 | 4_4:+58298381 | None:intergenic |
| GCTTGATTTACTATGAAGAT+GGG | 0.519449 | 4_4:-58298041 | Msa0690470:CDS |
| CCTTGGTTCATCTAAAGCTA+CGG | 0.524603 | 4_4:-58298289 | Msa0690470:CDS |
| TATCCAAGCTACAAAACCTA+TGG | 0.524781 | 4_4:-58299763 | Msa0690470:CDS |
| AAACTACTATCCGTTGCCCT+TGG | 0.529028 | 4_4:-58298306 | Msa0690470:CDS |
| AGCCTTTGTCAGCGTCGACA+TGG | 0.529215 | 4_4:+58298380 | None:intergenic |
| ACGACCCAAACTGGCAATTG+AGG | 0.529521 | 4_4:+58297984 | None:intergenic |
| GTTGCAGCACCTTGCTGCTG+AGG | 0.529964 | 4_4:+58299146 | None:intergenic |
| AGAGCTTCCAGGTGATGTCC+AGG | 0.533423 | 4_4:-58298688 | Msa0690470:CDS |
| TATCAGATATCAGGAAACAC+TGG | 0.536180 | 4_4:-58298584 | Msa0690470:CDS |
| ACTTGTGCCTGGACATCACC+TGG | 0.536457 | 4_4:+58298681 | None:intergenic |
| TAGTTCTGTGGTGGCAGTTG+GGG | 0.537530 | 4_4:-58298451 | Msa0690470:CDS |
| GTACTCAATCTTATTCGACT+TGG | 0.537533 | 4_4:+58298713 | None:intergenic |
| TGGTAGAGATGAGTATGAGA+GGG | 0.538249 | 4_4:-58299414 | Msa0690470:CDS |
| AGAATAGCTTTACATGATGA+GGG | 0.540286 | 4_4:-58298765 | Msa0690470:CDS |
| AGAACCTCTTTAAGCTCACC+AGG | 0.545322 | 4_4:+58298549 | None:intergenic |
| ATAACACCAAATAAAGAAGT+AGG | 0.545666 | 4_4:+58299461 | None:intergenic |
| AGAAGAGAGAATGTAAACTA+GGG | 0.546637 | 4_4:+58299622 | None:intergenic |
| ATGTTGTTGGATGTGAATAG+AGG | 0.547789 | 4_4:-58298852 | Msa0690470:CDS |
| CGTCGACATGGGGACTACCT+TGG | 0.551635 | 4_4:+58298392 | None:intergenic |
| GCTTCCTGGTGAGCTTAAAG+AGG | 0.551773 | 4_4:-58298553 | Msa0690470:CDS |
| GATGAATAAAGATGTTAGGA+TGG | 0.552168 | 4_4:-58299090 | Msa0690470:CDS |
| ACATGCACAGAAGATGTTGT+TGG | 0.554385 | 4_4:-58298865 | Msa0690470:CDS |
| AACTTCTGGAGCCAAATCAT+CGG | 0.562407 | 4_4:-58298253 | Msa0690470:CDS |
| AACGGGGCTAGTTTAAATCA+TGG | 0.563180 | 4_4:-58298498 | Msa0690470:CDS |
| TCTTTAAGCTCACCAGGAAG+CGG | 0.563491 | 4_4:+58298555 | None:intergenic |
| AGCTATTCTAAGCCCCTCTA+CGG | 0.563581 | 4_4:+58298779 | None:intergenic |
| GGCTATGGCAACCTGAGTAA+CGG | 0.563926 | 4_4:+58298191 | None:intergenic |
| AGGCAAAAGATTCAGCGTGT+TGG | 0.567450 | 4_4:-58298111 | Msa0690470:CDS |
| ATCACATATTCTGAAGGTAA+CGG | 0.567859 | 4_4:-58298516 | Msa0690470:CDS |
| GGAGCATCATAACTAGCTGT+TGG | 0.568658 | 4_4:+58298972 | None:intergenic |
| GATGATGATGATGAAGAGGA+TGG | 0.569041 | 4_4:-58299494 | Msa0690470:CDS |
| TTGGTAGAGATGAGTATGAG+AGG | 0.570361 | 4_4:-58299415 | Msa0690470:CDS |
| AGGAGCTTCGTCTCTGACCA+AGG | 0.573466 | 4_4:-58298409 | Msa0690470:CDS |
| TACTTTCCGATTTGCCGTAG+AGG | 0.576011 | 4_4:-58298793 | Msa0690470:CDS |
| TCGAAATGGAGTGTAGAGAA+TGG | 0.577639 | 4_4:+58299740 | None:intergenic |
| GACCCAAACTGGCAATTGAG+GGG | 0.581848 | 4_4:+58297986 | None:intergenic |
| AAAGATTAGAGCCGTTACTC+AGG | 0.587884 | 4_4:-58298202 | Msa0690470:CDS |
| CCCCATGTCGACGCTGACAA+AGG | 0.592575 | 4_4:-58298382 | Msa0690470:CDS |
| TTTAGATGAACCAAGGGCAA+CGG | 0.597102 | 4_4:+58298296 | None:intergenic |
| GTTGTTTACGGATAGTTCTG+TGG | 0.604428 | 4_4:-58298463 | Msa0690470:CDS |
| CTTATCAGTCTGGCTACGAA+TGG | 0.609370 | 4_4:+58298644 | None:intergenic |
| CTGCCTGCAAATGTAGCCCA+AGG | 0.610402 | 4_4:+58298081 | None:intergenic |
| TGATGTTAAGACTGTCTCTG+AGG | 0.611028 | 4_4:-58298820 | Msa0690470:CDS |
| TAAACAGTATAAGGACAGCA+GGG | 0.613425 | 4_4:-58297879 | Msa0690470:CDS |
| AGCATCAACTACTGCCACAA+TGG | 0.614592 | 4_4:+58298614 | None:intergenic |
| GCTAACGCATTACCCATCAA+TGG | 0.615405 | 4_4:+58298888 | None:intergenic |
| AAGGCAGTAATGCAAACAGA+AGG | 0.621943 | 4_4:-58297934 | Msa0690470:CDS |
| CACATATTCTGAAGGTAACG+GGG | 0.625070 | 4_4:-58298514 | Msa0690470:CDS |
| CTTTCCGATTTGCCGTAGAG+GGG | 0.626574 | 4_4:-58298791 | Msa0690470:CDS |
| TGGAATTCAAAATCTACGCA+AGG | 0.628926 | 4_4:-58297962 | Msa0690470:CDS |
| ATCAGATATCAGGAAACACT+GGG | 0.629051 | 4_4:-58298583 | Msa0690470:CDS |
| ACCCAAACTGGCAATTGAGG+GGG | 0.631842 | 4_4:+58297987 | None:intergenic |
| CCTTTGTCAGCGTCGACATG+GGG | 0.632576 | 4_4:+58298382 | None:intergenic |
| GAATTAATCACATATTCTGA+AGG | 0.634590 | 4_4:-58298522 | Msa0690470:CDS |
| GAATAGCTTTACATGATGAG+GGG | 0.637430 | 4_4:-58298764 | Msa0690470:CDS |
| TGATAAGTTTAAAACCATTG+TGG | 0.638774 | 4_4:-58298628 | Msa0690470:CDS |
| GTTTACGGATAGTTCTGTGG+TGG | 0.643321 | 4_4:-58298460 | Msa0690470:CDS |
| CCGTAGCTTTAGATGAACCA+AGG | 0.650188 | 4_4:+58298289 | None:intergenic |
| CAAACTGCTTAGTGTGATCG+GGG | 0.657065 | 4_4:+58299675 | None:intergenic |
| CGTAGCTTTAGATGAACCAA+GGG | 0.659199 | 4_4:+58298290 | None:intergenic |
| GATGAGGGGATGCAGCCTGT+TGG | 0.663325 | 4_4:-58298750 | Msa0690470:CDS |
| GGCACAAGTGATGTTTACAC+AGG | 0.664673 | 4_4:-58298667 | Msa0690470:CDS |
| GTTGGATGTGAATAGAGGAG+AGG | 0.665248 | 4_4:-58298847 | Msa0690470:CDS |
| CAGCATTCTATGACATAATG+CGG | 0.668940 | 4_4:-58298134 | Msa0690470:CDS |
| GGAGTGTAGAGAATGGCCAT+AGG | 0.668959 | 4_4:+58299747 | None:intergenic |
| CATTCTATGACATAATGCGG+AGG | 0.705567 | 4_4:-58298131 | Msa0690470:CDS |
| AAACAGTATAAGGACAGCAG+GGG | 0.706177 | 4_4:-58297878 | Msa0690470:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTCAAAAAATCTCTAAAA+CGG | + | chr4_4:58298475-58298494 | None:intergenic | 15.0% |
| !!! | TATTCAAAAAATCTCTAAAA+CGG | + | chr4_4:58298475-58298494 | None:intergenic | 15.0% |
| !!! | CAAAAGATTCTATTGATTTT+TGG | + | chr4_4:58299750-58299769 | None:intergenic | 20.0% |
| !!! | AATCTTTTGTAAACAGTATA+AGG | - | chr4_4:58299761-58299780 | Msa0690470:CDS | 20.0% |
| !!! | CAAAAGATTCTATTGATTTT+TGG | + | chr4_4:58299750-58299769 | None:intergenic | 20.0% |
| !!! | AATCTTTTGTAAACAGTATA+AGG | - | chr4_4:58299761-58299780 | Msa0690470:CDS | 20.0% |
| !!! | TTGTTTACTAGTTGTTTTGA+TGG | + | chr4_4:58297945-58297964 | None:intergenic | 25.0% |
| ! | ATAACACCAAATAAAGAAGT+AGG | + | chr4_4:58298191-58298210 | None:intergenic | 25.0% |
| !!! | CTTTATTTGGTGTTATCAAA+AGG | - | chr4_4:58298195-58298214 | Msa0690470:CDS | 25.0% |
| ! | TTTCGATGAATAAAGATGTT+AGG | - | chr4_4:58298555-58298574 | Msa0690470:CDS | 25.0% |
| ! | AAAGGGTTTATCTGAAAATA+CGG | - | chr4_4:58298589-58298608 | Msa0690470:CDS | 25.0% |
| ! | TTACTATTACCAATCAAAAG+TGG | + | chr4_4:58298617-58298636 | None:intergenic | 25.0% |
| ! | TAGTAAAAAAGAGTCTGTTT+CGG | - | chr4_4:58298631-58298650 | Msa0690470:CDS | 25.0% |
| !! | ATTTTCGTATTTACCATTGA+TGG | - | chr4_4:58298748-58298767 | Msa0690470:CDS | 25.0% |
| !! | TTTTCGTATTTACCATTGAT+GGG | - | chr4_4:58298749-58298768 | Msa0690470:CDS | 25.0% |
| !! | TGATAAGTTTAAAACCATTG+TGG | - | chr4_4:58299021-58299040 | Msa0690470:CDS | 25.0% |
| ! | GAATTAATCACATATTCTGA+AGG | - | chr4_4:58299127-58299146 | Msa0690470:CDS | 25.0% |
| !!! | TTGTTTACTAGTTGTTTTGA+TGG | + | chr4_4:58297945-58297964 | None:intergenic | 25.0% |
| ! | ATAACACCAAATAAAGAAGT+AGG | + | chr4_4:58298191-58298210 | None:intergenic | 25.0% |
| !!! | CTTTATTTGGTGTTATCAAA+AGG | - | chr4_4:58298195-58298214 | Msa0690470:CDS | 25.0% |
| ! | TTTCGATGAATAAAGATGTT+AGG | - | chr4_4:58298555-58298574 | Msa0690470:CDS | 25.0% |
| ! | AAAGGGTTTATCTGAAAATA+CGG | - | chr4_4:58298589-58298608 | Msa0690470:CDS | 25.0% |
| ! | TTACTATTACCAATCAAAAG+TGG | + | chr4_4:58298617-58298636 | None:intergenic | 25.0% |
| ! | TAGTAAAAAAGAGTCTGTTT+CGG | - | chr4_4:58298631-58298650 | Msa0690470:CDS | 25.0% |
| !! | ATTTTCGTATTTACCATTGA+TGG | - | chr4_4:58298748-58298767 | Msa0690470:CDS | 25.0% |
| !! | TTTTCGTATTTACCATTGAT+GGG | - | chr4_4:58298749-58298768 | Msa0690470:CDS | 25.0% |
| !! | TGATAAGTTTAAAACCATTG+TGG | - | chr4_4:58299021-58299040 | Msa0690470:CDS | 25.0% |
| ! | GAATTAATCACATATTCTGA+AGG | - | chr4_4:58299127-58299146 | Msa0690470:CDS | 25.0% |
| AGAAGAGAGAATGTAAACTA+GGG | + | chr4_4:58298030-58298049 | None:intergenic | 30.0% | |
| ! | AGGTGTTTCGTTGATAAAAT+TGG | - | chr4_4:58298215-58298234 | Msa0690470:CDS | 30.0% |
| !! | TTGCTGGTTATTTTGTTCTT+AGG | - | chr4_4:58298258-58298277 | Msa0690470:CDS | 30.0% |
| !! | TGCTGGTTATTTTGTTCTTA+GGG | - | chr4_4:58298259-58298278 | Msa0690470:CDS | 30.0% |
| ! | TTTGTTCTTAGGGAGATTTT+TGG | - | chr4_4:58298269-58298288 | Msa0690470:CDS | 30.0% |
| !!! | ATTTTTGGTACTGGCTATAA+TGG | - | chr4_4:58298284-58298303 | Msa0690470:CDS | 30.0% |
| ! | GATGATGATGATAATGATTC+TGG | - | chr4_4:58298428-58298447 | Msa0690470:CDS | 30.0% |
| GATGAATAAAGATGTTAGGA+TGG | - | chr4_4:58298559-58298578 | Msa0690470:CDS | 30.0% | |
| ! | TAGAATAGCTTTACATGATG+AGG | - | chr4_4:58298883-58298902 | Msa0690470:CDS | 30.0% |
| ! | AGAATAGCTTTACATGATGA+GGG | - | chr4_4:58298884-58298903 | Msa0690470:CDS | 30.0% |
| !!! | TGGTTTTAAACTTATCAGTC+TGG | + | chr4_4:58299018-58299037 | None:intergenic | 30.0% |
| ! | ATCACATATTCTGAAGGTAA+CGG | - | chr4_4:58299133-58299152 | Msa0690470:CDS | 30.0% |
| !!! | AAAACTAGTTTTTTCAGCAG+AGG | + | chr4_4:58299482-58299501 | None:intergenic | 30.0% |
| !!! | AAACTAGTTTTTCAACTCTG+AGG | - | chr4_4:58299491-58299510 | Msa0690470:CDS | 30.0% |
| GCTTGATTTACTATGAAGAT+GGG | - | chr4_4:58299608-58299627 | Msa0690470:CDS | 30.0% | |
| !!! | TTCTATTGATTTTTGGACTC+TGG | + | chr4_4:58299743-58299762 | None:intergenic | 30.0% |
| AGAAGAGAGAATGTAAACTA+GGG | + | chr4_4:58298030-58298049 | None:intergenic | 30.0% | |
| ! | AGGTGTTTCGTTGATAAAAT+TGG | - | chr4_4:58298215-58298234 | Msa0690470:CDS | 30.0% |
| !! | TTGCTGGTTATTTTGTTCTT+AGG | - | chr4_4:58298258-58298277 | Msa0690470:CDS | 30.0% |
| !! | TGCTGGTTATTTTGTTCTTA+GGG | - | chr4_4:58298259-58298278 | Msa0690470:CDS | 30.0% |
| ! | TTTGTTCTTAGGGAGATTTT+TGG | - | chr4_4:58298269-58298288 | Msa0690470:CDS | 30.0% |
| !!! | ATTTTTGGTACTGGCTATAA+TGG | - | chr4_4:58298284-58298303 | Msa0690470:CDS | 30.0% |
| ! | GATGATGATGATAATGATTC+TGG | - | chr4_4:58298428-58298447 | Msa0690470:CDS | 30.0% |
| GATGAATAAAGATGTTAGGA+TGG | - | chr4_4:58298559-58298578 | Msa0690470:CDS | 30.0% | |
| ! | TAGAATAGCTTTACATGATG+AGG | - | chr4_4:58298883-58298902 | Msa0690470:CDS | 30.0% |
| ! | AGAATAGCTTTACATGATGA+GGG | - | chr4_4:58298884-58298903 | Msa0690470:CDS | 30.0% |
| !!! | TGGTTTTAAACTTATCAGTC+TGG | + | chr4_4:58299018-58299037 | None:intergenic | 30.0% |
| ! | ATCACATATTCTGAAGGTAA+CGG | - | chr4_4:58299133-58299152 | Msa0690470:CDS | 30.0% |
| !!! | AAAACTAGTTTTTTCAGCAG+AGG | + | chr4_4:58299482-58299501 | None:intergenic | 30.0% |
| !!! | AAACTAGTTTTTCAACTCTG+AGG | - | chr4_4:58299491-58299510 | Msa0690470:CDS | 30.0% |
| GCTTGATTTACTATGAAGAT+GGG | - | chr4_4:58299608-58299627 | Msa0690470:CDS | 30.0% | |
| !!! | TTCTATTGATTTTTGGACTC+TGG | + | chr4_4:58299743-58299762 | None:intergenic | 30.0% |
| TATCCAAGCTACAAAACCTA+TGG | - | chr4_4:58297886-58297905 | Msa0690470:CDS | 35.0% | |
| TACAAACTGCTTAGTGTGAT+CGG | + | chr4_4:58297979-58297998 | None:intergenic | 35.0% | |
| GAGAAGAGAGAATGTAAACT+AGG | + | chr4_4:58298031-58298050 | None:intergenic | 35.0% | |
| CTGTTATTGTTCAAGCTGAT+TGG | - | chr4_4:58298114-58298133 | Msa0690470:CDS | 35.0% | |
| ! | TGATGATGATGATGATGAAG+AGG | - | chr4_4:58298151-58298170 | Msa0690470:CDS | 35.0% |
| GAGCTACCTACTTCTTTATT+TGG | - | chr4_4:58298182-58298201 | Msa0690470:CDS | 35.0% | |
| ! | TGGCTATAATGGTCATGTTT+TGG | - | chr4_4:58298295-58298314 | Msa0690470:CDS | 35.0% |
| !!! | TCATGTTTTGGCTGCTAAAA+AGG | - | chr4_4:58298307-58298326 | Msa0690470:CDS | 35.0% |
| CTATCGTCAGAAAAAGTTTC+TGG | + | chr4_4:58298377-58298396 | None:intergenic | 35.0% | |
| ! | TGTTAGGATGGTGTTGAAAA+AGG | - | chr4_4:58298571-58298590 | Msa0690470:CDS | 35.0% |
| ! | GTTAGGATGGTGTTGAAAAA+GGG | - | chr4_4:58298572-58298591 | Msa0690470:CDS | 35.0% |
| !! | AATACGGATCCACTTTTGAT+TGG | - | chr4_4:58298605-58298624 | Msa0690470:CDS | 35.0% |
| TAAAAAAGAGTCTGTTTCGG+AGG | - | chr4_4:58298634-58298653 | Msa0690470:CDS | 35.0% | |
| TATATAGACTGTGCAAATGC+AGG | + | chr4_4:58298701-58298720 | None:intergenic | 35.0% | |
| ATGTTGTTGGATGTGAATAG+AGG | - | chr4_4:58298797-58298816 | Msa0690470:CDS | 35.0% | |
| ! | GAATAGCTTTACATGATGAG+GGG | - | chr4_4:58298885-58298904 | Msa0690470:CDS | 35.0% |
| GTACTCAATCTTATTCGACT+TGG | + | chr4_4:58298939-58298958 | None:intergenic | 35.0% | |
| CTAGTGTCTTATCAGATATC+AGG | - | chr4_4:58299056-58299075 | Msa0690470:CDS | 35.0% | |
| TATCAGATATCAGGAAACAC+TGG | - | chr4_4:58299065-58299084 | Msa0690470:CDS | 35.0% | |
| ATCAGATATCAGGAAACACT+GGG | - | chr4_4:58299066-58299085 | Msa0690470:CDS | 35.0% | |
| ! | TCACATATTCTGAAGGTAAC+GGG | - | chr4_4:58299134-58299153 | Msa0690470:CDS | 35.0% |
| CTTCATGAAAACCGATGATT+TGG | + | chr4_4:58299410-58299429 | None:intergenic | 35.0% | |
| CAGCATTCTATGACATAATG+CGG | - | chr4_4:58299515-58299534 | Msa0690470:CDS | 35.0% | |
| GGCTTGATTTACTATGAAGA+TGG | - | chr4_4:58299607-58299626 | Msa0690470:CDS | 35.0% | |
| TGGAATTCAAAATCTACGCA+AGG | - | chr4_4:58299687-58299706 | Msa0690470:CDS | 35.0% | |
| TAAACAGTATAAGGACAGCA+GGG | - | chr4_4:58299770-58299789 | Msa0690470:CDS | 35.0% | |
| TATCCAAGCTACAAAACCTA+TGG | - | chr4_4:58297886-58297905 | Msa0690470:CDS | 35.0% | |
| TACAAACTGCTTAGTGTGAT+CGG | + | chr4_4:58297979-58297998 | None:intergenic | 35.0% | |
| GAGAAGAGAGAATGTAAACT+AGG | + | chr4_4:58298031-58298050 | None:intergenic | 35.0% | |
| CTGTTATTGTTCAAGCTGAT+TGG | - | chr4_4:58298114-58298133 | Msa0690470:CDS | 35.0% | |
| ! | TGATGATGATGATGATGAAG+AGG | - | chr4_4:58298151-58298170 | Msa0690470:CDS | 35.0% |
| GAGCTACCTACTTCTTTATT+TGG | - | chr4_4:58298182-58298201 | Msa0690470:CDS | 35.0% | |
| ! | TGGCTATAATGGTCATGTTT+TGG | - | chr4_4:58298295-58298314 | Msa0690470:CDS | 35.0% |
| !!! | TCATGTTTTGGCTGCTAAAA+AGG | - | chr4_4:58298307-58298326 | Msa0690470:CDS | 35.0% |
| CTATCGTCAGAAAAAGTTTC+TGG | + | chr4_4:58298377-58298396 | None:intergenic | 35.0% | |
| ! | TGTTAGGATGGTGTTGAAAA+AGG | - | chr4_4:58298571-58298590 | Msa0690470:CDS | 35.0% |
| ! | GTTAGGATGGTGTTGAAAAA+GGG | - | chr4_4:58298572-58298591 | Msa0690470:CDS | 35.0% |
| !! | AATACGGATCCACTTTTGAT+TGG | - | chr4_4:58298605-58298624 | Msa0690470:CDS | 35.0% |
| TAAAAAAGAGTCTGTTTCGG+AGG | - | chr4_4:58298634-58298653 | Msa0690470:CDS | 35.0% | |
| TATATAGACTGTGCAAATGC+AGG | + | chr4_4:58298701-58298720 | None:intergenic | 35.0% | |
| ATGTTGTTGGATGTGAATAG+AGG | - | chr4_4:58298797-58298816 | Msa0690470:CDS | 35.0% | |
| ! | GAATAGCTTTACATGATGAG+GGG | - | chr4_4:58298885-58298904 | Msa0690470:CDS | 35.0% |
| GTACTCAATCTTATTCGACT+TGG | + | chr4_4:58298939-58298958 | None:intergenic | 35.0% | |
| CTAGTGTCTTATCAGATATC+AGG | - | chr4_4:58299056-58299075 | Msa0690470:CDS | 35.0% | |
| TATCAGATATCAGGAAACAC+TGG | - | chr4_4:58299065-58299084 | Msa0690470:CDS | 35.0% | |
| ATCAGATATCAGGAAACACT+GGG | - | chr4_4:58299066-58299085 | Msa0690470:CDS | 35.0% | |
| ! | TCACATATTCTGAAGGTAAC+GGG | - | chr4_4:58299134-58299153 | Msa0690470:CDS | 35.0% |
| CTTCATGAAAACCGATGATT+TGG | + | chr4_4:58299410-58299429 | None:intergenic | 35.0% | |
| CAGCATTCTATGACATAATG+CGG | - | chr4_4:58299515-58299534 | Msa0690470:CDS | 35.0% | |
| GGCTTGATTTACTATGAAGA+TGG | - | chr4_4:58299607-58299626 | Msa0690470:CDS | 35.0% | |
| TGGAATTCAAAATCTACGCA+AGG | - | chr4_4:58299687-58299706 | Msa0690470:CDS | 35.0% | |
| TAAACAGTATAAGGACAGCA+GGG | - | chr4_4:58299770-58299789 | Msa0690470:CDS | 35.0% | |
| TCGAAATGGAGTGTAGAGAA+TGG | + | chr4_4:58297912-58297931 | None:intergenic | 40.0% | |
| ! | ATGGTTTGAGTTCGTCGAAA+TGG | + | chr4_4:58297926-58297945 | None:intergenic | 40.0% |
| ACAAACTGCTTAGTGTGATC+GGG | + | chr4_4:58297978-58297997 | None:intergenic | 40.0% | |
| TAAACTAGGGACTGTGTTTC+AGG | + | chr4_4:58298017-58298036 | None:intergenic | 40.0% | |
| CGGAACATGATTGTTCTGAT+AGG | + | chr4_4:58298058-58298077 | None:intergenic | 40.0% | |
| GCTTGAACAATAACAGCATC+AGG | + | chr4_4:58298110-58298129 | None:intergenic | 40.0% | |
| ! | GATGATGATGATGAAGAGGA+TGG | - | chr4_4:58298155-58298174 | Msa0690470:CDS | 40.0% |
| TTGGTAGAGATGAGTATGAG+AGG | - | chr4_4:58298234-58298253 | Msa0690470:CDS | 40.0% | |
| TGGTAGAGATGAGTATGAGA+GGG | - | chr4_4:58298235-58298254 | Msa0690470:CDS | 40.0% | |
| !!! | CTTAGGGAGATTTTTGGTAC+TGG | - | chr4_4:58298275-58298294 | Msa0690470:CDS | 40.0% |
| AAAAAGGCTGCCAAAGATGT+TGG | - | chr4_4:58298323-58298342 | Msa0690470:CDS | 40.0% | |
| AAACTCCGAACCAACATCTT+TGG | + | chr4_4:58298336-58298355 | None:intergenic | 40.0% | |
| ! | TCGTCAGAAAAAGTTTCTGG+AGG | + | chr4_4:58298374-58298393 | None:intergenic | 40.0% |
| ! | GCAACTTCTTTGGCTTCAAT+TGG | - | chr4_4:58298521-58298540 | Msa0690470:CDS | 40.0% |
| !! | TGGCTTCAATTGGTTTGAAG+AGG | - | chr4_4:58298531-58298550 | Msa0690470:CDS | 40.0% |
| ACATGCACAGAAGATGTTGT+TGG | - | chr4_4:58298784-58298803 | Msa0690470:CDS | 40.0% | |
| TGATGTTAAGACTGTCTCTG+AGG | - | chr4_4:58298829-58298848 | Msa0690470:CDS | 40.0% | |
| ! | CACATATTCTGAAGGTAACG+GGG | - | chr4_4:58299135-58299154 | Msa0690470:CDS | 40.0% |
| !! | AACGGGGCTAGTTTAAATCA+TGG | - | chr4_4:58299151-58299170 | Msa0690470:CDS | 40.0% |
| TGACAGCAAGCAGTTGTTTA+CGG | - | chr4_4:58299174-58299193 | Msa0690470:CDS | 40.0% | |
| ! | GTTGTTTACGGATAGTTCTG+TGG | - | chr4_4:58299186-58299205 | Msa0690470:CDS | 40.0% |
| TTTAGATGAACCAAGGGCAA+CGG | + | chr4_4:58299356-58299375 | None:intergenic | 40.0% | |
| !! | CGTAGCTTTAGATGAACCAA+GGG | + | chr4_4:58299362-58299381 | None:intergenic | 40.0% |
| ! | CCTTGGTTCATCTAAAGCTA+CGG | - | chr4_4:58299360-58299379 | Msa0690470:CDS | 40.0% |
| !! | AACTTCTGGAGCCAAATCAT+CGG | - | chr4_4:58299396-58299415 | Msa0690470:CDS | 40.0% |
| AAAGATTAGAGCCGTTACTC+AGG | - | chr4_4:58299447-58299466 | Msa0690470:CDS | 40.0% | |
| !!! | AGTTTTTTCAGCAGAGGCTA+TGG | + | chr4_4:58299476-58299495 | None:intergenic | 40.0% |
| CATTCTATGACATAATGCGG+AGG | - | chr4_4:58299518-58299537 | Msa0690470:CDS | 40.0% | |
| ! | AAATCTACGCAAGGCATCTA+AGG | - | chr4_4:58299696-58299715 | Msa0690470:CDS | 40.0% |
| AAGGCAGTAATGCAAACAGA+AGG | - | chr4_4:58299715-58299734 | Msa0690470:CDS | 40.0% | |
| GTAAACAGTATAAGGACAGC+AGG | - | chr4_4:58299769-58299788 | Msa0690470:CDS | 40.0% | |
| AAACAGTATAAGGACAGCAG+GGG | - | chr4_4:58299771-58299790 | Msa0690470:CDS | 40.0% | |
| TCGAAATGGAGTGTAGAGAA+TGG | + | chr4_4:58297912-58297931 | None:intergenic | 40.0% | |
| ! | ATGGTTTGAGTTCGTCGAAA+TGG | + | chr4_4:58297926-58297945 | None:intergenic | 40.0% |
| ACAAACTGCTTAGTGTGATC+GGG | + | chr4_4:58297978-58297997 | None:intergenic | 40.0% | |
| TAAACTAGGGACTGTGTTTC+AGG | + | chr4_4:58298017-58298036 | None:intergenic | 40.0% | |
| CGGAACATGATTGTTCTGAT+AGG | + | chr4_4:58298058-58298077 | None:intergenic | 40.0% | |
| GCTTGAACAATAACAGCATC+AGG | + | chr4_4:58298110-58298129 | None:intergenic | 40.0% | |
| ! | GATGATGATGATGAAGAGGA+TGG | - | chr4_4:58298155-58298174 | Msa0690470:CDS | 40.0% |
| TTGGTAGAGATGAGTATGAG+AGG | - | chr4_4:58298234-58298253 | Msa0690470:CDS | 40.0% | |
| TGGTAGAGATGAGTATGAGA+GGG | - | chr4_4:58298235-58298254 | Msa0690470:CDS | 40.0% | |
| !!! | CTTAGGGAGATTTTTGGTAC+TGG | - | chr4_4:58298275-58298294 | Msa0690470:CDS | 40.0% |
| AAAAAGGCTGCCAAAGATGT+TGG | - | chr4_4:58298323-58298342 | Msa0690470:CDS | 40.0% | |
| AAACTCCGAACCAACATCTT+TGG | + | chr4_4:58298336-58298355 | None:intergenic | 40.0% | |
| ! | TCGTCAGAAAAAGTTTCTGG+AGG | + | chr4_4:58298374-58298393 | None:intergenic | 40.0% |
| ! | GCAACTTCTTTGGCTTCAAT+TGG | - | chr4_4:58298521-58298540 | Msa0690470:CDS | 40.0% |
| !! | TGGCTTCAATTGGTTTGAAG+AGG | - | chr4_4:58298531-58298550 | Msa0690470:CDS | 40.0% |
| ACATGCACAGAAGATGTTGT+TGG | - | chr4_4:58298784-58298803 | Msa0690470:CDS | 40.0% | |
| TGATGTTAAGACTGTCTCTG+AGG | - | chr4_4:58298829-58298848 | Msa0690470:CDS | 40.0% | |
| ! | CACATATTCTGAAGGTAACG+GGG | - | chr4_4:58299135-58299154 | Msa0690470:CDS | 40.0% |
| !! | AACGGGGCTAGTTTAAATCA+TGG | - | chr4_4:58299151-58299170 | Msa0690470:CDS | 40.0% |
| TGACAGCAAGCAGTTGTTTA+CGG | - | chr4_4:58299174-58299193 | Msa0690470:CDS | 40.0% | |
| ! | GTTGTTTACGGATAGTTCTG+TGG | - | chr4_4:58299186-58299205 | Msa0690470:CDS | 40.0% |
| TTTAGATGAACCAAGGGCAA+CGG | + | chr4_4:58299356-58299375 | None:intergenic | 40.0% | |
| !! | CGTAGCTTTAGATGAACCAA+GGG | + | chr4_4:58299362-58299381 | None:intergenic | 40.0% |
| ! | CCTTGGTTCATCTAAAGCTA+CGG | - | chr4_4:58299360-58299379 | Msa0690470:CDS | 40.0% |
| !! | AACTTCTGGAGCCAAATCAT+CGG | - | chr4_4:58299396-58299415 | Msa0690470:CDS | 40.0% |
| AAAGATTAGAGCCGTTACTC+AGG | - | chr4_4:58299447-58299466 | Msa0690470:CDS | 40.0% | |
| !!! | AGTTTTTTCAGCAGAGGCTA+TGG | + | chr4_4:58299476-58299495 | None:intergenic | 40.0% |
| CATTCTATGACATAATGCGG+AGG | - | chr4_4:58299518-58299537 | Msa0690470:CDS | 40.0% | |
| ! | AAATCTACGCAAGGCATCTA+AGG | - | chr4_4:58299696-58299715 | Msa0690470:CDS | 40.0% |
| AAGGCAGTAATGCAAACAGA+AGG | - | chr4_4:58299715-58299734 | Msa0690470:CDS | 40.0% | |
| GTAAACAGTATAAGGACAGC+AGG | - | chr4_4:58299769-58299788 | Msa0690470:CDS | 40.0% | |
| AAACAGTATAAGGACAGCAG+GGG | - | chr4_4:58299771-58299790 | Msa0690470:CDS | 40.0% | |
| !! | TGGCCATAGGTTTTGTAGCT+TGG | + | chr4_4:58297892-58297911 | None:intergenic | 45.0% |
| CAAACTGCTTAGTGTGATCG+GGG | + | chr4_4:58297977-58297996 | None:intergenic | 45.0% | |
| ATTGATGAGTTCACGCGCAT+CGG | + | chr4_4:58298078-58298097 | None:intergenic | 45.0% | |
| !!! | AGTTTTGTTCCTCAGCAGCA+AGG | - | chr4_4:58298494-58298513 | Msa0690470:CDS | 45.0% |
| AAAAGAGTCTGTTTCGGAGG+CGG | - | chr4_4:58298637-58298656 | Msa0690470:CDS | 45.0% | |
| ! | GGAGCATCATAACTAGCTGT+TGG | + | chr4_4:58298680-58298699 | None:intergenic | 45.0% |
| GCTAACGCATTACCCATCAA+TGG | + | chr4_4:58298764-58298783 | None:intergenic | 45.0% | |
| GTTGGATGTGAATAGAGGAG+AGG | - | chr4_4:58298802-58298821 | Msa0690470:CDS | 45.0% | |
| ! | TACTTTCCGATTTGCCGTAG+AGG | - | chr4_4:58298856-58298875 | Msa0690470:CDS | 45.0% |
| ! | ACTTTCCGATTTGCCGTAGA+GGG | - | chr4_4:58298857-58298876 | Msa0690470:CDS | 45.0% |
| AGCTATTCTAAGCCCCTCTA+CGG | + | chr4_4:58298873-58298892 | None:intergenic | 45.0% | |
| ATTGAGTACTCAGAGCTTCC+AGG | - | chr4_4:58298950-58298969 | Msa0690470:CDS | 45.0% | |
| GTGTAAACATCACTTGTGCC+TGG | + | chr4_4:58298982-58299001 | None:intergenic | 45.0% | |
| GGCACAAGTGATGTTTACAC+AGG | - | chr4_4:58298982-58299001 | Msa0690470:CDS | 45.0% | |
| CTTATCAGTCTGGCTACGAA+TGG | + | chr4_4:58299008-58299027 | None:intergenic | 45.0% | |
| AGCATCAACTACTGCCACAA+TGG | + | chr4_4:58299038-58299057 | None:intergenic | 45.0% | |
| TCTTTAAGCTCACCAGGAAG+CGG | + | chr4_4:58299097-58299116 | None:intergenic | 45.0% | |
| AGAACCTCTTTAAGCTCACC+AGG | + | chr4_4:58299103-58299122 | None:intergenic | 45.0% | |
| GGTGAGCTTAAAGAGGTTCT+TGG | - | chr4_4:58299103-58299122 | Msa0690470:CDS | 45.0% | |
| ! | GTTTACGGATAGTTCTGTGG+TGG | - | chr4_4:58299189-58299208 | Msa0690470:CDS | 45.0% |
| ! | ATAGTTCTGTGGTGGCAGTT+GGG | - | chr4_4:58299197-58299216 | Msa0690470:CDS | 45.0% |
| AGTACGATCTTGAGAGAAGC+TGG | + | chr4_4:58299310-58299329 | None:intergenic | 45.0% | |
| CGGATAGTAGTTTCTGCATC+TGG | + | chr4_4:58299336-58299355 | None:intergenic | 45.0% | |
| AAACTACTATCCGTTGCCCT+TGG | - | chr4_4:58299343-58299362 | Msa0690470:CDS | 45.0% | |
| !! | CCGTAGCTTTAGATGAACCA+AGG | + | chr4_4:58299363-58299382 | None:intergenic | 45.0% |
| AGGCAAAAGATTCAGCGTGT+TGG | - | chr4_4:58299538-58299557 | Msa0690470:CDS | 45.0% | |
| TTGAATTCCACGACCCAAAC+TGG | + | chr4_4:58299677-58299696 | None:intergenic | 45.0% | |
| !! | TGGCCATAGGTTTTGTAGCT+TGG | + | chr4_4:58297892-58297911 | None:intergenic | 45.0% |
| CAAACTGCTTAGTGTGATCG+GGG | + | chr4_4:58297977-58297996 | None:intergenic | 45.0% | |
| ATTGATGAGTTCACGCGCAT+CGG | + | chr4_4:58298078-58298097 | None:intergenic | 45.0% | |
| !!! | AGTTTTGTTCCTCAGCAGCA+AGG | - | chr4_4:58298494-58298513 | Msa0690470:CDS | 45.0% |
| AAAAGAGTCTGTTTCGGAGG+CGG | - | chr4_4:58298637-58298656 | Msa0690470:CDS | 45.0% | |
| ! | GGAGCATCATAACTAGCTGT+TGG | + | chr4_4:58298680-58298699 | None:intergenic | 45.0% |
| GCTAACGCATTACCCATCAA+TGG | + | chr4_4:58298764-58298783 | None:intergenic | 45.0% | |
| GTTGGATGTGAATAGAGGAG+AGG | - | chr4_4:58298802-58298821 | Msa0690470:CDS | 45.0% | |
| ! | TACTTTCCGATTTGCCGTAG+AGG | - | chr4_4:58298856-58298875 | Msa0690470:CDS | 45.0% |
| ! | ACTTTCCGATTTGCCGTAGA+GGG | - | chr4_4:58298857-58298876 | Msa0690470:CDS | 45.0% |
| AGCTATTCTAAGCCCCTCTA+CGG | + | chr4_4:58298873-58298892 | None:intergenic | 45.0% | |
| ATTGAGTACTCAGAGCTTCC+AGG | - | chr4_4:58298950-58298969 | Msa0690470:CDS | 45.0% | |
| GTGTAAACATCACTTGTGCC+TGG | + | chr4_4:58298982-58299001 | None:intergenic | 45.0% | |
| GGCACAAGTGATGTTTACAC+AGG | - | chr4_4:58298982-58299001 | Msa0690470:CDS | 45.0% | |
| CTTATCAGTCTGGCTACGAA+TGG | + | chr4_4:58299008-58299027 | None:intergenic | 45.0% | |
| AGCATCAACTACTGCCACAA+TGG | + | chr4_4:58299038-58299057 | None:intergenic | 45.0% | |
| TCTTTAAGCTCACCAGGAAG+CGG | + | chr4_4:58299097-58299116 | None:intergenic | 45.0% | |
| AGAACCTCTTTAAGCTCACC+AGG | + | chr4_4:58299103-58299122 | None:intergenic | 45.0% | |
| GGTGAGCTTAAAGAGGTTCT+TGG | - | chr4_4:58299103-58299122 | Msa0690470:CDS | 45.0% | |
| ! | GTTTACGGATAGTTCTGTGG+TGG | - | chr4_4:58299189-58299208 | Msa0690470:CDS | 45.0% |
| ! | ATAGTTCTGTGGTGGCAGTT+GGG | - | chr4_4:58299197-58299216 | Msa0690470:CDS | 45.0% |
| AGTACGATCTTGAGAGAAGC+TGG | + | chr4_4:58299310-58299329 | None:intergenic | 45.0% | |
| CGGATAGTAGTTTCTGCATC+TGG | + | chr4_4:58299336-58299355 | None:intergenic | 45.0% | |
| AAACTACTATCCGTTGCCCT+TGG | - | chr4_4:58299343-58299362 | Msa0690470:CDS | 45.0% | |
| !! | CCGTAGCTTTAGATGAACCA+AGG | + | chr4_4:58299363-58299382 | None:intergenic | 45.0% |
| AGGCAAAAGATTCAGCGTGT+TGG | - | chr4_4:58299538-58299557 | Msa0690470:CDS | 45.0% | |
| TTGAATTCCACGACCCAAAC+TGG | + | chr4_4:58299677-58299696 | None:intergenic | 45.0% | |
| GGAGTGTAGAGAATGGCCAT+AGG | + | chr4_4:58297905-58297924 | None:intergenic | 50.0% | |
| GATGAGTATGAGAGGGTTGC+TGG | - | chr4_4:58298242-58298261 | Msa0690470:CDS | 50.0% | |
| ! | GGCTGCCAAAGATGTTGGTT+CGG | - | chr4_4:58298328-58298347 | Msa0690470:CDS | 50.0% |
| !! | GCAAGGTGCTGCAACTTCTT+TGG | - | chr4_4:58298511-58298530 | Msa0690470:CDS | 50.0% |
| AAAGAGTCTGTTTCGGAGGC+GGG | - | chr4_4:58298638-58298657 | Msa0690470:CDS | 50.0% | |
| ! | CTTTCCGATTTGCCGTAGAG+GGG | - | chr4_4:58298858-58298877 | Msa0690470:CDS | 50.0% |
| TAAGCCCCTCTACGGCAAAT+CGG | + | chr4_4:58298865-58298884 | None:intergenic | 50.0% | |
| GCTTCCTGGTGAGCTTAAAG+AGG | - | chr4_4:58299096-58299115 | Msa0690470:CDS | 50.0% | |
| ! | GATAGTTCTGTGGTGGCAGT+TGG | - | chr4_4:58299196-58299215 | Msa0690470:CDS | 50.0% |
| ! | TAGTTCTGTGGTGGCAGTTG+GGG | - | chr4_4:58299198-58299217 | Msa0690470:CDS | 50.0% |
| ! | GCTGGAGCAACAGCAGTTTT+AGG | - | chr4_4:58299220-58299239 | Msa0690470:CDS | 50.0% |
| ! | TCATCTAAAGCTACGGCTCC+TGG | - | chr4_4:58299367-58299386 | Msa0690470:CDS | 50.0% |
| GCTCCTGGATTTGCAACTTC+TGG | - | chr4_4:58299382-58299401 | Msa0690470:CDS | 50.0% | |
| GCTCCAGAAGTTGCAAATCC+AGG | + | chr4_4:58299388-58299407 | None:intergenic | 50.0% | |
| GGCTATGGCAACCTGAGTAA+CGG | + | chr4_4:58299461-58299480 | None:intergenic | 50.0% | |
| TTGCCTTGGGCTACATTTGC+AGG | - | chr4_4:58299565-58299584 | Msa0690470:CDS | 50.0% | |
| ACCCAAACTGGCAATTGAGG+GGG | + | chr4_4:58299665-58299684 | None:intergenic | 50.0% | |
| GACCCAAACTGGCAATTGAG+GGG | + | chr4_4:58299666-58299685 | None:intergenic | 50.0% | |
| CGACCCAAACTGGCAATTGA+GGG | + | chr4_4:58299667-58299686 | None:intergenic | 50.0% | |
| ACGACCCAAACTGGCAATTG+AGG | + | chr4_4:58299668-58299687 | None:intergenic | 50.0% | |
| TCAATTGCCAGTTTGGGTCG+TGG | - | chr4_4:58299667-58299686 | Msa0690470:CDS | 50.0% | |
| GGAGTGTAGAGAATGGCCAT+AGG | + | chr4_4:58297905-58297924 | None:intergenic | 50.0% | |
| GATGAGTATGAGAGGGTTGC+TGG | - | chr4_4:58298242-58298261 | Msa0690470:CDS | 50.0% | |
| ! | GGCTGCCAAAGATGTTGGTT+CGG | - | chr4_4:58298328-58298347 | Msa0690470:CDS | 50.0% |
| !! | GCAAGGTGCTGCAACTTCTT+TGG | - | chr4_4:58298511-58298530 | Msa0690470:CDS | 50.0% |
| AAAGAGTCTGTTTCGGAGGC+GGG | - | chr4_4:58298638-58298657 | Msa0690470:CDS | 50.0% | |
| ! | CTTTCCGATTTGCCGTAGAG+GGG | - | chr4_4:58298858-58298877 | Msa0690470:CDS | 50.0% |
| TAAGCCCCTCTACGGCAAAT+CGG | + | chr4_4:58298865-58298884 | None:intergenic | 50.0% | |
| GCTTCCTGGTGAGCTTAAAG+AGG | - | chr4_4:58299096-58299115 | Msa0690470:CDS | 50.0% | |
| ! | GATAGTTCTGTGGTGGCAGT+TGG | - | chr4_4:58299196-58299215 | Msa0690470:CDS | 50.0% |
| ! | TAGTTCTGTGGTGGCAGTTG+GGG | - | chr4_4:58299198-58299217 | Msa0690470:CDS | 50.0% |
| ! | GCTGGAGCAACAGCAGTTTT+AGG | - | chr4_4:58299220-58299239 | Msa0690470:CDS | 50.0% |
| ! | TCATCTAAAGCTACGGCTCC+TGG | - | chr4_4:58299367-58299386 | Msa0690470:CDS | 50.0% |
| GCTCCTGGATTTGCAACTTC+TGG | - | chr4_4:58299382-58299401 | Msa0690470:CDS | 50.0% | |
| GCTCCAGAAGTTGCAAATCC+AGG | + | chr4_4:58299388-58299407 | None:intergenic | 50.0% | |
| GGCTATGGCAACCTGAGTAA+CGG | + | chr4_4:58299461-58299480 | None:intergenic | 50.0% | |
| TTGCCTTGGGCTACATTTGC+AGG | - | chr4_4:58299565-58299584 | Msa0690470:CDS | 50.0% | |
| ACCCAAACTGGCAATTGAGG+GGG | + | chr4_4:58299665-58299684 | None:intergenic | 50.0% | |
| GACCCAAACTGGCAATTGAG+GGG | + | chr4_4:58299666-58299685 | None:intergenic | 50.0% | |
| CGACCCAAACTGGCAATTGA+GGG | + | chr4_4:58299667-58299686 | None:intergenic | 50.0% | |
| ACGACCCAAACTGGCAATTG+AGG | + | chr4_4:58299668-58299687 | None:intergenic | 50.0% | |
| TCAATTGCCAGTTTGGGTCG+TGG | - | chr4_4:58299667-58299686 | Msa0690470:CDS | 50.0% | |
| ATGCAGCCTGTTGGCGAGAA+AGG | - | chr4_4:58298908-58298927 | Msa0690470:CDS | 55.0% | |
| GAAACGCCTTTCTCGCCAAC+AGG | + | chr4_4:58298917-58298936 | None:intergenic | 55.0% | |
| AGAGCTTCCAGGTGATGTCC+AGG | - | chr4_4:58298961-58298980 | Msa0690470:CDS | 55.0% | |
| ACTTGTGCCTGGACATCACC+TGG | + | chr4_4:58298971-58298990 | None:intergenic | 55.0% | |
| AGGAGCTTCGTCTCTGACCA+AGG | - | chr4_4:58299240-58299259 | Msa0690470:CDS | 55.0% | |
| !! | CCTTTGTCAGCGTCGACATG+GGG | + | chr4_4:58299270-58299289 | None:intergenic | 55.0% |
| !! | GCCTTTGTCAGCGTCGACAT+GGG | + | chr4_4:58299271-58299290 | None:intergenic | 55.0% |
| !! | AGCCTTTGTCAGCGTCGACA+TGG | + | chr4_4:58299272-58299291 | None:intergenic | 55.0% |
| !! | AGCGTGTTGGCTTCTTGCCT+TGG | - | chr4_4:58299551-58299570 | Msa0690470:CDS | 55.0% |
| !! | GCGTGTTGGCTTCTTGCCTT+GGG | - | chr4_4:58299552-58299571 | Msa0690470:CDS | 55.0% |
| CTGCCTGCAAATGTAGCCCA+AGG | + | chr4_4:58299571-58299590 | None:intergenic | 55.0% | |
| GCCCCCTCAATTGCCAGTTT+GGG | - | chr4_4:58299661-58299680 | Msa0690470:CDS | 55.0% | |
| ATGCAGCCTGTTGGCGAGAA+AGG | - | chr4_4:58298908-58298927 | Msa0690470:CDS | 55.0% | |
| GAAACGCCTTTCTCGCCAAC+AGG | + | chr4_4:58298917-58298936 | None:intergenic | 55.0% | |
| AGAGCTTCCAGGTGATGTCC+AGG | - | chr4_4:58298961-58298980 | Msa0690470:CDS | 55.0% | |
| ACTTGTGCCTGGACATCACC+TGG | + | chr4_4:58298971-58298990 | None:intergenic | 55.0% | |
| AGGAGCTTCGTCTCTGACCA+AGG | - | chr4_4:58299240-58299259 | Msa0690470:CDS | 55.0% | |
| !! | CCTTTGTCAGCGTCGACATG+GGG | + | chr4_4:58299270-58299289 | None:intergenic | 55.0% |
| !! | GCCTTTGTCAGCGTCGACAT+GGG | + | chr4_4:58299271-58299290 | None:intergenic | 55.0% |
| !! | AGCCTTTGTCAGCGTCGACA+TGG | + | chr4_4:58299272-58299291 | None:intergenic | 55.0% |
| !! | AGCGTGTTGGCTTCTTGCCT+TGG | - | chr4_4:58299551-58299570 | Msa0690470:CDS | 55.0% |
| !! | GCGTGTTGGCTTCTTGCCTT+GGG | - | chr4_4:58299552-58299571 | Msa0690470:CDS | 55.0% |
| CTGCCTGCAAATGTAGCCCA+AGG | + | chr4_4:58299571-58299590 | None:intergenic | 55.0% | |
| GCCCCCTCAATTGCCAGTTT+GGG | - | chr4_4:58299661-58299680 | Msa0690470:CDS | 55.0% | |
| GTTGCAGCACCTTGCTGCTG+AGG | + | chr4_4:58298506-58298525 | None:intergenic | 60.0% | |
| ! | GTCTGTTTCGGAGGCGGGTT+CGG | - | chr4_4:58298643-58298662 | Msa0690470:CDS | 60.0% |
| GATGAGGGGATGCAGCCTGT+TGG | - | chr4_4:58298899-58298918 | Msa0690470:CDS | 60.0% | |
| CACTGGGATACTCCGCTTCC+TGG | - | chr4_4:58299082-58299101 | Msa0690470:CDS | 60.0% | |
| CGTCGACATGGGGACTACCT+TGG | + | chr4_4:58299260-58299279 | None:intergenic | 60.0% | |
| CCCCATGTCGACGCTGACAA+AGG | - | chr4_4:58299267-58299286 | Msa0690470:CDS | 60.0% | |
| GGCAGCATCGCAACTTGCAC+AGG | - | chr4_4:58299586-58299605 | Msa0690470:CDS | 60.0% | |
| AATTGAGGGGGCGACAGGGA+GGG | + | chr4_4:58299653-58299672 | None:intergenic | 60.0% | |
| TGGCAATTGAGGGGGCGACA+GGG | + | chr4_4:58299657-58299676 | None:intergenic | 60.0% | |
| CGCCCCCTCAATTGCCAGTT+TGG | - | chr4_4:58299660-58299679 | Msa0690470:CDS | 60.0% | |
| GTTGCAGCACCTTGCTGCTG+AGG | + | chr4_4:58298506-58298525 | None:intergenic | 60.0% | |
| ! | GTCTGTTTCGGAGGCGGGTT+CGG | - | chr4_4:58298643-58298662 | Msa0690470:CDS | 60.0% |
| GATGAGGGGATGCAGCCTGT+TGG | - | chr4_4:58298899-58298918 | Msa0690470:CDS | 60.0% | |
| CACTGGGATACTCCGCTTCC+TGG | - | chr4_4:58299082-58299101 | Msa0690470:CDS | 60.0% | |
| CGTCGACATGGGGACTACCT+TGG | + | chr4_4:58299260-58299279 | None:intergenic | 60.0% | |
| CCCCATGTCGACGCTGACAA+AGG | - | chr4_4:58299267-58299286 | Msa0690470:CDS | 60.0% | |
| GGCAGCATCGCAACTTGCAC+AGG | - | chr4_4:58299586-58299605 | Msa0690470:CDS | 60.0% | |
| AATTGAGGGGGCGACAGGGA+GGG | + | chr4_4:58299653-58299672 | None:intergenic | 60.0% | |
| TGGCAATTGAGGGGGCGACA+GGG | + | chr4_4:58299657-58299676 | None:intergenic | 60.0% | |
| CGCCCCCTCAATTGCCAGTT+TGG | - | chr4_4:58299660-58299679 | Msa0690470:CDS | 60.0% | |
| TCTGTGGTGGCAGTTGGGGC+TGG | - | chr4_4:58299202-58299221 | Msa0690470:CDS | 65.0% | |
| CAATTGAGGGGGCGACAGGG+AGG | + | chr4_4:58299654-58299673 | None:intergenic | 65.0% | |
| CTGGCAATTGAGGGGGCGAC+AGG | + | chr4_4:58299658-58299677 | None:intergenic | 65.0% | |
| TCTGTGGTGGCAGTTGGGGC+TGG | - | chr4_4:58299202-58299221 | Msa0690470:CDS | 65.0% | |
| CAATTGAGGGGGCGACAGGG+AGG | + | chr4_4:58299654-58299673 | None:intergenic | 65.0% | |
| CTGGCAATTGAGGGGGCGAC+AGG | + | chr4_4:58299658-58299677 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 58297870 | 58299801 | 58297870 | ID=Msa0690470;Name=Msa0690470 |
| chr4_4 | mRNA | 58297870 | 58299801 | 58297870 | ID=Msa0690470-mRNA-1;Parent=Msa0690470;Name=Msa0690470-mRNA-1;_AED=0.35;_eAED=0.35;_QI=0|-1|0|1|-1|1|1|0|643 |
| chr4_4 | exon | 58297870 | 58299801 | 58297870 | ID=Msa0690470-mRNA-1:exon:15670;Parent=Msa0690470-mRNA-1 |
| chr4_4 | CDS | 58297870 | 58299801 | 58297870 | ID=Msa0690470-mRNA-1:cds;Parent=Msa0690470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
