Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0695910 | XP_013457088.1 | 98.361 | 183 | 3 | 0 | 1 | 183 | 1 | 183 | 1.32e-127 | 366 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0695910 | I3S222 | 98.361 | 183 | 3 | 0 | 1 | 183 | 1 | 183 | 6.33e-128 | 366 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0612760 | Msa0695910 | 0.883179 | 5.584414e-71 | -8.615850e-47 |
| Msa0558240 | Msa0695910 | 0.868986 | 4.340621e-66 | -8.615850e-47 |
| Msa0582040 | Msa0695910 | 0.831043 | 2.087970e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0695910 | MtrunA17_Chr4g0047771 | 98.361 | 183 | 3 | 0 | 1 | 183 | 1 | 183 | 1.22e-131 | 366 |
| Msa0695910 | MtrunA17_Chr2g0318011 | 59.064 | 171 | 69 | 1 | 1 | 170 | 1 | 171 | 2.30e-62 | 191 |
| Msa0695910 | MtrunA17_Chr5g0423771 | 47.904 | 167 | 84 | 2 | 2 | 166 | 6 | 171 | 5.02e-53 | 167 |
| Msa0695910 | MtrunA17_Chr1g0209281 | 43.373 | 166 | 93 | 1 | 3 | 167 | 4 | 169 | 6.81e-42 | 139 |
| Msa0695910 | MtrunA17_Chr1g0209321 | 34.132 | 167 | 102 | 4 | 3 | 167 | 5 | 165 | 2.30e-18 | 78.6 |
| Msa0695910 | MtrunA17_Chr4g0039411 | 27.607 | 163 | 114 | 3 | 9 | 170 | 11 | 170 | 1.22e-12 | 63.5 |
| Msa0695910 | MtrunA17_Chr1g0209311 | 36.842 | 95 | 58 | 2 | 4 | 98 | 6 | 98 | 2.17e-12 | 60.5 |
| Msa0695910 | MtrunA17_Chr1g0209301 | 44.615 | 65 | 36 | 0 | 101 | 165 | 18 | 82 | 9.99e-11 | 56.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0695910 | AT1G61065.1 | 67.760 | 183 | 56 | 2 | 1 | 183 | 1 | 180 | 1.99e-77 | 229 |
| Msa0695910 | AT4G27435.1 | 57.803 | 173 | 72 | 1 | 1 | 172 | 1 | 173 | 4.38e-71 | 213 |
| Msa0695910 | AT1G52910.1 | 52.299 | 174 | 81 | 2 | 1 | 172 | 1 | 174 | 2.13e-63 | 193 |
| Msa0695910 | AT3G15480.1 | 50.289 | 173 | 84 | 2 | 1 | 171 | 1 | 173 | 3.40e-59 | 183 |
| Msa0695910 | AT1G13380.1 | 43.716 | 183 | 96 | 4 | 2 | 183 | 6 | 182 | 7.07e-46 | 149 |
| Msa0695910 | AT1G68220.1 | 38.953 | 172 | 103 | 2 | 6 | 175 | 7 | 178 | 1.36e-37 | 129 |
| Msa0695910 | AT5G17210.1 | 29.379 | 177 | 116 | 5 | 9 | 180 | 11 | 183 | 3.39e-14 | 68.2 |
Find 73 sgRNAs with CRISPR-Local
Find 439 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATGGTCTTTAATTAAATT+TGG | 0.118983 | 4_4:+65612662 | Msa0695910:three_prime_UTR |
| ACTTATTGTGACATGATTTA+AGG | 0.123222 | 4_4:-65612696 | None:intergenic |
| TATGGCTTCTTCTCTGTTAC+TGG | 0.161308 | 4_4:+65608594 | Msa0695910:exon |
| ACTTTCTACCTTCAGTGTTT+TGG | 0.167759 | 4_4:-65611462 | None:intergenic |
| CACAAAGTATAGAGATTTAT+TGG | 0.188851 | 4_4:+65612331 | Msa0695910:CDS |
| GCAGCTTTCATTGTTCTTAC+AGG | 0.247267 | 4_4:+65612407 | Msa0695910:CDS |
| ACCTTGAGGAAAGGAGTATT+TGG | 0.252984 | 4_4:+65612377 | Msa0695910:CDS |
| AAACAAATAAAAGTGGAGTT+TGG | 0.267207 | 4_4:-65605761 | None:intergenic |
| TGAATCGATCCAATAATAAA+AGG | 0.305268 | 4_4:-65605819 | None:intergenic |
| CGTTTGAAGGTGTGCGGGTG+CGG | 0.315070 | 4_4:-65605718 | None:intergenic |
| TTCTTCTCTGTTACTGGTTG+TGG | 0.346559 | 4_4:+65608600 | Msa0695910:CDS |
| CTTATTGTGACATGATTTAA+GGG | 0.353255 | 4_4:-65612695 | None:intergenic |
| TATTAACTTGGCTTATTACA+TGG | 0.364738 | 4_4:+65612571 | Msa0695910:three_prime_UTR |
| AACAAATAAAAGTGGAGTTT+GGG | 0.365836 | 4_4:-65605760 | None:intergenic |
| GTTTGAAGGTGTGCGGGTGC+GGG | 0.381665 | 4_4:-65605717 | None:intergenic |
| TTCCTCAAGGTTTGACATGA+AGG | 0.384581 | 4_4:-65612365 | None:intergenic |
| TTGCCACCGGCCTAGGTGTT+GGG | 0.395204 | 4_4:+65611506 | Msa0695910:CDS |
| TCTGACATTGCCACCGGCCT+AGG | 0.400328 | 4_4:+65611499 | Msa0695910:CDS |
| ACTAATTAAAGTAAGTAAAC+TGG | 0.406768 | 4_4:-65608370 | None:intergenic |
| TAAACAAATTGCCCATGATC+TGG | 0.409000 | 4_4:-65611617 | None:intergenic |
| ACAAAGTATAGAGATTTATT+GGG | 0.411928 | 4_4:+65612332 | Msa0695910:CDS |
| ATTGCCACCGGCCTAGGTGT+TGG | 0.437881 | 4_4:+65611505 | Msa0695910:CDS |
| AATTAAAATTAAAATGCGTA+GGG | 0.441420 | 4_4:+65605927 | Msa0695910:five_prime_UTR |
| TGCAAGTCAAGTGATCATTA+TGG | 0.441738 | 4_4:+65611546 | Msa0695910:CDS |
| TAATGCAATGTATCCCAACT+TGG | 0.460162 | 4_4:+65612533 | Msa0695910:three_prime_UTR |
| GACCTAGTGGATCCAGATCA+TGG | 0.481470 | 4_4:+65611605 | Msa0695910:CDS |
| ATTACACAAACAAATAAAAG+TGG | 0.492052 | 4_4:-65605768 | None:intergenic |
| CTGTTGCTGCTGAGCAGAGA+AGG | 0.494310 | 4_4:+65608656 | Msa0695910:CDS |
| AATACACTTCCTCCCAAGTT+GGG | 0.495844 | 4_4:-65612546 | None:intergenic |
| TTTGTTTAGAGTTTAGACTA+TGG | 0.496787 | 4_4:+65612645 | Msa0695910:three_prime_UTR |
| TAATTAAAATTAAAATGCGT+AGG | 0.506152 | 4_4:+65605926 | Msa0695910:five_prime_UTR |
| GACTTGCAACAAGGATAAAG+AGG | 0.511852 | 4_4:-65611531 | None:intergenic |
| TAATACACTTCCTCCCAAGT+TGG | 0.515990 | 4_4:-65612547 | None:intergenic |
| GCACTGTACACAACGTTTGA+AGG | 0.521741 | 4_4:-65605731 | None:intergenic |
| AGGAAAGGAGTATTTGGAGC+TGG | 0.522435 | 4_4:+65612383 | Msa0695910:CDS |
| GCTGCGTCATGTCTTCTAGC+GGG | 0.522839 | 4_4:+65612287 | Msa0695910:CDS |
| TAACTAGATGCTTGTGCTGT+GGG | 0.523620 | 4_4:+65611572 | Msa0695910:CDS |
| TTTGAAGGTGTGCGGGTGCG+GGG | 0.524716 | 4_4:-65605716 | None:intergenic |
| CTACTTGTAATTATGAAGCT+AGG | 0.525615 | 4_4:+65612611 | Msa0695910:three_prime_UTR |
| TCCAAATACTCCTTTCCTCA+AGG | 0.531125 | 4_4:-65612378 | None:intergenic |
| GAAGTGTATTACTATTAACT+TGG | 0.532411 | 4_4:+65612559 | Msa0695910:three_prime_UTR |
| ATTAAAATTAAAATGCGTAG+GGG | 0.538464 | 4_4:+65605928 | Msa0695910:five_prime_UTR |
| TAAAAGGAAAAGTATTGAAG+TGG | 0.540145 | 4_4:-65605803 | None:intergenic |
| AGATCTTGAGCTGATAGCTA+TGG | 0.543948 | 4_4:+65608576 | Msa0695910:intron |
| TATTACATGGATGTGAATTG+TGG | 0.545400 | 4_4:+65612584 | Msa0695910:three_prime_UTR |
| ATTACATGGATGTGAATTGT+GGG | 0.545568 | 4_4:+65612585 | Msa0695910:three_prime_UTR |
| GAGGGACCCAACACCTAGGC+CGG | 0.547158 | 4_4:-65611512 | None:intergenic |
| TTAAATTTACAGATTACTCA+TGG | 0.550390 | 4_4:-65612513 | None:intergenic |
| GTAACTAGATGCTTGTGCTG+TGG | 0.554303 | 4_4:+65611571 | Msa0695910:CDS |
| TGCTGCGTCATGTCTTCTAG+CGG | 0.556620 | 4_4:+65612286 | Msa0695910:CDS |
| TCTGGATCCACTAGGTCTCA+TGG | 0.558877 | 4_4:-65611599 | None:intergenic |
| ACCTAGTGGATCCAGATCAT+GGG | 0.563046 | 4_4:+65611606 | Msa0695910:CDS |
| AATGCAATGTATCCCAACTT+GGG | 0.564971 | 4_4:+65612534 | Msa0695910:three_prime_UTR |
| CACACCTGTGTCTCTAGCAT+AGG | 0.565825 | 4_4:-65612489 | None:intergenic |
| ACACCTGTGTCTCTAGCATA+GGG | 0.569459 | 4_4:-65612488 | None:intergenic |
| ATAAATCTCTATACTTTGTG+TGG | 0.577844 | 4_4:-65612328 | None:intergenic |
| TTTGTTTATTCATCACTACC+TGG | 0.599794 | 4_4:+65611632 | Msa0695910:CDS |
| CACAACGTTTGAAGGTGTGC+GGG | 0.602926 | 4_4:-65605723 | None:intergenic |
| TATGATTCTGACATTGCCAC+CGG | 0.606011 | 4_4:+65611493 | Msa0695910:CDS |
| TCATGTCAAACCTTGAGGAA+AGG | 0.610389 | 4_4:+65612368 | Msa0695910:CDS |
| CACCTTCATGTCAAACCTTG+AGG | 0.611145 | 4_4:+65612363 | Msa0695910:CDS |
| CCTCCCTATGCTAGAGACAC+AGG | 0.615801 | 4_4:+65612485 | Msa0695910:CDS |
| GGGAGAGCCATGAGACCTAG+TGG | 0.628075 | 4_4:+65611592 | Msa0695910:CDS |
| GGACCCAACACCTAGGCCGG+TGG | 0.639370 | 4_4:-65611509 | None:intergenic |
| ACTTGCAACAAGGATAAAGA+GGG | 0.642274 | 4_4:-65611530 | None:intergenic |
| CTGTGTCTCTAGCATAGGGA+GGG | 0.646357 | 4_4:-65612484 | None:intergenic |
| AATTTAGCCCAAAACACTGA+AGG | 0.648878 | 4_4:+65611454 | Msa0695910:CDS |
| GCAATGTATCCCAACTTGGG+AGG | 0.649916 | 4_4:+65612537 | Msa0695910:three_prime_UTR |
| TAAAGAGGGACCCAACACCT+AGG | 0.661021 | 4_4:-65611516 | None:intergenic |
| GCCCATGATCTGGATCCACT+AGG | 0.663327 | 4_4:-65611607 | None:intergenic |
| TGATCACTTGACTTGCAACA+AGG | 0.664373 | 4_4:-65611540 | None:intergenic |
| CCTGTGTCTCTAGCATAGGG+AGG | 0.667869 | 4_4:-65612485 | None:intergenic |
| ACACAACGTTTGAAGGTGTG+CGG | 0.689751 | 4_4:-65605724 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATAATTAGATTTTATAGT+GGG | - | chr4_4:65606044-65606063 | None:intergenic | 10.0% |
| !! | TATAAAATCTAATTATTTGT+GGG | + | chr4_4:65606046-65606065 | Msa0695910:intron | 10.0% |
| !!! | GGTTTTAAAAAATTATAATA+TGG | - | chr4_4:65606084-65606103 | None:intergenic | 10.0% |
| !!! | TTTGATTTAATTTAATTTTG+TGG | + | chr4_4:65608551-65608570 | Msa0695910:intron | 10.0% |
| !!! | AACTTTAAATAGATTTTTAA+CGG | - | chr4_4:65608718-65608737 | None:intergenic | 10.0% |
| !!! | ACATTTGATTTTAAATATAA+GGG | - | chr4_4:65610211-65610230 | None:intergenic | 10.0% |
| !! | AAAAAAAACATAAAATTTCT+AGG | + | chr4_4:65610659-65610678 | Msa0695910:intron | 10.0% |
| !!! | AATACAATATTTTATACTAT+TGG | - | chr4_4:65610701-65610720 | None:intergenic | 10.0% |
| !! | TAAAAAAAAAACATAATTAC+GGG | - | chr4_4:65612029-65612048 | None:intergenic | 10.0% |
| !!! | TTAAACAATAAAATATTTTG+AGG | + | chr4_4:65612151-65612170 | Msa0695910:intron | 10.0% |
| !!! | AATACTTTTCCTTTTATTAT+TGG | + | chr4_4:65605810-65605829 | Msa0695910:five_prime_UTR | 15.0% |
| !! | TAATTAAAATTAAAATGCGT+AGG | + | chr4_4:65605926-65605945 | Msa0695910:five_prime_UTR | 15.0% |
| !! | AATTAAAATTAAAATGCGTA+GGG | + | chr4_4:65605927-65605946 | Msa0695910:five_prime_UTR | 15.0% |
| !!! | CAAATAATTAGATTTTATAG+TGG | - | chr4_4:65606045-65606064 | None:intergenic | 15.0% |
| !! | CTATAAAATCTAATTATTTG+TGG | + | chr4_4:65606045-65606064 | Msa0695910:intron | 15.0% |
| !!! | GTTGTTTTTTAAAATGAAAT+CGG | - | chr4_4:65606232-65606251 | None:intergenic | 15.0% |
| !!! | GTTGTTTTTTAAAATGAAAT+CGG | - | chr4_4:65606232-65606251 | None:intergenic | 15.0% |
| !! | AAAACCATTAAACATAATTA+TGG | - | chr4_4:65607087-65607106 | None:intergenic | 15.0% |
| !! | ATGAAATTATTATTGTTAGA+TGG | + | chr4_4:65607152-65607171 | Msa0695910:intron | 15.0% |
| !! | AAAACCATTAAACATAATTA+TGG | - | chr4_4:65607087-65607106 | None:intergenic | 15.0% |
| !!! | AAAACTTTTAAAAATTTGGA+CGG | - | chr4_4:65607708-65607727 | None:intergenic | 15.0% |
| !! | AATTAAAACACTAAAAAACT+TGG | + | chr4_4:65608333-65608352 | Msa0695910:five_prime_UTR | 15.0% |
| !!! | TTTTTGTTTAGTAGTATAAA+AGG | + | chr4_4:65608761-65608780 | Msa0695910:intron | 15.0% |
| !!! | TAGAGAATTAAAATTGATTT+TGG | - | chr4_4:65609246-65609265 | None:intergenic | 15.0% |
| !!! | GACATTTGATTTTAAATATA+AGG | - | chr4_4:65610212-65610231 | None:intergenic | 15.0% |
| !!! | ATTGATTTCATAAGTTATTA+TGG | + | chr4_4:65610999-65611018 | Msa0695910:intron | 15.0% |
| !!! | AATGTTTCTAATGTTAAAAT+TGG | + | chr4_4:65611383-65611402 | Msa0695910:intron | 15.0% |
| !!! | TTATTTGTTTTTCTAATAAC+AGG | + | chr4_4:65611429-65611448 | Msa0695910:intron | 15.0% |
| !!! | ATTTTTAGCAATAATTAGTT+TGG | + | chr4_4:65611677-65611696 | Msa0695910:intron | 15.0% |
| !! | AAAAGATATAACATAATTAC+GGG | - | chr4_4:65612061-65612080 | None:intergenic | 15.0% |
| !! | GAAAAGATATAACATAATTA+CGG | - | chr4_4:65612062-65612081 | None:intergenic | 15.0% |
| !! | ATTACACAAACAAATAAAAG+TGG | - | chr4_4:65605771-65605790 | None:intergenic | 20.0% |
| !! | ATTAAAATTAAAATGCGTAG+GGG | + | chr4_4:65605928-65605947 | Msa0695910:five_prime_UTR | 20.0% |
| !!! | TTATAATATGGAGCTTTATT+AGG | - | chr4_4:65606072-65606091 | None:intergenic | 20.0% |
| !!! | GTTGTTTTCTATAATGAAAT+CGG | - | chr4_4:65606669-65606688 | None:intergenic | 20.0% |
| !! | GAAACCATAATTATGTTTAA+TGG | + | chr4_4:65607080-65607099 | Msa0695910:intron | 20.0% |
| !! | GAAACCATAATTATGTTTAA+TGG | + | chr4_4:65607080-65607099 | Msa0695910:intron | 20.0% |
| !! | AAACCAAAATAATTGTCTAA+TGG | + | chr4_4:65607260-65607279 | Msa0695910:intron | 20.0% |
| !!! | AAACCATTAGACAATTATTT+TGG | - | chr4_4:65607266-65607285 | None:intergenic | 20.0% |
| !!! | TGATTGATGTTTTTTGATTA+GGG | - | chr4_4:65607648-65607667 | None:intergenic | 20.0% |
| !!! | TTGATTGATGTTTTTTGATT+AGG | - | chr4_4:65607649-65607668 | None:intergenic | 20.0% |
| !!! | TTTTGTTTTATTCTTTCAGT+TGG | - | chr4_4:65607836-65607855 | None:intergenic | 20.0% |
| !! | ACTAATTAAAGTAAGTAAAC+TGG | - | chr4_4:65608373-65608392 | None:intergenic | 20.0% |
| !!! | TGTCTTGTTTTGTTTTTATT+TGG | + | chr4_4:65608437-65608456 | Msa0695910:intron | 20.0% |
| !! | CAAGTTAGAATTAATAATAG+AGG | + | chr4_4:65609186-65609205 | Msa0695910:intron | 20.0% |
| !! | TTCAAAAAAAATCTCTTTAG+AGG | - | chr4_4:65609999-65610018 | None:intergenic | 20.0% |
| !!! | TCTAAAGAGATTTTTTTTGA+AGG | + | chr4_4:65609998-65610017 | Msa0695910:intron | 20.0% |
| !!! | TGTTTCCATTTATTTTATTG+AGG | - | chr4_4:65610079-65610098 | None:intergenic | 20.0% |
| !! | TATACACACTTATCATAAAA+GGG | + | chr4_4:65610931-65610950 | Msa0695910:intron | 20.0% |
| !! | ATTTAAAAAATTGAAAGCAG+AGG | + | chr4_4:65611077-65611096 | Msa0695910:intron | 20.0% |
| !! | AATCTGAACATTCATATTTA+AGG | + | chr4_4:65611858-65611877 | Msa0695910:intron | 20.0% |
| !! | TCATATTTAAGGACAAATAT+TGG | + | chr4_4:65611869-65611888 | Msa0695910:intron | 20.0% |
| !! | GAAAGAAGTCATATAAAAAA+GGG | - | chr4_4:65611968-65611987 | None:intergenic | 20.0% |
| !! | TGAAAGAAGTCATATAAAAA+AGG | - | chr4_4:65611969-65611988 | None:intergenic | 20.0% |
| !! | ACAAAGTATAGAGATTTATT+GGG | + | chr4_4:65612332-65612351 | Msa0695910:CDS | 20.0% |
| !!! | AGTTTTTCAAAAGCTAATAA+TGG | + | chr4_4:65612455-65612474 | Msa0695910:CDS | 20.0% |
| !! | TTAAATTTACAGATTACTCA+TGG | - | chr4_4:65612516-65612535 | None:intergenic | 20.0% |
| !! | CTATGGTCTTTAATTAAATT+TGG | + | chr4_4:65612662-65612681 | Msa0695910:three_prime_UTR | 20.0% |
| ! | AACAAATAAAAGTGGAGTTT+GGG | - | chr4_4:65605763-65605782 | None:intergenic | 25.0% |
| ! | AAACAAATAAAAGTGGAGTT+TGG | - | chr4_4:65605764-65605783 | None:intergenic | 25.0% |
| !!! | TAAAAGGAAAAGTATTGAAG+TGG | - | chr4_4:65605806-65605825 | None:intergenic | 25.0% |
| ! | TGAATCGATCCAATAATAAA+AGG | - | chr4_4:65605822-65605841 | None:intergenic | 25.0% |
| ! | TTAAAATTAAAATGCGTAGG+GGG | + | chr4_4:65605929-65605948 | Msa0695910:intron | 25.0% |
| ! | AAATAAGCTGTTTGAATAAG+CGG | - | chr4_4:65606142-65606161 | None:intergenic | 25.0% |
| ! | AAACCAAGATAATTGTGTAA+TGG | + | chr4_4:65607123-65607142 | Msa0695910:intron | 25.0% |
| ! | AAACCATTACACAATTATCT+TGG | - | chr4_4:65607129-65607148 | None:intergenic | 25.0% |
| !! | ATTTCATTGCAAAATGGTTT+TGG | - | chr4_4:65607362-65607381 | None:intergenic | 25.0% |
| !! | AAAACCATTTTGCAATGAAA+TGG | + | chr4_4:65607361-65607380 | Msa0695910:intron | 25.0% |
| !! | TTAAGTACATCTAATGGTTT+TGG | - | chr4_4:65607442-65607461 | None:intergenic | 25.0% |
| ! | AAACCATTAGATGTACTTAA+TGG | + | chr4_4:65607442-65607461 | Msa0695910:intron | 25.0% |
| ! | AAACCATTAAGTACATCTAA+TGG | - | chr4_4:65607448-65607467 | None:intergenic | 25.0% |
| ! | TAATGAGGAGAATATGATTA+GGG | - | chr4_4:65607570-65607589 | None:intergenic | 25.0% |
| ! | TTAATGAGGAGAATATGATT+AGG | - | chr4_4:65607571-65607590 | None:intergenic | 25.0% |
| ! | TTTATTAGAATAGAACAACC+TGG | - | chr4_4:65608489-65608508 | None:intergenic | 25.0% |
| !!! | CTTGTTGTATTTCTGAAATT+AGG | + | chr4_4:65608850-65608869 | Msa0695910:intron | 25.0% |
| ! | AGTCACTTGAACAATAAATT+AGG | + | chr4_4:65609116-65609135 | Msa0695910:intron | 25.0% |
| ! | GTCACTTGAACAATAAATTA+GGG | + | chr4_4:65609117-65609136 | Msa0695910:intron | 25.0% |
| !! | TGTAAAAATCACACGTTTTA+GGG | + | chr4_4:65609140-65609159 | Msa0695910:intron | 25.0% |
| !!! | AAAATTGATTTTGGCATGTT+TGG | - | chr4_4:65609237-65609256 | None:intergenic | 25.0% |
| !! | AACAACTCTTTTCAATTAAG+TGG | - | chr4_4:65609298-65609317 | None:intergenic | 25.0% |
| !! | CAGAAAGAAGATTAGTTAAT+GGG | - | chr4_4:65609330-65609349 | None:intergenic | 25.0% |
| ! | AACAGAATCTATTCTCATAT+TGG | - | chr4_4:65609727-65609746 | None:intergenic | 25.0% |
| ! | GTTGTAATTAACAAGCAAAT+AGG | + | chr4_4:65609753-65609772 | Msa0695910:intron | 25.0% |
| ! | GACACAATAATGACATAATA+CGG | + | chr4_4:65609778-65609797 | Msa0695910:intron | 25.0% |
| !! | AAATCCTCTAAAGAGATATT+TGG | + | chr4_4:65610022-65610041 | Msa0695910:intron | 25.0% |
| !! | TTTTATTGAGGAGCTAATTA+AGG | - | chr4_4:65610067-65610086 | None:intergenic | 25.0% |
| ! | TAGCTCCTCAATAAAATAAA+TGG | + | chr4_4:65610071-65610090 | Msa0695910:intron | 25.0% |
| ! | AAATAAATGGAAACAGCTTA+TGG | + | chr4_4:65610084-65610103 | Msa0695910:intron | 25.0% |
| ! | TTATTCAATGAGCTTATCAT+AGG | - | chr4_4:65610119-65610138 | None:intergenic | 25.0% |
| ! | TATAAGGGTGAAAAAATGTA+GGG | - | chr4_4:65610196-65610215 | None:intergenic | 25.0% |
| ! | ATATAAGGGTGAAAAAATGT+AGG | - | chr4_4:65610197-65610216 | None:intergenic | 25.0% |
| ! | CATCAAAAACTTAGTCATAA+AGG | + | chr4_4:65610237-65610256 | Msa0695910:intron | 25.0% |
| ! | GAGTTTGTAAATTCAATAAC+AGG | - | chr4_4:65610271-65610290 | None:intergenic | 25.0% |
| ! | TTACAAGTTCTTTCACAAAA+TGG | - | chr4_4:65610334-65610353 | None:intergenic | 25.0% |
| !! | ATTTTGTGAAAGAACTTGTA+AGG | + | chr4_4:65610333-65610352 | Msa0695910:intron | 25.0% |
| !! | GTTTAGTTCAATGAGTTTAA+TGG | - | chr4_4:65610440-65610459 | None:intergenic | 25.0% |
| ! | GTGTTTGAATCATTTATACT+TGG | - | chr4_4:65610493-65610512 | None:intergenic | 25.0% |
| !! | AAACATAAAATTTCTAGGTG+AGG | + | chr4_4:65610664-65610683 | Msa0695910:intron | 25.0% |
| ! | GTATACACACTTATCATAAA+AGG | + | chr4_4:65610930-65610949 | Msa0695910:intron | 25.0% |
| ! | AGGCAAAGTAATAATTATTG+TGG | - | chr4_4:65611243-65611262 | None:intergenic | 25.0% |
| ! | ATTATTACTTTGCCTATAGT+TGG | + | chr4_4:65611248-65611267 | Msa0695910:intron | 25.0% |
| ! | TTATTACTTTGCCTATAGTT+GGG | + | chr4_4:65611249-65611268 | Msa0695910:intron | 25.0% |
| ! | AATATGAATGTTCAGATTGT+CGG | - | chr4_4:65611856-65611875 | None:intergenic | 25.0% |
| ! | AAACATAATTACGGGTATAT+TGG | - | chr4_4:65612021-65612040 | None:intergenic | 25.0% |
| ! | GTAACATGTGATAAATTCTA+TGG | + | chr4_4:65612084-65612103 | Msa0695910:intron | 25.0% |
| ! | ACAAGAGAAAACATCAAATT+TGG | - | chr4_4:65612204-65612223 | None:intergenic | 25.0% |
| ! | ATAAATCTCTATACTTTGTG+TGG | - | chr4_4:65612331-65612350 | None:intergenic | 25.0% |
| ! | CACAAAGTATAGAGATTTAT+TGG | + | chr4_4:65612331-65612350 | Msa0695910:CDS | 25.0% |
| !! | TTTTCAAAAGCTAATAATGG+TGG | + | chr4_4:65612458-65612477 | Msa0695910:CDS | 25.0% |
| ! | GAAGTGTATTACTATTAACT+TGG | + | chr4_4:65612559-65612578 | Msa0695910:three_prime_UTR | 25.0% |
| !! | TATTAACTTGGCTTATTACA+TGG | + | chr4_4:65612571-65612590 | Msa0695910:three_prime_UTR | 25.0% |
| !! | TTTGTTTAGAGTTTAGACTA+TGG | + | chr4_4:65612645-65612664 | Msa0695910:three_prime_UTR | 25.0% |
| ! | CTTATTGTGACATGATTTAA+GGG | - | chr4_4:65612698-65612717 | None:intergenic | 25.0% |
| ! | ACTTATTGTGACATGATTTA+AGG | - | chr4_4:65612699-65612718 | None:intergenic | 25.0% |
| !! | GATTCACGTACTTTTAGAAA+TGG | + | chr4_4:65605836-65605855 | Msa0695910:five_prime_UTR | 30.0% |
| TAAAATTAAAATGCGTAGGG+GGG | + | chr4_4:65605930-65605949 | Msa0695910:intron | 30.0% | |
| GTGTAGAAAGCAATTATGTT+AGG | - | chr4_4:65606011-65606030 | None:intergenic | 30.0% | |
| !!! | ATTTTATAGTGGGCTTACTT+GGG | - | chr4_4:65606034-65606053 | None:intergenic | 30.0% |
| TCCTAATAAGTTGTAGAAAG+CGG | - | chr4_4:65606105-65606124 | None:intergenic | 30.0% | |
| !! | ATTGTCTAATGGTTTTGCTA+TGG | + | chr4_4:65607271-65607290 | Msa0695910:intron | 30.0% |
| GAAACCATTTCATTGCAAAA+TGG | - | chr4_4:65607368-65607387 | None:intergenic | 30.0% | |
| !!! | TTGATGTTTTTTGATTAGGG+AGG | - | chr4_4:65607645-65607664 | None:intergenic | 30.0% |
| AGATAGAAAAAGAAGGAAGA+AGG | - | chr4_4:65607755-65607774 | None:intergenic | 30.0% | |
| AAATCAGAACCATTAGATCA+AGG | - | chr4_4:65608242-65608261 | None:intergenic | 30.0% | |
| GGCAAAAGTTATTATGCATA+AGG | - | chr4_4:65608290-65608309 | None:intergenic | 30.0% | |
| TGAAACGAAACAGAAAAGTA+CGG | - | chr4_4:65608416-65608435 | None:intergenic | 30.0% | |
| ! | GTACTTGCTTGAAATTTGTT+TGG | + | chr4_4:65608462-65608481 | Msa0695910:intron | 30.0% |
| !!! | CTTTCTAGTTTTCCTTTACT+TGG | + | chr4_4:65608807-65608826 | Msa0695910:intron | 30.0% |
| CAACTTTCTTAACCAAGTAA+AGG | - | chr4_4:65608822-65608841 | None:intergenic | 30.0% | |
| !! | TTGGTTAAGAAAGTTGATGA+AGG | + | chr4_4:65608826-65608845 | Msa0695910:intron | 30.0% |
| !! | TGGTTAAGAAAGTTGATGAA+GGG | + | chr4_4:65608827-65608846 | Msa0695910:intron | 30.0% |
| !! | TGTATTTCTGAAATTAGGAG+AGG | + | chr4_4:65608855-65608874 | Msa0695910:intron | 30.0% |
| ! | ACACTTGCAAAATTTTCGAT+CGG | - | chr4_4:65609008-65609027 | None:intergenic | 30.0% |
| ! | AAATTTTGCAAGTGTGTGTT+TGG | + | chr4_4:65609013-65609032 | Msa0695910:intron | 30.0% |
| TAACTGATTGTGATTAGAAG+TGG | + | chr4_4:65609064-65609083 | Msa0695910:intron | 30.0% | |
| ! | GTGTAAAAATCACACGTTTT+AGG | + | chr4_4:65609139-65609158 | Msa0695910:intron | 30.0% |
| ! | TCAATTAAGTGGTTCACTTT+TGG | - | chr4_4:65609287-65609306 | None:intergenic | 30.0% |
| ! | CCAGAAAGAAGATTAGTTAA+TGG | - | chr4_4:65609331-65609350 | None:intergenic | 30.0% |
| CCATTAACTAATCTTCTTTC+TGG | + | chr4_4:65609328-65609347 | Msa0695910:intron | 30.0% | |
| TATCACCAAAACTTATAGAC+TGG | + | chr4_4:65609352-65609371 | Msa0695910:intron | 30.0% | |
| ATCACCAAAACTTATAGACT+GGG | + | chr4_4:65609353-65609372 | Msa0695910:intron | 30.0% | |
| CAATCATTCCAAAGCATAAA+AGG | - | chr4_4:65609384-65609403 | None:intergenic | 30.0% | |
| !!! | CTTTTATGCTTTGGAATGAT+TGG | + | chr4_4:65609382-65609401 | Msa0695910:intron | 30.0% |
| TAATGCTGTAAACTGAATTC+TGG | + | chr4_4:65609452-65609471 | Msa0695910:intron | 30.0% | |
| TCTGAGTAGACTTAAAAAAC+AGG | - | chr4_4:65609495-65609514 | None:intergenic | 30.0% | |
| GTTTAGAAATGTAGAAAAGC+TGG | + | chr4_4:65609583-65609602 | Msa0695910:intron | 30.0% | |
| AATGTAGAAAAGCTGGATAT+AGG | + | chr4_4:65609590-65609609 | Msa0695910:intron | 30.0% | |
| ! | AAGTACAAAATTTTGTCGTG+TGG | + | chr4_4:65609691-65609710 | Msa0695910:intron | 30.0% |
| GTAATTAACAAGCAAATAGG+TGG | + | chr4_4:65609756-65609775 | Msa0695910:intron | 30.0% | |
| ! | AGATAGATGGTTGATATTCA+TGG | + | chr4_4:65609810-65609829 | Msa0695910:intron | 30.0% |
| ! | CTCTAAAGAGATATTTGGAA+GGG | + | chr4_4:65610027-65610046 | Msa0695910:intron | 30.0% |
| ! | ATATTTGGAAGGGTTTGTTT+AGG | + | chr4_4:65610037-65610056 | Msa0695910:intron | 30.0% |
| ATAAGGGTGAAAAAATGTAG+GGG | - | chr4_4:65610195-65610214 | None:intergenic | 30.0% | |
| !!! | TGGTTTTGTAAGAGATTAAG+AGG | + | chr4_4:65610303-65610322 | Msa0695910:intron | 30.0% |
| ACATTAATAGCACTAGATGT+TGG | - | chr4_4:65610373-65610392 | None:intergenic | 30.0% | |
| CATTGAACTAAACTGAACTT+AGG | + | chr4_4:65610447-65610466 | Msa0695910:intron | 30.0% | |
| AAACACAACTTTATATCTCC+CGG | + | chr4_4:65610507-65610526 | Msa0695910:intron | 30.0% | |
| ! | TTTTTCCTTCTCAAAAAACC+TGG | - | chr4_4:65610643-65610662 | None:intergenic | 30.0% |
| CAGTTAATTAAGCTGCTTAT+CGG | - | chr4_4:65610904-65610923 | None:intergenic | 30.0% | |
| TGTGTACACAAGTCAATATT+AGG | - | chr4_4:65611218-65611237 | None:intergenic | 30.0% | |
| AATGAAGAGACTGAGTTATA+GGG | - | chr4_4:65611284-65611303 | None:intergenic | 30.0% | |
| AAATGAAGAGACTGAGTTAT+AGG | - | chr4_4:65611285-65611304 | None:intergenic | 30.0% | |
| TTTGTTTATTCATCACTACC+TGG | + | chr4_4:65611632-65611651 | Msa0695910:CDS | 30.0% | |
| ! | ATGTTTGTTGACAATGAGTT+TGG | + | chr4_4:65611737-65611756 | Msa0695910:intron | 30.0% |
| ! | TTTAGAGCTTCATAGAATCA+CGG | - | chr4_4:65611779-65611798 | None:intergenic | 30.0% |
| ! | GTATAGCTTTTCCAGAATAA+CGG | + | chr4_4:65611799-65611818 | Msa0695910:intron | 30.0% |
| GGACAAGAAAAAGTTTCAAA+AGG | - | chr4_4:65611947-65611966 | None:intergenic | 30.0% | |
| ! | TTATCCTCATGAGAGAATTT+TGG | - | chr4_4:65612126-65612145 | None:intergenic | 30.0% |
| TATTACATGGATGTGAATTG+TGG | + | chr4_4:65612584-65612603 | Msa0695910:three_prime_UTR | 30.0% | |
| ATTACATGGATGTGAATTGT+GGG | + | chr4_4:65612585-65612604 | Msa0695910:three_prime_UTR | 30.0% | |
| CTACTTGTAATTATGAAGCT+AGG | + | chr4_4:65612611-65612630 | Msa0695910:three_prime_UTR | 30.0% | |
| AAAATTAAAATGCGTAGGGG+GGG | + | chr4_4:65605931-65605950 | Msa0695910:intron | 35.0% | |
| GTGTAGAAAGCAATTATGCA+CGG | - | chr4_4:65605989-65606008 | None:intergenic | 35.0% | |
| !!! | TTTTATAGTGGGCTTACTTG+GGG | - | chr4_4:65606033-65606052 | None:intergenic | 35.0% |
| !!! | GATTTTATAGTGGGCTTACT+TGG | - | chr4_4:65606035-65606054 | None:intergenic | 35.0% |
| ACCGCTTTCTACAACTTATT+AGG | + | chr4_4:65606101-65606120 | Msa0695910:intron | 35.0% | |
| GTTAGAGAGAGAAATGAGTA+TGG | + | chr4_4:65607009-65607028 | Msa0695910:intron | 35.0% | |
| TGGACTATGAGTTTCTTTAC+TGG | + | chr4_4:65607029-65607048 | Msa0695910:intron | 35.0% | |
| !! | TAATGGTTTTGCTATGGCTA+TGG | + | chr4_4:65607277-65607296 | Msa0695910:intron | 35.0% |
| ! | GTTTCAAAACCATTTTGCTG+TGG | + | chr4_4:65607313-65607332 | Msa0695910:intron | 35.0% |
| !! | AAACCATTTTGCTGTGGAAA+TGG | + | chr4_4:65607319-65607338 | Msa0695910:intron | 35.0% |
| AAACCATTTCCACAGCAAAA+TGG | - | chr4_4:65607325-65607344 | None:intergenic | 35.0% | |
| ! | TTTCGACAGCAAAATGGTTT+TGG | - | chr4_4:65607399-65607418 | None:intergenic | 35.0% |
| !! | AAACCATTTTGCTGTCGAAA+TGG | + | chr4_4:65607399-65607418 | Msa0695910:intron | 35.0% |
| AAACCATTTCGACAGCAAAA+TGG | - | chr4_4:65607405-65607424 | None:intergenic | 35.0% | |
| ! | AGGGAAAGTGATTTTCGAAA+TGG | - | chr4_4:65607551-65607570 | None:intergenic | 35.0% |
| ! | TTTGGAATTGTTGAAGTGTG+AGG | - | chr4_4:65607600-65607619 | None:intergenic | 35.0% |
| GAAGGTGAGATAGAAAAAGA+AGG | - | chr4_4:65607762-65607781 | None:intergenic | 35.0% | |
| AAGGATGAGAGTTATGAAGA+AGG | - | chr4_4:65607780-65607799 | None:intergenic | 35.0% | |
| TTCATCAACCGTTACAATTC+TGG | + | chr4_4:65607894-65607913 | Msa0695910:intron | 35.0% | |
| ! | GAAGTGTTCCAGAATTGTAA+CGG | - | chr4_4:65607905-65607924 | None:intergenic | 35.0% |
| AGGAAGATCCATGAAAATCA+AGG | + | chr4_4:65608155-65608174 | Msa0695910:intron | 35.0% | |
| ! | CATCAGATCCTTGATTTTCA+TGG | - | chr4_4:65608166-65608185 | None:intergenic | 35.0% |
| CATGAAAATCAAGGATCTGA+TGG | + | chr4_4:65608164-65608183 | Msa0695910:intron | 35.0% | |
| AAAATCAAGGATCTGATGGA+AGG | + | chr4_4:65608168-65608187 | Msa0695910:intron | 35.0% | |
| CATAAGGATTTCCTTATGCA+TGG | - | chr4_4:65608274-65608293 | None:intergenic | 35.0% | |
| ! | ATAATAACTTTTGCCGCGTA+GGG | + | chr4_4:65608295-65608314 | Msa0695910:intron | 35.0% |
| ! | AAACGAAACAGAAAAGTACG+GGG | - | chr4_4:65608414-65608433 | None:intergenic | 35.0% |
| ! | GAAACGAAACAGAAAAGTAC+GGG | - | chr4_4:65608415-65608434 | None:intergenic | 35.0% |
| !! | ACTTGCTATCAAAACAGTTG+AGG | - | chr4_4:65608966-65608985 | None:intergenic | 35.0% |
| ! | ACTTGCAAAATTTTCGATCG+GGG | - | chr4_4:65609006-65609025 | None:intergenic | 35.0% |
| ! | CACTTGCAAAATTTTCGATC+GGG | - | chr4_4:65609007-65609026 | None:intergenic | 35.0% |
| AGAGGCAACATGAATTCTAA+TGG | + | chr4_4:65609204-65609223 | Msa0695910:intron | 35.0% | |
| !! | ATTGATTTTGGCATGTTTGG+AGG | - | chr4_4:65609234-65609253 | None:intergenic | 35.0% |
| GATAAATACTCCTACTTGCT+TGG | + | chr4_4:65609414-65609433 | Msa0695910:intron | 35.0% | |
| GTCTACTCAGACATCATAAT+AGG | + | chr4_4:65609504-65609523 | Msa0695910:intron | 35.0% | |
| TACTCAGACATCATAATAGG+TGG | + | chr4_4:65609507-65609526 | Msa0695910:intron | 35.0% | |
| ACTCAGACATCATAATAGGT+GGG | + | chr4_4:65609508-65609527 | Msa0695910:intron | 35.0% | |
| ATAATAGGTGGGGTAATTGT+AGG | + | chr4_4:65609519-65609538 | Msa0695910:intron | 35.0% | |
| ! | GCAGTTGAAGGAGAAATTTT+TGG | + | chr4_4:65609612-65609631 | Msa0695910:intron | 35.0% |
| !!! | GAAATTTTTGGCTTTACCAC+TGG | + | chr4_4:65609624-65609643 | Msa0695910:intron | 35.0% |
| ACACTAATTACTACTCTCCA+TGG | - | chr4_4:65609925-65609944 | None:intergenic | 35.0% | |
| CCTTCCAAATATCTCTTTAG+AGG | - | chr4_4:65610029-65610048 | None:intergenic | 35.0% | |
| ! | CCTCTAAAGAGATATTTGGA+AGG | + | chr4_4:65610026-65610045 | Msa0695910:intron | 35.0% |
| AGGTAAAAAACACATTTCGG+CGG | - | chr4_4:65610171-65610190 | None:intergenic | 35.0% | |
| GGGAGGTAAAAAACACATTT+CGG | - | chr4_4:65610174-65610193 | None:intergenic | 35.0% | |
| TAAGGGTGAAAAAATGTAGG+GGG | - | chr4_4:65610194-65610213 | None:intergenic | 35.0% | |
| ACAAACTCTTACAGCTTAAG+TGG | + | chr4_4:65610283-65610302 | Msa0695910:intron | 35.0% | |
| !! | ATGGACTAGCCAACAAAAAT+TGG | - | chr4_4:65610535-65610554 | None:intergenic | 35.0% |
| !! | AACTTTGCCATGGCTTTAAT+TGG | + | chr4_4:65610559-65610578 | Msa0695910:intron | 35.0% |
| !! | ACTTTGCCATGGCTTTAATT+GGG | + | chr4_4:65610560-65610579 | Msa0695910:intron | 35.0% |
| ! | CTTGCAAATCAAAGTGTTTG+GGG | - | chr4_4:65610750-65610769 | None:intergenic | 35.0% |
| ! | CCTTGCAAATCAAAGTGTTT+GGG | - | chr4_4:65610751-65610770 | None:intergenic | 35.0% |
| ! | ACCTTGCAAATCAAAGTGTT+TGG | - | chr4_4:65610752-65610771 | None:intergenic | 35.0% |
| CATACTAATGTTTCTTGAGC+AGG | - | chr4_4:65610787-65610806 | None:intergenic | 35.0% | |
| CTGCTCAAGAAACATTAGTA+TGG | + | chr4_4:65610785-65610804 | Msa0695910:intron | 35.0% | |
| TTGATTAGGAAGGGAGTTTA+CGG | - | chr4_4:65610828-65610847 | None:intergenic | 35.0% | |
| ! | CAACTGTCATTGATTAGGAA+GGG | - | chr4_4:65610837-65610856 | None:intergenic | 35.0% |
| ! | TCAACTGTCATTGATTAGGA+AGG | - | chr4_4:65610838-65610857 | None:intergenic | 35.0% |
| ! | CAGTTCAACTGTCATTGATT+AGG | - | chr4_4:65610842-65610861 | None:intergenic | 35.0% |
| CTAATCAATGACAGTTGAAC+TGG | + | chr4_4:65610840-65610859 | Msa0695910:intron | 35.0% | |
| TTAAGCTGCTTATCGGAATA+GGG | - | chr4_4:65610897-65610916 | None:intergenic | 35.0% | |
| ATTAAGCTGCTTATCGGAAT+AGG | - | chr4_4:65610898-65610917 | None:intergenic | 35.0% | |
| !! | AGTTATTATGGAGAGTGTTC+TGG | + | chr4_4:65611011-65611030 | Msa0695910:intron | 35.0% |
| AAGGACATTACCATCATATG+AGG | + | chr4_4:65611119-65611138 | Msa0695910:intron | 35.0% | |
| AGGACATTACCATCATATGA+GGG | + | chr4_4:65611120-65611139 | Msa0695910:intron | 35.0% | |
| TTAGCTATTCCCTCATATGA+TGG | - | chr4_4:65611132-65611151 | None:intergenic | 35.0% | |
| CATATGAGGGAATAGCTAAT+TGG | + | chr4_4:65611133-65611152 | Msa0695910:intron | 35.0% | |
| GCAATGCATTCAGTAATTTC+AGG | + | chr4_4:65611179-65611198 | Msa0695910:intron | 35.0% | |
| !! | TTCAGTGTTTTGGGCTAAAT+TGG | - | chr4_4:65611455-65611474 | None:intergenic | 35.0% |
| AATTTAGCCCAAAACACTGA+AGG | + | chr4_4:65611454-65611473 | Msa0695910:CDS | 35.0% | |
| ! | CTTTCTACCTTCAGTGTTTT+GGG | - | chr4_4:65611464-65611483 | None:intergenic | 35.0% |
| ! | ACTTTCTACCTTCAGTGTTT+TGG | - | chr4_4:65611465-65611484 | None:intergenic | 35.0% |
| ACTTGCAACAAGGATAAAGA+GGG | - | chr4_4:65611533-65611552 | None:intergenic | 35.0% | |
| TGCAAGTCAAGTGATCATTA+TGG | + | chr4_4:65611546-65611565 | Msa0695910:CDS | 35.0% | |
| TAAACAAATTGCCCATGATC+TGG | - | chr4_4:65611620-65611639 | None:intergenic | 35.0% | |
| AAAGTTGTGCAATACATACC+AGG | - | chr4_4:65611653-65611672 | None:intergenic | 35.0% | |
| TGAGTTTGGCAAAATCAAAG+TGG | + | chr4_4:65611751-65611770 | Msa0695910:intron | 35.0% | |
| TAAGCCAAAATTCTCTCATG+AGG | + | chr4_4:65612119-65612138 | Msa0695910:intron | 35.0% | |
| !! | GTTTGTGATGTTGATGATTC+AGG | + | chr4_4:65612249-65612268 | Msa0695910:intron | 35.0% |
| TAATGCAATGTATCCCAACT+TGG | + | chr4_4:65612533-65612552 | Msa0695910:three_prime_UTR | 35.0% | |
| AATGCAATGTATCCCAACTT+GGG | + | chr4_4:65612534-65612553 | Msa0695910:three_prime_UTR | 35.0% | |
| TTGCAATGAAATGGTTTCCG+TGG | + | chr4_4:65607370-65607389 | Msa0695910:intron | 40.0% | |
| !!! | CAAAATGGTTTTGGAGACCA+CGG | - | chr4_4:65607390-65607409 | None:intergenic | 40.0% |
| ! | AATGGACTTTGTGTTTGCGA+TGG | - | chr4_4:65607533-65607552 | None:intergenic | 40.0% |
| GAATTGTTGAAGTGTGAGGT+TGG | - | chr4_4:65607596-65607615 | None:intergenic | 40.0% | |
| ! | AGTGAAGGATGTTGAGGTTT+TGG | - | chr4_4:65607618-65607637 | None:intergenic | 40.0% |
| AGCAAGGAACATAGAGAGTA+AGG | - | chr4_4:65607799-65607818 | None:intergenic | 40.0% | |
| ! | GGAAGAAAGTACAGAAAGCA+AGG | - | chr4_4:65607815-65607834 | None:intergenic | 40.0% |
| !! | TACAATTCTGGAACACTTCG+CGG | + | chr4_4:65607906-65607925 | Msa0695910:intron | 40.0% |
| ! | AGTTTGGAACGAAGCATGTT+CGG | + | chr4_4:65608073-65608092 | Msa0695910:intron | 40.0% |
| !! | TGGAGTGGTTGAAAAGTGTT+CGG | + | chr4_4:65608132-65608151 | Msa0695910:intron | 40.0% |
| ! | CAAGGACAGGTGTTATAATC+TGG | - | chr4_4:65608224-65608243 | None:intergenic | 40.0% |
| AACACCTGTCCTTGATCTAA+TGG | + | chr4_4:65608230-65608249 | Msa0695910:intron | 40.0% | |
| AGAACCATTAGATCAAGGAC+AGG | - | chr4_4:65608237-65608256 | None:intergenic | 40.0% | |
| TTGCTTATGCACCATGCATA+AGG | + | chr4_4:65608260-65608279 | Msa0695910:intron | 40.0% | |
| ! | CATAATAACTTTTGCCGCGT+AGG | + | chr4_4:65608294-65608313 | Msa0695910:intron | 40.0% |
| ! | TAATAACTTTTGCCGCGTAG+GGG | + | chr4_4:65608296-65608315 | Msa0695910:intron | 40.0% |
| ! | GCTTGAAATTTGTTTGGACC+AGG | + | chr4_4:65608468-65608487 | Msa0695910:intron | 40.0% |
| AGATCTTGAGCTGATAGCTA+TGG | + | chr4_4:65608576-65608595 | Msa0695910:intron | 40.0% | |
| TATGGCTTCTTCTCTGTTAC+TGG | + | chr4_4:65608594-65608613 | Msa0695910:exon | 40.0% | |
| ! | TTCTTCTCTGTTACTGGTTG+TGG | + | chr4_4:65608600-65608619 | Msa0695910:CDS | 40.0% |
| GAGGACTTGAAGCAACAATA+AGG | - | chr4_4:65608947-65608966 | None:intergenic | 40.0% | |
| !! | CAAGTGTGTGTTTGGTTCTA+AGG | + | chr4_4:65609021-65609040 | Msa0695910:intron | 40.0% |
| !!! | ATCACACGTTTTAGGGCAAA+AGG | + | chr4_4:65609147-65609166 | Msa0695910:intron | 40.0% |
| !! | TGGTTCACTTTTGGAAGAGT+CGG | - | chr4_4:65609278-65609297 | None:intergenic | 40.0% |
| ! | GCATCCCAGTCTATAAGTTT+TGG | - | chr4_4:65609360-65609379 | None:intergenic | 40.0% |
| CTCAGACATCATAATAGGTG+GGG | + | chr4_4:65609509-65609528 | Msa0695910:intron | 40.0% | |
| ACGGTTAAATCGCAGATAGA+TGG | + | chr4_4:65609797-65609816 | Msa0695910:intron | 40.0% | |
| AACTAAGTGCAGATGTCAAC+CGG | + | chr4_4:65609857-65609876 | Msa0695910:intron | 40.0% | |
| AAGGTTCAGATGATTCACAC+CGG | + | chr4_4:65609881-65609900 | Msa0695910:intron | 40.0% | |
| GTGTGCCAAAAAACAGAAAC+TGG | + | chr4_4:65609943-65609962 | Msa0695910:intron | 40.0% | |
| !!! | CCAGACCAGTTTCTGTTTTT+TGG | - | chr4_4:65609951-65609970 | None:intergenic | 40.0% |
| CCAAAAAACAGAAACTGGTC+TGG | + | chr4_4:65609948-65609967 | Msa0695910:intron | 40.0% | |
| TAAAAAACACATTTCGGCGG+GGG | - | chr4_4:65610168-65610187 | None:intergenic | 40.0% | |
| GTAAAAAACACATTTCGGCG+GGG | - | chr4_4:65610169-65610188 | None:intergenic | 40.0% | |
| GGTAAAAAACACATTTCGGC+GGG | - | chr4_4:65610170-65610189 | None:intergenic | 40.0% | |
| ! | GAAAGAACTTGTAAGGCACT+AGG | + | chr4_4:65610340-65610359 | Msa0695910:intron | 40.0% |
| TAGCCAACAAAAATTGGCAC+CGG | - | chr4_4:65610529-65610548 | None:intergenic | 40.0% | |
| TCCAAAACCGATTAATCTGG+GGG | - | chr4_4:65610613-65610632 | None:intergenic | 40.0% | |
| GTCCAAAACCGATTAATCTG+GGG | - | chr4_4:65610614-65610633 | None:intergenic | 40.0% | |
| GGTCCAAAACCGATTAATCT+GGG | - | chr4_4:65610615-65610634 | None:intergenic | 40.0% | |
| !!! | CAGATTAATCGGTTTTGGAC+CGG | + | chr4_4:65610614-65610633 | Msa0695910:intron | 40.0% |
| !!! | AGATTAATCGGTTTTGGACC+GGG | + | chr4_4:65610615-65610634 | Msa0695910:intron | 40.0% |
| TTCTCAAAAAACCTGGTACC+CGG | - | chr4_4:65610636-65610655 | None:intergenic | 40.0% | |
| !! | CCCAAACACTTTGATTTGCA+AGG | + | chr4_4:65610748-65610767 | Msa0695910:intron | 40.0% |
| AATGTTTCTTGAGCAGGTGA+CGG | - | chr4_4:65610781-65610800 | None:intergenic | 40.0% | |
| AGGAGGGACATTGAAGATAT+AGG | - | chr4_4:65610866-65610885 | None:intergenic | 40.0% | |
| GAATAGGGACTTAATCAGGA+GGG | - | chr4_4:65610882-65610901 | None:intergenic | 40.0% | |
| ATCGGAATAGGGACTTAATC+AGG | - | chr4_4:65610886-65610905 | None:intergenic | 40.0% | |
| ! | TGTTCTGGTCTAGAACACAA+AGG | + | chr4_4:65611026-65611045 | Msa0695910:intron | 40.0% |
| AGAACACAAAGGTCTGTGAT+TGG | + | chr4_4:65611037-65611056 | Msa0695910:intron | 40.0% | |
| GAACACAAAGGTCTGTGATT+GGG | + | chr4_4:65611038-65611057 | Msa0695910:intron | 40.0% | |
| TCTGTGATTGTTGTCTGACA+AGG | + | chr4_4:65611100-65611119 | Msa0695910:intron | 40.0% | |
| TTACTTTGCCTATAGTTGGG+TGG | + | chr4_4:65611252-65611271 | Msa0695910:intron | 40.0% | |
| ! | CAATACAGCATTTTCCTGCA+TGG | + | chr4_4:65611330-65611349 | Msa0695910:intron | 40.0% |
| TATGATTCTGACATTGCCAC+CGG | + | chr4_4:65611493-65611512 | Msa0695910:CDS | 40.0% | |
| GACTTGCAACAAGGATAAAG+AGG | - | chr4_4:65611534-65611553 | None:intergenic | 40.0% | |
| !! | TGATCACTTGACTTGCAACA+AGG | - | chr4_4:65611543-65611562 | None:intergenic | 40.0% |
| TAACTAGATGCTTGTGCTGT+GGG | + | chr4_4:65611572-65611591 | Msa0695910:CDS | 40.0% | |
| GAGGAACAAAACAAGCAGAA+AGG | + | chr4_4:65612170-65612189 | Msa0695910:intron | 40.0% | |
| CATCACAAACATCACACATC+AGG | - | chr4_4:65612239-65612258 | None:intergenic | 40.0% | |
| TTCCTCAAGGTTTGACATGA+AGG | - | chr4_4:65612368-65612387 | None:intergenic | 40.0% | |
| TCATGTCAAACCTTGAGGAA+AGG | + | chr4_4:65612368-65612387 | Msa0695910:CDS | 40.0% | |
| !! | ACCTTGAGGAAAGGAGTATT+TGG | + | chr4_4:65612377-65612396 | Msa0695910:CDS | 40.0% |
| TCCAAATACTCCTTTCCTCA+AGG | - | chr4_4:65612381-65612400 | None:intergenic | 40.0% | |
| GCAGCTTTCATTGTTCTTAC+AGG | + | chr4_4:65612407-65612426 | Msa0695910:CDS | 40.0% | |
| AATACACTTCCTCCCAAGTT+GGG | - | chr4_4:65612549-65612568 | None:intergenic | 40.0% | |
| TAATACACTTCCTCCCAAGT+TGG | - | chr4_4:65612550-65612569 | None:intergenic | 40.0% | |
| ! | ACACAACGTTTGAAGGTGTG+CGG | - | chr4_4:65605727-65605746 | None:intergenic | 45.0% |
| GCACTGTACACAACGTTTGA+AGG | - | chr4_4:65605734-65605753 | None:intergenic | 45.0% | |
| GGTGTGGTTATGGTGCATAA+GGG | + | chr4_4:65605952-65605971 | Msa0695910:intron | 45.0% | |
| GCAATTATGCACGGTGCATA+AGG | - | chr4_4:65605980-65605999 | None:intergenic | 45.0% | |
| !! | GTGTGAGGTTGGTCTTAATG+AGG | - | chr4_4:65607585-65607604 | None:intergenic | 45.0% |
| !!! | AAGCGGCGGAAGTATTTTCA+CGG | - | chr4_4:65607941-65607960 | None:intergenic | 45.0% |
| GAACAAAACACGGTCGTAAG+CGG | - | chr4_4:65607958-65607977 | None:intergenic | 45.0% | |
| !! | ACCGTGTTTTGTTCTCCGAT+CGG | + | chr4_4:65607964-65607983 | Msa0695910:intron | 45.0% |
| TCCGATCGGAGAACAAAACA+CGG | - | chr4_4:65607968-65607987 | None:intergenic | 45.0% | |
| TTTATCGCAGCATCTCCGAT+CGG | - | chr4_4:65607982-65608001 | None:intergenic | 45.0% | |
| TTTCGTGTCACGTGTTTGCA+CGG | - | chr4_4:65608029-65608048 | None:intergenic | 45.0% | |
| !! | AGTGGTTGAAAAGTGTTCGG+AGG | + | chr4_4:65608135-65608154 | Msa0695910:intron | 45.0% |
| AAGGATCTGATGGAAGGAGT+TGG | + | chr4_4:65608174-65608193 | Msa0695910:intron | 45.0% | |
| ATGGAAGGAGTTGGATCTGA+TGG | + | chr4_4:65608183-65608202 | Msa0695910:intron | 45.0% | |
| AAGGAGTTGGATCTGATGGA+AGG | + | chr4_4:65608187-65608206 | Msa0695910:intron | 45.0% | |
| TTGGATCTGATGGAAGGAGT+TGG | + | chr4_4:65608193-65608212 | Msa0695910:intron | 45.0% | |
| !! | GTGTGTGTTTGGTTCTAAGG+TGG | + | chr4_4:65609024-65609043 | Msa0695910:intron | 45.0% |
| ! | GGGATGCACCTTTTATGCTT+TGG | + | chr4_4:65609373-65609392 | Msa0695910:intron | 45.0% |
| TAAGCACACACCAAGCAAGT+AGG | - | chr4_4:65609427-65609446 | None:intergenic | 45.0% | |
| AGCTGGATATAGGCAGTTGA+AGG | + | chr4_4:65609600-65609619 | Msa0695910:intron | 45.0% | |
| GTGAATCATCTGAACCTTGC+CGG | - | chr4_4:65609879-65609898 | None:intergenic | 45.0% | |
| GCTACATGTACAAGAGCAAC+CGG | - | chr4_4:65609903-65609922 | None:intergenic | 45.0% | |
| TGCTCTTGTACATGTAGCCA+TGG | + | chr4_4:65609905-65609924 | Msa0695910:intron | 45.0% | |
| AGCCAACAAAAATTGGCACC+GGG | - | chr4_4:65610528-65610547 | None:intergenic | 45.0% | |
| ! | GATTAGCCCCCCAGATTAAT+CGG | + | chr4_4:65610603-65610622 | Msa0695910:intron | 45.0% |
| CCAAAACCGATTAATCTGGG+GGG | - | chr4_4:65610612-65610631 | None:intergenic | 45.0% | |
| CGGTCCAAAACCGATTAATC+TGG | - | chr4_4:65610616-65610635 | None:intergenic | 45.0% | |
| !!! | GGGTACCAGGTTTTTTGAGA+AGG | + | chr4_4:65610635-65610654 | Msa0695910:intron | 45.0% |
| TGGGGATTGCAACAACAAAC+TGG | - | chr4_4:65610732-65610751 | None:intergenic | 45.0% | |
| GGAATAGGGACTTAATCAGG+AGG | - | chr4_4:65610883-65610902 | None:intergenic | 45.0% | |
| TTTGCCTATAGTTGGGTGGA+TGG | + | chr4_4:65611256-65611275 | Msa0695910:intron | 45.0% | |
| TTGCCTATAGTTGGGTGGAT+GGG | + | chr4_4:65611257-65611276 | Msa0695910:intron | 45.0% | |
| ! | ACAGCATTTTCCTGCATGGT+AGG | + | chr4_4:65611334-65611353 | Msa0695910:intron | 45.0% |
| ! | ATTTTCCTGCATGGTAGGCA+CGG | + | chr4_4:65611339-65611358 | Msa0695910:intron | 45.0% |
| GTAACTAGATGCTTGTGCTG+TGG | + | chr4_4:65611571-65611590 | Msa0695910:CDS | 45.0% | |
| ! | ACCTAGTGGATCCAGATCAT+GGG | + | chr4_4:65611606-65611625 | Msa0695910:CDS | 45.0% |
| GATCCTATATCAAAGCGCAG+AGG | - | chr4_4:65611925-65611944 | None:intergenic | 45.0% | |
| CACCTTCATGTCAAACCTTG+AGG | + | chr4_4:65612363-65612382 | Msa0695910:CDS | 45.0% | |
| !! | AGGAAAGGAGTATTTGGAGC+TGG | + | chr4_4:65612383-65612402 | Msa0695910:CDS | 45.0% |
| ACACCTGTGTCTCTAGCATA+GGG | - | chr4_4:65612491-65612510 | None:intergenic | 45.0% | |
| !!! | TAAAAAAACTTTTAAAAATT+TGG | - | chr4_4:65607712-65607731 | None:intergenic | 5.0% |
| !!! | ATTTTTAAAAGTTTTTTTAT+CGG | + | chr4_4:65607713-65607732 | Msa0695910:intron | 5.0% |
| !! | TTAAAAAAAAAACATAATTA+CGG | - | chr4_4:65612030-65612049 | None:intergenic | 5.0% |
| ! | CACAACGTTTGAAGGTGTGC+GGG | - | chr4_4:65605726-65605745 | None:intergenic | 50.0% |
| GGGTGTGGTTATGGTGCATA+AGG | + | chr4_4:65605951-65605970 | Msa0695910:intron | 50.0% | |
| TTCACAGCAAGAAACCTCGC+CGG | + | chr4_4:65607487-65607506 | Msa0695910:intron | 50.0% | |
| TTCGTCTCCTCTGTCTTCTC+CGG | - | chr4_4:65607509-65607528 | None:intergenic | 50.0% | |
| GGTGAGAGTGAAGGATGTTG+AGG | - | chr4_4:65607624-65607643 | None:intergenic | 50.0% | |
| GATTAGGGAGGTGAGAGTGA+AGG | - | chr4_4:65607633-65607652 | None:intergenic | 50.0% | |
| GTGCAAACACGTGACACGAA+AGG | + | chr4_4:65608028-65608047 | Msa0695910:intron | 50.0% | |
| CGTGACACGAAAGGCTAAGA+CGG | + | chr4_4:65608037-65608056 | Msa0695910:intron | 50.0% | |
| TTGGAACGAAGCATGTTCGG+CGG | + | chr4_4:65608076-65608095 | Msa0695910:intron | 50.0% | |
| GGGTGAAAAAATGTAGGGGG+AGG | - | chr4_4:65610191-65610210 | None:intergenic | 50.0% | |
| !! | CTCCCGGTGCCAATTTTTGT+TGG | + | chr4_4:65610523-65610542 | Msa0695910:intron | 50.0% |
| GTCCATGCAGAACTTTGCCA+TGG | + | chr4_4:65610549-65610568 | Msa0695910:intron | 50.0% | |
| AGCCATGGCAAAGTTCTGCA+TGG | - | chr4_4:65610554-65610573 | None:intergenic | 50.0% | |
| !! | CCCCCCAGATTAATCGGTTT+TGG | + | chr4_4:65610609-65610628 | Msa0695910:intron | 50.0% |
| ! | GCAACAACAAACTGGTGACG+AGG | - | chr4_4:65610724-65610743 | None:intergenic | 50.0% |
| TAAAGAGGGACCCAACACCT+AGG | - | chr4_4:65611519-65611538 | None:intergenic | 50.0% | |
| TCTGGATCCACTAGGTCTCA+TGG | - | chr4_4:65611602-65611621 | None:intergenic | 50.0% | |
| ! | GACCTAGTGGATCCAGATCA+TGG | + | chr4_4:65611605-65611624 | Msa0695910:CDS | 50.0% |
| ACGACGAGTAGCCGTTATTC+TGG | - | chr4_4:65611813-65611832 | None:intergenic | 50.0% | |
| TATCAAAGCGCAGAGGTGGT+AGG | - | chr4_4:65611918-65611937 | None:intergenic | 50.0% | |
| CCTATATCAAAGCGCAGAGG+TGG | - | chr4_4:65611922-65611941 | None:intergenic | 50.0% | |
| CCACCTCTGCGCTTTGATAT+AGG | + | chr4_4:65611919-65611938 | Msa0695910:intron | 50.0% | |
| TGCTGCGTCATGTCTTCTAG+CGG | + | chr4_4:65612286-65612305 | Msa0695910:CDS | 50.0% | |
| CTGTGTCTCTAGCATAGGGA+GGG | - | chr4_4:65612487-65612506 | None:intergenic | 50.0% | |
| CACACCTGTGTCTCTAGCAT+AGG | - | chr4_4:65612492-65612511 | None:intergenic | 50.0% | |
| GCAATGTATCCCAACTTGGG+AGG | + | chr4_4:65612537-65612556 | Msa0695910:three_prime_UTR | 50.0% | |
| TAAAATGCGTAGGGGGGGTG+TGG | + | chr4_4:65605936-65605955 | Msa0695910:intron | 55.0% | |
| !!! | CGGCGGAAGTATTTTCACGG+CGG | - | chr4_4:65607938-65607957 | None:intergenic | 55.0% |
| CAAAACACGGTCGTAAGCGG+CGG | - | chr4_4:65607955-65607974 | None:intergenic | 55.0% | |
| ACGTGTTTGCACGGTGACAG+AGG | - | chr4_4:65608020-65608039 | None:intergenic | 55.0% | |
| CGGTGACGAACTGCGAAGTT+TGG | + | chr4_4:65608057-65608076 | Msa0695910:intron | 55.0% | |
| GTTAAGCGTAGCACGGTTGC+CGG | + | chr4_4:65608103-65608122 | Msa0695910:intron | 55.0% | |
| TTCAACCACTCCACCGTCTC+CGG | - | chr4_4:65608125-65608144 | None:intergenic | 55.0% | |
| ACGAATCATGTGCCCCTACG+CGG | - | chr4_4:65608311-65608330 | None:intergenic | 55.0% | |
| CTGTTGCTGCTGAGCAGAGA+AGG | + | chr4_4:65608656-65608675 | Msa0695910:CDS | 55.0% | |
| CTCGGAGCAATGATCTCCAG+TGG | - | chr4_4:65609643-65609662 | None:intergenic | 55.0% | |
| AGTGCAGATGTCAACCGGCA+AGG | + | chr4_4:65609862-65609881 | Msa0695910:intron | 55.0% | |
| AAACACATTTCGGCGGGGGT+GGG | - | chr4_4:65610164-65610183 | None:intergenic | 55.0% | |
| AAAACACATTTCGGCGGGGG+TGG | - | chr4_4:65610165-65610184 | None:intergenic | 55.0% | |
| GGACCCATCCACCCAACTAT+AGG | - | chr4_4:65611263-65611282 | None:intergenic | 55.0% | |
| GCCCATGATCTGGATCCACT+AGG | - | chr4_4:65611610-65611629 | None:intergenic | 55.0% | |
| GCTGCGTCATGTCTTCTAGC+GGG | + | chr4_4:65612287-65612306 | Msa0695910:CDS | 55.0% | |
| CCTGTGTCTCTAGCATAGGG+AGG | - | chr4_4:65612488-65612507 | None:intergenic | 55.0% | |
| CCTCCCTATGCTAGAGACAC+AGG | + | chr4_4:65612485-65612504 | Msa0695910:CDS | 55.0% | |
| ! | TTTGAAGGTGTGCGGGTGCG+GGG | - | chr4_4:65605719-65605738 | None:intergenic | 60.0% |
| ! | GTTTGAAGGTGTGCGGGTGC+GGG | - | chr4_4:65605720-65605739 | None:intergenic | 60.0% |
| ! | CGTTTGAAGGTGTGCGGGTG+CGG | - | chr4_4:65605721-65605740 | None:intergenic | 60.0% |
| AACCTCGCCGGAGAAGACAG+AGG | + | chr4_4:65607499-65607518 | Msa0695910:intron | 60.0% | |
| GAACGAAGCATGTTCGGCGG+CGG | + | chr4_4:65608079-65608098 | Msa0695910:intron | 60.0% | |
| ! | CGGCGGTGTTAAGCGTAGCA+CGG | + | chr4_4:65608096-65608115 | Msa0695910:intron | 60.0% |
| AACACATTTCGGCGGGGGTG+GGG | - | chr4_4:65610163-65610182 | None:intergenic | 60.0% | |
| GGGGGGCCCAATTAAAGCCA+TGG | - | chr4_4:65610569-65610588 | None:intergenic | 60.0% | |
| TTAATTGGGCCCCCCGCTAG+TGG | + | chr4_4:65610574-65610593 | Msa0695910:intron | 60.0% | |
| TAATCCCCCGTCCACTAGCG+GGG | - | chr4_4:65610588-65610607 | None:intergenic | 60.0% | |
| CTAATCCCCCGTCCACTAGC+GGG | - | chr4_4:65610589-65610608 | None:intergenic | 60.0% | |
| GCTAATCCCCCGTCCACTAG+CGG | - | chr4_4:65610590-65610609 | None:intergenic | 60.0% | |
| !!! | TCGGTTTTGGACCGGGTACC+AGG | + | chr4_4:65610622-65610641 | Msa0695910:intron | 60.0% |
| CAACTCCGTGCCTACCATGC+AGG | - | chr4_4:65611347-65611366 | None:intergenic | 60.0% | |
| TCTGACATTGCCACCGGCCT+AGG | + | chr4_4:65611499-65611518 | Msa0695910:CDS | 60.0% | |
| ATTGCCACCGGCCTAGGTGT+TGG | + | chr4_4:65611505-65611524 | Msa0695910:CDS | 60.0% | |
| TTGCCACCGGCCTAGGTGTT+GGG | + | chr4_4:65611506-65611525 | Msa0695910:CDS | 60.0% | |
| GGGAGAGCCATGAGACCTAG+TGG | + | chr4_4:65611592-65611611 | Msa0695910:CDS | 60.0% | |
| ! | GCGTAGGGGGGGTGTGGTTA+TGG | + | chr4_4:65605942-65605961 | Msa0695910:intron | 65.0% |
| CTCCTCTGTCTTCTCCGGCG+AGG | - | chr4_4:65607504-65607523 | None:intergenic | 65.0% | |
| CGTAGCACGGTTGCCGGAGA+CGG | + | chr4_4:65608109-65608128 | Msa0695910:intron | 65.0% | |
| AATCCCCCGTCCACTAGCGG+GGG | - | chr4_4:65610587-65610606 | None:intergenic | 65.0% | |
| GAGGGACCCAACACCTAGGC+CGG | - | chr4_4:65611515-65611534 | None:intergenic | 65.0% | |
| AGCACGGTTGCCGGAGACGG+TGG | + | chr4_4:65608112-65608131 | Msa0695910:intron | 70.0% | |
| GGTTGCCGGAGACGGTGGAG+TGG | + | chr4_4:65608117-65608136 | Msa0695910:intron | 70.0% | |
| CGGGGGTGGGGAGGAGTCTT+TGG | - | chr4_4:65610151-65610170 | None:intergenic | 70.0% | |
| ACATTTCGGCGGGGGTGGGG+AGG | - | chr4_4:65610160-65610179 | None:intergenic | 70.0% | |
| TTGGGCCCCCCGCTAGTGGA+CGG | + | chr4_4:65610578-65610597 | Msa0695910:intron | 70.0% | |
| ATCCCCCGTCCACTAGCGGG+GGG | - | chr4_4:65610586-65610605 | None:intergenic | 70.0% | |
| GGACCCAACACCTAGGCCGG+TGG | - | chr4_4:65611512-65611531 | None:intergenic | 70.0% | |
| ! | TGGGCCCCCCGCTAGTGGAC+GGG | + | chr4_4:65610579-65610598 | Msa0695910:intron | 75.0% |
| !! | GGGCCCCCCGCTAGTGGACG+GGG | + | chr4_4:65610580-65610599 | Msa0695910:intron | 80.0% |
| !! | GGCCCCCCGCTAGTGGACGG+GGG | + | chr4_4:65610581-65610600 | Msa0695910:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 65605680 | 65612745 | 65605680 | ID=Msa0695910;Name=Msa0695910 |
| chr4_4 | mRNA | 65605680 | 65612745 | 65605680 | ID=Msa0695910-mRNA-1;Parent=Msa0695910;Name=Msa0695910-mRNA-1;_AED=0.17;_eAED=0.17;_QI=384|1|1|1|0.5|0.6|5|216|183 |
| chr4_4 | exon | 65605680 | 65605947 | 65605680 | ID=Msa0695910-mRNA-1:exon:18984;Parent=Msa0695910-mRNA-1 |
| chr4_4 | exon | 65608316 | 65608414 | 65608316 | ID=Msa0695910-mRNA-1:exon:18985;Parent=Msa0695910-mRNA-1 |
| chr4_4 | exon | 65608578 | 65608684 | 65608578 | ID=Msa0695910-mRNA-1:exon:18986;Parent=Msa0695910-mRNA-1 |
| chr4_4 | exon | 65611451 | 65611653 | 65611451 | ID=Msa0695910-mRNA-1:exon:18987;Parent=Msa0695910-mRNA-1 |
| chr4_4 | exon | 65612271 | 65612745 | 65612271 | ID=Msa0695910-mRNA-1:exon:18988;Parent=Msa0695910-mRNA-1 |
| chr4_4 | five_prime_UTR | 65605680 | 65605947 | 65605680 | ID=Msa0695910-mRNA-1:five_prime_utr;Parent=Msa0695910-mRNA-1 |
| chr4_4 | five_prime_UTR | 65608316 | 65608414 | 65608316 | ID=Msa0695910-mRNA-1:five_prime_utr;Parent=Msa0695910-mRNA-1 |
| chr4_4 | five_prime_UTR | 65608578 | 65608594 | 65608578 | ID=Msa0695910-mRNA-1:five_prime_utr;Parent=Msa0695910-mRNA-1 |
| chr4_4 | CDS | 65608595 | 65608684 | 65608595 | ID=Msa0695910-mRNA-1:cds;Parent=Msa0695910-mRNA-1 |
| chr4_4 | CDS | 65611451 | 65611653 | 65611451 | ID=Msa0695910-mRNA-1:cds;Parent=Msa0695910-mRNA-1 |
| chr4_4 | CDS | 65612271 | 65612529 | 65612271 | ID=Msa0695910-mRNA-1:cds;Parent=Msa0695910-mRNA-1 |
| chr4_4 | three_prime_UTR | 65612530 | 65612745 | 65612530 | ID=Msa0695910-mRNA-1:three_prime_utr;Parent=Msa0695910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
