Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0695050 | XP_003608122.2 | 96.250 | 400 | 15 | 0 | 1 | 400 | 1 | 400 | 0.0 | 801 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0695050 | sp|O49523|DSEL_ARATH | 53.283 | 396 | 177 | 5 | 4 | 392 | 19 | 413 | 2.29e-147 | 427 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0695050 | G7JPP4 | 96.250 | 400 | 15 | 0 | 1 | 400 | 1 | 400 | 0.0 | 801 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0612220 | Msa0695050 | 0.910584 | 1.591161e-82 | -8.615850e-47 |
| Msa0695050 | Msa0945370 | 0.899260 | 2.363904e-77 | -8.615850e-47 |
| Msa0695050 | Msa1430350 | 0.893898 | 4.092194e-75 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0695050 | MtrunA17_Chr4g0046011 | 96.250 | 400 | 15 | 0 | 1 | 400 | 1 | 400 | 0.0 | 801 |
| Msa0695050 | MtrunA17_Chr4g0046001 | 91.457 | 398 | 34 | 0 | 1 | 398 | 10 | 407 | 0.0 | 761 |
| Msa0695050 | MtrunA17_Chr2g0283561 | 61.616 | 396 | 144 | 4 | 3 | 392 | 38 | 431 | 7.53e-177 | 499 |
| Msa0695050 | MtrunA17_Chr4g0039301 | 39.310 | 435 | 220 | 10 | 1 | 400 | 97 | 522 | 2.12e-98 | 303 |
| Msa0695050 | MtrunA17_Chr4g0041311 | 40.441 | 408 | 201 | 7 | 7 | 383 | 31 | 427 | 1.70e-96 | 295 |
| Msa0695050 | MtrunA17_Chr7g0260671 | 38.005 | 421 | 224 | 7 | 4 | 393 | 74 | 488 | 3.86e-94 | 291 |
| Msa0695050 | MtrunA17_Chr7g0260681 | 36.544 | 353 | 193 | 6 | 4 | 331 | 74 | 420 | 9.08e-74 | 236 |
| Msa0695050 | MtrunA17_Chr7g0214711 | 39.249 | 293 | 145 | 8 | 4 | 288 | 105 | 372 | 7.04e-57 | 194 |
| Msa0695050 | MtrunA17_Chr7g0250611 | 34.688 | 369 | 192 | 14 | 3 | 345 | 74 | 419 | 1.47e-54 | 186 |
| Msa0695050 | MtrunA17_Chr5g0399641 | 33.075 | 387 | 195 | 12 | 4 | 350 | 135 | 497 | 6.51e-52 | 182 |
| Msa0695050 | MtrunA17_Chr4g0055691 | 34.109 | 387 | 184 | 13 | 3 | 350 | 128 | 482 | 1.18e-47 | 170 |
| Msa0695050 | MtrunA17_Chr7g0250561 | 31.750 | 400 | 201 | 15 | 4 | 349 | 69 | 450 | 2.50e-47 | 167 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0695050 | AT4G18550.1 | 53.283 | 396 | 177 | 5 | 4 | 392 | 19 | 413 | 2.33e-148 | 427 |
| Msa0695050 | AT4G18550.2 | 53.283 | 396 | 177 | 5 | 4 | 392 | 36 | 430 | 2.38e-148 | 427 |
| Msa0695050 | AT1G06250.1 | 49.100 | 389 | 190 | 4 | 4 | 385 | 5 | 392 | 2.27e-135 | 394 |
| Msa0695050 | AT4G18550.3 | 52.595 | 289 | 130 | 4 | 4 | 290 | 36 | 319 | 6.44e-105 | 313 |
| Msa0695050 | AT1G51440.1 | 41.429 | 420 | 200 | 12 | 3 | 387 | 86 | 494 | 1.11e-93 | 291 |
| Msa0695050 | AT2G30550.2 | 39.573 | 422 | 211 | 12 | 7 | 393 | 104 | 516 | 4.44e-91 | 284 |
| Msa0695050 | AT1G06800.1 | 39.535 | 430 | 215 | 14 | 7 | 400 | 88 | 508 | 3.41e-90 | 281 |
| Msa0695050 | AT1G06250.2 | 49.640 | 278 | 133 | 3 | 115 | 385 | 1 | 278 | 1.02e-89 | 273 |
| Msa0695050 | AT2G42690.1 | 37.226 | 411 | 222 | 7 | 1 | 385 | 1 | 401 | 7.16e-81 | 254 |
| Msa0695050 | AT1G30370.1 | 35.961 | 406 | 220 | 11 | 4 | 383 | 114 | 505 | 7.62e-79 | 253 |
| Msa0695050 | AT2G30550.1 | 39.548 | 354 | 176 | 11 | 7 | 331 | 104 | 448 | 2.45e-74 | 239 |
| Msa0695050 | AT1G06800.2 | 39.888 | 356 | 175 | 13 | 7 | 332 | 88 | 434 | 7.08e-73 | 234 |
| Msa0695050 | AT2G31690.1 | 38.889 | 288 | 160 | 6 | 4 | 288 | 88 | 362 | 7.01e-58 | 196 |
| Msa0695050 | AT1G05800.1 | 35.165 | 364 | 194 | 10 | 4 | 346 | 80 | 422 | 1.59e-57 | 195 |
| Msa0695050 | AT2G44810.2 | 32.199 | 382 | 195 | 11 | 4 | 345 | 86 | 443 | 1.06e-51 | 179 |
| Msa0695050 | AT2G44810.1 | 32.181 | 376 | 191 | 11 | 10 | 345 | 2 | 353 | 3.76e-50 | 173 |
| Msa0695050 | AT4G16820.1 | 34.518 | 394 | 187 | 15 | 8 | 361 | 131 | 493 | 5.19e-49 | 174 |
Find 87 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGAGGGTGGTGGAGAATA+AGG | 0.186405 | 4_4:+64483375 | Msa0695050:CDS |
| TCCAAAGTATATTTGGAAAA+AGG | 0.200965 | 4_4:+64481436 | Msa0695050:CDS |
| TGTAACTGCACATTCGATTT+AGG | 0.218692 | 4_4:-64481922 | None:intergenic |
| TATGCAAGAAGAAGACTATT+TGG | 0.263873 | 4_4:-64483142 | None:intergenic |
| TAATTGTCGTTATTCTAAAA+AGG | 0.269491 | 4_4:+64481405 | Msa0695050:CDS |
| CGTAAGTACTTACTACATTA+TGG | 0.283055 | 4_4:+64481322 | Msa0695050:CDS |
| TAAAGGAGGGTTTAATTTAG+AGG | 0.288625 | 4_4:+64483282 | Msa0695050:CDS |
| TTAACAGCTAAGGAAGCATT+AGG | 0.303858 | 4_4:+64481799 | Msa0695050:intron |
| CCTGTCACATTATTTGCATT+TGG | 0.305993 | 4_4:+64483025 | Msa0695050:CDS |
| TTCAAAGGATGCTTGGAGTA+TGG | 0.306662 | 4_4:+64481546 | Msa0695050:CDS |
| CGCTGCACTATCTCTTGCTT+TGG | 0.312823 | 4_4:-64481503 | None:intergenic |
| AATCATGCGTTCTAAATTGT+AGG | 0.336214 | 4_4:+64483459 | Msa0695050:CDS |
| GTTTATTTGCATGGAATTGC+AGG | 0.337895 | 4_4:+64483247 | Msa0695050:CDS |
| CTTGGAGTATGGAAACAAAT+TGG | 0.350231 | 4_4:+64481557 | Msa0695050:CDS |
| CGTGTTGGAAATTCTAACTT+TGG | 0.360641 | 4_4:+64483055 | Msa0695050:CDS |
| AATATCACATTCCTGAGAAT+TGG | 0.362474 | 4_4:+64483356 | Msa0695050:CDS |
| CTAGCACTAGAATCAGCTAT+TGG | 0.371790 | 4_4:-64481988 | None:intergenic |
| TGCTTGGAGAGGGACAATTC+AGG | 0.376867 | 4_4:+64481840 | Msa0695050:CDS |
| GATCCTGCACCACTTATATT+CGG | 0.398511 | 4_4:+64481898 | Msa0695050:CDS |
| TGATGGTACTTGGAAGCTAA+TGG | 0.402739 | 4_4:+64483414 | Msa0695050:CDS |
| AATAAATTCAACATACCAAA+AGG | 0.412590 | 4_4:+64482983 | Msa0695050:CDS |
| AAGTAAGTGGAAAGGTCTAT+TGG | 0.420412 | 4_4:+64481279 | Msa0695050:CDS |
| ACTTGCAACTATAAGTTCTA+TGG | 0.425826 | 4_4:+64482949 | Msa0695050:CDS |
| GGATGTTGCATACAAATACT+TGG | 0.442993 | 4_4:-64481482 | None:intergenic |
| TTTGCTCAAGCTACATATGA+TGG | 0.446546 | 4_4:+64481349 | Msa0695050:CDS |
| TGATGGTTTCAACTTTGAAA+AGG | 0.449579 | 4_4:+64481366 | Msa0695050:CDS |
| TAACAGCTAAGGAAGCATTA+GGG | 0.450387 | 4_4:+64481800 | Msa0695050:intron |
| TGGAGGGTGGTGGAGAATAA+GGG | 0.455462 | 4_4:+64483376 | Msa0695050:CDS |
| TGATTCTAGTGCTAGAAAAC+AGG | 0.455743 | 4_4:+64481996 | Msa0695050:CDS |
| TTCAACAATCTGATGGTACT+TGG | 0.456136 | 4_4:+64483404 | Msa0695050:CDS |
| AACATGGAGGTTTATTTGCA+TGG | 0.461774 | 4_4:+64483238 | Msa0695050:CDS |
| CTATTAAACAAAAGTAATGA+TGG | 0.464521 | 4_4:+64483322 | Msa0695050:CDS |
| AATCTAAGTACTTGAAGAGT+GGG | 0.469182 | 4_4:+64483203 | Msa0695050:CDS |
| AACTGTCGTTGGACACAGCT+TGG | 0.475044 | 4_4:+64482919 | Msa0695050:CDS |
| TCCACCACCCTCCAATTCTC+AGG | 0.477117 | 4_4:-64483367 | None:intergenic |
| TTGGTCACAGAATACTTGTA+AGG | 0.480981 | 4_4:-64481463 | None:intergenic |
| GGAGGGACATAGTTGTTGCT+TGG | 0.481190 | 4_4:+64481824 | Msa0695050:CDS |
| GCTTGGAGAGGGACAATTCA+GGG | 0.489035 | 4_4:+64481841 | Msa0695050:CDS |
| TGCATATTCAAAGGTGGGAG+AGG | 0.502064 | 4_4:+64483159 | Msa0695050:CDS |
| CTTCTTGCATATTCAAAGGT+GGG | 0.504433 | 4_4:+64483154 | Msa0695050:CDS |
| GAGTATGGAAACAAATTGGA+TGG | 0.512934 | 4_4:+64481561 | Msa0695050:CDS |
| ACTGTCGTTGGACACAGCTT+GGG | 0.515205 | 4_4:+64482920 | Msa0695050:CDS |
| GACAATTCAGGGTGCAGAGT+GGG | 0.520098 | 4_4:+64481852 | Msa0695050:CDS |
| GAAAAGGCATCTAAGTATGC+AGG | 0.523914 | 4_4:+64481382 | Msa0695050:CDS |
| GGACCGAATATAAGTGGTGC+AGG | 0.524592 | 4_4:-64481901 | None:intergenic |
| TCCTGAGAATTGGAGGGTGG+TGG | 0.527608 | 4_4:+64483366 | Msa0695050:CDS |
| CATGGAATTGCAGGAACACA+AGG | 0.532517 | 4_4:+64483256 | Msa0695050:CDS |
| ACATAGTTGTTGCTTGGAGA+GGG | 0.533659 | 4_4:+64481830 | Msa0695050:CDS |
| CTAAGGAAGCATTAGGGAGG+AGG | 0.534094 | 4_4:+64481806 | Msa0695050:CDS |
| AACTTAGTGGCAAAAGTAAG+TGG | 0.534655 | 4_4:+64481266 | Msa0695050:CDS |
| ATCACATTCCTGAGAATTGG+AGG | 0.536099 | 4_4:+64483359 | Msa0695050:CDS |
| GAAATTAGCATAACTGTCGT+TGG | 0.536154 | 4_4:+64482908 | Msa0695050:CDS |
| CCAAATGCAAATAATGTGAC+AGG | 0.536537 | 4_4:-64483025 | None:intergenic |
| TCTTCTTGCATATTCAAAGG+TGG | 0.538213 | 4_4:+64483153 | Msa0695050:CDS |
| GCAGGAACACAAGGAAGTAA+AGG | 0.539942 | 4_4:+64483265 | Msa0695050:CDS |
| GATTTAGGACCGAATATAAG+TGG | 0.540170 | 4_4:-64481907 | None:intergenic |
| TCTTCTTCTTGCATATTCAA+AGG | 0.541516 | 4_4:+64483150 | Msa0695050:CDS |
| AAACGAGATTAGCAGACTTG+TGG | 0.547519 | 4_4:+64482868 | Msa0695050:CDS |
| TGGGGTTAGTGCACATAACA+TGG | 0.566949 | 4_4:+64483222 | Msa0695050:CDS |
| AGTATGGAAACAAATTGGAT+GGG | 0.568664 | 4_4:+64481562 | Msa0695050:CDS |
| GCATTTGGTTCACCTCGTGT+TGG | 0.574021 | 4_4:+64483040 | Msa0695050:CDS |
| AAATCTAAGTACTTGAAGAG+TGG | 0.574558 | 4_4:+64483202 | Msa0695050:CDS |
| GACATAGTTGTTGCTTGGAG+AGG | 0.575425 | 4_4:+64481829 | Msa0695050:CDS |
| GTTGCTGTTGCCACTGATGA+AGG | 0.576148 | 4_4:+64481589 | Msa0695050:CDS |
| TTCAACATTACCTTCATCAG+TGG | 0.579087 | 4_4:-64481599 | None:intergenic |
| ATAAATTCAACATACCAAAA+GGG | 0.580395 | 4_4:+64482984 | Msa0695050:CDS |
| GGTGGTGGAGAATAAGGGTA+TGG | 0.582115 | 4_4:+64483381 | Msa0695050:CDS |
| TAAGGAAGCATTAGGGAGGA+GGG | 0.586465 | 4_4:+64481807 | Msa0695050:CDS |
| TTACGTAGGTCAATGTGTAA+AGG | 0.596130 | 4_4:-64481304 | None:intergenic |
| GGAACACAAGGAAGTAAAGG+AGG | 0.618211 | 4_4:+64483268 | Msa0695050:CDS |
| GGTATGGTTCAACAATCTGA+TGG | 0.619750 | 4_4:+64483397 | Msa0695050:CDS |
| AGTGGCAAAAGTAAGTGGAA+AGG | 0.625837 | 4_4:+64481271 | Msa0695050:CDS |
| GTATGGAAACAAATTGGATG+GGG | 0.630148 | 4_4:+64481563 | Msa0695050:CDS |
| TCGAATGTGCAGTTACACAA+TGG | 0.630838 | 4_4:+64481928 | Msa0695050:CDS |
| TGGGTAGCATAGCAAGAACA+TGG | 0.635845 | 4_4:+64481239 | Msa0695050:CDS |
| GTCGTTGGACACAGCTTGGG+TGG | 0.639883 | 4_4:+64482923 | Msa0695050:CDS |
| AGAACATGGAGAGAACTTAG+TGG | 0.643312 | 4_4:+64481253 | Msa0695050:CDS |
| GAGGAATTAGAAATCGACGC+TGG | 0.655608 | 4_4:+64483178 | Msa0695050:CDS |
| TCACATTCCTGAGAATTGGA+GGG | 0.659641 | 4_4:+64483360 | Msa0695050:CDS |
| ATCTAAGTACTTGAAGAGTG+GGG | 0.675113 | 4_4:+64483204 | Msa0695050:CDS |
| AAGTTAGAATTTCCAACACG+AGG | 0.679774 | 4_4:-64483052 | None:intergenic |
| CATTCCTGAGAATTGGAGGG+TGG | 0.687333 | 4_4:+64483363 | Msa0695050:CDS |
| GAACACAAGGAAGTAAAGGA+GGG | 0.689646 | 4_4:+64483269 | Msa0695050:CDS |
| AATGTAGTAAGTACTTACGT+AGG | 0.694414 | 4_4:-64481318 | None:intergenic |
| CAGCTAAGGAAGCATTAGGG+AGG | 0.703114 | 4_4:+64481803 | Msa0695050:intron |
| GGACAATTCAGGGTGCAGAG+TGG | 0.708525 | 4_4:+64481851 | Msa0695050:CDS |
| GGTTAGTGCACATAACATGG+AGG | 0.759022 | 4_4:+64483225 | Msa0695050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCAAAATTTTAATATTGATT+TGG | + | chr4_4:64481876-64481895 | Msa0695050:CDS | 10.0% |
| !!! | ATAGAAATCATTTTTTTTAA+AGG | + | chr4_4:64482486-64482505 | Msa0695050:intron | 10.0% |
| !!! | AAAAAAAGTATAACTTTTTT+TGG | + | chr4_4:64482593-64482612 | Msa0695050:intron | 10.0% |
| !!! | TTTAATTTTACTATGTATTT+AGG | - | chr4_4:64482639-64482658 | None:intergenic | 10.0% |
| !!! | TCAAAATTTTAATATTGATT+TGG | + | chr4_4:64481876-64481895 | Msa0695050:CDS | 10.0% |
| !!! | ATAGAAATCATTTTTTTTAA+AGG | + | chr4_4:64482486-64482505 | Msa0695050:intron | 10.0% |
| !!! | AAAAAAAGTATAACTTTTTT+TGG | + | chr4_4:64482593-64482612 | Msa0695050:intron | 10.0% |
| !!! | TTTAATTTTACTATGTATTT+AGG | - | chr4_4:64482639-64482658 | None:intergenic | 10.0% |
| !!! | TAGAAATTCACTTTTTTTTA+AGG | - | chr4_4:64482279-64482298 | None:intergenic | 15.0% |
| !! | AACTTAATAAAGAAAACTTT+AGG | - | chr4_4:64482426-64482445 | None:intergenic | 15.0% |
| !!! | ATATTTATAGTACTTGATTT+TGG | + | chr4_4:64482798-64482817 | Msa0695050:intron | 15.0% |
| !!! | TAGAAATTCACTTTTTTTTA+AGG | - | chr4_4:64482279-64482298 | None:intergenic | 15.0% |
| !! | AACTTAATAAAGAAAACTTT+AGG | - | chr4_4:64482426-64482445 | None:intergenic | 15.0% |
| !!! | ATATTTATAGTACTTGATTT+TGG | + | chr4_4:64482798-64482817 | Msa0695050:intron | 15.0% |
| !!! | TAATTGTCGTTATTCTAAAA+AGG | + | chr4_4:64481405-64481424 | Msa0695050:CDS | 20.0% |
| !!! | TTTCTTTTCCAAAGTATATT+TGG | + | chr4_4:64481429-64481448 | Msa0695050:CDS | 20.0% |
| !!! | CTTAACTTCAATATTTTCAA+AGG | + | chr4_4:64481531-64481550 | Msa0695050:CDS | 20.0% |
| !! | TATTAGTAAAAGTTGTAAGT+TGG | - | chr4_4:64481764-64481783 | None:intergenic | 20.0% |
| !!! | TTAAACAATTTTAACAGCTA+AGG | + | chr4_4:64481789-64481808 | Msa0695050:intron | 20.0% |
| !! | AGCATAACTTAATAATCTTA+AGG | - | chr4_4:64482522-64482541 | None:intergenic | 20.0% |
| !!! | GTTATACTTTTTTTTGAAGA+AGG | - | chr4_4:64482587-64482606 | None:intergenic | 20.0% |
| !!! | TACTATGTATTTAGGTTATA+GGG | - | chr4_4:64482631-64482650 | None:intergenic | 20.0% |
| !!! | TTACTATGTATTTAGGTTAT+AGG | - | chr4_4:64482632-64482651 | None:intergenic | 20.0% |
| !!! | ATTTAGCTTGAGATTTTTTT+TGG | - | chr4_4:64482757-64482776 | None:intergenic | 20.0% |
| !!! | GTTTTTTAACATTTGTAATG+TGG | + | chr4_4:64482829-64482848 | Msa0695050:intron | 20.0% |
| !! | AATAAATTCAACATACCAAA+AGG | + | chr4_4:64482983-64483002 | Msa0695050:CDS | 20.0% |
| !! | ATAAATTCAACATACCAAAA+GGG | + | chr4_4:64482984-64483003 | Msa0695050:CDS | 20.0% |
| !! | CTATTAAACAAAAGTAATGA+TGG | + | chr4_4:64483322-64483341 | Msa0695050:CDS | 20.0% |
| !!! | TAATTGTCGTTATTCTAAAA+AGG | + | chr4_4:64481405-64481424 | Msa0695050:CDS | 20.0% |
| !!! | TTTCTTTTCCAAAGTATATT+TGG | + | chr4_4:64481429-64481448 | Msa0695050:CDS | 20.0% |
| !!! | CTTAACTTCAATATTTTCAA+AGG | + | chr4_4:64481531-64481550 | Msa0695050:CDS | 20.0% |
| !! | TATTAGTAAAAGTTGTAAGT+TGG | - | chr4_4:64481764-64481783 | None:intergenic | 20.0% |
| !!! | TTAAACAATTTTAACAGCTA+AGG | + | chr4_4:64481789-64481808 | Msa0695050:intron | 20.0% |
| !! | AGCATAACTTAATAATCTTA+AGG | - | chr4_4:64482522-64482541 | None:intergenic | 20.0% |
| !!! | GTTATACTTTTTTTTGAAGA+AGG | - | chr4_4:64482587-64482606 | None:intergenic | 20.0% |
| !!! | TACTATGTATTTAGGTTATA+GGG | - | chr4_4:64482631-64482650 | None:intergenic | 20.0% |
| !!! | TTACTATGTATTTAGGTTAT+AGG | - | chr4_4:64482632-64482651 | None:intergenic | 20.0% |
| !!! | ATTTAGCTTGAGATTTTTTT+TGG | - | chr4_4:64482757-64482776 | None:intergenic | 20.0% |
| !!! | GTTTTTTAACATTTGTAATG+TGG | + | chr4_4:64482829-64482848 | Msa0695050:intron | 20.0% |
| !! | AATAAATTCAACATACCAAA+AGG | + | chr4_4:64482983-64483002 | Msa0695050:CDS | 20.0% |
| !! | ATAAATTCAACATACCAAAA+GGG | + | chr4_4:64482984-64483003 | Msa0695050:CDS | 20.0% |
| !! | CTATTAAACAAAAGTAATGA+TGG | + | chr4_4:64483322-64483341 | Msa0695050:CDS | 20.0% |
| ! | TCCAAAGTATATTTGGAAAA+AGG | + | chr4_4:64481436-64481455 | Msa0695050:CDS | 25.0% |
| !! | ACCTTTTTCCAAATATACTT+TGG | - | chr4_4:64481440-64481459 | None:intergenic | 25.0% |
| ! | AAATTGAGCATAATAAGTGT+AGG | + | chr4_4:64481691-64481710 | Msa0695050:intron | 25.0% |
| ! | AATTGAGCATAATAAGTGTA+GGG | + | chr4_4:64481692-64481711 | Msa0695050:intron | 25.0% |
| ! | AGATTTATTGTAGTTTAGCT+AGG | - | chr4_4:64481736-64481755 | None:intergenic | 25.0% |
| !! | ATTTTTGTGTTATAGATCAC+CGG | + | chr4_4:64482028-64482047 | Msa0695050:intron | 25.0% |
| ! | TTAAACGTTCTAGTATATGT+AGG | + | chr4_4:64482217-64482236 | Msa0695050:intron | 25.0% |
| ! | TAAACGTTCTAGTATATGTA+GGG | + | chr4_4:64482218-64482237 | Msa0695050:intron | 25.0% |
| !!! | TTTTTTTGTTAAGTAGCACA+TGG | - | chr4_4:64482303-64482322 | None:intergenic | 25.0% |
| !! | TACTTGAAGTATTATCTTAG+TGG | - | chr4_4:64482549-64482568 | None:intergenic | 25.0% |
| !! | ACTATGTATTTAGGTTATAG+GGG | - | chr4_4:64482630-64482649 | None:intergenic | 25.0% |
| !! | TTAAACAAATTTGAGACCTA+TGG | + | chr4_4:64482654-64482673 | Msa0695050:intron | 25.0% |
| ! | AGCAGAAAAAGTTTAGTTAA+AGG | - | chr4_4:64482700-64482719 | None:intergenic | 25.0% |
| !!! | TTTAACTAAACTTTTTCTGC+TGG | + | chr4_4:64482699-64482718 | Msa0695050:intron | 25.0% |
| ! | TTGTAATGTGGCATATATAA+AGG | + | chr4_4:64482841-64482860 | Msa0695050:intron | 25.0% |
| ! | TCCAAAGTATATTTGGAAAA+AGG | + | chr4_4:64481436-64481455 | Msa0695050:CDS | 25.0% |
| !! | ACCTTTTTCCAAATATACTT+TGG | - | chr4_4:64481440-64481459 | None:intergenic | 25.0% |
| ! | AAATTGAGCATAATAAGTGT+AGG | + | chr4_4:64481691-64481710 | Msa0695050:intron | 25.0% |
| ! | AATTGAGCATAATAAGTGTA+GGG | + | chr4_4:64481692-64481711 | Msa0695050:intron | 25.0% |
| ! | AGATTTATTGTAGTTTAGCT+AGG | - | chr4_4:64481736-64481755 | None:intergenic | 25.0% |
| !! | ATTTTTGTGTTATAGATCAC+CGG | + | chr4_4:64482028-64482047 | Msa0695050:intron | 25.0% |
| ! | TTAAACGTTCTAGTATATGT+AGG | + | chr4_4:64482217-64482236 | Msa0695050:intron | 25.0% |
| ! | TAAACGTTCTAGTATATGTA+GGG | + | chr4_4:64482218-64482237 | Msa0695050:intron | 25.0% |
| !!! | TTTTTTTGTTAAGTAGCACA+TGG | - | chr4_4:64482303-64482322 | None:intergenic | 25.0% |
| !! | TACTTGAAGTATTATCTTAG+TGG | - | chr4_4:64482549-64482568 | None:intergenic | 25.0% |
| !! | ACTATGTATTTAGGTTATAG+GGG | - | chr4_4:64482630-64482649 | None:intergenic | 25.0% |
| !! | TTAAACAAATTTGAGACCTA+TGG | + | chr4_4:64482654-64482673 | Msa0695050:intron | 25.0% |
| ! | AGCAGAAAAAGTTTAGTTAA+AGG | - | chr4_4:64482700-64482719 | None:intergenic | 25.0% |
| !!! | TTTAACTAAACTTTTTCTGC+TGG | + | chr4_4:64482699-64482718 | Msa0695050:intron | 25.0% |
| ! | TTGTAATGTGGCATATATAA+AGG | + | chr4_4:64482841-64482860 | Msa0695050:intron | 25.0% |
| AATGTAGTAAGTACTTACGT+AGG | - | chr4_4:64481321-64481340 | None:intergenic | 30.0% | |
| CGTAAGTACTTACTACATTA+TGG | + | chr4_4:64481322-64481341 | Msa0695050:CDS | 30.0% | |
| ! | TGATGGTTTCAACTTTGAAA+AGG | + | chr4_4:64481366-64481385 | Msa0695050:CDS | 30.0% |
| ! | CAATATTTTCAAAGGATGCT+TGG | + | chr4_4:64481539-64481558 | Msa0695050:CDS | 30.0% |
| AGTATGGAAACAAATTGGAT+GGG | + | chr4_4:64481562-64481581 | Msa0695050:CDS | 30.0% | |
| GAAGGTAATGTTGAAAAGTA+TGG | + | chr4_4:64481607-64481626 | Msa0695050:intron | 30.0% | |
| CTAATACTATGTAGCATTAC+CGG | - | chr4_4:64482050-64482069 | None:intergenic | 30.0% | |
| AAACGTTCTAGTATATGTAG+GGG | + | chr4_4:64482219-64482238 | Msa0695050:intron | 30.0% | |
| ACTTGCAACTATAAGTTCTA+TGG | + | chr4_4:64482949-64482968 | Msa0695050:CDS | 30.0% | |
| TATGCAAGAAGAAGACTATT+TGG | - | chr4_4:64483145-64483164 | None:intergenic | 30.0% | |
| TCTTCTTCTTGCATATTCAA+AGG | + | chr4_4:64483150-64483169 | Msa0695050:CDS | 30.0% | |
| AAATCTAAGTACTTGAAGAG+TGG | + | chr4_4:64483202-64483221 | Msa0695050:CDS | 30.0% | |
| AATCTAAGTACTTGAAGAGT+GGG | + | chr4_4:64483203-64483222 | Msa0695050:CDS | 30.0% | |
| ! | TAAAGGAGGGTTTAATTTAG+AGG | + | chr4_4:64483282-64483301 | Msa0695050:CDS | 30.0% |
| AATATCACATTCCTGAGAAT+TGG | + | chr4_4:64483356-64483375 | Msa0695050:CDS | 30.0% | |
| AATGTAGTAAGTACTTACGT+AGG | - | chr4_4:64481321-64481340 | None:intergenic | 30.0% | |
| CGTAAGTACTTACTACATTA+TGG | + | chr4_4:64481322-64481341 | Msa0695050:CDS | 30.0% | |
| ! | TGATGGTTTCAACTTTGAAA+AGG | + | chr4_4:64481366-64481385 | Msa0695050:CDS | 30.0% |
| ! | CAATATTTTCAAAGGATGCT+TGG | + | chr4_4:64481539-64481558 | Msa0695050:CDS | 30.0% |
| AGTATGGAAACAAATTGGAT+GGG | + | chr4_4:64481562-64481581 | Msa0695050:CDS | 30.0% | |
| GAAGGTAATGTTGAAAAGTA+TGG | + | chr4_4:64481607-64481626 | Msa0695050:intron | 30.0% | |
| CTAATACTATGTAGCATTAC+CGG | - | chr4_4:64482050-64482069 | None:intergenic | 30.0% | |
| AAACGTTCTAGTATATGTAG+GGG | + | chr4_4:64482219-64482238 | Msa0695050:intron | 30.0% | |
| ACTTGCAACTATAAGTTCTA+TGG | + | chr4_4:64482949-64482968 | Msa0695050:CDS | 30.0% | |
| TATGCAAGAAGAAGACTATT+TGG | - | chr4_4:64483145-64483164 | None:intergenic | 30.0% | |
| TCTTCTTCTTGCATATTCAA+AGG | + | chr4_4:64483150-64483169 | Msa0695050:CDS | 30.0% | |
| AAATCTAAGTACTTGAAGAG+TGG | + | chr4_4:64483202-64483221 | Msa0695050:CDS | 30.0% | |
| AATCTAAGTACTTGAAGAGT+GGG | + | chr4_4:64483203-64483222 | Msa0695050:CDS | 30.0% | |
| ! | TAAAGGAGGGTTTAATTTAG+AGG | + | chr4_4:64483282-64483301 | Msa0695050:CDS | 30.0% |
| AATATCACATTCCTGAGAAT+TGG | + | chr4_4:64483356-64483375 | Msa0695050:CDS | 30.0% | |
| AACTTAGTGGCAAAAGTAAG+TGG | + | chr4_4:64481266-64481285 | Msa0695050:CDS | 35.0% | |
| AAGTAAGTGGAAAGGTCTAT+TGG | + | chr4_4:64481279-64481298 | Msa0695050:CDS | 35.0% | |
| TTACGTAGGTCAATGTGTAA+AGG | - | chr4_4:64481307-64481326 | None:intergenic | 35.0% | |
| TTTGCTCAAGCTACATATGA+TGG | + | chr4_4:64481349-64481368 | Msa0695050:CDS | 35.0% | |
| TTGGTCACAGAATACTTGTA+AGG | - | chr4_4:64481466-64481485 | None:intergenic | 35.0% | |
| GGATGTTGCATACAAATACT+TGG | - | chr4_4:64481485-64481504 | None:intergenic | 35.0% | |
| CTTGGAGTATGGAAACAAAT+TGG | + | chr4_4:64481557-64481576 | Msa0695050:CDS | 35.0% | |
| GAGTATGGAAACAAATTGGA+TGG | + | chr4_4:64481561-64481580 | Msa0695050:CDS | 35.0% | |
| GTATGGAAACAAATTGGATG+GGG | + | chr4_4:64481563-64481582 | Msa0695050:CDS | 35.0% | |
| TTCAACATTACCTTCATCAG+TGG | - | chr4_4:64481602-64481621 | None:intergenic | 35.0% | |
| !! | TTAACAGCTAAGGAAGCATT+AGG | + | chr4_4:64481799-64481818 | Msa0695050:intron | 35.0% |
| !! | TAACAGCTAAGGAAGCATTA+GGG | + | chr4_4:64481800-64481819 | Msa0695050:intron | 35.0% |
| ! | GATTTAGGACCGAATATAAG+TGG | - | chr4_4:64481910-64481929 | None:intergenic | 35.0% |
| TGTAACTGCACATTCGATTT+AGG | - | chr4_4:64481925-64481944 | None:intergenic | 35.0% | |
| TGATTCTAGTGCTAGAAAAC+AGG | + | chr4_4:64481996-64482015 | Msa0695050:CDS | 35.0% | |
| AACGTTCTAGTATATGTAGG+GGG | + | chr4_4:64482220-64482239 | Msa0695050:intron | 35.0% | |
| GAAATTAGCATAACTGTCGT+TGG | + | chr4_4:64482908-64482927 | Msa0695050:CDS | 35.0% | |
| CCAAATGCAAATAATGTGAC+AGG | - | chr4_4:64483028-64483047 | None:intergenic | 35.0% | |
| CCTGTCACATTATTTGCATT+TGG | + | chr4_4:64483025-64483044 | Msa0695050:CDS | 35.0% | |
| AAGTTAGAATTTCCAACACG+AGG | - | chr4_4:64483055-64483074 | None:intergenic | 35.0% | |
| CGTGTTGGAAATTCTAACTT+TGG | + | chr4_4:64483055-64483074 | Msa0695050:CDS | 35.0% | |
| TCTTCTTGCATATTCAAAGG+TGG | + | chr4_4:64483153-64483172 | Msa0695050:CDS | 35.0% | |
| CTTCTTGCATATTCAAAGGT+GGG | + | chr4_4:64483154-64483173 | Msa0695050:CDS | 35.0% | |
| ATCTAAGTACTTGAAGAGTG+GGG | + | chr4_4:64483204-64483223 | Msa0695050:CDS | 35.0% | |
| AACATGGAGGTTTATTTGCA+TGG | + | chr4_4:64483238-64483257 | Msa0695050:CDS | 35.0% | |
| GTTTATTTGCATGGAATTGC+AGG | + | chr4_4:64483247-64483266 | Msa0695050:CDS | 35.0% | |
| TTCAACAATCTGATGGTACT+TGG | + | chr4_4:64483404-64483423 | Msa0695050:CDS | 35.0% | |
| AACTTAGTGGCAAAAGTAAG+TGG | + | chr4_4:64481266-64481285 | Msa0695050:CDS | 35.0% | |
| AAGTAAGTGGAAAGGTCTAT+TGG | + | chr4_4:64481279-64481298 | Msa0695050:CDS | 35.0% | |
| TTACGTAGGTCAATGTGTAA+AGG | - | chr4_4:64481307-64481326 | None:intergenic | 35.0% | |
| TTTGCTCAAGCTACATATGA+TGG | + | chr4_4:64481349-64481368 | Msa0695050:CDS | 35.0% | |
| TTGGTCACAGAATACTTGTA+AGG | - | chr4_4:64481466-64481485 | None:intergenic | 35.0% | |
| GGATGTTGCATACAAATACT+TGG | - | chr4_4:64481485-64481504 | None:intergenic | 35.0% | |
| CTTGGAGTATGGAAACAAAT+TGG | + | chr4_4:64481557-64481576 | Msa0695050:CDS | 35.0% | |
| GAGTATGGAAACAAATTGGA+TGG | + | chr4_4:64481561-64481580 | Msa0695050:CDS | 35.0% | |
| GTATGGAAACAAATTGGATG+GGG | + | chr4_4:64481563-64481582 | Msa0695050:CDS | 35.0% | |
| TTCAACATTACCTTCATCAG+TGG | - | chr4_4:64481602-64481621 | None:intergenic | 35.0% | |
| !! | TTAACAGCTAAGGAAGCATT+AGG | + | chr4_4:64481799-64481818 | Msa0695050:intron | 35.0% |
| !! | TAACAGCTAAGGAAGCATTA+GGG | + | chr4_4:64481800-64481819 | Msa0695050:intron | 35.0% |
| ! | GATTTAGGACCGAATATAAG+TGG | - | chr4_4:64481910-64481929 | None:intergenic | 35.0% |
| TGTAACTGCACATTCGATTT+AGG | - | chr4_4:64481925-64481944 | None:intergenic | 35.0% | |
| TGATTCTAGTGCTAGAAAAC+AGG | + | chr4_4:64481996-64482015 | Msa0695050:CDS | 35.0% | |
| AACGTTCTAGTATATGTAGG+GGG | + | chr4_4:64482220-64482239 | Msa0695050:intron | 35.0% | |
| GAAATTAGCATAACTGTCGT+TGG | + | chr4_4:64482908-64482927 | Msa0695050:CDS | 35.0% | |
| CCAAATGCAAATAATGTGAC+AGG | - | chr4_4:64483028-64483047 | None:intergenic | 35.0% | |
| CCTGTCACATTATTTGCATT+TGG | + | chr4_4:64483025-64483044 | Msa0695050:CDS | 35.0% | |
| AAGTTAGAATTTCCAACACG+AGG | - | chr4_4:64483055-64483074 | None:intergenic | 35.0% | |
| CGTGTTGGAAATTCTAACTT+TGG | + | chr4_4:64483055-64483074 | Msa0695050:CDS | 35.0% | |
| TCTTCTTGCATATTCAAAGG+TGG | + | chr4_4:64483153-64483172 | Msa0695050:CDS | 35.0% | |
| CTTCTTGCATATTCAAAGGT+GGG | + | chr4_4:64483154-64483173 | Msa0695050:CDS | 35.0% | |
| ATCTAAGTACTTGAAGAGTG+GGG | + | chr4_4:64483204-64483223 | Msa0695050:CDS | 35.0% | |
| AACATGGAGGTTTATTTGCA+TGG | + | chr4_4:64483238-64483257 | Msa0695050:CDS | 35.0% | |
| GTTTATTTGCATGGAATTGC+AGG | + | chr4_4:64483247-64483266 | Msa0695050:CDS | 35.0% | |
| TTCAACAATCTGATGGTACT+TGG | + | chr4_4:64483404-64483423 | Msa0695050:CDS | 35.0% | |
| AGAACATGGAGAGAACTTAG+TGG | + | chr4_4:64481253-64481272 | Msa0695050:CDS | 40.0% | |
| AGTGGCAAAAGTAAGTGGAA+AGG | + | chr4_4:64481271-64481290 | Msa0695050:CDS | 40.0% | |
| !! | GAAAAGGCATCTAAGTATGC+AGG | + | chr4_4:64481382-64481401 | Msa0695050:CDS | 40.0% |
| TTCAAAGGATGCTTGGAGTA+TGG | + | chr4_4:64481546-64481565 | Msa0695050:CDS | 40.0% | |
| ! | ACATAGTTGTTGCTTGGAGA+GGG | + | chr4_4:64481830-64481849 | Msa0695050:CDS | 40.0% |
| GATCCTGCACCACTTATATT+CGG | + | chr4_4:64481898-64481917 | Msa0695050:CDS | 40.0% | |
| TCGAATGTGCAGTTACACAA+TGG | + | chr4_4:64481928-64481947 | Msa0695050:CDS | 40.0% | |
| CTAGCACTAGAATCAGCTAT+TGG | - | chr4_4:64481991-64482010 | None:intergenic | 40.0% | |
| TTCTAGTATATGTAGGGGGT+AGG | + | chr4_4:64482224-64482243 | Msa0695050:intron | 40.0% | |
| TCTAGTATATGTAGGGGGTA+GGG | + | chr4_4:64482225-64482244 | Msa0695050:intron | 40.0% | |
| GTCATTAAGGTAAGTGCCAT+AGG | - | chr4_4:64482673-64482692 | None:intergenic | 40.0% | |
| ATGGCACTTACCTTAATGAC+TGG | + | chr4_4:64482673-64482692 | Msa0695050:intron | 40.0% | |
| TGGCACTTACCTTAATGACT+GGG | + | chr4_4:64482674-64482693 | Msa0695050:intron | 40.0% | |
| AGTTAAAGGCCCAGTCATTA+AGG | - | chr4_4:64482686-64482705 | None:intergenic | 40.0% | |
| AAACGAGATTAGCAGACTTG+TGG | + | chr4_4:64482868-64482887 | Msa0695050:CDS | 40.0% | |
| GAACACAAGGAAGTAAAGGA+GGG | + | chr4_4:64483269-64483288 | Msa0695050:CDS | 40.0% | |
| ATCACATTCCTGAGAATTGG+AGG | + | chr4_4:64483359-64483378 | Msa0695050:CDS | 40.0% | |
| TCACATTCCTGAGAATTGGA+GGG | + | chr4_4:64483360-64483379 | Msa0695050:CDS | 40.0% | |
| GGTATGGTTCAACAATCTGA+TGG | + | chr4_4:64483397-64483416 | Msa0695050:CDS | 40.0% | |
| TGATGGTACTTGGAAGCTAA+TGG | + | chr4_4:64483414-64483433 | Msa0695050:CDS | 40.0% | |
| AGAACATGGAGAGAACTTAG+TGG | + | chr4_4:64481253-64481272 | Msa0695050:CDS | 40.0% | |
| AGTGGCAAAAGTAAGTGGAA+AGG | + | chr4_4:64481271-64481290 | Msa0695050:CDS | 40.0% | |
| !! | GAAAAGGCATCTAAGTATGC+AGG | + | chr4_4:64481382-64481401 | Msa0695050:CDS | 40.0% |
| TTCAAAGGATGCTTGGAGTA+TGG | + | chr4_4:64481546-64481565 | Msa0695050:CDS | 40.0% | |
| ! | ACATAGTTGTTGCTTGGAGA+GGG | + | chr4_4:64481830-64481849 | Msa0695050:CDS | 40.0% |
| GATCCTGCACCACTTATATT+CGG | + | chr4_4:64481898-64481917 | Msa0695050:CDS | 40.0% | |
| TCGAATGTGCAGTTACACAA+TGG | + | chr4_4:64481928-64481947 | Msa0695050:CDS | 40.0% | |
| CTAGCACTAGAATCAGCTAT+TGG | - | chr4_4:64481991-64482010 | None:intergenic | 40.0% | |
| TTCTAGTATATGTAGGGGGT+AGG | + | chr4_4:64482224-64482243 | Msa0695050:intron | 40.0% | |
| TCTAGTATATGTAGGGGGTA+GGG | + | chr4_4:64482225-64482244 | Msa0695050:intron | 40.0% | |
| GTCATTAAGGTAAGTGCCAT+AGG | - | chr4_4:64482673-64482692 | None:intergenic | 40.0% | |
| ATGGCACTTACCTTAATGAC+TGG | + | chr4_4:64482673-64482692 | Msa0695050:intron | 40.0% | |
| TGGCACTTACCTTAATGACT+GGG | + | chr4_4:64482674-64482693 | Msa0695050:intron | 40.0% | |
| AGTTAAAGGCCCAGTCATTA+AGG | - | chr4_4:64482686-64482705 | None:intergenic | 40.0% | |
| AAACGAGATTAGCAGACTTG+TGG | + | chr4_4:64482868-64482887 | Msa0695050:CDS | 40.0% | |
| GAACACAAGGAAGTAAAGGA+GGG | + | chr4_4:64483269-64483288 | Msa0695050:CDS | 40.0% | |
| ATCACATTCCTGAGAATTGG+AGG | + | chr4_4:64483359-64483378 | Msa0695050:CDS | 40.0% | |
| TCACATTCCTGAGAATTGGA+GGG | + | chr4_4:64483360-64483379 | Msa0695050:CDS | 40.0% | |
| GGTATGGTTCAACAATCTGA+TGG | + | chr4_4:64483397-64483416 | Msa0695050:CDS | 40.0% | |
| TGATGGTACTTGGAAGCTAA+TGG | + | chr4_4:64483414-64483433 | Msa0695050:CDS | 40.0% | |
| TGGGTAGCATAGCAAGAACA+TGG | + | chr4_4:64481239-64481258 | Msa0695050:CDS | 45.0% | |
| !! | TAAGGAAGCATTAGGGAGGA+GGG | + | chr4_4:64481807-64481826 | Msa0695050:CDS | 45.0% |
| ! | GACATAGTTGTTGCTTGGAG+AGG | + | chr4_4:64481829-64481848 | Msa0695050:CDS | 45.0% |
| CTAGTATATGTAGGGGGTAG+GGG | + | chr4_4:64482226-64482245 | Msa0695050:intron | 45.0% | |
| !!! | GCTTTTTGAGGTTGCCCTTT+TGG | - | chr4_4:64483001-64483020 | None:intergenic | 45.0% |
| !! | GTGACAGGACATGCTTTTTG+AGG | - | chr4_4:64483013-64483032 | None:intergenic | 45.0% |
| TGCATATTCAAAGGTGGGAG+AGG | + | chr4_4:64483159-64483178 | Msa0695050:CDS | 45.0% | |
| GAGGAATTAGAAATCGACGC+TGG | + | chr4_4:64483178-64483197 | Msa0695050:CDS | 45.0% | |
| ! | TGGGGTTAGTGCACATAACA+TGG | + | chr4_4:64483222-64483241 | Msa0695050:CDS | 45.0% |
| GGTTAGTGCACATAACATGG+AGG | + | chr4_4:64483225-64483244 | Msa0695050:CDS | 45.0% | |
| CATGGAATTGCAGGAACACA+AGG | + | chr4_4:64483256-64483275 | Msa0695050:CDS | 45.0% | |
| GCAGGAACACAAGGAAGTAA+AGG | + | chr4_4:64483265-64483284 | Msa0695050:CDS | 45.0% | |
| GGAACACAAGGAAGTAAAGG+AGG | + | chr4_4:64483268-64483287 | Msa0695050:CDS | 45.0% | |
| TGGGTAGCATAGCAAGAACA+TGG | + | chr4_4:64481239-64481258 | Msa0695050:CDS | 45.0% | |
| !! | TAAGGAAGCATTAGGGAGGA+GGG | + | chr4_4:64481807-64481826 | Msa0695050:CDS | 45.0% |
| ! | GACATAGTTGTTGCTTGGAG+AGG | + | chr4_4:64481829-64481848 | Msa0695050:CDS | 45.0% |
| CTAGTATATGTAGGGGGTAG+GGG | + | chr4_4:64482226-64482245 | Msa0695050:intron | 45.0% | |
| !!! | GCTTTTTGAGGTTGCCCTTT+TGG | - | chr4_4:64483001-64483020 | None:intergenic | 45.0% |
| !! | GTGACAGGACATGCTTTTTG+AGG | - | chr4_4:64483013-64483032 | None:intergenic | 45.0% |
| TGCATATTCAAAGGTGGGAG+AGG | + | chr4_4:64483159-64483178 | Msa0695050:CDS | 45.0% | |
| GAGGAATTAGAAATCGACGC+TGG | + | chr4_4:64483178-64483197 | Msa0695050:CDS | 45.0% | |
| ! | TGGGGTTAGTGCACATAACA+TGG | + | chr4_4:64483222-64483241 | Msa0695050:CDS | 45.0% |
| GGTTAGTGCACATAACATGG+AGG | + | chr4_4:64483225-64483244 | Msa0695050:CDS | 45.0% | |
| CATGGAATTGCAGGAACACA+AGG | + | chr4_4:64483256-64483275 | Msa0695050:CDS | 45.0% | |
| GCAGGAACACAAGGAAGTAA+AGG | + | chr4_4:64483265-64483284 | Msa0695050:CDS | 45.0% | |
| GGAACACAAGGAAGTAAAGG+AGG | + | chr4_4:64483268-64483287 | Msa0695050:CDS | 45.0% | |
| CGCTGCACTATCTCTTGCTT+TGG | - | chr4_4:64481506-64481525 | None:intergenic | 50.0% | |
| ! | GTTGCTGTTGCCACTGATGA+AGG | + | chr4_4:64481589-64481608 | Msa0695050:CDS | 50.0% |
| !! | CAGCTAAGGAAGCATTAGGG+AGG | + | chr4_4:64481803-64481822 | Msa0695050:intron | 50.0% |
| !! | CTAAGGAAGCATTAGGGAGG+AGG | + | chr4_4:64481806-64481825 | Msa0695050:CDS | 50.0% |
| GGAGGGACATAGTTGTTGCT+TGG | + | chr4_4:64481824-64481843 | Msa0695050:CDS | 50.0% | |
| TGCTTGGAGAGGGACAATTC+AGG | + | chr4_4:64481840-64481859 | Msa0695050:CDS | 50.0% | |
| GCTTGGAGAGGGACAATTCA+GGG | + | chr4_4:64481841-64481860 | Msa0695050:CDS | 50.0% | |
| GACAATTCAGGGTGCAGAGT+GGG | + | chr4_4:64481852-64481871 | Msa0695050:CDS | 50.0% | |
| GGACCGAATATAAGTGGTGC+AGG | - | chr4_4:64481904-64481923 | None:intergenic | 50.0% | |
| AACTGTCGTTGGACACAGCT+TGG | + | chr4_4:64482919-64482938 | Msa0695050:CDS | 50.0% | |
| ACTGTCGTTGGACACAGCTT+GGG | + | chr4_4:64482920-64482939 | Msa0695050:CDS | 50.0% | |
| ! | GCATTTGGTTCACCTCGTGT+TGG | + | chr4_4:64483040-64483059 | Msa0695050:CDS | 50.0% |
| CATTCCTGAGAATTGGAGGG+TGG | + | chr4_4:64483363-64483382 | Msa0695050:CDS | 50.0% | |
| !! | TTGGAGGGTGGTGGAGAATA+AGG | + | chr4_4:64483375-64483394 | Msa0695050:CDS | 50.0% |
| !! | TGGAGGGTGGTGGAGAATAA+GGG | + | chr4_4:64483376-64483395 | Msa0695050:CDS | 50.0% |
| !! | GGTGGTGGAGAATAAGGGTA+TGG | + | chr4_4:64483381-64483400 | Msa0695050:CDS | 50.0% |
| CGCTGCACTATCTCTTGCTT+TGG | - | chr4_4:64481506-64481525 | None:intergenic | 50.0% | |
| ! | GTTGCTGTTGCCACTGATGA+AGG | + | chr4_4:64481589-64481608 | Msa0695050:CDS | 50.0% |
| !! | CAGCTAAGGAAGCATTAGGG+AGG | + | chr4_4:64481803-64481822 | Msa0695050:intron | 50.0% |
| !! | CTAAGGAAGCATTAGGGAGG+AGG | + | chr4_4:64481806-64481825 | Msa0695050:CDS | 50.0% |
| GGAGGGACATAGTTGTTGCT+TGG | + | chr4_4:64481824-64481843 | Msa0695050:CDS | 50.0% | |
| TGCTTGGAGAGGGACAATTC+AGG | + | chr4_4:64481840-64481859 | Msa0695050:CDS | 50.0% | |
| GCTTGGAGAGGGACAATTCA+GGG | + | chr4_4:64481841-64481860 | Msa0695050:CDS | 50.0% | |
| GACAATTCAGGGTGCAGAGT+GGG | + | chr4_4:64481852-64481871 | Msa0695050:CDS | 50.0% | |
| GGACCGAATATAAGTGGTGC+AGG | - | chr4_4:64481904-64481923 | None:intergenic | 50.0% | |
| AACTGTCGTTGGACACAGCT+TGG | + | chr4_4:64482919-64482938 | Msa0695050:CDS | 50.0% | |
| ACTGTCGTTGGACACAGCTT+GGG | + | chr4_4:64482920-64482939 | Msa0695050:CDS | 50.0% | |
| ! | GCATTTGGTTCACCTCGTGT+TGG | + | chr4_4:64483040-64483059 | Msa0695050:CDS | 50.0% |
| CATTCCTGAGAATTGGAGGG+TGG | + | chr4_4:64483363-64483382 | Msa0695050:CDS | 50.0% | |
| !! | TTGGAGGGTGGTGGAGAATA+AGG | + | chr4_4:64483375-64483394 | Msa0695050:CDS | 50.0% |
| !! | TGGAGGGTGGTGGAGAATAA+GGG | + | chr4_4:64483376-64483395 | Msa0695050:CDS | 50.0% |
| !! | GGTGGTGGAGAATAAGGGTA+TGG | + | chr4_4:64483381-64483400 | Msa0695050:CDS | 50.0% |
| GGACAATTCAGGGTGCAGAG+TGG | + | chr4_4:64481851-64481870 | Msa0695050:CDS | 55.0% | |
| TCCTGAGAATTGGAGGGTGG+TGG | + | chr4_4:64483366-64483385 | Msa0695050:CDS | 55.0% | |
| TCCACCACCCTCCAATTCTC+AGG | - | chr4_4:64483370-64483389 | None:intergenic | 55.0% | |
| GGACAATTCAGGGTGCAGAG+TGG | + | chr4_4:64481851-64481870 | Msa0695050:CDS | 55.0% | |
| TCCTGAGAATTGGAGGGTGG+TGG | + | chr4_4:64483366-64483385 | Msa0695050:CDS | 55.0% | |
| TCCACCACCCTCCAATTCTC+AGG | - | chr4_4:64483370-64483389 | None:intergenic | 55.0% | |
| GTCGTTGGACACAGCTTGGG+TGG | + | chr4_4:64482923-64482942 | Msa0695050:CDS | 60.0% | |
| GTCGTTGGACACAGCTTGGG+TGG | + | chr4_4:64482923-64482942 | Msa0695050:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 64481238 | 64483480 | 64481238 | ID=Msa0695050;Name=Msa0695050 |
| chr4_4 | mRNA | 64481238 | 64483480 | 64481238 | ID=Msa0695050-mRNA-1;Parent=Msa0695050;Name=Msa0695050-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|0|0|1|1|1|3|0|400 |
| chr4_4 | exon | 64481238 | 64481610 | 64481238 | ID=Msa0695050-mRNA-1:exon:18495;Parent=Msa0695050-mRNA-1 |
| chr4_4 | exon | 64481806 | 64482017 | 64481806 | ID=Msa0695050-mRNA-1:exon:18496;Parent=Msa0695050-mRNA-1 |
| chr4_4 | exon | 64482863 | 64483480 | 64482863 | ID=Msa0695050-mRNA-1:exon:18497;Parent=Msa0695050-mRNA-1 |
| chr4_4 | CDS | 64481238 | 64481610 | 64481238 | ID=Msa0695050-mRNA-1:cds;Parent=Msa0695050-mRNA-1 |
| chr4_4 | CDS | 64481806 | 64482017 | 64481806 | ID=Msa0695050-mRNA-1:cds;Parent=Msa0695050-mRNA-1 |
| chr4_4 | CDS | 64482863 | 64483480 | 64482863 | ID=Msa0695050-mRNA-1:cds;Parent=Msa0695050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
