Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1430350 | XP_003608122.2 | 91.250 | 400 | 16 | 2 | 1 | 381 | 1 | 400 | 0.0 | 742 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1430350 | sp|O49523|DSEL_ARATH | 50.505 | 396 | 169 | 7 | 4 | 373 | 19 | 413 | 5.87e-132 | 387 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1430350 | G7JPP4 | 91.250 | 400 | 16 | 2 | 1 | 381 | 1 | 400 | 0.0 | 742 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0612220 | Msa1430350 | 0.969697 | 1.663984e-130 | -8.615850e-47 |
| Msa0632980 | Msa1430350 | 0.800807 | 1.212046e-48 | -8.615850e-47 |
| Msa0695050 | Msa1430350 | 0.893898 | 4.092194e-75 | -8.615850e-47 |
| Msa1319010 | Msa1430350 | 0.840685 | 7.492220e-58 | -8.615850e-47 |
| Msa0998780 | Msa1430350 | 0.816435 | 5.539183e-52 | -8.615850e-47 |
| Msa1048400 | Msa1430350 | 0.801116 | 1.047881e-48 | -8.615850e-47 |
| Msa1064940 | Msa1430350 | 0.815259 | 1.013020e-51 | -8.615850e-47 |
| Msa0242830 | Msa1430350 | 0.805572 | 1.251085e-49 | -8.615850e-47 |
| Msa0326770 | Msa1430350 | 0.802503 | 5.440322e-49 | -8.615850e-47 |
| Msa0594630 | Msa1430350 | 0.825452 | 4.652047e-54 | -8.615850e-47 |
| Msa0898970 | Msa1430350 | 0.810272 | 1.251452e-50 | -8.615850e-47 |
| Msa0918580 | Msa1430350 | 0.813439 | 2.558233e-51 | -8.615850e-47 |
| Msa0945370 | Msa1430350 | 0.968644 | 5.690679e-129 | -8.615850e-47 |
| Msa0964510 | Msa1430350 | 0.808702 | 2.719812e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1430350 | MtrunA17_Chr4g0046011 | 91.250 | 400 | 16 | 2 | 1 | 381 | 1 | 400 | 0.0 | 742 |
| Msa1430350 | MtrunA17_Chr4g0046001 | 86.935 | 398 | 33 | 2 | 1 | 379 | 10 | 407 | 0.0 | 709 |
| Msa1430350 | MtrunA17_Chr2g0283561 | 57.828 | 396 | 140 | 6 | 3 | 373 | 38 | 431 | 6.02e-158 | 451 |
| Msa1430350 | MtrunA17_Chr4g0039301 | 36.866 | 434 | 213 | 12 | 1 | 381 | 97 | 522 | 1.12e-84 | 267 |
| Msa1430350 | MtrunA17_Chr4g0041311 | 38.235 | 408 | 191 | 9 | 7 | 364 | 31 | 427 | 7.97e-84 | 262 |
| Msa1430350 | MtrunA17_Chr7g0260671 | 35.392 | 421 | 216 | 9 | 4 | 374 | 74 | 488 | 2.06e-79 | 252 |
| Msa1430350 | MtrunA17_Chr7g0260681 | 33.428 | 353 | 185 | 8 | 4 | 312 | 74 | 420 | 4.65e-59 | 197 |
| Msa1430350 | MtrunA17_Chr7g0214711 | 38.168 | 262 | 119 | 8 | 4 | 246 | 105 | 342 | 6.26e-47 | 167 |
| Msa1430350 | MtrunA17_Chr5g0399641 | 31.316 | 380 | 192 | 12 | 4 | 331 | 135 | 497 | 1.65e-43 | 158 |
| Msa1430350 | MtrunA17_Chr7g0250611 | 32.337 | 368 | 183 | 15 | 3 | 326 | 74 | 419 | 1.25e-42 | 154 |
| Msa1430350 | MtrunA17_Chr4g0055691 | 32.626 | 377 | 184 | 13 | 3 | 331 | 128 | 482 | 1.95e-40 | 149 |
| Msa1430350 | MtrunA17_Chr7g0250561 | 29.825 | 399 | 191 | 16 | 4 | 330 | 69 | 450 | 1.58e-36 | 137 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1430350 | AT4G18550.1 | 50.505 | 396 | 169 | 7 | 4 | 373 | 19 | 413 | 5.96e-133 | 387 |
| Msa1430350 | AT4G18550.2 | 50.505 | 396 | 169 | 7 | 4 | 373 | 36 | 430 | 7.78e-133 | 387 |
| Msa1430350 | AT1G06250.1 | 47.044 | 389 | 179 | 6 | 4 | 366 | 5 | 392 | 1.26e-119 | 353 |
| Msa1430350 | AT4G18550.3 | 51.661 | 271 | 115 | 5 | 4 | 261 | 36 | 303 | 4.24e-92 | 279 |
| Msa1430350 | AT1G06250.2 | 48.561 | 278 | 128 | 4 | 104 | 366 | 1 | 278 | 2.78e-82 | 254 |
| Msa1430350 | AT1G51440.1 | 38.902 | 419 | 193 | 14 | 3 | 368 | 86 | 494 | 2.97e-80 | 255 |
| Msa1430350 | AT1G06800.1 | 37.529 | 429 | 206 | 16 | 7 | 381 | 88 | 508 | 3.91e-77 | 247 |
| Msa1430350 | AT2G30550.2 | 37.292 | 421 | 203 | 14 | 7 | 374 | 104 | 516 | 1.06e-76 | 246 |
| Msa1430350 | AT2G42690.1 | 35.523 | 411 | 210 | 10 | 1 | 366 | 1 | 401 | 7.83e-69 | 223 |
| Msa1430350 | AT1G30370.1 | 34.815 | 405 | 207 | 13 | 4 | 364 | 114 | 505 | 5.67e-68 | 223 |
| Msa1430350 | AT2G30550.1 | 36.827 | 353 | 168 | 13 | 7 | 312 | 104 | 448 | 5.20e-60 | 201 |
| Msa1430350 | AT1G06800.2 | 37.465 | 355 | 166 | 15 | 7 | 313 | 88 | 434 | 5.50e-60 | 200 |
| Msa1430350 | AT2G31690.1 | 37.354 | 257 | 135 | 6 | 4 | 246 | 88 | 332 | 1.00e-47 | 169 |
| Msa1430350 | AT1G05800.1 | 33.333 | 363 | 183 | 12 | 4 | 327 | 80 | 422 | 1.79e-47 | 168 |
| Msa1430350 | AT4G16820.1 | 33.419 | 389 | 179 | 16 | 8 | 342 | 131 | 493 | 1.93e-42 | 155 |
| Msa1430350 | AT2G44810.2 | 29.659 | 381 | 187 | 12 | 4 | 326 | 86 | 443 | 4.32e-39 | 145 |
| Msa1430350 | AT2G44810.1 | 29.600 | 375 | 183 | 12 | 10 | 326 | 2 | 353 | 2.03e-37 | 139 |
Find 82 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGAGGGTGGTGGAGAATA+AGG | 0.186405 | tig0026647:+57426 | Msa1430350:CDS |
| TCCAAAGTATATTTGGAAAA+AGG | 0.200965 | tig0026647:+55486 | Msa1430350:CDS |
| TGTAACTGCACATTCGATTT+AGG | 0.218692 | tig0026647:-55972 | None:intergenic |
| TATGCAAGAAGAAGACTATT+TGG | 0.263873 | tig0026647:-57193 | None:intergenic |
| TAATTGTCGTTATTCTAAAA+AGG | 0.269491 | tig0026647:+55455 | Msa1430350:CDS |
| CGTAAGTACTTACTACATTA+TGG | 0.283055 | tig0026647:+55372 | Msa1430350:CDS |
| TAAAGGAGGGTTTAATTTAG+AGG | 0.288625 | tig0026647:+57333 | Msa1430350:CDS |
| TTAACAGCTAAGGAAGCATT+AGG | 0.303858 | tig0026647:+55849 | Msa1430350:intron |
| CCTGTCACATTATTTGCATT+TGG | 0.305993 | tig0026647:+57075 | Msa1430350:CDS |
| TTCAAAGGATGCTTGGAGTA+TGG | 0.306662 | tig0026647:+55596 | Msa1430350:CDS |
| CGCTGCACTATCTCTTGCTT+TGG | 0.312823 | tig0026647:-55553 | None:intergenic |
| AATCATGCGTTCTAAATTGT+AGG | 0.336214 | tig0026647:+57510 | Msa1430350:CDS |
| GTTTATTTGCATGGAATTGC+AGG | 0.337895 | tig0026647:+57298 | Msa1430350:CDS |
| CTTGGAGTATGGAAACAAAT+TGG | 0.350231 | tig0026647:+55607 | Msa1430350:CDS |
| AATATCACATTCCTGAGAAT+TGG | 0.362474 | tig0026647:+57407 | Msa1430350:CDS |
| CTAGCACTAGAATCAGCTAT+TGG | 0.371790 | tig0026647:-56038 | None:intergenic |
| TGCTTGGAGAGGGACAATTC+AGG | 0.376867 | tig0026647:+55890 | Msa1430350:CDS |
| GATCCTGCACCACTTATATT+CGG | 0.398511 | tig0026647:+55948 | Msa1430350:CDS |
| TGATGGTACTTGGAAGCTAA+TGG | 0.402739 | tig0026647:+57465 | Msa1430350:CDS |
| AATAAATTCAACATACCAAA+AGG | 0.412590 | tig0026647:+57033 | Msa1430350:CDS |
| AAGTAAGTGGAAAGGTCTAT+TGG | 0.420412 | tig0026647:+55329 | Msa1430350:CDS |
| ACTTGCAACTATAAGTTCTA+TGG | 0.425826 | tig0026647:+56999 | Msa1430350:CDS |
| GGATGTTGCATACAAATACT+TGG | 0.442993 | tig0026647:-55532 | None:intergenic |
| TTTGCTCAAGCTACATATGA+TGG | 0.446546 | tig0026647:+55399 | Msa1430350:CDS |
| TAACAGCTAAGGAAGCATTA+GGG | 0.450387 | tig0026647:+55850 | Msa1430350:intron |
| TGGAGGGTGGTGGAGAATAA+GGG | 0.455462 | tig0026647:+57427 | Msa1430350:CDS |
| TGATTCTAGTGCTAGAAAAC+AGG | 0.455743 | tig0026647:+56046 | Msa1430350:CDS |
| TTCAACAATCTGATGGTACT+TGG | 0.456136 | tig0026647:+57455 | Msa1430350:CDS |
| AACATGGAGGTTTATTTGCA+TGG | 0.461774 | tig0026647:+57289 | Msa1430350:CDS |
| CTATTAAACAAAAGTAATGA+TGG | 0.464521 | tig0026647:+57373 | Msa1430350:CDS |
| AATCTAAGTACTTGAAGAGT+GGG | 0.469182 | tig0026647:+57254 | Msa1430350:CDS |
| AACTGTCGTTGGACACAGCT+TGG | 0.475044 | tig0026647:+56969 | Msa1430350:CDS |
| TCCACCACCCTCCAATTCTC+AGG | 0.477117 | tig0026647:-57418 | None:intergenic |
| TTGGTCACAGAATACTTGTA+AGG | 0.480981 | tig0026647:-55513 | None:intergenic |
| GGAGGGACATAGTTGTTGCT+TGG | 0.481190 | tig0026647:+55874 | Msa1430350:CDS |
| GCTTGGAGAGGGACAATTCA+GGG | 0.489035 | tig0026647:+55891 | Msa1430350:CDS |
| TGCATATTCAAAGGTGGGAG+AGG | 0.502064 | tig0026647:+57210 | Msa1430350:CDS |
| CTTCTTGCATATTCAAAGGT+GGG | 0.504433 | tig0026647:+57205 | Msa1430350:CDS |
| GAGTATGGAAACAAATTGGA+TGG | 0.512934 | tig0026647:+55611 | Msa1430350:CDS |
| ACTGTCGTTGGACACAGCTT+GGG | 0.515205 | tig0026647:+56970 | Msa1430350:CDS |
| GACAATTCAGGGTGCAGAGT+GGG | 0.520098 | tig0026647:+55902 | Msa1430350:CDS |
| GGACCGAATATAAGTGGTGC+AGG | 0.524592 | tig0026647:-55951 | None:intergenic |
| TCCTGAGAATTGGAGGGTGG+TGG | 0.527608 | tig0026647:+57417 | Msa1430350:CDS |
| CATGGAATTGCAGGAACACA+AGG | 0.532517 | tig0026647:+57307 | Msa1430350:CDS |
| ACATAGTTGTTGCTTGGAGA+GGG | 0.533659 | tig0026647:+55880 | Msa1430350:CDS |
| CTAAGGAAGCATTAGGGAGG+AGG | 0.534094 | tig0026647:+55856 | Msa1430350:CDS |
| AACTTAGTGGCAAAAGTAAG+TGG | 0.534655 | tig0026647:+55316 | Msa1430350:CDS |
| ATCACATTCCTGAGAATTGG+AGG | 0.536099 | tig0026647:+57410 | Msa1430350:CDS |
| GAAATTAGCATAACTGTCGT+TGG | 0.536154 | tig0026647:+56958 | Msa1430350:CDS |
| TCTTCTTGCATATTCAAAGG+TGG | 0.538213 | tig0026647:+57204 | Msa1430350:CDS |
| GCAGGAACACAAGGAAGTAA+AGG | 0.539942 | tig0026647:+57316 | Msa1430350:CDS |
| GATTTAGGACCGAATATAAG+TGG | 0.540170 | tig0026647:-55957 | None:intergenic |
| CCAAATGCAAATAATGTGAC+AGG | 0.540189 | tig0026647:-57075 | None:intergenic |
| TCTTCTTCTTGCATATTCAA+AGG | 0.541516 | tig0026647:+57201 | Msa1430350:CDS |
| AAACGAGATTAGCAGACTTG+TGG | 0.547519 | tig0026647:+56918 | Msa1430350:CDS |
| TGGGGTTAGTGCACATAACA+TGG | 0.566949 | tig0026647:+57273 | Msa1430350:CDS |
| AGTATGGAAACAAATTGGAT+GGG | 0.568664 | tig0026647:+55612 | Msa1430350:CDS |
| AAATCTAAGTACTTGAAGAG+TGG | 0.574558 | tig0026647:+57253 | Msa1430350:CDS |
| GACATAGTTGTTGCTTGGAG+AGG | 0.575425 | tig0026647:+55879 | Msa1430350:CDS |
| GTTGCTGTTGCCACTGATGA+AGG | 0.576148 | tig0026647:+55639 | Msa1430350:CDS |
| TTCAACATTACCTTCATCAG+TGG | 0.579087 | tig0026647:-55649 | None:intergenic |
| ATAAATTCAACATACCAAAA+GGG | 0.580395 | tig0026647:+57034 | Msa1430350:CDS |
| GGTGGTGGAGAATAAGGGTA+TGG | 0.582115 | tig0026647:+57432 | Msa1430350:CDS |
| TAAGGAAGCATTAGGGAGGA+GGG | 0.586465 | tig0026647:+55857 | Msa1430350:CDS |
| TTACGTAGGTCAATGTGTAA+AGG | 0.596130 | tig0026647:-55354 | None:intergenic |
| GGAACACAAGGAAGTAAAGG+AGG | 0.618211 | tig0026647:+57319 | Msa1430350:CDS |
| GGTATGGTTCAACAATCTGA+TGG | 0.619750 | tig0026647:+57448 | Msa1430350:CDS |
| AGTGGCAAAAGTAAGTGGAA+AGG | 0.625837 | tig0026647:+55321 | Msa1430350:CDS |
| GTATGGAAACAAATTGGATG+GGG | 0.630148 | tig0026647:+55613 | Msa1430350:CDS |
| TCGAATGTGCAGTTACACAA+TGG | 0.630838 | tig0026647:+55978 | Msa1430350:CDS |
| TGGGTAGCATAGCAAGAACA+TGG | 0.635845 | tig0026647:+55289 | Msa1430350:CDS |
| GTCGTTGGACACAGCTTGGG+TGG | 0.639883 | tig0026647:+56973 | Msa1430350:CDS |
| AGAACATGGAGAGAACTTAG+TGG | 0.643312 | tig0026647:+55303 | Msa1430350:CDS |
| GAGGAATTAGAAATCGACGC+TGG | 0.655608 | tig0026647:+57229 | Msa1430350:CDS |
| TCACATTCCTGAGAATTGGA+GGG | 0.659641 | tig0026647:+57411 | Msa1430350:CDS |
| ATCTAAGTACTTGAAGAGTG+GGG | 0.675113 | tig0026647:+57255 | Msa1430350:CDS |
| CATTCCTGAGAATTGGAGGG+TGG | 0.687333 | tig0026647:+57414 | Msa1430350:CDS |
| GAACACAAGGAAGTAAAGGA+GGG | 0.689646 | tig0026647:+57320 | Msa1430350:CDS |
| AATGTAGTAAGTACTTACGT+AGG | 0.694414 | tig0026647:-55368 | None:intergenic |
| CAGCTAAGGAAGCATTAGGG+AGG | 0.703114 | tig0026647:+55853 | Msa1430350:intron |
| GGACAATTCAGGGTGCAGAG+TGG | 0.708525 | tig0026647:+55901 | Msa1430350:CDS |
| GGTTAGTGCACATAACATGG+AGG | 0.759022 | tig0026647:+57276 | Msa1430350:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCAAAATTTTAATATTGATT+TGG | + | tig0026647:55926-55945 | Msa1430350:CDS | 10.0% |
| !!! | TATAGAAATCATTTTTTTAA+AGG | + | tig0026647:56537-56556 | Msa1430350:intron | 10.0% |
| !!! | AAAAAAAGTATAACTTTTTT+TGG | + | tig0026647:56643-56662 | Msa1430350:intron | 10.0% |
| !!! | TTTAATTTTACTATGTATTT+AGG | - | tig0026647:56689-56708 | None:intergenic | 10.0% |
| !!! | TCAAAATTTTAATATTGATT+TGG | + | tig0026647:55926-55945 | Msa1430350:CDS | 10.0% |
| !!! | TATAGAAATCATTTTTTTAA+AGG | + | tig0026647:56537-56556 | Msa1430350:intron | 10.0% |
| !!! | AAAAAAAGTATAACTTTTTT+TGG | + | tig0026647:56643-56662 | Msa1430350:intron | 10.0% |
| !!! | TTTAATTTTACTATGTATTT+AGG | - | tig0026647:56689-56708 | None:intergenic | 10.0% |
| !!! | TAGAAATTCACTTTTTTTTA+AGG | - | tig0026647:56329-56348 | None:intergenic | 15.0% |
| !! | AACTTAATAAAGAAAACTTT+AGG | - | tig0026647:56478-56497 | None:intergenic | 15.0% |
| !!! | ATATTTATAGTACTTGATTT+TGG | + | tig0026647:56848-56867 | Msa1430350:intron | 15.0% |
| !!! | TAGAAATTCACTTTTTTTTA+AGG | - | tig0026647:56329-56348 | None:intergenic | 15.0% |
| !! | AACTTAATAAAGAAAACTTT+AGG | - | tig0026647:56478-56497 | None:intergenic | 15.0% |
| !!! | ATATTTATAGTACTTGATTT+TGG | + | tig0026647:56848-56867 | Msa1430350:intron | 15.0% |
| !!! | TAATTGTCGTTATTCTAAAA+AGG | + | tig0026647:55455-55474 | Msa1430350:CDS | 20.0% |
| !!! | TTTCTTTTCCAAAGTATATT+TGG | + | tig0026647:55479-55498 | Msa1430350:CDS | 20.0% |
| !!! | CTTAACTTCAATATTTTCAA+AGG | + | tig0026647:55581-55600 | Msa1430350:CDS | 20.0% |
| !! | TATTAGTAAAAGTTGTAAGT+TGG | - | tig0026647:55814-55833 | None:intergenic | 20.0% |
| !!! | TTAAACAATTTTAACAGCTA+AGG | + | tig0026647:55839-55858 | Msa1430350:intron | 20.0% |
| !! | AGCATAACTTAATAATCTTA+AGG | - | tig0026647:56573-56592 | None:intergenic | 20.0% |
| !!! | AGTTATACTTTTTTTGAAGA+AGG | - | tig0026647:56638-56657 | None:intergenic | 20.0% |
| !!! | TACTATGTATTTAGGTTATA+GGG | - | tig0026647:56681-56700 | None:intergenic | 20.0% |
| !!! | TTACTATGTATTTAGGTTAT+AGG | - | tig0026647:56682-56701 | None:intergenic | 20.0% |
| !!! | ATTTAGCTTGAGATTTTTTT+TGG | - | tig0026647:56807-56826 | None:intergenic | 20.0% |
| !!! | GTTTTTTTACATTTGTAATG+TGG | + | tig0026647:56879-56898 | Msa1430350:intron | 20.0% |
| !! | AATAAATTCAACATACCAAA+AGG | + | tig0026647:57033-57052 | Msa1430350:CDS | 20.0% |
| !! | ATAAATTCAACATACCAAAA+GGG | + | tig0026647:57034-57053 | Msa1430350:CDS | 20.0% |
| !! | CTATTAAACAAAAGTAATGA+TGG | + | tig0026647:57373-57392 | Msa1430350:CDS | 20.0% |
| !!! | TAATTGTCGTTATTCTAAAA+AGG | + | tig0026647:55455-55474 | Msa1430350:CDS | 20.0% |
| !!! | TTTCTTTTCCAAAGTATATT+TGG | + | tig0026647:55479-55498 | Msa1430350:CDS | 20.0% |
| !!! | CTTAACTTCAATATTTTCAA+AGG | + | tig0026647:55581-55600 | Msa1430350:CDS | 20.0% |
| !! | TATTAGTAAAAGTTGTAAGT+TGG | - | tig0026647:55814-55833 | None:intergenic | 20.0% |
| !!! | TTAAACAATTTTAACAGCTA+AGG | + | tig0026647:55839-55858 | Msa1430350:intron | 20.0% |
| !! | AGCATAACTTAATAATCTTA+AGG | - | tig0026647:56573-56592 | None:intergenic | 20.0% |
| !!! | AGTTATACTTTTTTTGAAGA+AGG | - | tig0026647:56638-56657 | None:intergenic | 20.0% |
| !!! | TACTATGTATTTAGGTTATA+GGG | - | tig0026647:56681-56700 | None:intergenic | 20.0% |
| !!! | TTACTATGTATTTAGGTTAT+AGG | - | tig0026647:56682-56701 | None:intergenic | 20.0% |
| !!! | ATTTAGCTTGAGATTTTTTT+TGG | - | tig0026647:56807-56826 | None:intergenic | 20.0% |
| !!! | GTTTTTTTACATTTGTAATG+TGG | + | tig0026647:56879-56898 | Msa1430350:intron | 20.0% |
| !! | AATAAATTCAACATACCAAA+AGG | + | tig0026647:57033-57052 | Msa1430350:CDS | 20.0% |
| !! | ATAAATTCAACATACCAAAA+GGG | + | tig0026647:57034-57053 | Msa1430350:CDS | 20.0% |
| !! | CTATTAAACAAAAGTAATGA+TGG | + | tig0026647:57373-57392 | Msa1430350:CDS | 20.0% |
| ! | TCCAAAGTATATTTGGAAAA+AGG | + | tig0026647:55486-55505 | Msa1430350:CDS | 25.0% |
| !! | ACCTTTTTCCAAATATACTT+TGG | - | tig0026647:55490-55509 | None:intergenic | 25.0% |
| ! | AAATTGAGCATAATAAGTGT+AGG | + | tig0026647:55741-55760 | Msa1430350:intron | 25.0% |
| ! | AATTGAGCATAATAAGTGTA+GGG | + | tig0026647:55742-55761 | Msa1430350:intron | 25.0% |
| ! | AGATTTATTGTAGTTTAGCT+AGG | - | tig0026647:55786-55805 | None:intergenic | 25.0% |
| ! | CTAATACTATGTAGCATTAT+CGG | - | tig0026647:56100-56119 | None:intergenic | 25.0% |
| ! | TTAAACGTTCTAGTATATGT+AGG | + | tig0026647:56267-56286 | Msa1430350:intron | 25.0% |
| ! | TAAACGTTCTAGTATATGTA+GGG | + | tig0026647:56268-56287 | Msa1430350:intron | 25.0% |
| !!! | TTTTTTTGTTAAGTAGCACA+TGG | - | tig0026647:56353-56372 | None:intergenic | 25.0% |
| !! | TACTTGAAGTATTATCTTAG+TGG | - | tig0026647:56600-56619 | None:intergenic | 25.0% |
| !! | ACTATGTATTTAGGTTATAG+GGG | - | tig0026647:56680-56699 | None:intergenic | 25.0% |
| !! | TTAAACAAATTTGAGACCTA+TGG | + | tig0026647:56704-56723 | Msa1430350:intron | 25.0% |
| ! | AGCAGAAAAAGTTTAGTTAA+AGG | - | tig0026647:56750-56769 | None:intergenic | 25.0% |
| !!! | TTTAACTAAACTTTTTCTGC+TGG | + | tig0026647:56749-56768 | Msa1430350:intron | 25.0% |
| ! | TTGTAATGTGGCATATATAA+AGG | + | tig0026647:56891-56910 | Msa1430350:intron | 25.0% |
| ! | TTGTTCGTAAATTCTAACTT+TGG | + | tig0026647:57106-57125 | Msa1430350:intron | 25.0% |
| ! | TCCAAAGTATATTTGGAAAA+AGG | + | tig0026647:55486-55505 | Msa1430350:CDS | 25.0% |
| !! | ACCTTTTTCCAAATATACTT+TGG | - | tig0026647:55490-55509 | None:intergenic | 25.0% |
| ! | AAATTGAGCATAATAAGTGT+AGG | + | tig0026647:55741-55760 | Msa1430350:intron | 25.0% |
| ! | AATTGAGCATAATAAGTGTA+GGG | + | tig0026647:55742-55761 | Msa1430350:intron | 25.0% |
| ! | AGATTTATTGTAGTTTAGCT+AGG | - | tig0026647:55786-55805 | None:intergenic | 25.0% |
| ! | CTAATACTATGTAGCATTAT+CGG | - | tig0026647:56100-56119 | None:intergenic | 25.0% |
| ! | TTAAACGTTCTAGTATATGT+AGG | + | tig0026647:56267-56286 | Msa1430350:intron | 25.0% |
| ! | TAAACGTTCTAGTATATGTA+GGG | + | tig0026647:56268-56287 | Msa1430350:intron | 25.0% |
| !!! | TTTTTTTGTTAAGTAGCACA+TGG | - | tig0026647:56353-56372 | None:intergenic | 25.0% |
| !! | TACTTGAAGTATTATCTTAG+TGG | - | tig0026647:56600-56619 | None:intergenic | 25.0% |
| !! | ACTATGTATTTAGGTTATAG+GGG | - | tig0026647:56680-56699 | None:intergenic | 25.0% |
| !! | TTAAACAAATTTGAGACCTA+TGG | + | tig0026647:56704-56723 | Msa1430350:intron | 25.0% |
| ! | AGCAGAAAAAGTTTAGTTAA+AGG | - | tig0026647:56750-56769 | None:intergenic | 25.0% |
| !!! | TTTAACTAAACTTTTTCTGC+TGG | + | tig0026647:56749-56768 | Msa1430350:intron | 25.0% |
| ! | TTGTAATGTGGCATATATAA+AGG | + | tig0026647:56891-56910 | Msa1430350:intron | 25.0% |
| ! | TTGTTCGTAAATTCTAACTT+TGG | + | tig0026647:57106-57125 | Msa1430350:intron | 25.0% |
| AATGTAGTAAGTACTTACGT+AGG | - | tig0026647:55371-55390 | None:intergenic | 30.0% | |
| CGTAAGTACTTACTACATTA+TGG | + | tig0026647:55372-55391 | Msa1430350:CDS | 30.0% | |
| ! | TGATGGTTTCAACTTTGAAA+AGG | + | tig0026647:55416-55435 | Msa1430350:intron | 30.0% |
| ! | CAATATTTTCAAAGGATGCT+TGG | + | tig0026647:55589-55608 | Msa1430350:CDS | 30.0% |
| AGTATGGAAACAAATTGGAT+GGG | + | tig0026647:55612-55631 | Msa1430350:CDS | 30.0% | |
| GAAGGTAATGTTGAAAAGTA+TGG | + | tig0026647:55657-55676 | Msa1430350:intron | 30.0% | |
| AAACGTTCTAGTATATGTAG+GGG | + | tig0026647:56269-56288 | Msa1430350:intron | 30.0% | |
| ACTTGCAACTATAAGTTCTA+TGG | + | tig0026647:56999-57018 | Msa1430350:CDS | 30.0% | |
| TATGCAAGAAGAAGACTATT+TGG | - | tig0026647:57196-57215 | None:intergenic | 30.0% | |
| TCTTCTTCTTGCATATTCAA+AGG | + | tig0026647:57201-57220 | Msa1430350:CDS | 30.0% | |
| AAATCTAAGTACTTGAAGAG+TGG | + | tig0026647:57253-57272 | Msa1430350:CDS | 30.0% | |
| AATCTAAGTACTTGAAGAGT+GGG | + | tig0026647:57254-57273 | Msa1430350:CDS | 30.0% | |
| ! | TAAAGGAGGGTTTAATTTAG+AGG | + | tig0026647:57333-57352 | Msa1430350:CDS | 30.0% |
| AATATCACATTCCTGAGAAT+TGG | + | tig0026647:57407-57426 | Msa1430350:CDS | 30.0% | |
| AATGTAGTAAGTACTTACGT+AGG | - | tig0026647:55371-55390 | None:intergenic | 30.0% | |
| CGTAAGTACTTACTACATTA+TGG | + | tig0026647:55372-55391 | Msa1430350:CDS | 30.0% | |
| ! | TGATGGTTTCAACTTTGAAA+AGG | + | tig0026647:55416-55435 | Msa1430350:intron | 30.0% |
| ! | CAATATTTTCAAAGGATGCT+TGG | + | tig0026647:55589-55608 | Msa1430350:CDS | 30.0% |
| AGTATGGAAACAAATTGGAT+GGG | + | tig0026647:55612-55631 | Msa1430350:CDS | 30.0% | |
| GAAGGTAATGTTGAAAAGTA+TGG | + | tig0026647:55657-55676 | Msa1430350:intron | 30.0% | |
| AAACGTTCTAGTATATGTAG+GGG | + | tig0026647:56269-56288 | Msa1430350:intron | 30.0% | |
| ACTTGCAACTATAAGTTCTA+TGG | + | tig0026647:56999-57018 | Msa1430350:CDS | 30.0% | |
| TATGCAAGAAGAAGACTATT+TGG | - | tig0026647:57196-57215 | None:intergenic | 30.0% | |
| TCTTCTTCTTGCATATTCAA+AGG | + | tig0026647:57201-57220 | Msa1430350:CDS | 30.0% | |
| AAATCTAAGTACTTGAAGAG+TGG | + | tig0026647:57253-57272 | Msa1430350:CDS | 30.0% | |
| AATCTAAGTACTTGAAGAGT+GGG | + | tig0026647:57254-57273 | Msa1430350:CDS | 30.0% | |
| ! | TAAAGGAGGGTTTAATTTAG+AGG | + | tig0026647:57333-57352 | Msa1430350:CDS | 30.0% |
| AATATCACATTCCTGAGAAT+TGG | + | tig0026647:57407-57426 | Msa1430350:CDS | 30.0% | |
| AACTTAGTGGCAAAAGTAAG+TGG | + | tig0026647:55316-55335 | Msa1430350:CDS | 35.0% | |
| AAGTAAGTGGAAAGGTCTAT+TGG | + | tig0026647:55329-55348 | Msa1430350:CDS | 35.0% | |
| TTACGTAGGTCAATGTGTAA+AGG | - | tig0026647:55357-55376 | None:intergenic | 35.0% | |
| TTTGCTCAAGCTACATATGA+TGG | + | tig0026647:55399-55418 | Msa1430350:CDS | 35.0% | |
| TTGGTCACAGAATACTTGTA+AGG | - | tig0026647:55516-55535 | None:intergenic | 35.0% | |
| GGATGTTGCATACAAATACT+TGG | - | tig0026647:55535-55554 | None:intergenic | 35.0% | |
| CTTGGAGTATGGAAACAAAT+TGG | + | tig0026647:55607-55626 | Msa1430350:CDS | 35.0% | |
| GAGTATGGAAACAAATTGGA+TGG | + | tig0026647:55611-55630 | Msa1430350:CDS | 35.0% | |
| GTATGGAAACAAATTGGATG+GGG | + | tig0026647:55613-55632 | Msa1430350:CDS | 35.0% | |
| TTCAACATTACCTTCATCAG+TGG | - | tig0026647:55652-55671 | None:intergenic | 35.0% | |
| !! | TTAACAGCTAAGGAAGCATT+AGG | + | tig0026647:55849-55868 | Msa1430350:intron | 35.0% |
| !! | TAACAGCTAAGGAAGCATTA+GGG | + | tig0026647:55850-55869 | Msa1430350:intron | 35.0% |
| ! | GATTTAGGACCGAATATAAG+TGG | - | tig0026647:55960-55979 | None:intergenic | 35.0% |
| TGTAACTGCACATTCGATTT+AGG | - | tig0026647:55975-55994 | None:intergenic | 35.0% | |
| TGATTCTAGTGCTAGAAAAC+AGG | + | tig0026647:56046-56065 | Msa1430350:CDS | 35.0% | |
| AACGTTCTAGTATATGTAGG+GGG | + | tig0026647:56270-56289 | Msa1430350:intron | 35.0% | |
| GAAATTAGCATAACTGTCGT+TGG | + | tig0026647:56958-56977 | Msa1430350:CDS | 35.0% | |
| CCAAATGCAAATAATGTGAC+AGG | - | tig0026647:57078-57097 | None:intergenic | 35.0% | |
| CCTGTCACATTATTTGCATT+TGG | + | tig0026647:57075-57094 | Msa1430350:CDS | 35.0% | |
| TCTTCTTGCATATTCAAAGG+TGG | + | tig0026647:57204-57223 | Msa1430350:CDS | 35.0% | |
| CTTCTTGCATATTCAAAGGT+GGG | + | tig0026647:57205-57224 | Msa1430350:CDS | 35.0% | |
| ATCTAAGTACTTGAAGAGTG+GGG | + | tig0026647:57255-57274 | Msa1430350:CDS | 35.0% | |
| AACATGGAGGTTTATTTGCA+TGG | + | tig0026647:57289-57308 | Msa1430350:CDS | 35.0% | |
| GTTTATTTGCATGGAATTGC+AGG | + | tig0026647:57298-57317 | Msa1430350:CDS | 35.0% | |
| TTCAACAATCTGATGGTACT+TGG | + | tig0026647:57455-57474 | Msa1430350:CDS | 35.0% | |
| AACTTAGTGGCAAAAGTAAG+TGG | + | tig0026647:55316-55335 | Msa1430350:CDS | 35.0% | |
| AAGTAAGTGGAAAGGTCTAT+TGG | + | tig0026647:55329-55348 | Msa1430350:CDS | 35.0% | |
| TTACGTAGGTCAATGTGTAA+AGG | - | tig0026647:55357-55376 | None:intergenic | 35.0% | |
| TTTGCTCAAGCTACATATGA+TGG | + | tig0026647:55399-55418 | Msa1430350:CDS | 35.0% | |
| TTGGTCACAGAATACTTGTA+AGG | - | tig0026647:55516-55535 | None:intergenic | 35.0% | |
| GGATGTTGCATACAAATACT+TGG | - | tig0026647:55535-55554 | None:intergenic | 35.0% | |
| CTTGGAGTATGGAAACAAAT+TGG | + | tig0026647:55607-55626 | Msa1430350:CDS | 35.0% | |
| GAGTATGGAAACAAATTGGA+TGG | + | tig0026647:55611-55630 | Msa1430350:CDS | 35.0% | |
| GTATGGAAACAAATTGGATG+GGG | + | tig0026647:55613-55632 | Msa1430350:CDS | 35.0% | |
| TTCAACATTACCTTCATCAG+TGG | - | tig0026647:55652-55671 | None:intergenic | 35.0% | |
| !! | TTAACAGCTAAGGAAGCATT+AGG | + | tig0026647:55849-55868 | Msa1430350:intron | 35.0% |
| !! | TAACAGCTAAGGAAGCATTA+GGG | + | tig0026647:55850-55869 | Msa1430350:intron | 35.0% |
| ! | GATTTAGGACCGAATATAAG+TGG | - | tig0026647:55960-55979 | None:intergenic | 35.0% |
| TGTAACTGCACATTCGATTT+AGG | - | tig0026647:55975-55994 | None:intergenic | 35.0% | |
| TGATTCTAGTGCTAGAAAAC+AGG | + | tig0026647:56046-56065 | Msa1430350:CDS | 35.0% | |
| AACGTTCTAGTATATGTAGG+GGG | + | tig0026647:56270-56289 | Msa1430350:intron | 35.0% | |
| GAAATTAGCATAACTGTCGT+TGG | + | tig0026647:56958-56977 | Msa1430350:CDS | 35.0% | |
| CCAAATGCAAATAATGTGAC+AGG | - | tig0026647:57078-57097 | None:intergenic | 35.0% | |
| CCTGTCACATTATTTGCATT+TGG | + | tig0026647:57075-57094 | Msa1430350:CDS | 35.0% | |
| TCTTCTTGCATATTCAAAGG+TGG | + | tig0026647:57204-57223 | Msa1430350:CDS | 35.0% | |
| CTTCTTGCATATTCAAAGGT+GGG | + | tig0026647:57205-57224 | Msa1430350:CDS | 35.0% | |
| ATCTAAGTACTTGAAGAGTG+GGG | + | tig0026647:57255-57274 | Msa1430350:CDS | 35.0% | |
| AACATGGAGGTTTATTTGCA+TGG | + | tig0026647:57289-57308 | Msa1430350:CDS | 35.0% | |
| GTTTATTTGCATGGAATTGC+AGG | + | tig0026647:57298-57317 | Msa1430350:CDS | 35.0% | |
| TTCAACAATCTGATGGTACT+TGG | + | tig0026647:57455-57474 | Msa1430350:CDS | 35.0% | |
| AGAACATGGAGAGAACTTAG+TGG | + | tig0026647:55303-55322 | Msa1430350:CDS | 40.0% | |
| AGTGGCAAAAGTAAGTGGAA+AGG | + | tig0026647:55321-55340 | Msa1430350:CDS | 40.0% | |
| !! | GAAAAGGCATCTAAGTATGC+AGG | + | tig0026647:55432-55451 | Msa1430350:intron | 40.0% |
| TTCAAAGGATGCTTGGAGTA+TGG | + | tig0026647:55596-55615 | Msa1430350:CDS | 40.0% | |
| ! | ACATAGTTGTTGCTTGGAGA+GGG | + | tig0026647:55880-55899 | Msa1430350:CDS | 40.0% |
| GATCCTGCACCACTTATATT+CGG | + | tig0026647:55948-55967 | Msa1430350:CDS | 40.0% | |
| TCGAATGTGCAGTTACACAA+TGG | + | tig0026647:55978-55997 | Msa1430350:CDS | 40.0% | |
| CTAGCACTAGAATCAGCTAT+TGG | - | tig0026647:56041-56060 | None:intergenic | 40.0% | |
| TTCTAGTATATGTAGGGGGT+AGG | + | tig0026647:56274-56293 | Msa1430350:intron | 40.0% | |
| TCTAGTATATGTAGGGGGTA+GGG | + | tig0026647:56275-56294 | Msa1430350:intron | 40.0% | |
| GTCATTAAGGTAAGTGCCAT+AGG | - | tig0026647:56723-56742 | None:intergenic | 40.0% | |
| ATGGCACTTACCTTAATGAC+TGG | + | tig0026647:56723-56742 | Msa1430350:intron | 40.0% | |
| TGGCACTTACCTTAATGACT+GGG | + | tig0026647:56724-56743 | Msa1430350:intron | 40.0% | |
| AGTTAAAGGCCCAGTCATTA+AGG | - | tig0026647:56736-56755 | None:intergenic | 40.0% | |
| AAACGAGATTAGCAGACTTG+TGG | + | tig0026647:56918-56937 | Msa1430350:CDS | 40.0% | |
| GAACACAAGGAAGTAAAGGA+GGG | + | tig0026647:57320-57339 | Msa1430350:CDS | 40.0% | |
| ATCACATTCCTGAGAATTGG+AGG | + | tig0026647:57410-57429 | Msa1430350:CDS | 40.0% | |
| TCACATTCCTGAGAATTGGA+GGG | + | tig0026647:57411-57430 | Msa1430350:CDS | 40.0% | |
| GGTATGGTTCAACAATCTGA+TGG | + | tig0026647:57448-57467 | Msa1430350:CDS | 40.0% | |
| TGATGGTACTTGGAAGCTAA+TGG | + | tig0026647:57465-57484 | Msa1430350:CDS | 40.0% | |
| AGAACATGGAGAGAACTTAG+TGG | + | tig0026647:55303-55322 | Msa1430350:CDS | 40.0% | |
| AGTGGCAAAAGTAAGTGGAA+AGG | + | tig0026647:55321-55340 | Msa1430350:CDS | 40.0% | |
| !! | GAAAAGGCATCTAAGTATGC+AGG | + | tig0026647:55432-55451 | Msa1430350:intron | 40.0% |
| TTCAAAGGATGCTTGGAGTA+TGG | + | tig0026647:55596-55615 | Msa1430350:CDS | 40.0% | |
| ! | ACATAGTTGTTGCTTGGAGA+GGG | + | tig0026647:55880-55899 | Msa1430350:CDS | 40.0% |
| GATCCTGCACCACTTATATT+CGG | + | tig0026647:55948-55967 | Msa1430350:CDS | 40.0% | |
| TCGAATGTGCAGTTACACAA+TGG | + | tig0026647:55978-55997 | Msa1430350:CDS | 40.0% | |
| CTAGCACTAGAATCAGCTAT+TGG | - | tig0026647:56041-56060 | None:intergenic | 40.0% | |
| TTCTAGTATATGTAGGGGGT+AGG | + | tig0026647:56274-56293 | Msa1430350:intron | 40.0% | |
| TCTAGTATATGTAGGGGGTA+GGG | + | tig0026647:56275-56294 | Msa1430350:intron | 40.0% | |
| GTCATTAAGGTAAGTGCCAT+AGG | - | tig0026647:56723-56742 | None:intergenic | 40.0% | |
| ATGGCACTTACCTTAATGAC+TGG | + | tig0026647:56723-56742 | Msa1430350:intron | 40.0% | |
| TGGCACTTACCTTAATGACT+GGG | + | tig0026647:56724-56743 | Msa1430350:intron | 40.0% | |
| AGTTAAAGGCCCAGTCATTA+AGG | - | tig0026647:56736-56755 | None:intergenic | 40.0% | |
| AAACGAGATTAGCAGACTTG+TGG | + | tig0026647:56918-56937 | Msa1430350:CDS | 40.0% | |
| GAACACAAGGAAGTAAAGGA+GGG | + | tig0026647:57320-57339 | Msa1430350:CDS | 40.0% | |
| ATCACATTCCTGAGAATTGG+AGG | + | tig0026647:57410-57429 | Msa1430350:CDS | 40.0% | |
| TCACATTCCTGAGAATTGGA+GGG | + | tig0026647:57411-57430 | Msa1430350:CDS | 40.0% | |
| GGTATGGTTCAACAATCTGA+TGG | + | tig0026647:57448-57467 | Msa1430350:CDS | 40.0% | |
| TGATGGTACTTGGAAGCTAA+TGG | + | tig0026647:57465-57484 | Msa1430350:CDS | 40.0% | |
| TGGGTAGCATAGCAAGAACA+TGG | + | tig0026647:55289-55308 | Msa1430350:CDS | 45.0% | |
| !! | TAAGGAAGCATTAGGGAGGA+GGG | + | tig0026647:55857-55876 | Msa1430350:CDS | 45.0% |
| ! | GACATAGTTGTTGCTTGGAG+AGG | + | tig0026647:55879-55898 | Msa1430350:CDS | 45.0% |
| CTAGTATATGTAGGGGGTAG+GGG | + | tig0026647:56276-56295 | Msa1430350:intron | 45.0% | |
| !!! | GCTTTTTGAGGTTGCCCTTT+TGG | - | tig0026647:57051-57070 | None:intergenic | 45.0% |
| !! | GTGACAGGACATGCTTTTTG+AGG | - | tig0026647:57063-57082 | None:intergenic | 45.0% |
| TGCATATTCAAAGGTGGGAG+AGG | + | tig0026647:57210-57229 | Msa1430350:CDS | 45.0% | |
| GAGGAATTAGAAATCGACGC+TGG | + | tig0026647:57229-57248 | Msa1430350:CDS | 45.0% | |
| ! | TGGGGTTAGTGCACATAACA+TGG | + | tig0026647:57273-57292 | Msa1430350:CDS | 45.0% |
| GGTTAGTGCACATAACATGG+AGG | + | tig0026647:57276-57295 | Msa1430350:CDS | 45.0% | |
| CATGGAATTGCAGGAACACA+AGG | + | tig0026647:57307-57326 | Msa1430350:CDS | 45.0% | |
| GCAGGAACACAAGGAAGTAA+AGG | + | tig0026647:57316-57335 | Msa1430350:CDS | 45.0% | |
| GGAACACAAGGAAGTAAAGG+AGG | + | tig0026647:57319-57338 | Msa1430350:CDS | 45.0% | |
| TGGGTAGCATAGCAAGAACA+TGG | + | tig0026647:55289-55308 | Msa1430350:CDS | 45.0% | |
| !! | TAAGGAAGCATTAGGGAGGA+GGG | + | tig0026647:55857-55876 | Msa1430350:CDS | 45.0% |
| ! | GACATAGTTGTTGCTTGGAG+AGG | + | tig0026647:55879-55898 | Msa1430350:CDS | 45.0% |
| CTAGTATATGTAGGGGGTAG+GGG | + | tig0026647:56276-56295 | Msa1430350:intron | 45.0% | |
| !!! | GCTTTTTGAGGTTGCCCTTT+TGG | - | tig0026647:57051-57070 | None:intergenic | 45.0% |
| !! | GTGACAGGACATGCTTTTTG+AGG | - | tig0026647:57063-57082 | None:intergenic | 45.0% |
| TGCATATTCAAAGGTGGGAG+AGG | + | tig0026647:57210-57229 | Msa1430350:CDS | 45.0% | |
| GAGGAATTAGAAATCGACGC+TGG | + | tig0026647:57229-57248 | Msa1430350:CDS | 45.0% | |
| ! | TGGGGTTAGTGCACATAACA+TGG | + | tig0026647:57273-57292 | Msa1430350:CDS | 45.0% |
| GGTTAGTGCACATAACATGG+AGG | + | tig0026647:57276-57295 | Msa1430350:CDS | 45.0% | |
| CATGGAATTGCAGGAACACA+AGG | + | tig0026647:57307-57326 | Msa1430350:CDS | 45.0% | |
| GCAGGAACACAAGGAAGTAA+AGG | + | tig0026647:57316-57335 | Msa1430350:CDS | 45.0% | |
| GGAACACAAGGAAGTAAAGG+AGG | + | tig0026647:57319-57338 | Msa1430350:CDS | 45.0% | |
| CGCTGCACTATCTCTTGCTT+TGG | - | tig0026647:55556-55575 | None:intergenic | 50.0% | |
| ! | GTTGCTGTTGCCACTGATGA+AGG | + | tig0026647:55639-55658 | Msa1430350:CDS | 50.0% |
| !! | CAGCTAAGGAAGCATTAGGG+AGG | + | tig0026647:55853-55872 | Msa1430350:intron | 50.0% |
| !! | CTAAGGAAGCATTAGGGAGG+AGG | + | tig0026647:55856-55875 | Msa1430350:CDS | 50.0% |
| GGAGGGACATAGTTGTTGCT+TGG | + | tig0026647:55874-55893 | Msa1430350:CDS | 50.0% | |
| TGCTTGGAGAGGGACAATTC+AGG | + | tig0026647:55890-55909 | Msa1430350:CDS | 50.0% | |
| GCTTGGAGAGGGACAATTCA+GGG | + | tig0026647:55891-55910 | Msa1430350:CDS | 50.0% | |
| GACAATTCAGGGTGCAGAGT+GGG | + | tig0026647:55902-55921 | Msa1430350:CDS | 50.0% | |
| GGACCGAATATAAGTGGTGC+AGG | - | tig0026647:55954-55973 | None:intergenic | 50.0% | |
| AACTGTCGTTGGACACAGCT+TGG | + | tig0026647:56969-56988 | Msa1430350:CDS | 50.0% | |
| ACTGTCGTTGGACACAGCTT+GGG | + | tig0026647:56970-56989 | Msa1430350:CDS | 50.0% | |
| CATTCCTGAGAATTGGAGGG+TGG | + | tig0026647:57414-57433 | Msa1430350:CDS | 50.0% | |
| !! | TTGGAGGGTGGTGGAGAATA+AGG | + | tig0026647:57426-57445 | Msa1430350:CDS | 50.0% |
| !! | TGGAGGGTGGTGGAGAATAA+GGG | + | tig0026647:57427-57446 | Msa1430350:CDS | 50.0% |
| !! | GGTGGTGGAGAATAAGGGTA+TGG | + | tig0026647:57432-57451 | Msa1430350:CDS | 50.0% |
| CGCTGCACTATCTCTTGCTT+TGG | - | tig0026647:55556-55575 | None:intergenic | 50.0% | |
| ! | GTTGCTGTTGCCACTGATGA+AGG | + | tig0026647:55639-55658 | Msa1430350:CDS | 50.0% |
| !! | CAGCTAAGGAAGCATTAGGG+AGG | + | tig0026647:55853-55872 | Msa1430350:intron | 50.0% |
| !! | CTAAGGAAGCATTAGGGAGG+AGG | + | tig0026647:55856-55875 | Msa1430350:CDS | 50.0% |
| GGAGGGACATAGTTGTTGCT+TGG | + | tig0026647:55874-55893 | Msa1430350:CDS | 50.0% | |
| TGCTTGGAGAGGGACAATTC+AGG | + | tig0026647:55890-55909 | Msa1430350:CDS | 50.0% | |
| GCTTGGAGAGGGACAATTCA+GGG | + | tig0026647:55891-55910 | Msa1430350:CDS | 50.0% | |
| GACAATTCAGGGTGCAGAGT+GGG | + | tig0026647:55902-55921 | Msa1430350:CDS | 50.0% | |
| GGACCGAATATAAGTGGTGC+AGG | - | tig0026647:55954-55973 | None:intergenic | 50.0% | |
| AACTGTCGTTGGACACAGCT+TGG | + | tig0026647:56969-56988 | Msa1430350:CDS | 50.0% | |
| ACTGTCGTTGGACACAGCTT+GGG | + | tig0026647:56970-56989 | Msa1430350:CDS | 50.0% | |
| CATTCCTGAGAATTGGAGGG+TGG | + | tig0026647:57414-57433 | Msa1430350:CDS | 50.0% | |
| !! | TTGGAGGGTGGTGGAGAATA+AGG | + | tig0026647:57426-57445 | Msa1430350:CDS | 50.0% |
| !! | TGGAGGGTGGTGGAGAATAA+GGG | + | tig0026647:57427-57446 | Msa1430350:CDS | 50.0% |
| !! | GGTGGTGGAGAATAAGGGTA+TGG | + | tig0026647:57432-57451 | Msa1430350:CDS | 50.0% |
| GGACAATTCAGGGTGCAGAG+TGG | + | tig0026647:55901-55920 | Msa1430350:CDS | 55.0% | |
| TCCTGAGAATTGGAGGGTGG+TGG | + | tig0026647:57417-57436 | Msa1430350:CDS | 55.0% | |
| TCCACCACCCTCCAATTCTC+AGG | - | tig0026647:57421-57440 | None:intergenic | 55.0% | |
| GGACAATTCAGGGTGCAGAG+TGG | + | tig0026647:55901-55920 | Msa1430350:CDS | 55.0% | |
| TCCTGAGAATTGGAGGGTGG+TGG | + | tig0026647:57417-57436 | Msa1430350:CDS | 55.0% | |
| TCCACCACCCTCCAATTCTC+AGG | - | tig0026647:57421-57440 | None:intergenic | 55.0% | |
| GTCGTTGGACACAGCTTGGG+TGG | + | tig0026647:56973-56992 | Msa1430350:CDS | 60.0% | |
| GTCGTTGGACACAGCTTGGG+TGG | + | tig0026647:56973-56992 | Msa1430350:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0026647 | gene | 55288 | 57531 | 55288 | ID=Msa1430350;Name=Msa1430350 |
| tig0026647 | mRNA | 55288 | 57531 | 55288 | ID=Msa1430350-mRNA-1;Parent=Msa1430350;Name=Msa1430350-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0|0|1|0.75|0.6|5|0|381 |
| tig0026647 | exon | 55288 | 55420 | 55288 | ID=Msa1430350-mRNA-1:exon:6956;Parent=Msa1430350-mRNA-1 |
| tig0026647 | exon | 55454 | 55660 | 55454 | ID=Msa1430350-mRNA-1:exon:6957;Parent=Msa1430350-mRNA-1 |
| tig0026647 | exon | 55856 | 56067 | 55856 | ID=Msa1430350-mRNA-1:exon:6958;Parent=Msa1430350-mRNA-1 |
| tig0026647 | exon | 56913 | 57107 | 56913 | ID=Msa1430350-mRNA-1:exon:6959;Parent=Msa1430350-mRNA-1 |
| tig0026647 | exon | 57133 | 57531 | 57133 | ID=Msa1430350-mRNA-1:exon:6960;Parent=Msa1430350-mRNA-1 |
| tig0026647 | CDS | 55288 | 55420 | 55288 | ID=Msa1430350-mRNA-1:cds;Parent=Msa1430350-mRNA-1 |
| tig0026647 | CDS | 55454 | 55660 | 55454 | ID=Msa1430350-mRNA-1:cds;Parent=Msa1430350-mRNA-1 |
| tig0026647 | CDS | 55856 | 56067 | 55856 | ID=Msa1430350-mRNA-1:cds;Parent=Msa1430350-mRNA-1 |
| tig0026647 | CDS | 56913 | 57107 | 56913 | ID=Msa1430350-mRNA-1:cds;Parent=Msa1430350-mRNA-1 |
| tig0026647 | CDS | 57133 | 57531 | 57133 | ID=Msa1430350-mRNA-1:cds;Parent=Msa1430350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
