Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0699370 | XP_039685148.1 | 95.400 | 587 | 25 | 1 | 1 | 587 | 1 | 585 | 0.0 | 1132 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0699370 | sp|P46032|PTR2_ARATH | 73.935 | 587 | 150 | 2 | 1 | 587 | 1 | 584 | 0.0 | 912 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0699370 | A0A396GMH3 | 95.400 | 587 | 25 | 1 | 1 | 587 | 1 | 585 | 0.0 | 1132 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0042180 | Msa0699370 | 0.800711 | 1.267802e-48 | -8.615850e-47 |
Msa0074100 | Msa0699370 | 0.806047 | 9.941506e-50 | -8.615850e-47 |
Msa0616170 | Msa0699370 | 0.864424 | 1.227803e-64 | -8.615850e-47 |
Msa0655570 | Msa0699370 | 0.884538 | 1.760505e-71 | -8.615850e-47 |
Msa0438470 | Msa0699370 | 0.808411 | 3.138722e-50 | -8.615850e-47 |
Msa0512350 | Msa0699370 | 0.809421 | 1.908229e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0699370 | MtrunA17_Chr8g0375291 | 95.400 | 587 | 25 | 1 | 1 | 587 | 1 | 585 | 0.0 | 1132 |
Msa0699370 | MtrunA17_Chr8g0375311 | 86.712 | 587 | 76 | 1 | 1 | 587 | 1 | 585 | 0.0 | 1065 |
Msa0699370 | MtrunA17_Chr8g0375351 | 73.083 | 587 | 156 | 1 | 1 | 587 | 1 | 585 | 0.0 | 922 |
Msa0699370 | MtrunA17_Chr8g0375341 | 72.743 | 587 | 158 | 1 | 1 | 587 | 1 | 585 | 0.0 | 917 |
Msa0699370 | MtrunA17_Chr8g0375321 | 73.402 | 579 | 152 | 1 | 11 | 587 | 4 | 582 | 0.0 | 894 |
Msa0699370 | MtrunA17_Chr8g0375331 | 73.286 | 569 | 152 | 0 | 19 | 587 | 1 | 569 | 0.0 | 867 |
Msa0699370 | MtrunA17_Chr8g0375361 | 68.531 | 572 | 179 | 1 | 15 | 586 | 13 | 583 | 0.0 | 799 |
Msa0699370 | MtrunA17_Chr7g0241741 | 63.475 | 564 | 201 | 5 | 23 | 585 | 3 | 562 | 0.0 | 741 |
Msa0699370 | MtrunA17_Chr4g0005901 | 61.620 | 568 | 213 | 5 | 21 | 587 | 11 | 574 | 0.0 | 730 |
Msa0699370 | MtrunA17_Chr3g0104011 | 62.367 | 566 | 208 | 4 | 22 | 585 | 2 | 564 | 0.0 | 729 |
Msa0699370 | MtrunA17_Chr7g0261881 | 46.655 | 568 | 291 | 4 | 17 | 579 | 2 | 562 | 0.0 | 549 |
Msa0699370 | MtrunA17_Chr7g0261811 | 46.303 | 568 | 293 | 3 | 17 | 579 | 2 | 562 | 0.0 | 549 |
Msa0699370 | MtrunA17_Chr7g0261771 | 46.429 | 560 | 288 | 4 | 27 | 581 | 16 | 568 | 0.0 | 537 |
Msa0699370 | MtrunA17_Chr7g0261791 | 47.048 | 559 | 283 | 5 | 27 | 579 | 14 | 565 | 0.0 | 532 |
Msa0699370 | MtrunA17_Chr3g0142101 | 46.491 | 570 | 290 | 5 | 20 | 587 | 13 | 569 | 3.02e-180 | 521 |
Msa0699370 | MtrunA17_Chr1g0187241 | 45.455 | 572 | 297 | 5 | 15 | 581 | 2 | 563 | 4.49e-180 | 521 |
Msa0699370 | MtrunA17_Chr1g0166791 | 44.227 | 563 | 306 | 3 | 22 | 581 | 4 | 561 | 3.43e-176 | 511 |
Msa0699370 | MtrunA17_Chr7g0261851 | 45.884 | 571 | 297 | 4 | 16 | 581 | 2 | 565 | 3.70e-176 | 511 |
Msa0699370 | MtrunA17_Chr1g0166711 | 44.346 | 566 | 303 | 3 | 22 | 581 | 2 | 561 | 1.06e-172 | 503 |
Msa0699370 | MtrunA17_Chr3g0114501 | 44.190 | 568 | 310 | 4 | 22 | 587 | 2 | 564 | 1.27e-170 | 497 |
Msa0699370 | MtrunA17_Chr3g0142091 | 46.524 | 561 | 283 | 6 | 30 | 586 | 14 | 561 | 1.33e-169 | 494 |
Msa0699370 | MtrunA17_Chr5g0422881 | 44.946 | 554 | 299 | 5 | 36 | 585 | 14 | 565 | 1.95e-169 | 494 |
Msa0699370 | MtrunA17_Chr1g0166741 | 43.911 | 542 | 289 | 3 | 26 | 564 | 11 | 540 | 2.32e-169 | 493 |
Msa0699370 | MtrunA17_Chr5g0400371 | 43.441 | 587 | 326 | 4 | 1 | 582 | 71 | 656 | 2.10e-167 | 492 |
Msa0699370 | MtrunA17_Chr4g0054891 | 42.388 | 578 | 321 | 5 | 11 | 583 | 80 | 650 | 1.32e-161 | 477 |
Msa0699370 | MtrunA17_Chr7g0217461 | 43.531 | 572 | 314 | 5 | 21 | 585 | 3 | 572 | 1.35e-159 | 469 |
Msa0699370 | MtrunA17_Chr7g0255621 | 41.725 | 568 | 322 | 7 | 22 | 584 | 2 | 565 | 3.33e-158 | 466 |
Msa0699370 | MtrunA17_Chr3g0077151 | 43.643 | 582 | 281 | 8 | 13 | 587 | 5 | 546 | 4.08e-158 | 463 |
Msa0699370 | MtrunA17_Chr1g0213711 | 42.376 | 564 | 312 | 7 | 22 | 582 | 2 | 555 | 4.92e-158 | 465 |
Msa0699370 | MtrunA17_Chr3g0112611 | 42.456 | 570 | 313 | 8 | 20 | 584 | 10 | 569 | 7.24e-158 | 464 |
Msa0699370 | MtrunA17_Chr3g0112671 | 42.215 | 578 | 309 | 8 | 12 | 584 | 3 | 560 | 3.91e-157 | 462 |
Msa0699370 | MtrunA17_Chr7g0255611 | 40.625 | 576 | 325 | 8 | 4 | 574 | 1 | 564 | 3.96e-156 | 460 |
Msa0699370 | MtrunA17_Chr1g0166771 | 43.529 | 510 | 273 | 4 | 61 | 567 | 10 | 507 | 9.53e-156 | 457 |
Msa0699370 | MtrunA17_Chr5g0399061 | 42.637 | 584 | 315 | 10 | 16 | 587 | 2 | 577 | 1.99e-155 | 458 |
Msa0699370 | MtrunA17_Chr7g0214461 | 42.435 | 542 | 302 | 5 | 43 | 582 | 79 | 612 | 2.34e-155 | 459 |
Msa0699370 | MtrunA17_Chr4g0014871 | 42.266 | 556 | 294 | 9 | 30 | 581 | 18 | 550 | 4.78e-155 | 456 |
Msa0699370 | MtrunA17_Chr5g0399071 | 43.885 | 556 | 305 | 4 | 34 | 584 | 17 | 570 | 5.92e-155 | 457 |
Msa0699370 | MtrunA17_Chr7g0255601 | 41.607 | 560 | 320 | 6 | 30 | 584 | 15 | 572 | 8.29e-155 | 457 |
Msa0699370 | MtrunA17_Chr4g0014791 | 43.162 | 563 | 290 | 8 | 23 | 581 | 10 | 546 | 3.38e-153 | 451 |
Msa0699370 | MtrunA17_Chr7g0218851 | 41.742 | 551 | 309 | 5 | 36 | 582 | 40 | 582 | 2.88e-152 | 451 |
Msa0699370 | MtrunA17_Chr4g0014841 | 43.106 | 573 | 293 | 9 | 13 | 581 | 3 | 546 | 6.47e-151 | 446 |
Msa0699370 | MtrunA17_Chr7g0240381 | 41.710 | 573 | 317 | 8 | 15 | 585 | 2 | 559 | 8.71e-151 | 446 |
Msa0699370 | MtrunA17_Chr4g0056431 | 43.649 | 559 | 305 | 6 | 34 | 584 | 17 | 573 | 1.45e-148 | 441 |
Msa0699370 | MtrunA17_Chr4g0014781 | 42.446 | 556 | 292 | 7 | 30 | 581 | 17 | 548 | 1.80e-148 | 439 |
Msa0699370 | MtrunA17_Chr4g0014801 | 42.261 | 575 | 301 | 9 | 11 | 581 | 1 | 548 | 1.45e-147 | 437 |
Msa0699370 | MtrunA17_Chr4g0008651 | 40.813 | 566 | 326 | 6 | 22 | 586 | 14 | 571 | 3.81e-147 | 437 |
Msa0699370 | MtrunA17_Chr4g0063591 | 43.585 | 569 | 306 | 6 | 22 | 585 | 2 | 560 | 4.42e-144 | 429 |
Msa0699370 | MtrunA17_Chr7g0261751 | 43.983 | 482 | 234 | 5 | 27 | 473 | 16 | 496 | 6.72e-143 | 424 |
Msa0699370 | MtrunA17_Chr5g0439381 | 41.093 | 567 | 310 | 4 | 23 | 584 | 9 | 556 | 5.26e-140 | 419 |
Msa0699370 | MtrunA17_Chr7g0214731 | 39.826 | 575 | 327 | 9 | 25 | 584 | 42 | 612 | 2.15e-139 | 419 |
Msa0699370 | MtrunA17_Chr8g0353031 | 42.315 | 553 | 283 | 9 | 46 | 585 | 22 | 551 | 1.55e-138 | 414 |
Msa0699370 | MtrunA17_Chr5g0415791 | 40.868 | 553 | 313 | 7 | 42 | 584 | 29 | 577 | 1.16e-136 | 410 |
Msa0699370 | MtrunA17_Chr4g0011041 | 38.169 | 579 | 345 | 6 | 12 | 582 | 6 | 579 | 1.93e-135 | 407 |
Msa0699370 | MtrunA17_Chr7g0261661 | 44.420 | 457 | 242 | 4 | 130 | 581 | 1 | 450 | 6.58e-135 | 402 |
Msa0699370 | MtrunA17_Chr4g0011471 | 40.525 | 533 | 304 | 5 | 57 | 582 | 31 | 557 | 1.61e-133 | 401 |
Msa0699370 | MtrunA17_Chr4g0059971 | 36.181 | 597 | 359 | 8 | 1 | 586 | 1 | 586 | 2.32e-133 | 402 |
Msa0699370 | MtrunA17_Chr2g0284701 | 39.071 | 581 | 338 | 9 | 19 | 584 | 9 | 588 | 2.86e-132 | 399 |
Msa0699370 | MtrunA17_Chr4g0059981 | 37.925 | 588 | 335 | 10 | 11 | 585 | 12 | 582 | 3.20e-131 | 397 |
Msa0699370 | MtrunA17_Chr8g0362781 | 36.027 | 594 | 355 | 7 | 7 | 587 | 3 | 584 | 3.35e-129 | 391 |
Msa0699370 | MtrunA17_Chr3g0133341 | 38.448 | 554 | 321 | 5 | 38 | 584 | 10 | 550 | 3.85e-129 | 390 |
Msa0699370 | MtrunA17_Chr2g0276751 | 38.726 | 581 | 329 | 9 | 6 | 581 | 2 | 560 | 1.54e-128 | 389 |
Msa0699370 | MtrunA17_Chr4g0059991 | 35.304 | 592 | 346 | 6 | 7 | 584 | 5 | 573 | 1.10e-126 | 385 |
Msa0699370 | MtrunA17_Chr8g0379971 | 38.151 | 595 | 335 | 9 | 19 | 584 | 1 | 591 | 3.58e-126 | 384 |
Msa0699370 | MtrunA17_Chr1g0166731 | 41.667 | 456 | 257 | 2 | 129 | 581 | 9 | 458 | 3.69e-124 | 374 |
Msa0699370 | MtrunA17_Chr8g0390331 | 38.686 | 548 | 321 | 8 | 41 | 581 | 14 | 553 | 7.00e-122 | 372 |
Msa0699370 | MtrunA17_Chr8g0362711 | 36.724 | 580 | 342 | 6 | 19 | 584 | 3 | 571 | 1.15e-121 | 371 |
Msa0699370 | MtrunA17_Chr5g0415961 | 37.262 | 577 | 346 | 7 | 19 | 584 | 1 | 572 | 1.02e-120 | 369 |
Msa0699370 | MtrunA17_Chr7g0261731 | 51.497 | 334 | 151 | 3 | 27 | 356 | 16 | 342 | 3.57e-118 | 354 |
Msa0699370 | MtrunA17_Chr4g0014861 | 42.991 | 428 | 226 | 5 | 158 | 581 | 12 | 425 | 3.83e-116 | 352 |
Msa0699370 | MtrunA17_Chr1g0193391 | 35.294 | 561 | 342 | 7 | 29 | 584 | 2 | 546 | 9.82e-116 | 357 |
Msa0699370 | MtrunA17_Chr7g0271221 | 35.897 | 546 | 331 | 6 | 42 | 584 | 17 | 546 | 5.96e-115 | 354 |
Msa0699370 | MtrunA17_Chr2g0331521 | 36.248 | 549 | 334 | 7 | 42 | 581 | 22 | 563 | 2.20e-112 | 347 |
Msa0699370 | MtrunA17_Chr1g0157601 | 36.096 | 543 | 332 | 6 | 46 | 581 | 19 | 553 | 8.68e-111 | 343 |
Msa0699370 | MtrunA17_Chr1g0157611 | 35.519 | 549 | 337 | 5 | 41 | 581 | 15 | 554 | 3.48e-110 | 341 |
Msa0699370 | MtrunA17_Chr1g0147631 | 36.264 | 546 | 328 | 8 | 46 | 581 | 29 | 564 | 7.76e-110 | 341 |
Msa0699370 | MtrunA17_Chr2g0331481 | 35.870 | 552 | 332 | 10 | 42 | 581 | 25 | 566 | 8.42e-110 | 342 |
Msa0699370 | MtrunA17_Chr2g0331471 | 35.688 | 552 | 333 | 10 | 42 | 581 | 88 | 629 | 1.06e-109 | 344 |
Msa0699370 | MtrunA17_Chr3g0082631 | 40.426 | 470 | 244 | 8 | 129 | 585 | 14 | 460 | 1.85e-108 | 333 |
Msa0699370 | MtrunA17_Chr4g0069581 | 37.500 | 528 | 313 | 6 | 61 | 585 | 5 | 518 | 2.50e-107 | 333 |
Msa0699370 | MtrunA17_Chr4g0060001 | 34.938 | 561 | 337 | 10 | 43 | 585 | 30 | 580 | 2.09e-105 | 330 |
Msa0699370 | MtrunA17_Chr8g0379991 | 37.324 | 568 | 306 | 8 | 63 | 584 | 1 | 564 | 2.15e-105 | 329 |
Msa0699370 | MtrunA17_Chr2g0331511 | 35.091 | 550 | 339 | 10 | 42 | 581 | 21 | 562 | 6.86e-104 | 327 |
Msa0699370 | MtrunA17_Chr4g0003761 | 34.545 | 550 | 338 | 11 | 43 | 581 | 31 | 569 | 8.36e-103 | 323 |
Msa0699370 | MtrunA17_Chr7g0240271 | 32.224 | 571 | 375 | 7 | 19 | 581 | 1 | 567 | 7.05e-102 | 320 |
Msa0699370 | MtrunA17_Chr8g0362801 | 37.124 | 466 | 277 | 8 | 130 | 584 | 1 | 461 | 1.87e-101 | 315 |
Msa0699370 | MtrunA17_Chr1g0177591 | 34.206 | 573 | 331 | 18 | 22 | 581 | 25 | 564 | 6.08e-99 | 312 |
Msa0699370 | MtrunA17_Chr2g0331461 | 33.454 | 553 | 344 | 10 | 42 | 581 | 25 | 566 | 9.33e-99 | 313 |
Msa0699370 | MtrunA17_Chr1g0157621 | 35.551 | 526 | 323 | 8 | 63 | 581 | 1 | 517 | 4.47e-98 | 310 |
Msa0699370 | MtrunA17_Chr3g0142111 | 49.835 | 303 | 151 | 1 | 20 | 321 | 24 | 326 | 7.72e-97 | 299 |
Msa0699370 | MtrunA17_Chr7g0240281 | 34.307 | 548 | 346 | 8 | 42 | 579 | 24 | 567 | 4.08e-94 | 300 |
Msa0699370 | MtrunA17_Chr6g0451841 | 33.808 | 562 | 315 | 11 | 49 | 587 | 12 | 539 | 1.37e-92 | 295 |
Msa0699370 | MtrunA17_Chr5g0415841 | 34.549 | 466 | 287 | 7 | 130 | 584 | 1 | 459 | 1.02e-91 | 290 |
Msa0699370 | MtrunA17_Chr7g0235521 | 33.261 | 460 | 295 | 7 | 130 | 581 | 1 | 456 | 8.18e-83 | 267 |
Msa0699370 | MtrunA17_Chr7g0240181 | 33.261 | 460 | 295 | 7 | 130 | 581 | 1 | 456 | 1.16e-81 | 264 |
Msa0699370 | MtrunA17_Chr7g0240211 | 33.261 | 460 | 295 | 7 | 130 | 581 | 1 | 456 | 1.34e-81 | 264 |
Msa0699370 | MtrunA17_Chr7g0240131 | 33.043 | 460 | 296 | 7 | 130 | 581 | 1 | 456 | 2.27e-81 | 263 |
Msa0699370 | MtrunA17_Chr1g0177611 | 34.989 | 463 | 262 | 14 | 130 | 581 | 1 | 435 | 1.43e-79 | 258 |
Msa0699370 | MtrunA17_Chr2g0326211 | 30.727 | 550 | 341 | 9 | 46 | 582 | 23 | 545 | 4.22e-79 | 259 |
Msa0699370 | MtrunA17_Chr2g0325951 | 31.927 | 545 | 341 | 10 | 46 | 582 | 23 | 545 | 5.84e-78 | 256 |
Msa0699370 | MtrunA17_Chr2g0325961 | 32.058 | 549 | 336 | 10 | 46 | 582 | 23 | 546 | 1.95e-76 | 252 |
Msa0699370 | MtrunA17_Chr1g0177631 | 34.259 | 432 | 264 | 7 | 156 | 581 | 18 | 435 | 9.53e-75 | 245 |
Msa0699370 | MtrunA17_Chr7g0240151 | 32.174 | 460 | 282 | 8 | 130 | 581 | 1 | 438 | 9.69e-75 | 245 |
Msa0699370 | MtrunA17_Chr3g0142121 | 42.647 | 272 | 142 | 4 | 317 | 587 | 13 | 271 | 1.66e-68 | 223 |
Msa0699370 | MtrunA17_Chr3g0112631 | 41.758 | 273 | 154 | 4 | 314 | 584 | 3 | 272 | 3.48e-66 | 218 |
Msa0699370 | MtrunA17_Chr4g0060071 | 38.489 | 278 | 161 | 2 | 310 | 586 | 32 | 300 | 7.50e-63 | 209 |
Msa0699370 | MtrunA17_Chr7g0234151 | 30.549 | 455 | 275 | 8 | 129 | 581 | 3 | 418 | 5.13e-59 | 202 |
Msa0699370 | MtrunA17_Chr7g0234381 | 30.769 | 455 | 274 | 9 | 129 | 581 | 3 | 418 | 1.13e-58 | 201 |
Msa0699370 | MtrunA17_Chr7g0234181 | 30.820 | 451 | 271 | 9 | 133 | 581 | 2 | 413 | 2.08e-58 | 201 |
Msa0699370 | MtrunA17_Chr7g0261721 | 41.753 | 194 | 113 | 0 | 388 | 581 | 5 | 198 | 2.10e-48 | 168 |
Msa0699370 | MtrunA17_Chr3g0112651 | 41.919 | 198 | 107 | 3 | 119 | 314 | 11 | 202 | 2.43e-45 | 159 |
Msa0699370 | MtrunA17_Chr1g0147591 | 36.181 | 199 | 114 | 4 | 169 | 361 | 9 | 200 | 1.35e-37 | 138 |
Msa0699370 | MtrunA17_Chr1g0166721 | 50.388 | 129 | 56 | 2 | 22 | 147 | 2 | 125 | 3.34e-37 | 135 |
Msa0699370 | MtrunA17_Chr7g0261671 | 54.902 | 102 | 46 | 0 | 27 | 128 | 17 | 118 | 3.32e-34 | 125 |
Msa0699370 | MtrunA17_Chr4g0060061 | 48.760 | 121 | 62 | 0 | 152 | 272 | 8 | 128 | 2.49e-31 | 118 |
Msa0699370 | MtrunA17_Chr7g0261831 | 36.066 | 183 | 100 | 4 | 269 | 441 | 1 | 176 | 3.94e-30 | 117 |
Msa0699370 | MtrunA17_Chr4g0014851 | 43.925 | 107 | 60 | 0 | 30 | 136 | 18 | 124 | 6.13e-26 | 104 |
Msa0699370 | MtrunA17_Chr2g0326221 | 29.237 | 236 | 137 | 5 | 348 | 582 | 15 | 221 | 1.48e-23 | 99.4 |
Msa0699370 | MtrunA17_Chr3g0112661 | 47.475 | 99 | 52 | 0 | 30 | 128 | 19 | 117 | 2.53e-22 | 93.2 |
Msa0699370 | MtrunA17_Chr8g0362791 | 49.315 | 73 | 37 | 0 | 48 | 120 | 42 | 114 | 1.35e-18 | 82.8 |
Msa0699370 | MtrunA17_Chr4g0060051 | 35.514 | 107 | 69 | 0 | 22 | 128 | 2 | 108 | 2.79e-14 | 70.1 |
Msa0699370 | MtrunA17_Chr3g0082621 | 45.070 | 71 | 39 | 0 | 58 | 128 | 2 | 72 | 4.21e-14 | 68.2 |
Msa0699370 | MtrunA17_Chr8g0382591 | 38.793 | 116 | 67 | 4 | 314 | 425 | 3 | 118 | 8.26e-14 | 68.9 |
Msa0699370 | MtrunA17_Chr1g0147581 | 36.585 | 123 | 69 | 4 | 438 | 558 | 1 | 116 | 8.56e-14 | 68.2 |
Msa0699370 | MtrunA17_Chr7g0261821 | 48.276 | 58 | 30 | 0 | 522 | 579 | 1 | 58 | 1.81e-12 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0699370 | AT2G02040.1 | 73.935 | 587 | 150 | 2 | 1 | 587 | 1 | 584 | 0.0 | 912 |
Msa0699370 | AT1G62200.1 | 64.094 | 596 | 196 | 4 | 1 | 586 | 2 | 589 | 0.0 | 787 |
Msa0699370 | AT1G62200.3 | 61.280 | 625 | 195 | 5 | 1 | 586 | 16 | 632 | 0.0 | 771 |
Msa0699370 | AT1G62200.2 | 61.280 | 625 | 195 | 5 | 1 | 586 | 2 | 618 | 0.0 | 771 |
Msa0699370 | AT3G54140.1 | 62.898 | 566 | 207 | 3 | 22 | 586 | 2 | 565 | 0.0 | 748 |
Msa0699370 | AT3G54140.2 | 62.898 | 566 | 207 | 3 | 22 | 586 | 2 | 565 | 0.0 | 748 |
Msa0699370 | AT2G02020.1 | 62.457 | 586 | 177 | 7 | 1 | 585 | 1 | 544 | 0.0 | 738 |
Msa0699370 | AT5G01180.2 | 60.387 | 568 | 221 | 4 | 21 | 587 | 2 | 566 | 0.0 | 724 |
Msa0699370 | AT5G01180.3 | 60.387 | 568 | 221 | 4 | 21 | 587 | 2 | 566 | 0.0 | 724 |
Msa0699370 | AT5G01180.1 | 60.387 | 568 | 221 | 4 | 21 | 587 | 2 | 566 | 0.0 | 724 |
Msa0699370 | AT2G02020.2 | 59.215 | 586 | 175 | 8 | 1 | 585 | 1 | 523 | 0.0 | 679 |
Msa0699370 | AT5G46050.1 | 44.627 | 549 | 291 | 5 | 21 | 564 | 4 | 544 | 2.81e-169 | 494 |
Msa0699370 | AT1G68570.1 | 45.518 | 569 | 303 | 6 | 21 | 584 | 2 | 568 | 1.08e-163 | 480 |
Msa0699370 | AT1G32450.1 | 42.757 | 573 | 317 | 7 | 19 | 582 | 12 | 582 | 1.13e-163 | 481 |
Msa0699370 | AT2G40460.1 | 43.009 | 565 | 309 | 4 | 22 | 584 | 2 | 555 | 3.82e-162 | 476 |
Msa0699370 | AT5G46040.1 | 43.169 | 549 | 299 | 5 | 21 | 564 | 4 | 544 | 1.69e-159 | 469 |
Msa0699370 | AT1G68570.2 | 46.816 | 534 | 279 | 5 | 56 | 584 | 5 | 538 | 1.44e-158 | 466 |
Msa0699370 | AT2G26690.1 | 44.640 | 569 | 299 | 7 | 22 | 585 | 2 | 559 | 1.05e-155 | 459 |
Msa0699370 | AT4G21680.1 | 42.487 | 579 | 315 | 7 | 21 | 586 | 2 | 575 | 1.96e-155 | 459 |
Msa0699370 | AT3G53960.1 | 40.636 | 566 | 326 | 5 | 22 | 584 | 15 | 573 | 5.79e-150 | 445 |
Msa0699370 | AT2G37900.1 | 39.138 | 580 | 337 | 6 | 12 | 587 | 4 | 571 | 8.35e-147 | 436 |
Msa0699370 | AT2G26690.2 | 44.860 | 535 | 279 | 7 | 56 | 585 | 3 | 526 | 9.53e-146 | 432 |
Msa0699370 | AT5G19640.1 | 40.422 | 569 | 316 | 7 | 19 | 582 | 32 | 582 | 2.19e-145 | 433 |
Msa0699370 | AT1G12110.1 | 42.857 | 560 | 308 | 5 | 34 | 585 | 17 | 572 | 4.44e-145 | 432 |
Msa0699370 | AT1G22540.1 | 41.398 | 558 | 301 | 7 | 32 | 585 | 18 | 553 | 1.54e-144 | 429 |
Msa0699370 | AT2G26690.3 | 44.847 | 524 | 273 | 7 | 67 | 585 | 2 | 514 | 6.14e-142 | 422 |
Msa0699370 | AT3G54450.1 | 38.919 | 555 | 307 | 8 | 42 | 585 | 10 | 543 | 5.54e-141 | 420 |
Msa0699370 | AT1G72140.1 | 41.607 | 560 | 285 | 8 | 32 | 581 | 22 | 549 | 4.86e-139 | 415 |
Msa0699370 | AT1G69870.1 | 39.927 | 551 | 320 | 6 | 41 | 584 | 48 | 594 | 9.71e-139 | 417 |
Msa0699370 | AT5G13400.1 | 39.304 | 575 | 328 | 9 | 25 | 584 | 43 | 611 | 1.33e-135 | 409 |
Msa0699370 | AT1G59740.1 | 39.437 | 568 | 326 | 8 | 15 | 575 | 12 | 568 | 2.75e-134 | 404 |
Msa0699370 | AT1G22570.1 | 41.367 | 556 | 294 | 9 | 15 | 562 | 7 | 538 | 8.30e-132 | 397 |
Msa0699370 | AT1G22550.1 | 38.448 | 580 | 322 | 9 | 15 | 585 | 7 | 560 | 1.06e-128 | 389 |
Msa0699370 | AT1G72130.1 | 39.312 | 552 | 294 | 9 | 41 | 587 | 21 | 536 | 1.33e-128 | 388 |
Msa0699370 | AT3G21670.1 | 39.576 | 566 | 312 | 6 | 30 | 584 | 12 | 558 | 3.83e-128 | 389 |
Msa0699370 | AT1G69850.1 | 37.543 | 578 | 345 | 6 | 21 | 584 | 4 | 579 | 8.89e-128 | 387 |
Msa0699370 | AT1G33440.1 | 38.435 | 588 | 326 | 9 | 3 | 581 | 7 | 567 | 2.25e-127 | 387 |
Msa0699370 | AT3G16180.1 | 39.318 | 557 | 318 | 10 | 38 | 581 | 16 | 565 | 5.63e-126 | 383 |
Msa0699370 | AT2G37900.2 | 39.165 | 503 | 292 | 5 | 87 | 587 | 2 | 492 | 6.00e-126 | 380 |
Msa0699370 | AT5G46050.2 | 43.409 | 440 | 236 | 5 | 130 | 564 | 1 | 432 | 1.13e-125 | 378 |
Msa0699370 | AT1G27040.2 | 37.390 | 567 | 321 | 5 | 30 | 582 | 9 | 555 | 1.41e-125 | 381 |
Msa0699370 | AT1G27040.1 | 37.390 | 567 | 321 | 5 | 30 | 582 | 13 | 559 | 1.66e-125 | 381 |
Msa0699370 | AT1G72125.1 | 39.267 | 573 | 318 | 11 | 19 | 585 | 9 | 557 | 8.37e-125 | 379 |
Msa0699370 | AT1G18880.1 | 36.177 | 586 | 340 | 11 | 11 | 584 | 3 | 566 | 1.80e-123 | 376 |
Msa0699370 | AT1G52190.1 | 37.184 | 554 | 328 | 8 | 42 | 581 | 19 | 566 | 3.19e-123 | 376 |
Msa0699370 | AT1G22570.2 | 41.473 | 516 | 276 | 7 | 55 | 562 | 4 | 501 | 5.12e-123 | 373 |
Msa0699370 | AT1G72120.1 | 38.974 | 585 | 315 | 12 | 11 | 585 | 1 | 553 | 1.27e-121 | 370 |
Msa0699370 | AT1G27040.3 | 38.033 | 539 | 300 | 5 | 58 | 582 | 9 | 527 | 1.57e-120 | 367 |
Msa0699370 | AT1G27080.1 | 36.057 | 563 | 333 | 10 | 36 | 587 | 5 | 551 | 6.52e-113 | 349 |
Msa0699370 | AT5G62730.1 | 34.880 | 582 | 328 | 7 | 20 | 581 | 32 | 582 | 1.82e-109 | 340 |
Msa0699370 | AT5G62680.1 | 35.935 | 551 | 334 | 10 | 48 | 584 | 47 | 592 | 1.89e-108 | 338 |
Msa0699370 | AT1G69860.1 | 36.814 | 565 | 333 | 8 | 29 | 587 | 6 | 552 | 6.97e-105 | 327 |
Msa0699370 | AT3G47960.1 | 34.075 | 584 | 372 | 7 | 11 | 584 | 28 | 608 | 8.56e-103 | 324 |
Msa0699370 | AT5G28470.2 | 32.305 | 551 | 358 | 8 | 38 | 581 | 11 | 553 | 1.08e-102 | 322 |
Msa0699370 | AT5G62730.2 | 34.964 | 552 | 308 | 7 | 50 | 581 | 3 | 523 | 2.26e-102 | 320 |
Msa0699370 | AT5G14940.1 | 34.107 | 560 | 329 | 10 | 42 | 584 | 5 | 541 | 1.58e-101 | 318 |
Msa0699370 | AT1G27080.2 | 36.329 | 523 | 307 | 9 | 75 | 587 | 3 | 509 | 1.59e-101 | 318 |
Msa0699370 | AT1G72130.2 | 39.492 | 433 | 230 | 7 | 159 | 587 | 14 | 418 | 2.54e-100 | 311 |
Msa0699370 | AT1G72130.3 | 39.492 | 433 | 230 | 7 | 159 | 587 | 14 | 418 | 2.54e-100 | 311 |
Msa0699370 | AT5G28470.1 | 32.123 | 551 | 357 | 9 | 38 | 581 | 11 | 551 | 1.23e-99 | 314 |
Msa0699370 | AT3G01350.1 | 32.504 | 563 | 343 | 12 | 41 | 582 | 3 | 549 | 9.82e-90 | 288 |
Msa0699370 | AT3G25260.1 | 31.636 | 550 | 329 | 12 | 34 | 581 | 11 | 515 | 2.83e-87 | 280 |
Msa0699370 | AT3G45650.1 | 29.381 | 565 | 366 | 7 | 28 | 585 | 6 | 544 | 1.62e-84 | 274 |
Msa0699370 | AT3G45680.1 | 30.159 | 567 | 358 | 12 | 28 | 585 | 6 | 543 | 8.67e-83 | 270 |
Msa0699370 | AT3G45660.2 | 29.352 | 586 | 377 | 9 | 4 | 585 | 12 | 564 | 8.67e-80 | 262 |
Msa0699370 | AT3G45650.2 | 28.257 | 591 | 365 | 8 | 28 | 585 | 6 | 570 | 9.39e-80 | 263 |
Msa0699370 | AT3G45660.1 | 30.165 | 547 | 355 | 7 | 43 | 585 | 20 | 543 | 2.69e-79 | 260 |
Msa0699370 | AT3G45660.3 | 30.165 | 547 | 355 | 7 | 43 | 585 | 20 | 543 | 2.69e-79 | 260 |
Msa0699370 | AT3G25280.1 | 30.769 | 559 | 328 | 10 | 34 | 581 | 11 | 521 | 7.81e-78 | 256 |
Msa0699370 | AT3G45720.1 | 29.259 | 540 | 351 | 10 | 52 | 585 | 27 | 541 | 7.34e-75 | 249 |
Msa0699370 | AT3G45710.1 | 29.167 | 552 | 356 | 11 | 43 | 585 | 20 | 545 | 1.25e-74 | 248 |
Msa0699370 | AT3G45700.1 | 28.309 | 544 | 358 | 10 | 46 | 585 | 18 | 533 | 1.11e-70 | 238 |
Msa0699370 | AT3G45690.1 | 27.872 | 531 | 314 | 12 | 46 | 570 | 20 | 487 | 8.71e-62 | 213 |
Msa0699370 | AT2G38100.2 | 27.360 | 519 | 332 | 14 | 72 | 581 | 2 | 484 | 3.49e-41 | 156 |
Msa0699370 | AT5G11570.1 | 35.769 | 260 | 155 | 4 | 326 | 583 | 229 | 478 | 7.70e-41 | 155 |
Msa0699370 | AT5G11570.1 | 34.177 | 237 | 144 | 6 | 30 | 261 | 2 | 231 | 1.51e-34 | 137 |
Msa0699370 | AT2G38100.1 | 27.360 | 519 | 332 | 14 | 72 | 581 | 18 | 500 | 1.28e-40 | 155 |
Msa0699370 | AT2G38100.3 | 27.553 | 519 | 331 | 13 | 72 | 581 | 24 | 506 | 1.58e-40 | 155 |
Find 146 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGGCATTCCTACTTTATTTA+TGG | 0.075098 | 4_4:+70009868 | Msa0699370:CDS |
ATACCTCAGTATTTCTTATT+TGG | 0.084877 | 4_4:+70010750 | Msa0699370:CDS |
CAATATGCTGCCTTCTTCTT+TGG | 0.186574 | 4_4:+70009638 | Msa0699370:CDS |
TGATACGAATATTTCCAATT+TGG | 0.192805 | 4_4:+70010364 | Msa0699370:CDS |
GATGGTTCGGTTGACTTTAA+AGG | 0.204057 | 4_4:+70008619 | Msa0699370:CDS |
AAACCATGTGTGTCGTCTTT+TGG | 0.206810 | 4_4:+70009695 | Msa0699370:CDS |
TACCTCAGTATTTCTTATTT+GGG | 0.227659 | 4_4:+70010751 | Msa0699370:CDS |
ACTTGGAACATTCTTGTAAT+AGG | 0.247470 | 4_4:-70009956 | None:intergenic |
TGACCTTTGTTCAGGTTATC+TGG | 0.248081 | 4_4:-70010957 | None:intergenic |
GGCATTCCTACTTTATTTAT+GGG | 0.268231 | 4_4:+70009869 | Msa0699370:CDS |
TGCTAAAGATTGAGATAAAA+AGG | 0.277050 | 4_4:-70010626 | None:intergenic |
ATCCCTTCTTAACCCTTTCT+TGG | 0.284156 | 4_4:-70009745 | None:intergenic |
ACTATTCCGGCAGCCCAAAT+TGG | 0.290011 | 4_4:-70010378 | None:intergenic |
GACTCTTTCTGCATCGGTTC+CGG | 0.301717 | 4_4:+70009562 | Msa0699370:CDS |
ACTCTCAACAGAGCTATATA+TGG | 0.316829 | 4_4:+70007772 | Msa0699370:exon |
GTTTAATCAATTGAAATTCA+TGG | 0.316984 | 4_4:-70007714 | None:intergenic |
AAGGGATTCTTCTTCCTCTA+TGG | 0.317035 | 4_4:-70007798 | None:intergenic |
GATACGAATATTTCCAATTT+GGG | 0.322718 | 4_4:+70010365 | Msa0699370:CDS |
TTGAAACCTGCTGACTGTTT+CGG | 0.332187 | 4_4:+70009587 | Msa0699370:CDS |
TCCCTTCTTAACCCTTTCTT+GGG | 0.332851 | 4_4:-70009744 | None:intergenic |
TTGTGAAGAATCCCTTCTTC+AGG | 0.341091 | 4_4:+70007829 | Msa0699370:CDS |
CAGCAACAGGTTTATCAATA+AGG | 0.341199 | 4_4:-70010704 | None:intergenic |
AATCAAGATGACCTTTGTTC+AGG | 0.347116 | 4_4:-70010965 | None:intergenic |
ATTCATACTTGGGGCGATAC+TGG | 0.349708 | 4_4:+70008957 | Msa0699370:CDS |
GAAAATGCAGGCTGGGGTAT+TGG | 0.355845 | 4_4:+70009842 | Msa0699370:CDS |
CATTTCCTTCATGTAGTTTG+TGG | 0.357245 | 4_4:-70008859 | None:intergenic |
AACATAGGAGCCCTTGTATC+AGG | 0.359748 | 4_4:+70009797 | Msa0699370:CDS |
CATAAACTCCGCATGGCATC+TGG | 0.362103 | 4_4:-70010828 | None:intergenic |
TGTTATCTTACACCACTCAT+TGG | 0.374138 | 4_4:+70008920 | Msa0699370:CDS |
ATACTAATTGGTACAGCAAC+AGG | 0.384112 | 4_4:-70010717 | None:intergenic |
TGCGAACGTTTGGCATACTA+TGG | 0.386304 | 4_4:+70008806 | Msa0699370:CDS |
ATGGTTCGGTTGACTTTAAA+GGG | 0.390066 | 4_4:+70008620 | Msa0699370:CDS |
CCCCTCGCAAGGAAATTTAC+AGG | 0.400106 | 4_4:+70010561 | Msa0699370:CDS |
ATGTAGTTTGTGGGTGAGAT+AGG | 0.402929 | 4_4:-70008849 | None:intergenic |
CAATGAATGTTGCGAACGTT+TGG | 0.402936 | 4_4:+70008796 | Msa0699370:CDS |
TTATTTATGGGATTAGCTAT+AGG | 0.403195 | 4_4:+70009881 | Msa0699370:CDS |
ACTACACAAGGTGGAAATCC+TGG | 0.403776 | 4_4:+70010927 | Msa0699370:CDS |
GACAAGAGTTCTGCAATTCT+AGG | 0.404657 | 4_4:+70010049 | Msa0699370:CDS |
CCAGTATTCTGCTTGAGAAC+AGG | 0.412540 | 4_4:-70008646 | None:intergenic |
GGTCTCTACCTGATTGCACT+TGG | 0.418780 | 4_4:+70009659 | Msa0699370:CDS |
GCGGAGTTTATGCAGTGCTT+TGG | 0.423325 | 4_4:+70010839 | Msa0699370:CDS |
TCAAGCAGAATACTGGCAAT+TGG | 0.423780 | 4_4:+70008653 | Msa0699370:CDS |
CCACAAACATTGTTGACAGC+TGG | 0.430858 | 4_4:-70010419 | None:intergenic |
CTATAGTGTCTGATGCTGAT+AGG | 0.436826 | 4_4:+70010274 | Msa0699370:CDS |
AATTCTAGGAAGTCGGAAAC+TGG | 0.440656 | 4_4:+70010063 | Msa0699370:CDS |
GCATATCACAAGATGATGAA+TGG | 0.442270 | 4_4:-70011237 | None:intergenic |
GCGGCGACTATTCTAATTTG+TGG | 0.443950 | 4_4:+70010301 | Msa0699370:CDS |
TCTGGGTTCCTGTCTATGAC+AGG | 0.451716 | 4_4:+70010529 | Msa0699370:CDS |
CACCAGTCCCAAGTGCAATC+AGG | 0.453567 | 4_4:-70009667 | None:intergenic |
TACCTGATTGCACTTGGGAC+TGG | 0.453793 | 4_4:+70009665 | Msa0699370:CDS |
TATTCTAGCTGATTCATACT+TGG | 0.454933 | 4_4:+70008946 | Msa0699370:CDS |
CCTGTTCTCAAGCAGAATAC+TGG | 0.458649 | 4_4:+70008646 | Msa0699370:CDS |
GCAGGCTGGGGTATTGGATT+CGG | 0.460754 | 4_4:+70009848 | Msa0699370:CDS |
TACATTGACTCTTTCTGCAT+CGG | 0.462493 | 4_4:+70009556 | Msa0699370:CDS |
CAATAAAAGTGCCTGATACA+AGG | 0.464352 | 4_4:-70009808 | None:intergenic |
ATTTCCTTCATGTAGTTTGT+GGG | 0.467430 | 4_4:-70008858 | None:intergenic |
ATTCTAGCTGATTCATACTT+GGG | 0.467675 | 4_4:+70008947 | Msa0699370:CDS |
TCCGCATGGCATCTGGAGAT+TGG | 0.473235 | 4_4:-70010821 | None:intergenic |
ATGATACTGATCCCCAAGAA+AGG | 0.475732 | 4_4:+70009732 | Msa0699370:CDS |
ACTTAGCTTCTTAAATATGT+TGG | 0.477213 | 4_4:+70011010 | Msa0699370:CDS |
GAGTTGCAAAGAATGGGAAT+TGG | 0.483571 | 4_4:+70010603 | Msa0699370:CDS |
AAAGCTTGTCCATTTATCCT+AGG | 0.484795 | 4_4:+70008676 | Msa0699370:CDS |
GTCTCTACCTGATTGCACTT+GGG | 0.485345 | 4_4:+70009660 | Msa0699370:CDS |
GCGATACACCGGAGATGGTT+CGG | 0.489091 | 4_4:+70008606 | Msa0699370:CDS |
TCAAAACTTGAGAGGGAAGC+TGG | 0.492545 | 4_4:-70010489 | None:intergenic |
TACAAGAATGTTCCAAGTTG+TGG | 0.492885 | 4_4:+70009961 | Msa0699370:CDS |
CTCTCAACAGAGCTATATAT+GGG | 0.493850 | 4_4:+70007773 | Msa0699370:exon |
TCCCCAAGAAAGGGTTAAGA+AGG | 0.498271 | 4_4:+70009742 | Msa0699370:CDS |
AAAGTCAACCGAACCATCTC+CGG | 0.498901 | 4_4:-70008614 | None:intergenic |
CACAAACATTGTTGACAGCT+GGG | 0.503033 | 4_4:-70010418 | None:intergenic |
ATATTTCCAATTTGGGCTGC+CGG | 0.503529 | 4_4:+70010372 | Msa0699370:CDS |
GCCTGTAAATTTCCTTGCGA+GGG | 0.505613 | 4_4:-70010562 | None:intergenic |
TACAAGAGACTACTATCCTC+AGG | 0.507492 | 4_4:-70010016 | None:intergenic |
AAACATCAACAAATTCGAAA+AGG | 0.513087 | 4_4:+70007733 | Msa0699370:five_prime_UTR |
GCATATTGTGAAGGAGTGGC+TGG | 0.517446 | 4_4:-70009623 | None:intergenic |
GATTCAAGAAAATGCAGGCT+GGG | 0.519096 | 4_4:+70009835 | Msa0699370:CDS |
CATATCACAAGATGATGAAT+GGG | 0.520867 | 4_4:-70011236 | None:intergenic |
CCAGCTGTCAACAATGTTTG+TGG | 0.523589 | 4_4:+70010419 | Msa0699370:CDS |
CTGCAAGACATGTGACCACT+TGG | 0.523854 | 4_4:+70008888 | Msa0699370:CDS |
GAAAAGATGCTACCACAACT+TGG | 0.524058 | 4_4:-70009973 | None:intergenic |
GAGAAAGGGGAACCTGAAGA+AGG | 0.525020 | 4_4:-70007841 | None:intergenic |
GCTAATCCCATAAATAAAGT+AGG | 0.526869 | 4_4:-70009875 | None:intergenic |
CCCTTCTTAACCCTTTCTTG+GGG | 0.536546 | 4_4:-70009743 | None:intergenic |
AGAATTGCAGAACTCTTGTC+CGG | 0.537190 | 4_4:-70010046 | None:intergenic |
GGATTCAAGAAAATGCAGGC+TGG | 0.537452 | 4_4:+70009834 | Msa0699370:CDS |
CTGATTGCACTTGGGACTGG+TGG | 0.541451 | 4_4:+70009668 | Msa0699370:CDS |
ACTATAATCCTGTCATAGAC+AGG | 0.541753 | 4_4:-70010537 | None:intergenic |
TGCCTGTAAATTTCCTTGCG+AGG | 0.542157 | 4_4:-70010563 | None:intergenic |
GCTATATATGGGTTCCATAG+AGG | 0.543515 | 4_4:+70007784 | Msa0699370:exon |
TGGAGCATAGTGATGAACTA+AGG | 0.548258 | 4_4:+70010083 | Msa0699370:CDS |
AGCAGGCGATACACCGGAGA+TGG | 0.550781 | 4_4:+70008601 | Msa0699370:CDS |
AATAAAAGTGCCTGATACAA+GGG | 0.550989 | 4_4:-70009807 | None:intergenic |
GGATTATAGTTCCCCTCGCA+AGG | 0.552068 | 4_4:+70010550 | Msa0699370:CDS |
TCAGGCATTGATTAAGAGTG+TGG | 0.553577 | 4_4:+70011086 | Msa0699370:three_prime_UTR |
ACCAATACTTGTGTCCATCA+TGG | 0.554954 | 4_4:-70010451 | None:intergenic |
GAGACTTTGCACTGTGACAC+AGG | 0.556132 | 4_4:+70010323 | Msa0699370:CDS |
CAGGTAGAGACCAAAGAAGA+AGG | 0.556686 | 4_4:-70009648 | None:intergenic |
CTACACAAGGTGGAAATCCT+GGG | 0.557038 | 4_4:+70010928 | Msa0699370:CDS |
GAAGAGAGCAGGCGATACAC+CGG | 0.557133 | 4_4:+70008595 | Msa0699370:CDS |
ATCTGAAGGATGAAGAGAGC+AGG | 0.559390 | 4_4:+70008584 | Msa0699370:intron |
TTGCACTGTGACACAGGTGG+AGG | 0.563549 | 4_4:+70010329 | Msa0699370:CDS |
CAGTCAGCAGGTTTCAATGC+CGG | 0.563916 | 4_4:-70009581 | None:intergenic |
CTCACCCACAAACTACATGA+AGG | 0.567905 | 4_4:+70008854 | Msa0699370:CDS |
TGATACTGATCCCCAAGAAA+GGG | 0.568693 | 4_4:+70009733 | Msa0699370:CDS |
ACCATGATGGACACAAGTAT+TGG | 0.569081 | 4_4:+70010450 | Msa0699370:CDS |
ACCTCAGTATTTCTTATTTG+GGG | 0.570703 | 4_4:+70010752 | Msa0699370:CDS |
TCAACAATGTTTGTGGAACA+AGG | 0.575130 | 4_4:+70010426 | Msa0699370:CDS |
AGCAGAAGTATTCACAAACG+TGG | 0.576227 | 4_4:+70010776 | Msa0699370:CDS |
GCAGAAGTATTCACAAACGT+GGG | 0.583778 | 4_4:+70010777 | Msa0699370:CDS |
GTTCTGCAATTCTAGGAAGT+CGG | 0.585591 | 4_4:+70010056 | Msa0699370:CDS |
TATTACATCAAAACTTGAGA+GGG | 0.586875 | 4_4:-70010496 | None:intergenic |
AGACATGTGACCACTTGGCA+AGG | 0.587065 | 4_4:+70008893 | Msa0699370:CDS |
GTATGGATTCAAGAAAATGC+AGG | 0.588255 | 4_4:+70009830 | Msa0699370:CDS |
GCTGAACCGAAACAGTCAGC+AGG | 0.593232 | 4_4:-70009593 | None:intergenic |
TTCTAGCTGATTCATACTTG+GGG | 0.600462 | 4_4:+70008948 | Msa0699370:CDS |
TAGTCTCTTGTACGAGACAC+CGG | 0.603899 | 4_4:+70010027 | Msa0699370:CDS |
AGAAAGGGGAACCTGAAGAA+GGG | 0.604312 | 4_4:-70007840 | None:intergenic |
ATTGTGAAGGAGTGGCTGGA+GGG | 0.607188 | 4_4:-70009619 | None:intergenic |
TTATTACATCAAAACTTGAG+AGG | 0.610706 | 4_4:-70010497 | None:intergenic |
AATTACAATGAAATAAATTG+CGG | 0.612005 | 4_4:-70008996 | None:intergenic |
GGCAGCATATTGTGAAGGAG+TGG | 0.612387 | 4_4:-70009627 | None:intergenic |
AAGAAGGCAGCATATTGTGA+AGG | 0.613318 | 4_4:-70009632 | None:intergenic |
CCTGTAAATTTCCTTGCGAG+GGG | 0.624758 | 4_4:-70010561 | None:intergenic |
GCTAGAATAGCTCCAATGAG+TGG | 0.625100 | 4_4:-70008932 | None:intergenic |
AGCACTGCATAAACTCCGCA+TGG | 0.625368 | 4_4:-70010835 | None:intergenic |
TATTGTGAAGGAGTGGCTGG+AGG | 0.627137 | 4_4:-70009620 | None:intergenic |
GCGGCATTTGGTTGTCCCTG+AGG | 0.627957 | 4_4:+70010000 | Msa0699370:CDS |
GTTCGGTTGACTTTAAAGGG+AGG | 0.628201 | 4_4:+70008623 | Msa0699370:CDS |
CCCCAAGAAAGGGTTAAGAA+GGG | 0.632898 | 4_4:+70009743 | Msa0699370:CDS |
ATTCAAGAAAATGCAGGCTG+GGG | 0.634416 | 4_4:+70009836 | Msa0699370:CDS |
AGGTTATCTGGAATCCACCC+AGG | 0.636000 | 4_4:-70010945 | None:intergenic |
ATAACAAGTGCCTTGCCAAG+TGG | 0.645779 | 4_4:-70008903 | None:intergenic |
ACAAGAGACTACTATCCTCA+GGG | 0.646212 | 4_4:-70010015 | None:intergenic |
TCTGATGCTGATAGGAAAAG+CGG | 0.649943 | 4_4:+70010282 | Msa0699370:CDS |
AAATTTACAGGCAAAGAACG+AGG | 0.651776 | 4_4:+70010573 | Msa0699370:CDS |
GCCCCAAAAGACGACACACA+TGG | 0.665180 | 4_4:-70009698 | None:intergenic |
GCCCCAAATAAGAAATACTG+AGG | 0.668426 | 4_4:-70010753 | None:intergenic |
GTAACTCACTTCACTACACA+AGG | 0.671941 | 4_4:+70010915 | Msa0699370:CDS |
ACTCACTTCACTACACAAGG+TGG | 0.673462 | 4_4:+70010918 | Msa0699370:CDS |
ACTTTGCACTGTGACACAGG+TGG | 0.676355 | 4_4:+70010326 | Msa0699370:CDS |
ACCAATCTCCAGATGCCATG+CGG | 0.686556 | 4_4:+70010820 | Msa0699370:CDS |
CAGAAGTATTCACAAACGTG+GGG | 0.695368 | 4_4:+70010778 | Msa0699370:CDS |
ATTCCAGATAACCTGAACAA+AGG | 0.696262 | 4_4:+70010954 | Msa0699370:CDS |
TGTGGAACAAGGAACCATGA+TGG | 0.699385 | 4_4:+70010437 | Msa0699370:CDS |
CACAAGGTGGAAATCCTGGG+TGG | 0.700761 | 4_4:+70010931 | Msa0699370:CDS |
AAACTTGAGAGGGAAGCTGG+TGG | 0.700875 | 4_4:-70010486 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTTGAAAAAATATACTAAT+TGG | - | chr4_4:70010732-70010751 | None:intergenic | 10.0% |
!! | CAAAAATATTTGAAGAAAAA+AGG | - | chr4_4:70007871-70007890 | None:intergenic | 15.0% |
!!! | CTTTTTTCTTCAAATATTTT+TGG | + | chr4_4:70007869-70007888 | Msa0699370:intron | 15.0% |
!!! | AAGTTTCAAAAGTTTTAAAT+AGG | - | chr4_4:70008053-70008072 | None:intergenic | 15.0% |
!! | ATATAATCAACTAATAATCA+TGG | - | chr4_4:70008310-70008329 | None:intergenic | 15.0% |
!! | AAAAAAAAAAAAACTTACCT+AGG | - | chr4_4:70008696-70008715 | None:intergenic | 15.0% |
!! | AATTACAATGAAATAAATTG+CGG | - | chr4_4:70008999-70009018 | None:intergenic | 15.0% |
!!! | TTCCCATTTTAAAAAAATAT+AGG | + | chr4_4:70009392-70009411 | Msa0699370:intron | 15.0% |
!!! | TCCCATTTTAAAAAAATATA+GGG | + | chr4_4:70009393-70009412 | Msa0699370:intron | 15.0% |
!!! | ACCCTATATTTTTTTAAAAT+GGG | - | chr4_4:70009397-70009416 | None:intergenic | 15.0% |
!! | GTTTAATCAATTGAAATTCA+TGG | - | chr4_4:70007717-70007736 | None:intergenic | 20.0% |
!! | AGACTATGATAATAGTAATA+AGG | + | chr4_4:70007909-70007928 | Msa0699370:intron | 20.0% |
!!! | CTTTTAAGTTTCAAACTAAA+AGG | + | chr4_4:70008026-70008045 | Msa0699370:intron | 20.0% |
!!! | TAAAACTTTTGAAACTTAAG+AGG | + | chr4_4:70008056-70008075 | Msa0699370:intron | 20.0% |
!! | AAAATGACCTAATTAAAACT+TGG | + | chr4_4:70008104-70008123 | Msa0699370:intron | 20.0% |
!!! | AGAATTTCCAAGTTTTAATT+AGG | - | chr4_4:70008114-70008133 | None:intergenic | 20.0% |
!!! | TCTAGTTTGTCATTATTATT+AGG | - | chr4_4:70008170-70008189 | None:intergenic | 20.0% |
!! | ATGGTATAATAAATACTTAG+TGG | - | chr4_4:70008291-70008310 | None:intergenic | 20.0% |
!! | ATTATCCAGTATATATGAAA+GGG | - | chr4_4:70008423-70008442 | None:intergenic | 20.0% |
!! | AATTATCCAGTATATATGAA+AGG | - | chr4_4:70008424-70008443 | None:intergenic | 20.0% |
!! | AAACAGAGAATAATCAATAA+AGG | - | chr4_4:70008513-70008532 | None:intergenic | 20.0% |
!!! | CTGTTTTAATATTTAAGAAG+TGG | + | chr4_4:70008527-70008546 | Msa0699370:intron | 20.0% |
!! | GTAATTATTACAATCTGATA+AGG | + | chr4_4:70009013-70009032 | Msa0699370:intron | 20.0% |
!!! | GACCCTATATTTTTTTAAAA+TGG | - | chr4_4:70009398-70009417 | None:intergenic | 20.0% |
!! | AAAAATATAGGGTCAATATT+AGG | + | chr4_4:70009404-70009423 | Msa0699370:intron | 20.0% |
!!! | TTTTACTTTTCTATCAACAT+AGG | + | chr4_4:70009782-70009801 | Msa0699370:CDS | 20.0% |
!!! | TAATTTGTCTGAATAATAAC+TGG | + | chr4_4:70010120-70010139 | Msa0699370:intron | 20.0% |
!! | TAATAGACAATATCAAAAAG+AGG | - | chr4_4:70010190-70010209 | None:intergenic | 20.0% |
!!! | TTTTGATATTGTCTATTAAG+AGG | + | chr4_4:70010192-70010211 | Msa0699370:intron | 20.0% |
!! | TTTGATATTGTCTATTAAGA+GGG | + | chr4_4:70010193-70010212 | Msa0699370:intron | 20.0% |
!!! | AATGTCTATTGTTTTAATGA+AGG | + | chr4_4:70010235-70010254 | Msa0699370:intron | 20.0% |
!!! | ATGTAATAAGTGTTATTTTC+TGG | + | chr4_4:70010511-70010530 | Msa0699370:CDS | 20.0% |
!!! | TGTAATAAGTGTTATTTTCT+GGG | + | chr4_4:70010512-70010531 | Msa0699370:CDS | 20.0% |
!!! | TTTTTTCTTCTTGTACTTTT+TGG | - | chr4_4:70011051-70011070 | None:intergenic | 20.0% |
! | AAACATCAACAAATTCGAAA+AGG | + | chr4_4:70007733-70007752 | Msa0699370:five_prime_UTR | 25.0% |
!! | TTCTTCACAATTTTGTACAA+GGG | - | chr4_4:70007819-70007838 | None:intergenic | 25.0% |
!! | ATTCTTCACAATTTTGTACA+AGG | - | chr4_4:70007820-70007839 | None:intergenic | 25.0% |
! | TAAAACACTGTCAAACTAAA+AGG | - | chr4_4:70007952-70007971 | None:intergenic | 25.0% |
! | GAAACTTAAAAGACTAACTT+GGG | - | chr4_4:70008018-70008037 | None:intergenic | 25.0% |
! | TGAAACTTAAAAGACTAACT+TGG | - | chr4_4:70008019-70008038 | None:intergenic | 25.0% |
! | GATAATTGACTGAGTTAAAT+AGG | - | chr4_4:70008400-70008419 | None:intergenic | 25.0% |
! | TTATCCAGTATATATGAAAG+GGG | - | chr4_4:70008422-70008441 | None:intergenic | 25.0% |
!!! | ATTGGTTATTTTGTATCTGA+AGG | + | chr4_4:70008570-70008589 | Msa0699370:intron | 25.0% |
! | AAAAACTTACCTAGGATAAA+TGG | - | chr4_4:70008688-70008707 | None:intergenic | 25.0% |
!! | ATGCAATTTTTGTATCCATT+TGG | + | chr4_4:70009135-70009154 | Msa0699370:intron | 25.0% |
! | AAAAGAATTTGTACTCCAAA+TGG | - | chr4_4:70009153-70009172 | None:intergenic | 25.0% |
! | AGAAAAACATTAGAAAAGTG+AGG | + | chr4_4:70009217-70009236 | Msa0699370:intron | 25.0% |
! | GATCATAGTACATTCAAAAT+AGG | - | chr4_4:70009252-70009271 | None:intergenic | 25.0% |
! | CAGTGTTAAAAACTTCAATA+TGG | - | chr4_4:70009308-70009327 | None:intergenic | 25.0% |
!!! | TTATTTATGGGATTAGCTAT+AGG | + | chr4_4:70009881-70009900 | Msa0699370:CDS | 25.0% |
! | TGATACGAATATTTCCAATT+TGG | + | chr4_4:70010364-70010383 | Msa0699370:CDS | 25.0% |
! | GATACGAATATTTCCAATTT+GGG | + | chr4_4:70010365-70010384 | Msa0699370:CDS | 25.0% |
! | AACAGCATTAAAAACTATTC+CGG | - | chr4_4:70010394-70010413 | None:intergenic | 25.0% |
! | TATTACATCAAAACTTGAGA+GGG | - | chr4_4:70010499-70010518 | None:intergenic | 25.0% |
! | TTATTACATCAAAACTTGAG+AGG | - | chr4_4:70010500-70010519 | None:intergenic | 25.0% |
! | TGCTAAAGATTGAGATAAAA+AGG | - | chr4_4:70010629-70010648 | None:intergenic | 25.0% |
! | ATACCTCAGTATTTCTTATT+TGG | + | chr4_4:70010750-70010769 | Msa0699370:CDS | 25.0% |
!! | TACCTCAGTATTTCTTATTT+GGG | + | chr4_4:70010751-70010770 | Msa0699370:CDS | 25.0% |
!!! | GTCATCTTGATTATTTTTTC+TGG | + | chr4_4:70010976-70010995 | Msa0699370:CDS | 25.0% |
! | ACTTAGCTTCTTAAATATGT+TGG | + | chr4_4:70011010-70011029 | Msa0699370:CDS | 25.0% |
!! | AAAGCTTCTTAGTATTTTTC+AGG | + | chr4_4:70011068-70011087 | Msa0699370:exon | 25.0% |
AGAAAAAAGGTAGAGAGAAA+GGG | - | chr4_4:70007858-70007877 | None:intergenic | 30.0% | |
AAGAAAAAAGGTAGAGAGAA+AGG | - | chr4_4:70007859-70007878 | None:intergenic | 30.0% | |
AAAAGGACTAAAGTGGTATT+TGG | - | chr4_4:70007935-70007954 | None:intergenic | 30.0% | |
TCAAACTAAAAGGACTAAAG+TGG | - | chr4_4:70007942-70007961 | None:intergenic | 30.0% | |
GGAAATTCTGTCAAACTAAA+AGG | + | chr4_4:70008125-70008144 | Msa0699370:intron | 30.0% | |
AAGGACCAAAAGTTTGTATT+TGG | + | chr4_4:70008144-70008163 | Msa0699370:intron | 30.0% | |
! | TTAGGCCAAATACAAACTTT+TGG | - | chr4_4:70008152-70008171 | None:intergenic | 30.0% |
AGCAAAAACAAGCAATACTT+TGG | - | chr4_4:70008230-70008249 | None:intergenic | 30.0% | |
TTATCCCCTTTCATATATAC+TGG | + | chr4_4:70008415-70008434 | Msa0699370:intron | 30.0% | |
GTTGATCTTCAAGATTCAAA+TGG | + | chr4_4:70008460-70008479 | Msa0699370:intron | 30.0% | |
TATTGCTTGTGATGAACAAT+TGG | + | chr4_4:70008552-70008571 | Msa0699370:intron | 30.0% | |
TGATATGAAATACGAATCAC+AGG | + | chr4_4:70008773-70008792 | Msa0699370:intron | 30.0% | |
! | ATTTCCTTCATGTAGTTTGT+GGG | - | chr4_4:70008861-70008880 | None:intergenic | 30.0% |
! | TATTCTAGCTGATTCATACT+TGG | + | chr4_4:70008946-70008965 | Msa0699370:CDS | 30.0% |
! | ATTCTAGCTGATTCATACTT+GGG | + | chr4_4:70008947-70008966 | Msa0699370:CDS | 30.0% |
AATCGATTAGAGAATGATGA+AGG | + | chr4_4:70009187-70009206 | Msa0699370:intron | 30.0% | |
TTAGAGAATGATGAAGGATA+TGG | + | chr4_4:70009193-70009212 | Msa0699370:intron | 30.0% | |
!!! | TGCAATGGAAGGAAATTTTT+TGG | - | chr4_4:70009274-70009293 | None:intergenic | 30.0% |
AACAAAGCATAAGTAAGCAA+AGG | - | chr4_4:70009483-70009502 | None:intergenic | 30.0% | |
TCTTGTGTTAATCTGTAACA+AGG | + | chr4_4:70009512-70009531 | Msa0699370:intron | 30.0% | |
!! | AGAAGGGATCATTTTTCAAT+TGG | + | chr4_4:70009759-70009778 | Msa0699370:CDS | 30.0% |
!! | AATAAAAGTGCCTGATACAA+GGG | - | chr4_4:70009810-70009829 | None:intergenic | 30.0% |
! | TATCAGGCACTTTTATTGTA+TGG | + | chr4_4:70009813-70009832 | Msa0699370:CDS | 30.0% |
! | GGCATTCCTACTTTATTTAT+GGG | + | chr4_4:70009869-70009888 | Msa0699370:CDS | 30.0% |
GCTAATCCCATAAATAAAGT+AGG | - | chr4_4:70009878-70009897 | None:intergenic | 30.0% | |
!!! | TGGTTTTTGAAATCTGTAGA+GGG | - | chr4_4:70009927-70009946 | None:intergenic | 30.0% |
TCTACAGATTTCAAAAACCA+GGG | + | chr4_4:70009927-70009946 | Msa0699370:CDS | 30.0% | |
ACTTGGAACATTCTTGTAAT+AGG | - | chr4_4:70009959-70009978 | None:intergenic | 30.0% | |
! | ATAACTGGTTCAGTAATTGA+CGG | + | chr4_4:70010135-70010154 | Msa0699370:intron | 30.0% |
! | TTTTCAGAGTTGCAAAGAAT+GGG | + | chr4_4:70010597-70010616 | Msa0699370:CDS | 30.0% |
! | ACCTCAGTATTTCTTATTTG+GGG | + | chr4_4:70010752-70010771 | Msa0699370:CDS | 30.0% |
!!! | TATTTTTTCTGGCTTTTAGC+TGG | + | chr4_4:70010987-70011006 | Msa0699370:CDS | 30.0% |
GTACTTTCTTTCACATGTAA+AGG | + | chr4_4:70011183-70011202 | Msa0699370:intron | 30.0% | |
CATATCACAAGATGATGAAT+GGG | - | chr4_4:70011239-70011258 | None:intergenic | 30.0% | |
ACTCTCAACAGAGCTATATA+TGG | + | chr4_4:70007772-70007791 | Msa0699370:exon | 35.0% | |
CTCTCAACAGAGCTATATAT+GGG | + | chr4_4:70007773-70007792 | Msa0699370:exon | 35.0% | |
GAAAAAAGGTAGAGAGAAAG+GGG | - | chr4_4:70007857-70007876 | None:intergenic | 35.0% | |
TGACAAACTAGACTGTAACA+TGG | + | chr4_4:70008178-70008197 | Msa0699370:intron | 35.0% | |
! | CTTTGGAGACTGATTTACAA+TGG | - | chr4_4:70008213-70008232 | None:intergenic | 35.0% |
ATGAAACAAGTGAACAAGAG+GGG | - | chr4_4:70008372-70008391 | None:intergenic | 35.0% | |
GATGAAACAAGTGAACAAGA+GGG | - | chr4_4:70008373-70008392 | None:intergenic | 35.0% | |
!! | ATGGTTCGGTTGACTTTAAA+GGG | + | chr4_4:70008620-70008639 | Msa0699370:CDS | 35.0% |
AAAGCTTGTCCATTTATCCT+AGG | + | chr4_4:70008676-70008695 | Msa0699370:CDS | 35.0% | |
CATTTCCTTCATGTAGTTTG+TGG | - | chr4_4:70008862-70008881 | None:intergenic | 35.0% | |
TGTTATCTTACACCACTCAT+TGG | + | chr4_4:70008920-70008939 | Msa0699370:CDS | 35.0% | |
! | TTCTAGCTGATTCATACTTG+GGG | + | chr4_4:70008948-70008967 | Msa0699370:CDS | 35.0% |
AGTAGAATCAATGCAATGGA+AGG | - | chr4_4:70009285-70009304 | None:intergenic | 35.0% | |
ATGGAGTAGAATCAATGCAA+TGG | - | chr4_4:70009289-70009308 | None:intergenic | 35.0% | |
!! | TACATTGACTCTTTCTGCAT+CGG | + | chr4_4:70009556-70009575 | Msa0699370:CDS | 35.0% |
!! | CAATAAAAGTGCCTGATACA+AGG | - | chr4_4:70009811-70009830 | None:intergenic | 35.0% |
GTATGGATTCAAGAAAATGC+AGG | + | chr4_4:70009830-70009849 | Msa0699370:CDS | 35.0% | |
! | CGGCATTCCTACTTTATTTA+TGG | + | chr4_4:70009868-70009887 | Msa0699370:CDS | 35.0% |
! | GCTATAGGAAGCTTCTTTTT+AGG | + | chr4_4:70009896-70009915 | Msa0699370:CDS | 35.0% |
!!! | GGTTTTTGAAATCTGTAGAG+GGG | - | chr4_4:70009926-70009945 | None:intergenic | 35.0% |
!!! | CTGGTTTTTGAAATCTGTAG+AGG | - | chr4_4:70009928-70009947 | None:intergenic | 35.0% |
CTCTACAGATTTCAAAAACC+AGG | + | chr4_4:70009926-70009945 | Msa0699370:CDS | 35.0% | |
CTACAGATTTCAAAAACCAG+GGG | + | chr4_4:70009928-70009947 | Msa0699370:CDS | 35.0% | |
TACAGATTTCAAAAACCAGG+GGG | + | chr4_4:70009929-70009948 | Msa0699370:CDS | 35.0% | |
TACAAGAATGTTCCAAGTTG+TGG | + | chr4_4:70009961-70009980 | Msa0699370:CDS | 35.0% | |
! | AAGTTGTGGTAGCATCTTTT+CGG | + | chr4_4:70009975-70009994 | Msa0699370:CDS | 35.0% |
!! | GTGTTAAATCTTCTGAAGCA+AGG | - | chr4_4:70010168-70010187 | None:intergenic | 35.0% |
TCAACAATGTTTGTGGAACA+AGG | + | chr4_4:70010426-70010445 | Msa0699370:CDS | 35.0% | |
ACTATAATCCTGTCATAGAC+AGG | - | chr4_4:70010540-70010559 | None:intergenic | 35.0% | |
AAATTTACAGGCAAAGAACG+AGG | + | chr4_4:70010573-70010592 | Msa0699370:CDS | 35.0% | |
! | CTTTTCAGAGTTGCAAAGAA+TGG | + | chr4_4:70010596-70010615 | Msa0699370:CDS | 35.0% |
CAGCAACAGGTTTATCAATA+AGG | - | chr4_4:70010707-70010726 | None:intergenic | 35.0% | |
ATACTAATTGGTACAGCAAC+AGG | - | chr4_4:70010720-70010739 | None:intergenic | 35.0% | |
!! | GCACTTTTGACTACTTCATT+GGG | + | chr4_4:70010861-70010880 | Msa0699370:CDS | 35.0% |
!! | CACTTTTGACTACTTCATTG+GGG | + | chr4_4:70010862-70010881 | Msa0699370:CDS | 35.0% |
ATTCCAGATAACCTGAACAA+AGG | + | chr4_4:70010954-70010973 | Msa0699370:CDS | 35.0% | |
AATCAAGATGACCTTTGTTC+AGG | - | chr4_4:70010968-70010987 | None:intergenic | 35.0% | |
GCATATCACAAGATGATGAA+TGG | - | chr4_4:70011240-70011259 | None:intergenic | 35.0% | |
GCTATATATGGGTTCCATAG+AGG | + | chr4_4:70007784-70007803 | Msa0699370:exon | 40.0% | |
AAGGGATTCTTCTTCCTCTA+TGG | - | chr4_4:70007801-70007820 | None:intergenic | 40.0% | |
TTGTGAAGAATCCCTTCTTC+AGG | + | chr4_4:70007829-70007848 | Msa0699370:CDS | 40.0% | |
CGATGAAACAAGTGAACAAG+AGG | - | chr4_4:70008374-70008393 | None:intergenic | 40.0% | |
!! | GATGGTTCGGTTGACTTTAA+AGG | + | chr4_4:70008619-70008638 | Msa0699370:CDS | 40.0% |
TCAAGCAGAATACTGGCAAT+TGG | + | chr4_4:70008653-70008672 | Msa0699370:CDS | 40.0% | |
CAATGAATGTTGCGAACGTT+TGG | + | chr4_4:70008796-70008815 | Msa0699370:CDS | 40.0% | |
! | ATGTAGTTTGTGGGTGAGAT+AGG | - | chr4_4:70008852-70008871 | None:intergenic | 40.0% |
AAGCAAGATTGAGATGTGTG+TGG | - | chr4_4:70009065-70009084 | None:intergenic | 40.0% | |
TCTCAATCTTGCTTTAGTGC+TGG | + | chr4_4:70009071-70009090 | Msa0699370:intron | 40.0% | |
ATGCAAAGATGAGATGTGTG+TGG | - | chr4_4:70009114-70009133 | None:intergenic | 40.0% | |
GGGTCAATATTAGGAACAGT+TGG | + | chr4_4:70009413-70009432 | Msa0699370:intron | 40.0% | |
! | TAACAAGGCTGTTTCATGCA+GGG | + | chr4_4:70009527-70009546 | Msa0699370:intron | 40.0% |
! | TTGAAACCTGCTGACTGTTT+CGG | + | chr4_4:70009587-70009606 | Msa0699370:CDS | 40.0% |
AAGAAGGCAGCATATTGTGA+AGG | - | chr4_4:70009635-70009654 | None:intergenic | 40.0% | |
CAATATGCTGCCTTCTTCTT+TGG | + | chr4_4:70009638-70009657 | Msa0699370:CDS | 40.0% | |
! | AAACCATGTGTGTCGTCTTT+TGG | + | chr4_4:70009695-70009714 | Msa0699370:CDS | 40.0% |
! | AACCATGTGTGTCGTCTTTT+GGG | + | chr4_4:70009696-70009715 | Msa0699370:CDS | 40.0% |
ATGATACTGATCCCCAAGAA+AGG | + | chr4_4:70009732-70009751 | Msa0699370:CDS | 40.0% | |
TGATACTGATCCCCAAGAAA+GGG | + | chr4_4:70009733-70009752 | Msa0699370:CDS | 40.0% | |
TCCCTTCTTAACCCTTTCTT+GGG | - | chr4_4:70009747-70009766 | None:intergenic | 40.0% | |
ATCCCTTCTTAACCCTTTCT+TGG | - | chr4_4:70009748-70009767 | None:intergenic | 40.0% | |
GATTCAAGAAAATGCAGGCT+GGG | + | chr4_4:70009835-70009854 | Msa0699370:CDS | 40.0% | |
ATTCAAGAAAATGCAGGCTG+GGG | + | chr4_4:70009836-70009855 | Msa0699370:CDS | 40.0% | |
GAAAAGATGCTACCACAACT+TGG | - | chr4_4:70009976-70009995 | None:intergenic | 40.0% | |
ACAAGAGACTACTATCCTCA+GGG | - | chr4_4:70010018-70010037 | None:intergenic | 40.0% | |
TACAAGAGACTACTATCCTC+AGG | - | chr4_4:70010019-70010038 | None:intergenic | 40.0% | |
AGAATTGCAGAACTCTTGTC+CGG | - | chr4_4:70010049-70010068 | None:intergenic | 40.0% | |
GACAAGAGTTCTGCAATTCT+AGG | + | chr4_4:70010049-70010068 | Msa0699370:CDS | 40.0% | |
! | GTTCTGCAATTCTAGGAAGT+CGG | + | chr4_4:70010056-70010075 | Msa0699370:CDS | 40.0% |
! | AATTCTAGGAAGTCGGAAAC+TGG | + | chr4_4:70010063-70010082 | Msa0699370:CDS | 40.0% |
TGGAGCATAGTGATGAACTA+AGG | + | chr4_4:70010083-70010102 | Msa0699370:CDS | 40.0% | |
CTATAGTGTCTGATGCTGAT+AGG | + | chr4_4:70010274-70010293 | Msa0699370:CDS | 40.0% | |
TCTGATGCTGATAGGAAAAG+CGG | + | chr4_4:70010282-70010301 | Msa0699370:CDS | 40.0% | |
ATATTTCCAATTTGGGCTGC+CGG | + | chr4_4:70010372-70010391 | Msa0699370:CDS | 40.0% | |
CACAAACATTGTTGACAGCT+GGG | - | chr4_4:70010421-70010440 | None:intergenic | 40.0% | |
!! | ACCATGATGGACACAAGTAT+TGG | + | chr4_4:70010450-70010469 | Msa0699370:CDS | 40.0% |
ACCAATACTTGTGTCCATCA+TGG | - | chr4_4:70010454-70010473 | None:intergenic | 40.0% | |
GAGTTGCAAAGAATGGGAAT+TGG | + | chr4_4:70010603-70010622 | Msa0699370:CDS | 40.0% | |
GCCCCAAATAAGAAATACTG+AGG | - | chr4_4:70010756-70010775 | None:intergenic | 40.0% | |
!! | AGCAGAAGTATTCACAAACG+TGG | + | chr4_4:70010776-70010795 | Msa0699370:CDS | 40.0% |
!! | GCAGAAGTATTCACAAACGT+GGG | + | chr4_4:70010777-70010796 | Msa0699370:CDS | 40.0% |
!! | CAGAAGTATTCACAAACGTG+GGG | + | chr4_4:70010778-70010797 | Msa0699370:CDS | 40.0% |
!! | GGCACTTTTGACTACTTCAT+TGG | + | chr4_4:70010860-70010879 | Msa0699370:CDS | 40.0% |
GTAACTCACTTCACTACACA+AGG | + | chr4_4:70010915-70010934 | Msa0699370:CDS | 40.0% | |
! | TGACCTTTGTTCAGGTTATC+TGG | - | chr4_4:70010960-70010979 | None:intergenic | 40.0% |
!! | TCAGGCATTGATTAAGAGTG+TGG | + | chr4_4:70011086-70011105 | Msa0699370:three_prime_UTR | 40.0% |
AGGAGAATATGTGTTATGCC+CGG | + | chr4_4:70011203-70011222 | Msa0699370:intron | 40.0% | |
AGAAAGGGGAACCTGAAGAA+GGG | - | chr4_4:70007843-70007862 | None:intergenic | 45.0% | |
ATCTGAAGGATGAAGAGAGC+AGG | + | chr4_4:70008584-70008603 | Msa0699370:intron | 45.0% | |
AAAGTCAACCGAACCATCTC+CGG | - | chr4_4:70008617-70008636 | None:intergenic | 45.0% | |
! | GTTCGGTTGACTTTAAAGGG+AGG | + | chr4_4:70008623-70008642 | Msa0699370:CDS | 45.0% |
CCAGTATTCTGCTTGAGAAC+AGG | - | chr4_4:70008649-70008668 | None:intergenic | 45.0% | |
CCTGTTCTCAAGCAGAATAC+TGG | + | chr4_4:70008646-70008665 | Msa0699370:CDS | 45.0% | |
TGCGAACGTTTGGCATACTA+TGG | + | chr4_4:70008806-70008825 | Msa0699370:CDS | 45.0% | |
CTCACCCACAAACTACATGA+AGG | + | chr4_4:70008854-70008873 | Msa0699370:CDS | 45.0% | |
ATAACAAGTGCCTTGCCAAG+TGG | - | chr4_4:70008906-70008925 | None:intergenic | 45.0% | |
GCTAGAATAGCTCCAATGAG+TGG | - | chr4_4:70008935-70008954 | None:intergenic | 45.0% | |
ATTCATACTTGGGGCGATAC+TGG | + | chr4_4:70008957-70008976 | Msa0699370:CDS | 45.0% | |
! | GTAACAAGGCTGTTTCATGC+AGG | + | chr4_4:70009526-70009545 | Msa0699370:intron | 45.0% |
CAGGTAGAGACCAAAGAAGA+AGG | - | chr4_4:70009651-70009670 | None:intergenic | 45.0% | |
GTCTCTACCTGATTGCACTT+GGG | + | chr4_4:70009660-70009679 | Msa0699370:CDS | 45.0% | |
! | ACCATGTGTGTCGTCTTTTG+GGG | + | chr4_4:70009697-70009716 | Msa0699370:CDS | 45.0% |
TCCCCAAGAAAGGGTTAAGA+AGG | + | chr4_4:70009742-70009761 | Msa0699370:CDS | 45.0% | |
CCCTTCTTAACCCTTTCTTG+GGG | - | chr4_4:70009746-70009765 | None:intergenic | 45.0% | |
CCCCAAGAAAGGGTTAAGAA+GGG | + | chr4_4:70009743-70009762 | Msa0699370:CDS | 45.0% | |
AACATAGGAGCCCTTGTATC+AGG | + | chr4_4:70009797-70009816 | Msa0699370:CDS | 45.0% | |
GGATTCAAGAAAATGCAGGC+TGG | + | chr4_4:70009834-70009853 | Msa0699370:CDS | 45.0% | |
! | TGGTAGCATCTTTTCGGAAG+CGG | + | chr4_4:70009981-70010000 | Msa0699370:CDS | 45.0% |
! | ATCTTTTCGGAAGCGGCATT+TGG | + | chr4_4:70009988-70010007 | Msa0699370:CDS | 45.0% |
TAGTCTCTTGTACGAGACAC+CGG | + | chr4_4:70010027-70010046 | Msa0699370:CDS | 45.0% | |
GCGGCGACTATTCTAATTTG+TGG | + | chr4_4:70010301-70010320 | Msa0699370:CDS | 45.0% | |
CCACAAACATTGTTGACAGC+TGG | - | chr4_4:70010422-70010441 | None:intergenic | 45.0% | |
CCAGCTGTCAACAATGTTTG+TGG | + | chr4_4:70010419-70010438 | Msa0699370:CDS | 45.0% | |
TGTGGAACAAGGAACCATGA+TGG | + | chr4_4:70010437-70010456 | Msa0699370:CDS | 45.0% | |
TCAAAACTTGAGAGGGAAGC+TGG | - | chr4_4:70010492-70010511 | None:intergenic | 45.0% | |
CCTGTAAATTTCCTTGCGAG+GGG | - | chr4_4:70010564-70010583 | None:intergenic | 45.0% | |
GCCTGTAAATTTCCTTGCGA+GGG | - | chr4_4:70010565-70010584 | None:intergenic | 45.0% | |
TGCCTGTAAATTTCCTTGCG+AGG | - | chr4_4:70010566-70010585 | None:intergenic | 45.0% | |
ACTCACTTCACTACACAAGG+TGG | + | chr4_4:70010918-70010937 | Msa0699370:CDS | 45.0% | |
ACTACACAAGGTGGAAATCC+TGG | + | chr4_4:70010927-70010946 | Msa0699370:CDS | 45.0% | |
CTACACAAGGTGGAAATCCT+GGG | + | chr4_4:70010928-70010947 | Msa0699370:CDS | 45.0% | |
GGAGAATATGTGTTATGCCC+GGG | + | chr4_4:70011204-70011223 | Msa0699370:intron | 45.0% | |
!!! | ATGAATGGGCTGATTTTGCC+CGG | - | chr4_4:70011225-70011244 | None:intergenic | 45.0% |
GAGAAAGGGGAACCTGAAGA+AGG | - | chr4_4:70007844-70007863 | None:intergenic | 50.0% | |
CTGCAAGACATGTGACCACT+TGG | + | chr4_4:70008888-70008907 | Msa0699370:CDS | 50.0% | |
AGACATGTGACCACTTGGCA+AGG | + | chr4_4:70008893-70008912 | Msa0699370:CDS | 50.0% | |
!! | GACTCTTTCTGCATCGGTTC+CGG | + | chr4_4:70009562-70009581 | Msa0699370:CDS | 50.0% |
CAGTCAGCAGGTTTCAATGC+CGG | - | chr4_4:70009584-70009603 | None:intergenic | 50.0% | |
ATTGTGAAGGAGTGGCTGGA+GGG | - | chr4_4:70009622-70009641 | None:intergenic | 50.0% | |
TATTGTGAAGGAGTGGCTGG+AGG | - | chr4_4:70009623-70009642 | None:intergenic | 50.0% | |
GCATATTGTGAAGGAGTGGC+TGG | - | chr4_4:70009626-70009645 | None:intergenic | 50.0% | |
GGCAGCATATTGTGAAGGAG+TGG | - | chr4_4:70009630-70009649 | None:intergenic | 50.0% | |
GGTCTCTACCTGATTGCACT+TGG | + | chr4_4:70009659-70009678 | Msa0699370:CDS | 50.0% | |
TACCTGATTGCACTTGGGAC+TGG | + | chr4_4:70009665-70009684 | Msa0699370:CDS | 50.0% | |
GAAAATGCAGGCTGGGGTAT+TGG | + | chr4_4:70009842-70009861 | Msa0699370:CDS | 50.0% | |
CTTGTAATAGGACTTCCCCC+TGG | - | chr4_4:70009947-70009966 | None:intergenic | 50.0% | |
GAGACTTTGCACTGTGACAC+AGG | + | chr4_4:70010323-70010342 | Msa0699370:CDS | 50.0% | |
ACTTTGCACTGTGACACAGG+TGG | + | chr4_4:70010326-70010345 | Msa0699370:CDS | 50.0% | |
ACTATTCCGGCAGCCCAAAT+TGG | - | chr4_4:70010381-70010400 | None:intergenic | 50.0% | |
AAACTTGAGAGGGAAGCTGG+TGG | - | chr4_4:70010489-70010508 | None:intergenic | 50.0% | |
TCTGGGTTCCTGTCTATGAC+AGG | + | chr4_4:70010529-70010548 | Msa0699370:CDS | 50.0% | |
GGATTATAGTTCCCCTCGCA+AGG | + | chr4_4:70010550-70010569 | Msa0699370:CDS | 50.0% | |
CCCCTCGCAAGGAAATTTAC+AGG | + | chr4_4:70010561-70010580 | Msa0699370:CDS | 50.0% | |
ACCAATCTCCAGATGCCATG+CGG | + | chr4_4:70010820-70010839 | Msa0699370:CDS | 50.0% | |
CATAAACTCCGCATGGCATC+TGG | - | chr4_4:70010831-70010850 | None:intergenic | 50.0% | |
AGCACTGCATAAACTCCGCA+TGG | - | chr4_4:70010838-70010857 | None:intergenic | 50.0% | |
GCGGAGTTTATGCAGTGCTT+TGG | + | chr4_4:70010839-70010858 | Msa0699370:CDS | 50.0% | |
! | AGGTTATCTGGAATCCACCC+AGG | - | chr4_4:70010948-70010967 | None:intergenic | 50.0% |
!!! | TGAATGGGCTGATTTTGCCC+GGG | - | chr4_4:70011224-70011243 | None:intergenic | 50.0% |
GAAGAGAGCAGGCGATACAC+CGG | + | chr4_4:70008595-70008614 | Msa0699370:CDS | 55.0% | |
GCGATACACCGGAGATGGTT+CGG | + | chr4_4:70008606-70008625 | Msa0699370:CDS | 55.0% | |
GCTGAACCGAAACAGTCAGC+AGG | - | chr4_4:70009596-70009615 | None:intergenic | 55.0% | |
CACCAGTCCCAAGTGCAATC+AGG | - | chr4_4:70009670-70009689 | None:intergenic | 55.0% | |
CTGATTGCACTTGGGACTGG+TGG | + | chr4_4:70009668-70009687 | Msa0699370:CDS | 55.0% | |
GCCCCAAAAGACGACACACA+TGG | - | chr4_4:70009701-70009720 | None:intergenic | 55.0% | |
!! | GCAGGCTGGGGTATTGGATT+CGG | + | chr4_4:70009848-70009867 | Msa0699370:CDS | 55.0% |
TTGCACTGTGACACAGGTGG+AGG | + | chr4_4:70010329-70010348 | Msa0699370:CDS | 55.0% | |
TCCGCATGGCATCTGGAGAT+TGG | - | chr4_4:70010824-70010843 | None:intergenic | 55.0% | |
CACAAGGTGGAAATCCTGGG+TGG | + | chr4_4:70010931-70010950 | Msa0699370:CDS | 55.0% | |
AGCAGGCGATACACCGGAGA+TGG | + | chr4_4:70008601-70008620 | Msa0699370:CDS | 60.0% | |
GCGGCATTTGGTTGTCCCTG+AGG | + | chr4_4:70010000-70010019 | Msa0699370:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_4 | gene | 70007713 | 70011270 | 70007713 | ID=Msa0699370;Name=Msa0699370 |
chr4_4 | mRNA | 70007713 | 70011270 | 70007713 | ID=Msa0699370-mRNA-1;Parent=Msa0699370;Name=Msa0699370-mRNA-1;_AED=0.07;_eAED=0.07;_QI=78|1|1|1|0.8|0.66|6|160|587 |
chr4_4 | exon | 70007713 | 70007850 | 70007713 | ID=Msa0699370-mRNA-1:exon:21095;Parent=Msa0699370-mRNA-1 |
chr4_4 | exon | 70008592 | 70008697 | 70008592 | ID=Msa0699370-mRNA-1:exon:21096;Parent=Msa0699370-mRNA-1 |
chr4_4 | exon | 70008795 | 70009012 | 70008795 | ID=Msa0699370-mRNA-1:exon:21097;Parent=Msa0699370-mRNA-1 |
chr4_4 | exon | 70009548 | 70010104 | 70009548 | ID=Msa0699370-mRNA-1:exon:21098;Parent=Msa0699370-mRNA-1 |
chr4_4 | exon | 70010257 | 70011198 | 70010257 | ID=Msa0699370-mRNA-1:exon:21099;Parent=Msa0699370-mRNA-1 |
chr4_4 | exon | 70011230 | 70011270 | 70011230 | ID=Msa0699370-mRNA-1:exon:21100;Parent=Msa0699370-mRNA-1 |
chr4_4 | five_prime_UTR | 70007713 | 70007790 | 70007713 | ID=Msa0699370-mRNA-1:five_prime_utr;Parent=Msa0699370-mRNA-1 |
chr4_4 | CDS | 70007791 | 70007850 | 70007791 | ID=Msa0699370-mRNA-1:cds;Parent=Msa0699370-mRNA-1 |
chr4_4 | CDS | 70008592 | 70008697 | 70008592 | ID=Msa0699370-mRNA-1:cds;Parent=Msa0699370-mRNA-1 |
chr4_4 | CDS | 70008795 | 70009012 | 70008795 | ID=Msa0699370-mRNA-1:cds;Parent=Msa0699370-mRNA-1 |
chr4_4 | CDS | 70009548 | 70010104 | 70009548 | ID=Msa0699370-mRNA-1:cds;Parent=Msa0699370-mRNA-1 |
chr4_4 | CDS | 70010257 | 70011079 | 70010257 | ID=Msa0699370-mRNA-1:cds;Parent=Msa0699370-mRNA-1 |
chr4_4 | three_prime_UTR | 70011080 | 70011198 | 70011080 | ID=Msa0699370-mRNA-1:three_prime_utr;Parent=Msa0699370-mRNA-1 |
chr4_4 | three_prime_UTR | 70011230 | 70011270 | 70011230 | ID=Msa0699370-mRNA-1:three_prime_utr;Parent=Msa0699370-mRNA-1 |
Gene Sequence |
Protein sequence |