Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0945370 | XP_003608122.2 | 96.250 | 400 | 15 | 0 | 1 | 400 | 1 | 400 | 0.0 | 801 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0945370 | sp|O49523|DSEL_ARATH | 53.283 | 396 | 177 | 5 | 4 | 392 | 19 | 413 | 2.29e-147 | 427 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0612220 | Msa0945370 | 0.979696 | 1.542047e-148 | -8.615850e-47 |
| Msa0695050 | Msa0945370 | 0.899260 | 2.363904e-77 | -8.615850e-47 |
| Msa0945370 | Msa0964510 | 0.807398 | 5.153063e-50 | -8.615850e-47 |
| Msa0945370 | Msa0998780 | 0.814627 | 1.399462e-51 | -8.615850e-47 |
| Msa0945370 | Msa1319010 | 0.832169 | 1.101803e-55 | -8.615850e-47 |
| Msa0945370 | Msa1430350 | 0.968644 | 5.690679e-129 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0945370 | MtrunA17_Chr4g0046011 | 96.250 | 400 | 15 | 0 | 1 | 400 | 1 | 400 | 0.0 | 801 |
| Msa0945370 | MtrunA17_Chr4g0046001 | 91.457 | 398 | 34 | 0 | 1 | 398 | 10 | 407 | 0.0 | 761 |
| Msa0945370 | MtrunA17_Chr2g0283561 | 61.616 | 396 | 144 | 4 | 3 | 392 | 38 | 431 | 7.53e-177 | 499 |
| Msa0945370 | MtrunA17_Chr4g0039301 | 39.310 | 435 | 220 | 10 | 1 | 400 | 97 | 522 | 2.12e-98 | 303 |
| Msa0945370 | MtrunA17_Chr4g0041311 | 40.441 | 408 | 201 | 7 | 7 | 383 | 31 | 427 | 1.70e-96 | 295 |
| Msa0945370 | MtrunA17_Chr7g0260671 | 38.005 | 421 | 224 | 7 | 4 | 393 | 74 | 488 | 3.86e-94 | 291 |
| Msa0945370 | MtrunA17_Chr7g0260681 | 36.544 | 353 | 193 | 6 | 4 | 331 | 74 | 420 | 9.08e-74 | 236 |
| Msa0945370 | MtrunA17_Chr7g0214711 | 39.249 | 293 | 145 | 8 | 4 | 288 | 105 | 372 | 7.04e-57 | 194 |
| Msa0945370 | MtrunA17_Chr7g0250611 | 34.688 | 369 | 192 | 14 | 3 | 345 | 74 | 419 | 1.47e-54 | 186 |
| Msa0945370 | MtrunA17_Chr5g0399641 | 33.075 | 387 | 195 | 12 | 4 | 350 | 135 | 497 | 6.51e-52 | 182 |
| Msa0945370 | MtrunA17_Chr4g0055691 | 34.109 | 387 | 184 | 13 | 3 | 350 | 128 | 482 | 1.18e-47 | 170 |
| Msa0945370 | MtrunA17_Chr7g0250561 | 31.750 | 400 | 201 | 15 | 4 | 349 | 69 | 450 | 2.50e-47 | 167 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0945370 | AT4G18550.1 | 53.283 | 396 | 177 | 5 | 4 | 392 | 19 | 413 | 2.33e-148 | 427 |
| Msa0945370 | AT4G18550.2 | 53.283 | 396 | 177 | 5 | 4 | 392 | 36 | 430 | 2.38e-148 | 427 |
| Msa0945370 | AT1G06250.1 | 49.100 | 389 | 190 | 4 | 4 | 385 | 5 | 392 | 2.27e-135 | 394 |
| Msa0945370 | AT4G18550.3 | 52.595 | 289 | 130 | 4 | 4 | 290 | 36 | 319 | 6.44e-105 | 313 |
| Msa0945370 | AT1G51440.1 | 41.429 | 420 | 200 | 12 | 3 | 387 | 86 | 494 | 1.11e-93 | 291 |
| Msa0945370 | AT2G30550.2 | 39.573 | 422 | 211 | 12 | 7 | 393 | 104 | 516 | 4.44e-91 | 284 |
| Msa0945370 | AT1G06800.1 | 39.535 | 430 | 215 | 14 | 7 | 400 | 88 | 508 | 3.41e-90 | 281 |
| Msa0945370 | AT1G06250.2 | 49.640 | 278 | 133 | 3 | 115 | 385 | 1 | 278 | 1.02e-89 | 273 |
| Msa0945370 | AT2G42690.1 | 37.226 | 411 | 222 | 7 | 1 | 385 | 1 | 401 | 7.16e-81 | 254 |
| Msa0945370 | AT1G30370.1 | 35.961 | 406 | 220 | 11 | 4 | 383 | 114 | 505 | 7.62e-79 | 253 |
| Msa0945370 | AT2G30550.1 | 39.548 | 354 | 176 | 11 | 7 | 331 | 104 | 448 | 2.45e-74 | 239 |
| Msa0945370 | AT1G06800.2 | 39.888 | 356 | 175 | 13 | 7 | 332 | 88 | 434 | 7.08e-73 | 234 |
| Msa0945370 | AT2G31690.1 | 38.889 | 288 | 160 | 6 | 4 | 288 | 88 | 362 | 7.01e-58 | 196 |
| Msa0945370 | AT1G05800.1 | 35.165 | 364 | 194 | 10 | 4 | 346 | 80 | 422 | 1.59e-57 | 195 |
| Msa0945370 | AT2G44810.2 | 32.199 | 382 | 195 | 11 | 4 | 345 | 86 | 443 | 1.06e-51 | 179 |
| Msa0945370 | AT2G44810.1 | 32.181 | 376 | 191 | 11 | 10 | 345 | 2 | 353 | 3.76e-50 | 173 |
| Msa0945370 | AT4G16820.1 | 34.518 | 394 | 187 | 15 | 8 | 361 | 131 | 493 | 5.19e-49 | 174 |
Find 87 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGAGGGTGGTGGAGAATA+AGG | 0.186405 | 6_3:+24111579 | Msa0945370:CDS |
| TCCAAAGTATATTTGGAAAA+AGG | 0.200965 | 6_3:+24109638 | Msa0945370:CDS |
| TGTAACTGCACATTCGATTT+AGG | 0.218692 | 6_3:-24110124 | None:intergenic |
| TATGCAAGAAGAAGACTATT+TGG | 0.263873 | 6_3:-24111346 | None:intergenic |
| TAATTGTCGTTATTCTAAAA+AGG | 0.269491 | 6_3:+24109607 | Msa0945370:CDS |
| CGTAAGTACTTACTACATTA+TGG | 0.283055 | 6_3:+24109524 | Msa0945370:CDS |
| TAAAGGAGGGTTTAATTTAG+AGG | 0.288625 | 6_3:+24111486 | Msa0945370:CDS |
| TTAACAGCTAAGGAAGCATT+AGG | 0.303858 | 6_3:+24110001 | Msa0945370:intron |
| CCTGTCACATTATTTGCATT+TGG | 0.305993 | 6_3:+24111229 | Msa0945370:CDS |
| TTCAAAGGATGCTTGGAGTA+TGG | 0.306662 | 6_3:+24109748 | Msa0945370:CDS |
| CGCTGCACTATCTCTTGCTT+TGG | 0.312823 | 6_3:-24109705 | None:intergenic |
| AATCATGCGTTCTAAATTGT+AGG | 0.336214 | 6_3:+24111663 | Msa0945370:CDS |
| GTTTATTTGCATGGAATTGC+AGG | 0.337895 | 6_3:+24111451 | Msa0945370:CDS |
| CTTGGAGTATGGAAACAAAT+TGG | 0.350231 | 6_3:+24109759 | Msa0945370:CDS |
| CGTGTTGGAAATTCTAACTT+TGG | 0.360641 | 6_3:+24111259 | Msa0945370:CDS |
| AATATCACATTCCTGAGAAT+TGG | 0.362474 | 6_3:+24111560 | Msa0945370:CDS |
| CTAGCACTAGAATCAGCTAT+TGG | 0.371790 | 6_3:-24110190 | None:intergenic |
| TGCTTGGAGAGGGACAATTC+AGG | 0.376867 | 6_3:+24110042 | Msa0945370:CDS |
| GATCCTGCACCACTTATATT+CGG | 0.398511 | 6_3:+24110100 | Msa0945370:CDS |
| TGATGGTACTTGGAAGCTAA+TGG | 0.402739 | 6_3:+24111618 | Msa0945370:CDS |
| AATAAATTCAACATACCAAA+AGG | 0.412590 | 6_3:+24111187 | Msa0945370:CDS |
| AAGTAAGTGGAAAGGTCTAT+TGG | 0.420412 | 6_3:+24109481 | Msa0945370:CDS |
| ACTTGCAACTATAAGTTCTA+TGG | 0.425826 | 6_3:+24111153 | Msa0945370:CDS |
| GGATGTTGCATACAAATACT+TGG | 0.442993 | 6_3:-24109684 | None:intergenic |
| TTTGCTCAAGCTACATATGA+TGG | 0.446546 | 6_3:+24109551 | Msa0945370:CDS |
| TGATGGTTTCAACTTTGAAA+AGG | 0.449579 | 6_3:+24109568 | Msa0945370:CDS |
| TAACAGCTAAGGAAGCATTA+GGG | 0.450387 | 6_3:+24110002 | Msa0945370:intron |
| TGGAGGGTGGTGGAGAATAA+GGG | 0.455462 | 6_3:+24111580 | Msa0945370:CDS |
| TGATTCTAGTGCTAGAAAAC+AGG | 0.455743 | 6_3:+24110198 | Msa0945370:CDS |
| TTCAACAATCTGATGGTACT+TGG | 0.456136 | 6_3:+24111608 | Msa0945370:CDS |
| AACATGGAGGTTTATTTGCA+TGG | 0.461774 | 6_3:+24111442 | Msa0945370:CDS |
| CTATTAAACAAAAGTAATGA+TGG | 0.464521 | 6_3:+24111526 | Msa0945370:CDS |
| AATCTAAGTACTTGAAGAGT+GGG | 0.469182 | 6_3:+24111407 | Msa0945370:CDS |
| AACTGTCGTTGGACACAGCT+TGG | 0.475044 | 6_3:+24111123 | Msa0945370:CDS |
| TCCACCACCCTCCAATTCTC+AGG | 0.477117 | 6_3:-24111571 | None:intergenic |
| TTGGTCACAGAATACTTGTA+AGG | 0.480981 | 6_3:-24109665 | None:intergenic |
| GGAGGGACATAGTTGTTGCT+TGG | 0.481190 | 6_3:+24110026 | Msa0945370:CDS |
| GCTTGGAGAGGGACAATTCA+GGG | 0.489035 | 6_3:+24110043 | Msa0945370:CDS |
| TGCATATTCAAAGGTGGGAG+AGG | 0.502064 | 6_3:+24111363 | Msa0945370:CDS |
| CTTCTTGCATATTCAAAGGT+GGG | 0.504433 | 6_3:+24111358 | Msa0945370:CDS |
| GAGTATGGAAACAAATTGGA+TGG | 0.512934 | 6_3:+24109763 | Msa0945370:CDS |
| ACTGTCGTTGGACACAGCTT+GGG | 0.515205 | 6_3:+24111124 | Msa0945370:CDS |
| GACAATTCAGGGTGCAGAGT+GGG | 0.520098 | 6_3:+24110054 | Msa0945370:CDS |
| GAAAAGGCATCTAAGTATGC+AGG | 0.523914 | 6_3:+24109584 | Msa0945370:CDS |
| GGACCGAATATAAGTGGTGC+AGG | 0.524592 | 6_3:-24110103 | None:intergenic |
| TCCTGAGAATTGGAGGGTGG+TGG | 0.527608 | 6_3:+24111570 | Msa0945370:CDS |
| CATGGAATTGCAGGAACACA+AGG | 0.532517 | 6_3:+24111460 | Msa0945370:CDS |
| ACATAGTTGTTGCTTGGAGA+GGG | 0.533659 | 6_3:+24110032 | Msa0945370:CDS |
| CTAAGGAAGCATTAGGGAGG+AGG | 0.534094 | 6_3:+24110008 | Msa0945370:CDS |
| AACTTAGTGGCAAAAGTAAG+TGG | 0.534655 | 6_3:+24109468 | Msa0945370:CDS |
| ATCACATTCCTGAGAATTGG+AGG | 0.536099 | 6_3:+24111563 | Msa0945370:CDS |
| GAAATTAGCATAACTGTCGT+TGG | 0.536154 | 6_3:+24111112 | Msa0945370:CDS |
| CCAAATGCAAATAATGTGAC+AGG | 0.536537 | 6_3:-24111229 | None:intergenic |
| TCTTCTTGCATATTCAAAGG+TGG | 0.538213 | 6_3:+24111357 | Msa0945370:CDS |
| GCAGGAACACAAGGAAGTAA+AGG | 0.539942 | 6_3:+24111469 | Msa0945370:CDS |
| GATTTAGGACCGAATATAAG+TGG | 0.540170 | 6_3:-24110109 | None:intergenic |
| TCTTCTTCTTGCATATTCAA+AGG | 0.541516 | 6_3:+24111354 | Msa0945370:CDS |
| AAACGAGATTAGCAGACTTG+TGG | 0.547519 | 6_3:+24111072 | Msa0945370:CDS |
| TGGGGTTAGTGCACATAACA+TGG | 0.566949 | 6_3:+24111426 | Msa0945370:CDS |
| AGTATGGAAACAAATTGGAT+GGG | 0.568664 | 6_3:+24109764 | Msa0945370:CDS |
| GCATTTGGTTCACCTCGTGT+TGG | 0.574021 | 6_3:+24111244 | Msa0945370:CDS |
| AAATCTAAGTACTTGAAGAG+TGG | 0.574558 | 6_3:+24111406 | Msa0945370:CDS |
| GACATAGTTGTTGCTTGGAG+AGG | 0.575425 | 6_3:+24110031 | Msa0945370:CDS |
| GTTGCTGTTGCCACTGATGA+AGG | 0.576148 | 6_3:+24109791 | Msa0945370:CDS |
| TTCAACATTACCTTCATCAG+TGG | 0.579087 | 6_3:-24109801 | None:intergenic |
| ATAAATTCAACATACCAAAA+GGG | 0.580395 | 6_3:+24111188 | Msa0945370:CDS |
| GGTGGTGGAGAATAAGGGTA+TGG | 0.582115 | 6_3:+24111585 | Msa0945370:CDS |
| TAAGGAAGCATTAGGGAGGA+GGG | 0.586465 | 6_3:+24110009 | Msa0945370:CDS |
| TTACGTAGGTCAATGTGTAA+AGG | 0.596130 | 6_3:-24109506 | None:intergenic |
| GGAACACAAGGAAGTAAAGG+AGG | 0.618211 | 6_3:+24111472 | Msa0945370:CDS |
| GGTATGGTTCAACAATCTGA+TGG | 0.619750 | 6_3:+24111601 | Msa0945370:CDS |
| AGTGGCAAAAGTAAGTGGAA+AGG | 0.625837 | 6_3:+24109473 | Msa0945370:CDS |
| GTATGGAAACAAATTGGATG+GGG | 0.630148 | 6_3:+24109765 | Msa0945370:CDS |
| TCGAATGTGCAGTTACACAA+TGG | 0.630838 | 6_3:+24110130 | Msa0945370:CDS |
| TGGGTAGCATAGCAAGAACA+TGG | 0.635845 | 6_3:+24109441 | Msa0945370:CDS |
| GTCGTTGGACACAGCTTGGG+TGG | 0.639883 | 6_3:+24111127 | Msa0945370:CDS |
| AGAACATGGAGAGAACTTAG+TGG | 0.643312 | 6_3:+24109455 | Msa0945370:CDS |
| GAGGAATTAGAAATCGACGC+TGG | 0.655608 | 6_3:+24111382 | Msa0945370:CDS |
| TCACATTCCTGAGAATTGGA+GGG | 0.659641 | 6_3:+24111564 | Msa0945370:CDS |
| ATCTAAGTACTTGAAGAGTG+GGG | 0.675113 | 6_3:+24111408 | Msa0945370:CDS |
| AAGTTAGAATTTCCAACACG+AGG | 0.679774 | 6_3:-24111256 | None:intergenic |
| CATTCCTGAGAATTGGAGGG+TGG | 0.687333 | 6_3:+24111567 | Msa0945370:CDS |
| GAACACAAGGAAGTAAAGGA+GGG | 0.689646 | 6_3:+24111473 | Msa0945370:CDS |
| AATGTAGTAAGTACTTACGT+AGG | 0.694414 | 6_3:-24109520 | None:intergenic |
| CAGCTAAGGAAGCATTAGGG+AGG | 0.703114 | 6_3:+24110005 | Msa0945370:intron |
| GGACAATTCAGGGTGCAGAG+TGG | 0.708525 | 6_3:+24110053 | Msa0945370:CDS |
| GGTTAGTGCACATAACATGG+AGG | 0.759022 | 6_3:+24111429 | Msa0945370:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCAAAATTTTAATATTGATT+TGG | + | chr6_3:24110078-24110097 | Msa0945370:CDS | 10.0% |
| !!! | ATAGAAATCATTTTTTTTAA+AGG | + | chr6_3:24110690-24110709 | Msa0945370:intron | 10.0% |
| !!! | AAAAAAAGTATAACTTTTTT+TGG | + | chr6_3:24110797-24110816 | Msa0945370:intron | 10.0% |
| !!! | TTTAATTTTACTATGTATTT+AGG | - | chr6_3:24110843-24110862 | None:intergenic | 10.0% |
| !!! | TCAAAATTTTAATATTGATT+TGG | + | chr6_3:24110078-24110097 | Msa0945370:CDS | 10.0% |
| !!! | ATAGAAATCATTTTTTTTAA+AGG | + | chr6_3:24110690-24110709 | Msa0945370:intron | 10.0% |
| !!! | AAAAAAAGTATAACTTTTTT+TGG | + | chr6_3:24110797-24110816 | Msa0945370:intron | 10.0% |
| !!! | TTTAATTTTACTATGTATTT+AGG | - | chr6_3:24110843-24110862 | None:intergenic | 10.0% |
| !!! | TAGAAATTCACTTTTTTTTA+AGG | - | chr6_3:24110481-24110500 | None:intergenic | 15.0% |
| !! | AACTTAATAAAGAAAACTTT+AGG | - | chr6_3:24110630-24110649 | None:intergenic | 15.0% |
| !!! | ATATTTATAGTACTTGATTT+TGG | + | chr6_3:24111002-24111021 | Msa0945370:intron | 15.0% |
| !!! | TAGAAATTCACTTTTTTTTA+AGG | - | chr6_3:24110481-24110500 | None:intergenic | 15.0% |
| !! | AACTTAATAAAGAAAACTTT+AGG | - | chr6_3:24110630-24110649 | None:intergenic | 15.0% |
| !!! | ATATTTATAGTACTTGATTT+TGG | + | chr6_3:24111002-24111021 | Msa0945370:intron | 15.0% |
| !!! | TAATTGTCGTTATTCTAAAA+AGG | + | chr6_3:24109607-24109626 | Msa0945370:CDS | 20.0% |
| !!! | TTTCTTTTCCAAAGTATATT+TGG | + | chr6_3:24109631-24109650 | Msa0945370:CDS | 20.0% |
| !!! | CTTAACTTCAATATTTTCAA+AGG | + | chr6_3:24109733-24109752 | Msa0945370:CDS | 20.0% |
| !! | TATTAGTAAAAGTTGTAAGT+TGG | - | chr6_3:24109966-24109985 | None:intergenic | 20.0% |
| !!! | TTAAACAATTTTAACAGCTA+AGG | + | chr6_3:24109991-24110010 | Msa0945370:intron | 20.0% |
| !! | AGCATAACTTAATAATCTTA+AGG | - | chr6_3:24110726-24110745 | None:intergenic | 20.0% |
| !!! | GTTATACTTTTTTTTGAAGA+AGG | - | chr6_3:24110791-24110810 | None:intergenic | 20.0% |
| !!! | TACTATGTATTTAGGTTATA+GGG | - | chr6_3:24110835-24110854 | None:intergenic | 20.0% |
| !!! | TTACTATGTATTTAGGTTAT+AGG | - | chr6_3:24110836-24110855 | None:intergenic | 20.0% |
| !!! | ATTTAGCTTGAGATTTTTTT+TGG | - | chr6_3:24110961-24110980 | None:intergenic | 20.0% |
| !!! | GTTTTTTAACATTTGTAATG+TGG | + | chr6_3:24111033-24111052 | Msa0945370:intron | 20.0% |
| !! | AATAAATTCAACATACCAAA+AGG | + | chr6_3:24111187-24111206 | Msa0945370:CDS | 20.0% |
| !! | ATAAATTCAACATACCAAAA+GGG | + | chr6_3:24111188-24111207 | Msa0945370:CDS | 20.0% |
| !! | CTATTAAACAAAAGTAATGA+TGG | + | chr6_3:24111526-24111545 | Msa0945370:CDS | 20.0% |
| !!! | TAATTGTCGTTATTCTAAAA+AGG | + | chr6_3:24109607-24109626 | Msa0945370:CDS | 20.0% |
| !!! | TTTCTTTTCCAAAGTATATT+TGG | + | chr6_3:24109631-24109650 | Msa0945370:CDS | 20.0% |
| !!! | CTTAACTTCAATATTTTCAA+AGG | + | chr6_3:24109733-24109752 | Msa0945370:CDS | 20.0% |
| !! | TATTAGTAAAAGTTGTAAGT+TGG | - | chr6_3:24109966-24109985 | None:intergenic | 20.0% |
| !!! | TTAAACAATTTTAACAGCTA+AGG | + | chr6_3:24109991-24110010 | Msa0945370:intron | 20.0% |
| !! | AGCATAACTTAATAATCTTA+AGG | - | chr6_3:24110726-24110745 | None:intergenic | 20.0% |
| !!! | GTTATACTTTTTTTTGAAGA+AGG | - | chr6_3:24110791-24110810 | None:intergenic | 20.0% |
| !!! | TACTATGTATTTAGGTTATA+GGG | - | chr6_3:24110835-24110854 | None:intergenic | 20.0% |
| !!! | TTACTATGTATTTAGGTTAT+AGG | - | chr6_3:24110836-24110855 | None:intergenic | 20.0% |
| !!! | ATTTAGCTTGAGATTTTTTT+TGG | - | chr6_3:24110961-24110980 | None:intergenic | 20.0% |
| !!! | GTTTTTTAACATTTGTAATG+TGG | + | chr6_3:24111033-24111052 | Msa0945370:intron | 20.0% |
| !! | AATAAATTCAACATACCAAA+AGG | + | chr6_3:24111187-24111206 | Msa0945370:CDS | 20.0% |
| !! | ATAAATTCAACATACCAAAA+GGG | + | chr6_3:24111188-24111207 | Msa0945370:CDS | 20.0% |
| !! | CTATTAAACAAAAGTAATGA+TGG | + | chr6_3:24111526-24111545 | Msa0945370:CDS | 20.0% |
| ! | TCCAAAGTATATTTGGAAAA+AGG | + | chr6_3:24109638-24109657 | Msa0945370:CDS | 25.0% |
| !! | ACCTTTTTCCAAATATACTT+TGG | - | chr6_3:24109642-24109661 | None:intergenic | 25.0% |
| ! | AAATTGAGCATAATAAGTGT+AGG | + | chr6_3:24109893-24109912 | Msa0945370:intron | 25.0% |
| ! | AATTGAGCATAATAAGTGTA+GGG | + | chr6_3:24109894-24109913 | Msa0945370:intron | 25.0% |
| ! | AGATTTATTGTAGTTTAGCT+AGG | - | chr6_3:24109938-24109957 | None:intergenic | 25.0% |
| ! | CTAATACTATGTAGCATTAT+CGG | - | chr6_3:24110252-24110271 | None:intergenic | 25.0% |
| ! | TTAAACGTTCTAGTATATGT+AGG | + | chr6_3:24110419-24110438 | Msa0945370:intron | 25.0% |
| ! | TAAACGTTCTAGTATATGTA+GGG | + | chr6_3:24110420-24110439 | Msa0945370:intron | 25.0% |
| !!! | TTTTTTTGTTAAGTAGCACA+TGG | - | chr6_3:24110505-24110524 | None:intergenic | 25.0% |
| !! | TACTTGAAGTATTATCTTAG+TGG | - | chr6_3:24110753-24110772 | None:intergenic | 25.0% |
| !! | ACTATGTATTTAGGTTATAG+GGG | - | chr6_3:24110834-24110853 | None:intergenic | 25.0% |
| !! | TTAAACAAATTTGAGACCTA+TGG | + | chr6_3:24110858-24110877 | Msa0945370:intron | 25.0% |
| ! | AGCAGAAAAAGTTTAGTTAA+AGG | - | chr6_3:24110904-24110923 | None:intergenic | 25.0% |
| !!! | TTTAACTAAACTTTTTCTGC+TGG | + | chr6_3:24110903-24110922 | Msa0945370:intron | 25.0% |
| ! | TTGTAATGTGGCATATATAA+AGG | + | chr6_3:24111045-24111064 | Msa0945370:intron | 25.0% |
| ! | TCCAAAGTATATTTGGAAAA+AGG | + | chr6_3:24109638-24109657 | Msa0945370:CDS | 25.0% |
| !! | ACCTTTTTCCAAATATACTT+TGG | - | chr6_3:24109642-24109661 | None:intergenic | 25.0% |
| ! | AAATTGAGCATAATAAGTGT+AGG | + | chr6_3:24109893-24109912 | Msa0945370:intron | 25.0% |
| ! | AATTGAGCATAATAAGTGTA+GGG | + | chr6_3:24109894-24109913 | Msa0945370:intron | 25.0% |
| ! | AGATTTATTGTAGTTTAGCT+AGG | - | chr6_3:24109938-24109957 | None:intergenic | 25.0% |
| ! | CTAATACTATGTAGCATTAT+CGG | - | chr6_3:24110252-24110271 | None:intergenic | 25.0% |
| ! | TTAAACGTTCTAGTATATGT+AGG | + | chr6_3:24110419-24110438 | Msa0945370:intron | 25.0% |
| ! | TAAACGTTCTAGTATATGTA+GGG | + | chr6_3:24110420-24110439 | Msa0945370:intron | 25.0% |
| !!! | TTTTTTTGTTAAGTAGCACA+TGG | - | chr6_3:24110505-24110524 | None:intergenic | 25.0% |
| !! | TACTTGAAGTATTATCTTAG+TGG | - | chr6_3:24110753-24110772 | None:intergenic | 25.0% |
| !! | ACTATGTATTTAGGTTATAG+GGG | - | chr6_3:24110834-24110853 | None:intergenic | 25.0% |
| !! | TTAAACAAATTTGAGACCTA+TGG | + | chr6_3:24110858-24110877 | Msa0945370:intron | 25.0% |
| ! | AGCAGAAAAAGTTTAGTTAA+AGG | - | chr6_3:24110904-24110923 | None:intergenic | 25.0% |
| !!! | TTTAACTAAACTTTTTCTGC+TGG | + | chr6_3:24110903-24110922 | Msa0945370:intron | 25.0% |
| ! | TTGTAATGTGGCATATATAA+AGG | + | chr6_3:24111045-24111064 | Msa0945370:intron | 25.0% |
| AATGTAGTAAGTACTTACGT+AGG | - | chr6_3:24109523-24109542 | None:intergenic | 30.0% | |
| CGTAAGTACTTACTACATTA+TGG | + | chr6_3:24109524-24109543 | Msa0945370:CDS | 30.0% | |
| ! | TGATGGTTTCAACTTTGAAA+AGG | + | chr6_3:24109568-24109587 | Msa0945370:CDS | 30.0% |
| ! | CAATATTTTCAAAGGATGCT+TGG | + | chr6_3:24109741-24109760 | Msa0945370:CDS | 30.0% |
| AGTATGGAAACAAATTGGAT+GGG | + | chr6_3:24109764-24109783 | Msa0945370:CDS | 30.0% | |
| GAAGGTAATGTTGAAAAGTA+TGG | + | chr6_3:24109809-24109828 | Msa0945370:intron | 30.0% | |
| AAACGTTCTAGTATATGTAG+GGG | + | chr6_3:24110421-24110440 | Msa0945370:intron | 30.0% | |
| ACTTGCAACTATAAGTTCTA+TGG | + | chr6_3:24111153-24111172 | Msa0945370:CDS | 30.0% | |
| TATGCAAGAAGAAGACTATT+TGG | - | chr6_3:24111349-24111368 | None:intergenic | 30.0% | |
| TCTTCTTCTTGCATATTCAA+AGG | + | chr6_3:24111354-24111373 | Msa0945370:CDS | 30.0% | |
| AAATCTAAGTACTTGAAGAG+TGG | + | chr6_3:24111406-24111425 | Msa0945370:CDS | 30.0% | |
| AATCTAAGTACTTGAAGAGT+GGG | + | chr6_3:24111407-24111426 | Msa0945370:CDS | 30.0% | |
| ! | TAAAGGAGGGTTTAATTTAG+AGG | + | chr6_3:24111486-24111505 | Msa0945370:CDS | 30.0% |
| AATATCACATTCCTGAGAAT+TGG | + | chr6_3:24111560-24111579 | Msa0945370:CDS | 30.0% | |
| AATGTAGTAAGTACTTACGT+AGG | - | chr6_3:24109523-24109542 | None:intergenic | 30.0% | |
| CGTAAGTACTTACTACATTA+TGG | + | chr6_3:24109524-24109543 | Msa0945370:CDS | 30.0% | |
| ! | TGATGGTTTCAACTTTGAAA+AGG | + | chr6_3:24109568-24109587 | Msa0945370:CDS | 30.0% |
| ! | CAATATTTTCAAAGGATGCT+TGG | + | chr6_3:24109741-24109760 | Msa0945370:CDS | 30.0% |
| AGTATGGAAACAAATTGGAT+GGG | + | chr6_3:24109764-24109783 | Msa0945370:CDS | 30.0% | |
| GAAGGTAATGTTGAAAAGTA+TGG | + | chr6_3:24109809-24109828 | Msa0945370:intron | 30.0% | |
| AAACGTTCTAGTATATGTAG+GGG | + | chr6_3:24110421-24110440 | Msa0945370:intron | 30.0% | |
| ACTTGCAACTATAAGTTCTA+TGG | + | chr6_3:24111153-24111172 | Msa0945370:CDS | 30.0% | |
| TATGCAAGAAGAAGACTATT+TGG | - | chr6_3:24111349-24111368 | None:intergenic | 30.0% | |
| TCTTCTTCTTGCATATTCAA+AGG | + | chr6_3:24111354-24111373 | Msa0945370:CDS | 30.0% | |
| AAATCTAAGTACTTGAAGAG+TGG | + | chr6_3:24111406-24111425 | Msa0945370:CDS | 30.0% | |
| AATCTAAGTACTTGAAGAGT+GGG | + | chr6_3:24111407-24111426 | Msa0945370:CDS | 30.0% | |
| ! | TAAAGGAGGGTTTAATTTAG+AGG | + | chr6_3:24111486-24111505 | Msa0945370:CDS | 30.0% |
| AATATCACATTCCTGAGAAT+TGG | + | chr6_3:24111560-24111579 | Msa0945370:CDS | 30.0% | |
| AACTTAGTGGCAAAAGTAAG+TGG | + | chr6_3:24109468-24109487 | Msa0945370:CDS | 35.0% | |
| AAGTAAGTGGAAAGGTCTAT+TGG | + | chr6_3:24109481-24109500 | Msa0945370:CDS | 35.0% | |
| TTACGTAGGTCAATGTGTAA+AGG | - | chr6_3:24109509-24109528 | None:intergenic | 35.0% | |
| TTTGCTCAAGCTACATATGA+TGG | + | chr6_3:24109551-24109570 | Msa0945370:CDS | 35.0% | |
| TTGGTCACAGAATACTTGTA+AGG | - | chr6_3:24109668-24109687 | None:intergenic | 35.0% | |
| GGATGTTGCATACAAATACT+TGG | - | chr6_3:24109687-24109706 | None:intergenic | 35.0% | |
| CTTGGAGTATGGAAACAAAT+TGG | + | chr6_3:24109759-24109778 | Msa0945370:CDS | 35.0% | |
| GAGTATGGAAACAAATTGGA+TGG | + | chr6_3:24109763-24109782 | Msa0945370:CDS | 35.0% | |
| GTATGGAAACAAATTGGATG+GGG | + | chr6_3:24109765-24109784 | Msa0945370:CDS | 35.0% | |
| TTCAACATTACCTTCATCAG+TGG | - | chr6_3:24109804-24109823 | None:intergenic | 35.0% | |
| !! | TTAACAGCTAAGGAAGCATT+AGG | + | chr6_3:24110001-24110020 | Msa0945370:intron | 35.0% |
| !! | TAACAGCTAAGGAAGCATTA+GGG | + | chr6_3:24110002-24110021 | Msa0945370:intron | 35.0% |
| ! | GATTTAGGACCGAATATAAG+TGG | - | chr6_3:24110112-24110131 | None:intergenic | 35.0% |
| TGTAACTGCACATTCGATTT+AGG | - | chr6_3:24110127-24110146 | None:intergenic | 35.0% | |
| TGATTCTAGTGCTAGAAAAC+AGG | + | chr6_3:24110198-24110217 | Msa0945370:CDS | 35.0% | |
| AACGTTCTAGTATATGTAGG+GGG | + | chr6_3:24110422-24110441 | Msa0945370:intron | 35.0% | |
| GAAATTAGCATAACTGTCGT+TGG | + | chr6_3:24111112-24111131 | Msa0945370:CDS | 35.0% | |
| CCAAATGCAAATAATGTGAC+AGG | - | chr6_3:24111232-24111251 | None:intergenic | 35.0% | |
| CCTGTCACATTATTTGCATT+TGG | + | chr6_3:24111229-24111248 | Msa0945370:CDS | 35.0% | |
| AAGTTAGAATTTCCAACACG+AGG | - | chr6_3:24111259-24111278 | None:intergenic | 35.0% | |
| CGTGTTGGAAATTCTAACTT+TGG | + | chr6_3:24111259-24111278 | Msa0945370:CDS | 35.0% | |
| TCTTCTTGCATATTCAAAGG+TGG | + | chr6_3:24111357-24111376 | Msa0945370:CDS | 35.0% | |
| CTTCTTGCATATTCAAAGGT+GGG | + | chr6_3:24111358-24111377 | Msa0945370:CDS | 35.0% | |
| ATCTAAGTACTTGAAGAGTG+GGG | + | chr6_3:24111408-24111427 | Msa0945370:CDS | 35.0% | |
| AACATGGAGGTTTATTTGCA+TGG | + | chr6_3:24111442-24111461 | Msa0945370:CDS | 35.0% | |
| GTTTATTTGCATGGAATTGC+AGG | + | chr6_3:24111451-24111470 | Msa0945370:CDS | 35.0% | |
| TTCAACAATCTGATGGTACT+TGG | + | chr6_3:24111608-24111627 | Msa0945370:CDS | 35.0% | |
| AACTTAGTGGCAAAAGTAAG+TGG | + | chr6_3:24109468-24109487 | Msa0945370:CDS | 35.0% | |
| AAGTAAGTGGAAAGGTCTAT+TGG | + | chr6_3:24109481-24109500 | Msa0945370:CDS | 35.0% | |
| TTACGTAGGTCAATGTGTAA+AGG | - | chr6_3:24109509-24109528 | None:intergenic | 35.0% | |
| TTTGCTCAAGCTACATATGA+TGG | + | chr6_3:24109551-24109570 | Msa0945370:CDS | 35.0% | |
| TTGGTCACAGAATACTTGTA+AGG | - | chr6_3:24109668-24109687 | None:intergenic | 35.0% | |
| GGATGTTGCATACAAATACT+TGG | - | chr6_3:24109687-24109706 | None:intergenic | 35.0% | |
| CTTGGAGTATGGAAACAAAT+TGG | + | chr6_3:24109759-24109778 | Msa0945370:CDS | 35.0% | |
| GAGTATGGAAACAAATTGGA+TGG | + | chr6_3:24109763-24109782 | Msa0945370:CDS | 35.0% | |
| GTATGGAAACAAATTGGATG+GGG | + | chr6_3:24109765-24109784 | Msa0945370:CDS | 35.0% | |
| TTCAACATTACCTTCATCAG+TGG | - | chr6_3:24109804-24109823 | None:intergenic | 35.0% | |
| !! | TTAACAGCTAAGGAAGCATT+AGG | + | chr6_3:24110001-24110020 | Msa0945370:intron | 35.0% |
| !! | TAACAGCTAAGGAAGCATTA+GGG | + | chr6_3:24110002-24110021 | Msa0945370:intron | 35.0% |
| ! | GATTTAGGACCGAATATAAG+TGG | - | chr6_3:24110112-24110131 | None:intergenic | 35.0% |
| TGTAACTGCACATTCGATTT+AGG | - | chr6_3:24110127-24110146 | None:intergenic | 35.0% | |
| TGATTCTAGTGCTAGAAAAC+AGG | + | chr6_3:24110198-24110217 | Msa0945370:CDS | 35.0% | |
| AACGTTCTAGTATATGTAGG+GGG | + | chr6_3:24110422-24110441 | Msa0945370:intron | 35.0% | |
| GAAATTAGCATAACTGTCGT+TGG | + | chr6_3:24111112-24111131 | Msa0945370:CDS | 35.0% | |
| CCAAATGCAAATAATGTGAC+AGG | - | chr6_3:24111232-24111251 | None:intergenic | 35.0% | |
| CCTGTCACATTATTTGCATT+TGG | + | chr6_3:24111229-24111248 | Msa0945370:CDS | 35.0% | |
| AAGTTAGAATTTCCAACACG+AGG | - | chr6_3:24111259-24111278 | None:intergenic | 35.0% | |
| CGTGTTGGAAATTCTAACTT+TGG | + | chr6_3:24111259-24111278 | Msa0945370:CDS | 35.0% | |
| TCTTCTTGCATATTCAAAGG+TGG | + | chr6_3:24111357-24111376 | Msa0945370:CDS | 35.0% | |
| CTTCTTGCATATTCAAAGGT+GGG | + | chr6_3:24111358-24111377 | Msa0945370:CDS | 35.0% | |
| ATCTAAGTACTTGAAGAGTG+GGG | + | chr6_3:24111408-24111427 | Msa0945370:CDS | 35.0% | |
| AACATGGAGGTTTATTTGCA+TGG | + | chr6_3:24111442-24111461 | Msa0945370:CDS | 35.0% | |
| GTTTATTTGCATGGAATTGC+AGG | + | chr6_3:24111451-24111470 | Msa0945370:CDS | 35.0% | |
| TTCAACAATCTGATGGTACT+TGG | + | chr6_3:24111608-24111627 | Msa0945370:CDS | 35.0% | |
| AGAACATGGAGAGAACTTAG+TGG | + | chr6_3:24109455-24109474 | Msa0945370:CDS | 40.0% | |
| AGTGGCAAAAGTAAGTGGAA+AGG | + | chr6_3:24109473-24109492 | Msa0945370:CDS | 40.0% | |
| !! | GAAAAGGCATCTAAGTATGC+AGG | + | chr6_3:24109584-24109603 | Msa0945370:CDS | 40.0% |
| TTCAAAGGATGCTTGGAGTA+TGG | + | chr6_3:24109748-24109767 | Msa0945370:CDS | 40.0% | |
| ! | ACATAGTTGTTGCTTGGAGA+GGG | + | chr6_3:24110032-24110051 | Msa0945370:CDS | 40.0% |
| GATCCTGCACCACTTATATT+CGG | + | chr6_3:24110100-24110119 | Msa0945370:CDS | 40.0% | |
| TCGAATGTGCAGTTACACAA+TGG | + | chr6_3:24110130-24110149 | Msa0945370:CDS | 40.0% | |
| CTAGCACTAGAATCAGCTAT+TGG | - | chr6_3:24110193-24110212 | None:intergenic | 40.0% | |
| TTCTAGTATATGTAGGGGGT+AGG | + | chr6_3:24110426-24110445 | Msa0945370:intron | 40.0% | |
| TCTAGTATATGTAGGGGGTA+GGG | + | chr6_3:24110427-24110446 | Msa0945370:intron | 40.0% | |
| GTCATTAAGGTAAGTGCCAT+AGG | - | chr6_3:24110877-24110896 | None:intergenic | 40.0% | |
| ATGGCACTTACCTTAATGAC+TGG | + | chr6_3:24110877-24110896 | Msa0945370:intron | 40.0% | |
| TGGCACTTACCTTAATGACT+GGG | + | chr6_3:24110878-24110897 | Msa0945370:intron | 40.0% | |
| AGTTAAAGGCCCAGTCATTA+AGG | - | chr6_3:24110890-24110909 | None:intergenic | 40.0% | |
| AAACGAGATTAGCAGACTTG+TGG | + | chr6_3:24111072-24111091 | Msa0945370:CDS | 40.0% | |
| GAACACAAGGAAGTAAAGGA+GGG | + | chr6_3:24111473-24111492 | Msa0945370:CDS | 40.0% | |
| ATCACATTCCTGAGAATTGG+AGG | + | chr6_3:24111563-24111582 | Msa0945370:CDS | 40.0% | |
| TCACATTCCTGAGAATTGGA+GGG | + | chr6_3:24111564-24111583 | Msa0945370:CDS | 40.0% | |
| GGTATGGTTCAACAATCTGA+TGG | + | chr6_3:24111601-24111620 | Msa0945370:CDS | 40.0% | |
| TGATGGTACTTGGAAGCTAA+TGG | + | chr6_3:24111618-24111637 | Msa0945370:CDS | 40.0% | |
| AGAACATGGAGAGAACTTAG+TGG | + | chr6_3:24109455-24109474 | Msa0945370:CDS | 40.0% | |
| AGTGGCAAAAGTAAGTGGAA+AGG | + | chr6_3:24109473-24109492 | Msa0945370:CDS | 40.0% | |
| !! | GAAAAGGCATCTAAGTATGC+AGG | + | chr6_3:24109584-24109603 | Msa0945370:CDS | 40.0% |
| TTCAAAGGATGCTTGGAGTA+TGG | + | chr6_3:24109748-24109767 | Msa0945370:CDS | 40.0% | |
| ! | ACATAGTTGTTGCTTGGAGA+GGG | + | chr6_3:24110032-24110051 | Msa0945370:CDS | 40.0% |
| GATCCTGCACCACTTATATT+CGG | + | chr6_3:24110100-24110119 | Msa0945370:CDS | 40.0% | |
| TCGAATGTGCAGTTACACAA+TGG | + | chr6_3:24110130-24110149 | Msa0945370:CDS | 40.0% | |
| CTAGCACTAGAATCAGCTAT+TGG | - | chr6_3:24110193-24110212 | None:intergenic | 40.0% | |
| TTCTAGTATATGTAGGGGGT+AGG | + | chr6_3:24110426-24110445 | Msa0945370:intron | 40.0% | |
| TCTAGTATATGTAGGGGGTA+GGG | + | chr6_3:24110427-24110446 | Msa0945370:intron | 40.0% | |
| GTCATTAAGGTAAGTGCCAT+AGG | - | chr6_3:24110877-24110896 | None:intergenic | 40.0% | |
| ATGGCACTTACCTTAATGAC+TGG | + | chr6_3:24110877-24110896 | Msa0945370:intron | 40.0% | |
| TGGCACTTACCTTAATGACT+GGG | + | chr6_3:24110878-24110897 | Msa0945370:intron | 40.0% | |
| AGTTAAAGGCCCAGTCATTA+AGG | - | chr6_3:24110890-24110909 | None:intergenic | 40.0% | |
| AAACGAGATTAGCAGACTTG+TGG | + | chr6_3:24111072-24111091 | Msa0945370:CDS | 40.0% | |
| GAACACAAGGAAGTAAAGGA+GGG | + | chr6_3:24111473-24111492 | Msa0945370:CDS | 40.0% | |
| ATCACATTCCTGAGAATTGG+AGG | + | chr6_3:24111563-24111582 | Msa0945370:CDS | 40.0% | |
| TCACATTCCTGAGAATTGGA+GGG | + | chr6_3:24111564-24111583 | Msa0945370:CDS | 40.0% | |
| GGTATGGTTCAACAATCTGA+TGG | + | chr6_3:24111601-24111620 | Msa0945370:CDS | 40.0% | |
| TGATGGTACTTGGAAGCTAA+TGG | + | chr6_3:24111618-24111637 | Msa0945370:CDS | 40.0% | |
| TGGGTAGCATAGCAAGAACA+TGG | + | chr6_3:24109441-24109460 | Msa0945370:CDS | 45.0% | |
| !! | TAAGGAAGCATTAGGGAGGA+GGG | + | chr6_3:24110009-24110028 | Msa0945370:CDS | 45.0% |
| ! | GACATAGTTGTTGCTTGGAG+AGG | + | chr6_3:24110031-24110050 | Msa0945370:CDS | 45.0% |
| CTAGTATATGTAGGGGGTAG+GGG | + | chr6_3:24110428-24110447 | Msa0945370:intron | 45.0% | |
| !!! | GCTTTTTGAGGTTGCCCTTT+TGG | - | chr6_3:24111205-24111224 | None:intergenic | 45.0% |
| !! | GTGACAGGACATGCTTTTTG+AGG | - | chr6_3:24111217-24111236 | None:intergenic | 45.0% |
| TGCATATTCAAAGGTGGGAG+AGG | + | chr6_3:24111363-24111382 | Msa0945370:CDS | 45.0% | |
| GAGGAATTAGAAATCGACGC+TGG | + | chr6_3:24111382-24111401 | Msa0945370:CDS | 45.0% | |
| ! | TGGGGTTAGTGCACATAACA+TGG | + | chr6_3:24111426-24111445 | Msa0945370:CDS | 45.0% |
| GGTTAGTGCACATAACATGG+AGG | + | chr6_3:24111429-24111448 | Msa0945370:CDS | 45.0% | |
| CATGGAATTGCAGGAACACA+AGG | + | chr6_3:24111460-24111479 | Msa0945370:CDS | 45.0% | |
| GCAGGAACACAAGGAAGTAA+AGG | + | chr6_3:24111469-24111488 | Msa0945370:CDS | 45.0% | |
| GGAACACAAGGAAGTAAAGG+AGG | + | chr6_3:24111472-24111491 | Msa0945370:CDS | 45.0% | |
| TGGGTAGCATAGCAAGAACA+TGG | + | chr6_3:24109441-24109460 | Msa0945370:CDS | 45.0% | |
| !! | TAAGGAAGCATTAGGGAGGA+GGG | + | chr6_3:24110009-24110028 | Msa0945370:CDS | 45.0% |
| ! | GACATAGTTGTTGCTTGGAG+AGG | + | chr6_3:24110031-24110050 | Msa0945370:CDS | 45.0% |
| CTAGTATATGTAGGGGGTAG+GGG | + | chr6_3:24110428-24110447 | Msa0945370:intron | 45.0% | |
| !!! | GCTTTTTGAGGTTGCCCTTT+TGG | - | chr6_3:24111205-24111224 | None:intergenic | 45.0% |
| !! | GTGACAGGACATGCTTTTTG+AGG | - | chr6_3:24111217-24111236 | None:intergenic | 45.0% |
| TGCATATTCAAAGGTGGGAG+AGG | + | chr6_3:24111363-24111382 | Msa0945370:CDS | 45.0% | |
| GAGGAATTAGAAATCGACGC+TGG | + | chr6_3:24111382-24111401 | Msa0945370:CDS | 45.0% | |
| ! | TGGGGTTAGTGCACATAACA+TGG | + | chr6_3:24111426-24111445 | Msa0945370:CDS | 45.0% |
| GGTTAGTGCACATAACATGG+AGG | + | chr6_3:24111429-24111448 | Msa0945370:CDS | 45.0% | |
| CATGGAATTGCAGGAACACA+AGG | + | chr6_3:24111460-24111479 | Msa0945370:CDS | 45.0% | |
| GCAGGAACACAAGGAAGTAA+AGG | + | chr6_3:24111469-24111488 | Msa0945370:CDS | 45.0% | |
| GGAACACAAGGAAGTAAAGG+AGG | + | chr6_3:24111472-24111491 | Msa0945370:CDS | 45.0% | |
| CGCTGCACTATCTCTTGCTT+TGG | - | chr6_3:24109708-24109727 | None:intergenic | 50.0% | |
| ! | GTTGCTGTTGCCACTGATGA+AGG | + | chr6_3:24109791-24109810 | Msa0945370:CDS | 50.0% |
| !! | CAGCTAAGGAAGCATTAGGG+AGG | + | chr6_3:24110005-24110024 | Msa0945370:intron | 50.0% |
| !! | CTAAGGAAGCATTAGGGAGG+AGG | + | chr6_3:24110008-24110027 | Msa0945370:CDS | 50.0% |
| GGAGGGACATAGTTGTTGCT+TGG | + | chr6_3:24110026-24110045 | Msa0945370:CDS | 50.0% | |
| TGCTTGGAGAGGGACAATTC+AGG | + | chr6_3:24110042-24110061 | Msa0945370:CDS | 50.0% | |
| GCTTGGAGAGGGACAATTCA+GGG | + | chr6_3:24110043-24110062 | Msa0945370:CDS | 50.0% | |
| GACAATTCAGGGTGCAGAGT+GGG | + | chr6_3:24110054-24110073 | Msa0945370:CDS | 50.0% | |
| GGACCGAATATAAGTGGTGC+AGG | - | chr6_3:24110106-24110125 | None:intergenic | 50.0% | |
| AACTGTCGTTGGACACAGCT+TGG | + | chr6_3:24111123-24111142 | Msa0945370:CDS | 50.0% | |
| ACTGTCGTTGGACACAGCTT+GGG | + | chr6_3:24111124-24111143 | Msa0945370:CDS | 50.0% | |
| ! | GCATTTGGTTCACCTCGTGT+TGG | + | chr6_3:24111244-24111263 | Msa0945370:CDS | 50.0% |
| CATTCCTGAGAATTGGAGGG+TGG | + | chr6_3:24111567-24111586 | Msa0945370:CDS | 50.0% | |
| !! | TTGGAGGGTGGTGGAGAATA+AGG | + | chr6_3:24111579-24111598 | Msa0945370:CDS | 50.0% |
| !! | TGGAGGGTGGTGGAGAATAA+GGG | + | chr6_3:24111580-24111599 | Msa0945370:CDS | 50.0% |
| !! | GGTGGTGGAGAATAAGGGTA+TGG | + | chr6_3:24111585-24111604 | Msa0945370:CDS | 50.0% |
| CGCTGCACTATCTCTTGCTT+TGG | - | chr6_3:24109708-24109727 | None:intergenic | 50.0% | |
| ! | GTTGCTGTTGCCACTGATGA+AGG | + | chr6_3:24109791-24109810 | Msa0945370:CDS | 50.0% |
| !! | CAGCTAAGGAAGCATTAGGG+AGG | + | chr6_3:24110005-24110024 | Msa0945370:intron | 50.0% |
| !! | CTAAGGAAGCATTAGGGAGG+AGG | + | chr6_3:24110008-24110027 | Msa0945370:CDS | 50.0% |
| GGAGGGACATAGTTGTTGCT+TGG | + | chr6_3:24110026-24110045 | Msa0945370:CDS | 50.0% | |
| TGCTTGGAGAGGGACAATTC+AGG | + | chr6_3:24110042-24110061 | Msa0945370:CDS | 50.0% | |
| GCTTGGAGAGGGACAATTCA+GGG | + | chr6_3:24110043-24110062 | Msa0945370:CDS | 50.0% | |
| GACAATTCAGGGTGCAGAGT+GGG | + | chr6_3:24110054-24110073 | Msa0945370:CDS | 50.0% | |
| GGACCGAATATAAGTGGTGC+AGG | - | chr6_3:24110106-24110125 | None:intergenic | 50.0% | |
| AACTGTCGTTGGACACAGCT+TGG | + | chr6_3:24111123-24111142 | Msa0945370:CDS | 50.0% | |
| ACTGTCGTTGGACACAGCTT+GGG | + | chr6_3:24111124-24111143 | Msa0945370:CDS | 50.0% | |
| ! | GCATTTGGTTCACCTCGTGT+TGG | + | chr6_3:24111244-24111263 | Msa0945370:CDS | 50.0% |
| CATTCCTGAGAATTGGAGGG+TGG | + | chr6_3:24111567-24111586 | Msa0945370:CDS | 50.0% | |
| !! | TTGGAGGGTGGTGGAGAATA+AGG | + | chr6_3:24111579-24111598 | Msa0945370:CDS | 50.0% |
| !! | TGGAGGGTGGTGGAGAATAA+GGG | + | chr6_3:24111580-24111599 | Msa0945370:CDS | 50.0% |
| !! | GGTGGTGGAGAATAAGGGTA+TGG | + | chr6_3:24111585-24111604 | Msa0945370:CDS | 50.0% |
| GGACAATTCAGGGTGCAGAG+TGG | + | chr6_3:24110053-24110072 | Msa0945370:CDS | 55.0% | |
| TCCTGAGAATTGGAGGGTGG+TGG | + | chr6_3:24111570-24111589 | Msa0945370:CDS | 55.0% | |
| TCCACCACCCTCCAATTCTC+AGG | - | chr6_3:24111574-24111593 | None:intergenic | 55.0% | |
| GGACAATTCAGGGTGCAGAG+TGG | + | chr6_3:24110053-24110072 | Msa0945370:CDS | 55.0% | |
| TCCTGAGAATTGGAGGGTGG+TGG | + | chr6_3:24111570-24111589 | Msa0945370:CDS | 55.0% | |
| TCCACCACCCTCCAATTCTC+AGG | - | chr6_3:24111574-24111593 | None:intergenic | 55.0% | |
| GTCGTTGGACACAGCTTGGG+TGG | + | chr6_3:24111127-24111146 | Msa0945370:CDS | 60.0% | |
| GTCGTTGGACACAGCTTGGG+TGG | + | chr6_3:24111127-24111146 | Msa0945370:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 24109440 | 24111684 | 24109440 | ID=Msa0945370;Name=Msa0945370 |
| chr6_3 | mRNA | 24109440 | 24111684 | 24109440 | ID=Msa0945370-mRNA-1;Parent=Msa0945370;Name=Msa0945370-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|0|0|1|1|1|3|0|400 |
| chr6_3 | exon | 24109440 | 24109812 | 24109440 | ID=Msa0945370-mRNA-1:exon:6828;Parent=Msa0945370-mRNA-1 |
| chr6_3 | exon | 24110008 | 24110219 | 24110008 | ID=Msa0945370-mRNA-1:exon:6829;Parent=Msa0945370-mRNA-1 |
| chr6_3 | exon | 24111067 | 24111684 | 24111067 | ID=Msa0945370-mRNA-1:exon:6830;Parent=Msa0945370-mRNA-1 |
| chr6_3 | CDS | 24109440 | 24109812 | 24109440 | ID=Msa0945370-mRNA-1:cds;Parent=Msa0945370-mRNA-1 |
| chr6_3 | CDS | 24110008 | 24110219 | 24110008 | ID=Msa0945370-mRNA-1:cds;Parent=Msa0945370-mRNA-1 |
| chr6_3 | CDS | 24111067 | 24111684 | 24111067 | ID=Msa0945370-mRNA-1:cds;Parent=Msa0945370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
